View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3941_low_49 (Length: 249)

Name: NF3941_low_49
Description: NF3941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3941_low_49
NF3941_low_49
[»] chr2 (47 HSPs)
chr2 (134-231)||(11727338-11727435)
chr2 (113-231)||(7086258-7086376)
chr2 (113-231)||(26206298-26206415)
chr2 (137-231)||(8234788-8234882)
chr2 (1-50)||(26206244-26206293)
chr2 (113-232)||(9547099-9547218)
chr2 (113-232)||(32891285-32891404)
chr2 (137-231)||(580779-580873)
chr2 (137-231)||(2114431-2114525)
chr2 (137-231)||(20122471-20122565)
chr2 (134-231)||(17239906-17240003)
chr2 (113-226)||(22538549-22538662)
chr2 (113-229)||(39726407-39726522)
chr2 (113-221)||(44422122-44422230)
chr2 (113-225)||(45523676-45523788)
chr2 (140-231)||(10262744-10262835)
chr2 (113-231)||(11133080-11133199)
chr2 (137-204)||(11837021-11837088)
chr2 (113-232)||(18386784-18386903)
chr2 (137-231)||(16973913-16974007)
chr2 (137-231)||(30474191-30474285)
chr2 (114-183)||(20684017-20684086)
chr2 (155-232)||(43200844-43200921)
chr2 (137-229)||(1836595-1836687)
chr2 (114-231)||(12206503-12206622)
chr2 (111-183)||(19905625-19905697)
chr2 (113-231)||(34034355-34034473)
chr2 (113-231)||(31956871-31956990)
chr2 (154-229)||(36520793-36520868)
chr2 (137-183)||(3037618-3037664)
chr2 (137-231)||(17154654-17154748)
chr2 (137-231)||(22297448-22297542)
chr2 (113-167)||(26806161-26806215)
chr2 (134-183)||(34018063-34018112)
chr2 (137-230)||(44721700-44721793)
chr2 (134-183)||(33124356-33124407)
chr2 (113-176)||(29664663-29664726)
chr2 (140-229)||(2304296-2304385)
chr2 (145-183)||(9520861-9520899)
chr2 (137-183)||(9796950-9796996)
chr2 (113-171)||(32943404-32943462)
chr2 (113-183)||(41195914-41195984)
chr2 (113-183)||(41535242-41535312)
chr2 (114-171)||(14483630-14483687)
chr2 (134-231)||(20533762-20533859)
chr2 (137-230)||(36665436-36665529)
chr2 (140-231)||(29034980-29035071)
[»] chr1 (53 HSPs)
chr1 (113-232)||(37733759-37733878)
chr1 (113-231)||(19793531-19793649)
chr1 (137-231)||(15774308-15774402)
chr1 (113-184)||(35593815-35593886)
chr1 (113-231)||(38019919-38020038)
chr1 (137-231)||(4354101-4354195)
chr1 (134-231)||(49251388-49251485)
chr1 (112-231)||(18923856-18923975)
chr1 (137-231)||(538325-538419)
chr1 (113-183)||(749559-749628)
chr1 (137-183)||(1031640-1031686)
chr1 (137-231)||(3532970-3533063)
chr1 (111-229)||(15368812-15368930)
chr1 (113-231)||(21884580-21884698)
chr1 (113-231)||(23463958-23464076)
chr1 (113-231)||(24636729-24636847)
chr1 (137-231)||(27745162-27745256)
chr1 (110-176)||(30632353-30632419)
chr1 (113-231)||(43555846-43555964)
chr1 (113-231)||(9527430-9527549)
chr1 (113-231)||(4429454-4429572)
chr1 (113-171)||(4616938-4616996)
chr1 (137-231)||(8364404-8364498)
chr1 (137-183)||(11405509-11405555)
chr1 (113-183)||(34560310-34560380)
chr1 (137-231)||(42831952-42832046)
chr1 (113-183)||(46116146-46116216)
chr1 (113-183)||(1721193-1721265)
chr1 (113-231)||(9769550-9769670)
chr1 (113-183)||(50177223-50177295)
chr1 (113-232)||(17871053-17871170)
chr1 (140-231)||(38021256-38021347)
chr1 (140-183)||(2350375-2350417)
chr1 (137-232)||(11213445-11213540)
chr1 (116-231)||(12073052-12073167)
chr1 (140-230)||(17350066-17350156)
chr1 (113-171)||(6014490-6014548)
chr1 (137-231)||(23930540-23930634)
chr1 (137-231)||(24661987-24662081)
chr1 (137-183)||(30649146-30649192)
chr1 (137-183)||(32711140-32711186)
chr1 (113-231)||(37490895-37491013)
chr1 (137-183)||(39433411-39433457)
chr1 (113-183)||(47939171-47939241)
chr1 (113-230)||(24014580-24014697)
chr1 (155-231)||(29491474-29491551)
chr1 (138-183)||(39434671-39434716)
chr1 (151-231)||(24168589-24168669)
chr1 (140-231)||(25819189-25819280)
chr1 (137-206)||(31965542-31965613)
chr1 (140-231)||(39238720-39238811)
chr1 (140-231)||(40678827-40678918)
chr1 (137-165)||(50755415-50755443)
[»] chr4 (64 HSPs)
chr4 (113-231)||(3442848-3442966)
chr4 (113-231)||(17859783-17859901)
chr4 (113-231)||(20753097-20753215)
chr4 (113-231)||(3465588-3465706)
chr4 (137-231)||(47017942-47018036)
chr4 (134-206)||(43336991-43337063)
chr4 (137-228)||(1297861-1297952)
chr4 (137-232)||(6053984-6054079)
chr4 (113-232)||(10098129-10098248)
chr4 (137-231)||(36008279-36008374)
chr4 (137-231)||(32885693-32885787)
chr4 (134-231)||(12856189-12856286)
chr4 (113-230)||(31601812-31601929)
chr4 (134-231)||(45350281-45350378)
chr4 (134-231)||(45359760-45359857)
chr4 (113-232)||(31480274-31480394)
chr4 (137-216)||(37032175-37032254)
chr4 (113-184)||(41943959-41944030)
chr4 (137-232)||(53697976-53698071)
chr4 (135-232)||(23661351-23661449)
chr4 (113-183)||(36576317-36576387)
chr4 (113-231)||(49280641-49280759)
chr4 (113-231)||(52560769-52560887)
chr4 (134-183)||(28221300-28221349)
chr4 (135-232)||(38433315-38433412)
chr4 (140-225)||(43115279-43115364)
chr4 (137-231)||(5430360-5430455)
chr4 (113-183)||(4045040-4045110)
chr4 (137-183)||(6637718-6637764)
chr4 (137-231)||(24234070-24234164)
chr4 (113-183)||(37274633-37274703)
chr4 (137-183)||(52587335-52587381)
chr4 (113-231)||(55656080-55656198)
chr4 (113-231)||(56546421-56546539)
chr4 (135-231)||(9084763-9084860)
chr4 (135-184)||(22478734-22478783)
chr4 (113-221)||(23376199-23376307)
chr4 (113-178)||(30152172-30152237)
chr4 (140-231)||(8690218-8690309)
chr4 (140-231)||(14149797-14149888)
chr4 (140-231)||(28520731-28520822)
chr4 (113-231)||(40150477-40150596)
chr4 (111-183)||(43327295-43327367)
chr4 (148-228)||(51077875-51077955)
chr4 (128-183)||(10757762-10757817)
chr4 (128-183)||(10970933-10970988)
chr4 (137-231)||(12820401-12820496)
chr4 (140-183)||(15021478-15021521)
chr4 (140-231)||(29269314-29269404)
chr4 (113-184)||(31578069-31578140)
chr4 (140-183)||(43143773-43143816)
chr4 (113-183)||(6082843-6082913)
chr4 (129-183)||(11039924-11039978)
chr4 (134-184)||(34684620-34684670)
chr4 (137-183)||(34773679-34773725)
chr4 (137-183)||(36257747-36257793)
chr4 (113-183)||(54304901-54304971)
chr4 (113-162)||(42395634-42395683)
chr4 (113-183)||(54854149-54854221)
chr4 (129-165)||(534752-534788)
chr4 (140-231)||(9692966-9693057)
chr4 (140-231)||(42411453-42411545)
chr4 (140-231)||(48968210-48968301)
chr4 (151-231)||(52608578-52608657)
[»] chr8 (47 HSPs)
chr8 (134-231)||(42688061-42688158)
chr8 (134-231)||(15042358-15042455)
chr8 (113-231)||(9524962-9525080)
chr8 (113-231)||(24608455-24608573)
chr8 (134-231)||(5184880-5184977)
chr8 (111-231)||(25689358-25689478)
chr8 (113-232)||(17987421-17987540)
chr8 (114-180)||(23239180-23239246)
chr8 (113-231)||(43468677-43468795)
chr8 (113-230)||(4798513-4798630)
chr8 (111-183)||(36359688-36359760)
chr8 (113-232)||(27822074-27822193)
chr8 (113-231)||(7649534-7649651)
chr8 (113-231)||(10970271-10970389)
chr8 (113-231)||(13762484-13762602)
chr8 (137-231)||(26703886-26703980)
chr8 (113-183)||(30542817-30542887)
chr8 (137-226)||(10199738-10199827)
chr8 (134-231)||(39484363-39484460)
chr8 (137-229)||(44070364-44070456)
chr8 (134-229)||(1032954-1033048)
chr8 (140-231)||(9737359-9737450)
chr8 (137-228)||(24074514-24074605)
chr8 (113-183)||(6978873-6978943)
chr8 (113-179)||(10309632-10309698)
chr8 (113-183)||(14683929-14683999)
chr8 (113-175)||(23964715-23964777)
chr8 (113-183)||(25139859-25139929)
chr8 (137-183)||(34073235-34073281)
chr8 (140-231)||(2800023-2800114)
chr8 (113-229)||(27558843-27558958)
chr8 (113-232)||(28378816-28378936)
chr8 (140-216)||(30942598-30942674)
chr8 (159-231)||(43847707-43847779)
chr8 (116-183)||(3379623-3379689)
chr8 (148-183)||(8034583-8034618)
chr8 (113-216)||(10184773-10184876)
chr8 (129-180)||(11823018-11823069)
chr8 (134-184)||(18030707-18030758)
chr8 (116-231)||(27868711-27868826)
chr8 (113-184)||(37154566-37154637)
chr8 (137-183)||(14010768-14010814)
chr8 (137-183)||(33570425-33570471)
chr8 (113-183)||(33982243-33982313)
chr8 (116-231)||(40249853-40249970)
chr8 (140-231)||(2696537-2696628)
chr8 (135-171)||(43874971-43875007)
[»] chr6 (40 HSPs)
chr6 (113-231)||(12089102-12089220)
chr6 (113-231)||(12127881-12127999)
chr6 (113-231)||(22389722-22389840)
chr6 (113-231)||(9491707-9491825)
chr6 (113-231)||(15126248-15126365)
chr6 (113-231)||(20716364-20716482)
chr6 (137-231)||(35190768-35190862)
chr6 (113-230)||(10377096-10377213)
chr6 (113-231)||(22501023-22501142)
chr6 (113-231)||(8233091-8233209)
chr6 (137-231)||(18631477-18631571)
chr6 (137-224)||(12101898-12101985)
chr6 (113-231)||(22850816-22850934)
chr6 (113-226)||(9438312-9438425)
chr6 (113-221)||(753284-753392)
chr6 (111-231)||(6025357-6025476)
chr6 (113-229)||(19165358-19165473)
chr6 (113-184)||(3591301-3591372)
chr6 (137-216)||(6270605-6270684)
chr6 (113-180)||(30566114-30566181)
chr6 (113-183)||(7720475-7720545)
chr6 (113-183)||(9424497-9424566)
chr6 (137-230)||(12311397-12311491)
chr6 (134-216)||(22983600-22983682)
chr6 (134-216)||(23804726-23804808)
chr6 (137-183)||(25020524-25020570)
chr6 (137-231)||(34365740-34365834)
chr6 (113-231)||(34396088-34396206)
chr6 (137-226)||(18904679-18904768)
chr6 (146-183)||(20568262-20568299)
chr6 (140-231)||(29284122-29284213)
chr6 (113-216)||(2970209-2970312)
chr6 (137-183)||(3448405-3448451)
chr6 (137-231)||(5288341-5288435)
chr6 (113-171)||(6530176-6530234)
chr6 (137-183)||(16251519-16251565)
chr6 (155-231)||(6143969-6144045)
chr6 (113-171)||(17347319-17347379)
chr6 (117-165)||(5678193-5678241)
chr6 (140-231)||(14981702-14981793)
[»] chr3 (50 HSPs)
chr3 (137-231)||(49639033-49639127)
chr3 (119-230)||(13539942-13540053)
chr3 (113-230)||(20244140-20244257)
chr3 (113-231)||(36331698-36331817)
chr3 (137-231)||(335026-335120)
chr3 (137-231)||(33206762-33206856)
chr3 (113-223)||(45713493-45713603)
chr3 (113-184)||(18201449-18201520)
chr3 (137-232)||(43566792-43566887)
chr3 (137-231)||(47191377-47191472)
chr3 (137-231)||(14417873-14417967)
chr3 (129-183)||(24537880-24537934)
chr3 (137-183)||(32508790-32508836)
chr3 (113-231)||(35483274-35483392)
chr3 (113-230)||(43774190-43774308)
chr3 (137-231)||(48173291-48173385)
chr3 (137-226)||(49146094-49146183)
chr3 (140-231)||(10959137-10959228)
chr3 (136-183)||(2732716-2732763)
chr3 (136-231)||(16277946-16278041)
chr3 (108-231)||(17439932-17440055)
chr3 (113-196)||(50144578-50144661)
chr3 (137-183)||(8175813-8175859)
chr3 (113-183)||(14271899-14271969)
chr3 (142-231)||(14868689-14868778)
chr3 (137-231)||(20623773-20623867)
chr3 (113-183)||(31698586-31698656)
chr3 (113-179)||(34344750-34344816)
chr3 (137-231)||(42271009-42271103)
chr3 (137-183)||(46328920-46328966)
chr3 (113-183)||(50724420-50724490)
chr3 (113-183)||(50788358-50788428)
chr3 (113-183)||(54983677-54983747)
chr3 (134-183)||(16006499-16006548)
chr3 (134-183)||(30157055-30157104)
chr3 (137-206)||(35477761-35477830)
chr3 (134-231)||(38682251-38682348)
chr3 (134-231)||(49019188-49019285)
chr3 (140-231)||(9624987-9625078)
chr3 (140-231)||(27183681-27183772)
chr3 (115-183)||(37059500-37059568)
chr3 (137-216)||(48516083-48516162)
chr3 (137-183)||(3955361-3955407)
chr3 (137-183)||(27066663-27066709)
chr3 (117-183)||(48821017-48821083)
chr3 (113-231)||(53870839-53870957)
chr3 (139-231)||(36476363-36476455)
chr3 (134-183)||(28951919-28951970)
chr3 (152-232)||(32080059-32080139)
chr3 (115-183)||(44953135-44953203)
[»] chr7 (42 HSPs)
chr7 (137-229)||(30152748-30152840)
chr7 (133-216)||(25086942-25087025)
chr7 (137-230)||(30644175-30644268)
chr7 (113-232)||(21086108-21086227)
chr7 (113-232)||(46337839-46337959)
chr7 (113-180)||(4169132-4169199)
chr7 (137-231)||(21285349-21285444)
chr7 (113-184)||(45198070-45198141)
chr7 (134-232)||(2756424-2756522)
chr7 (137-230)||(8725133-8725226)
chr7 (113-231)||(22965930-22966048)
chr7 (137-231)||(47552218-47552312)
chr7 (137-230)||(5787467-5787560)
chr7 (137-184)||(3595339-3595386)
chr7 (136-231)||(8724385-8724480)
chr7 (113-180)||(14102517-14102584)
chr7 (113-180)||(14412534-14412601)
chr7 (137-231)||(29658268-29658363)
chr7 (135-231)||(36315966-36316064)
chr7 (140-231)||(46716338-46716429)
chr7 (137-231)||(2261480-2261574)
chr7 (113-171)||(8214175-8214233)
chr7 (113-183)||(33202526-33202596)
chr7 (137-183)||(34948159-34948205)
chr7 (137-183)||(43902532-43902578)
chr7 (137-230)||(7262994-7263087)
chr7 (115-183)||(4104535-4104603)
chr7 (108-180)||(42286380-42286452)
chr7 (113-172)||(11680719-11680778)
chr7 (113-231)||(14967605-14967724)
chr7 (113-231)||(15397081-15397200)
chr7 (140-183)||(22660794-22660837)
chr7 (113-231)||(38451867-38451986)
chr7 (113-171)||(2366422-2366480)
chr7 (137-183)||(7908762-7908808)
chr7 (149-231)||(27047723-27047805)
chr7 (137-183)||(42887207-42887253)
chr7 (113-183)||(45011630-45011700)
chr7 (113-206)||(44843722-44843814)
chr7 (124-204)||(46243323-46243405)
chr7 (155-230)||(20527443-20527519)
chr7 (158-231)||(32387140-32387215)
[»] chr5 (45 HSPs)
chr5 (113-229)||(32158386-32158502)
chr5 (137-231)||(843364-843458)
chr5 (113-223)||(2029100-2029210)
chr5 (113-231)||(18478008-18478126)
chr5 (113-231)||(29096280-29096398)
chr5 (113-231)||(30403755-30403873)
chr5 (134-231)||(42595746-42595843)
chr5 (113-231)||(6806612-6806731)
chr5 (113-231)||(29841353-29841471)
chr5 (137-230)||(42455390-42455483)
chr5 (151-231)||(18872526-18872606)
chr5 (113-232)||(13754010-13754129)
chr5 (113-227)||(6561907-6562021)
chr5 (137-231)||(19059000-19059094)
chr5 (120-231)||(3102106-3102218)
chr5 (111-183)||(8015888-8015960)
chr5 (113-225)||(14487572-14487684)
chr5 (137-231)||(2411290-2411384)
chr5 (113-223)||(15978649-15978759)
chr5 (113-231)||(20945863-20945981)
chr5 (113-183)||(29331296-29331366)
chr5 (137-231)||(33800898-33800992)
chr5 (113-232)||(34010539-34010660)
chr5 (137-183)||(38618677-38618723)
chr5 (113-183)||(3535906-3535978)
chr5 (140-232)||(20735175-20735267)
chr5 (113-226)||(29144152-29144265)
chr5 (140-231)||(1463875-1463966)
chr5 (113-165)||(9963487-9963539)
chr5 (134-226)||(33729788-33729880)
chr5 (113-164)||(5156969-5157020)
chr5 (111-230)||(6671756-6671875)
chr5 (113-183)||(18303050-18303120)
chr5 (137-183)||(1244723-1244769)
chr5 (137-183)||(10943769-10943815)
chr5 (137-183)||(20762334-20762380)
chr5 (137-231)||(27219559-27219653)
chr5 (149-183)||(28378073-28378107)
chr5 (113-231)||(29106010-29106128)
chr5 (113-183)||(43166722-43166792)
chr5 (113-183)||(30255365-30255437)
chr5 (135-171)||(4216809-4216845)
chr5 (140-231)||(4674815-4674906)
chr5 (113-232)||(9408922-9409042)
chr5 (140-180)||(21959378-21959418)
[»] scaffold0002 (1 HSPs)
scaffold0002 (113-230)||(440405-440524)
[»] scaffold0343 (1 HSPs)
scaffold0343 (134-216)||(8580-8662)
[»] scaffold0178 (1 HSPs)
scaffold0178 (137-231)||(4328-4422)
[»] scaffold0039 (1 HSPs)
scaffold0039 (113-231)||(101836-101954)
[»] scaffold1086 (1 HSPs)
scaffold1086 (113-180)||(2544-2611)
[»] scaffold2098 (1 HSPs)
scaffold2098 (113-230)||(586-703)
[»] scaffold0229 (1 HSPs)
scaffold0229 (137-183)||(22477-22522)
[»] scaffold0008 (1 HSPs)
scaffold0008 (137-231)||(43693-43786)
[»] scaffold0044 (1 HSPs)
scaffold0044 (119-183)||(49873-49937)
[»] scaffold0191 (1 HSPs)
scaffold0191 (152-231)||(16852-16930)
[»] scaffold0765 (1 HSPs)
scaffold0765 (137-171)||(809-843)
[»] scaffold0102 (1 HSPs)
scaffold0102 (113-183)||(31214-31283)
[»] scaffold1990 (1 HSPs)
scaffold1990 (119-171)||(959-1011)
[»] scaffold0334 (1 HSPs)
scaffold0334 (147-231)||(5309-5392)
[»] scaffold0092 (1 HSPs)
scaffold0092 (119-171)||(47295-47347)
[»] scaffold0011 (1 HSPs)
scaffold0011 (135-183)||(234728-234776)


Alignment Details
Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 11727435 - 11727338
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||  ||| |||||| ||||||||||  ||||||||||||||| |||||||    
T  11727435 ggttagaattcactttataaggtgaataagtggggtgtttggggttcgaactccggtccctacatataataatacattgtcctgccaactcagctatg 11727338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 7086376 - 7086258
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  ||||||||||||| ||||||||||||||| || |||||||||||||||||| |||  ||||  ||||||||||  ||||    
T  7086376 ttttttgtcaggtagtctagtggttagaattcaccttataaggtgaataattggggtgttcggggttcgaatcccggcccctgcatataataatgcattg 7086277  T
Q  213 tcctgccaactgagctatg 231  Q
     ||| ||||||||||||||    
T  7086276 ccctaccaactgagctatg 7086258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 26206298 - 26206415
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| || ||||||||||||||||||  |||||||||||||||||| |||||||| |||||||| ||| | | ||  |||||||||| |||||    
T  26206298 ttttttgtcag-tagtctaacggttagaattcaacttataaggtgaataagtggggtgttcgaggttcgaacaccatccgctgtatataataatatattg 26206396  T
Q  213 tcctgccaactgagctatg 231  Q
    || ||||||||||||||||    
T  26206397 tcttgccaactgagctatg 26206415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 8234788 - 8234882
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||| |||||||||| ||||||||| ||||||||||||||    
T  8234788 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgtattgtcctaccaactgagctatg 8234882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26206244 - 26206293
Alignment:
Q  1 ctgattatctcctctaatttgtttaatcttaattaaattcacattttgag 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26206244 ctgattatctcctctaatttgtttaatcttaattaaattcacattttgag 26206293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 9547099 - 9547218
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || |||||||||| ||||||| |||||||||| |||||||||| ||||||  |||  ||||  ||||||||||  ||||    
T  9547099 ttttttgtcaggtagtctattggctagaattcaccttataagatgaataagtggggtgttcgggattcgaaccccggcccctgcatataataatacattg 9547198  T
Q  213 tcctgccaactgagctatgt 232  Q
    ||||  ||||||||||||||    
T  9547199 tcctatcaactgagctatgt 9547218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 32891404 - 32891285
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||  ||||||| |||||||||| ||||| ||||||||||| ||||  ||||  ||||||||||  ||||    
T  32891404 ttttttgtcaggtagcctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaaaaccgacccctgcatataataatgcattg 32891305  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| |||||||||||||||    
T  32891304 tcctaccaactgagctatgt 32891285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 580779 - 580873
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||  |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  580779 tagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 580873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 2114431 - 2114525
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||||||||||| || ||||| |||||||||||  |||  ||||| ||||||||||  ||||| || ||||||||||||||    
T  2114431 tagaattcaccttataaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatataataatgcattgttctaccaactgagctatg 2114525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 20122471 - 20122565
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||| ||||||||||  |||| |||||||||||  |||  ||||| ||||||||||  |||||||| ||||||||||||||    
T  20122471 tagaattcaccttataagatgaataagtggcgtgtccggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagctatg 20122565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 17240003 - 17239906
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| ||||||| |||||||||| ||||| || ||||||||| |||  ||||  ||||||||||  ||||| || ||||||||||||||    
T  17240003 ggttagaattcaccttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatgcattgttctaccaactgagctatg 17239906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 22538662 - 22538549
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| |||||||||| ||||||  ||   ||||  ||||||||||  ||||    
T  22538662 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtgaggtgttcgggattcgaaccccaacccctgcatataataatgcattg 22538563  T
Q  213 tcctgccaactgag 226  Q
    |||| |||||||||    
T  22538562 tcctaccaactgag 22538549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 39726407 - 39726522
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || ||||||||| |||||||||| |||||||| | |||||| ||||||||   ||  ||||| ||||||||||  ||||    
T  39726407 ttttttgtcaggtagtctagtggctagaattcattttataaggtaaataagtg-gatgttcgaggttcgaacctcgacccctacatataataatgcattg 39726505  T
Q  213 tcctgccaactgagcta 229  Q
    |||| ||||||||||||    
T  39726506 tcctaccaactgagcta 39726522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 44422230 - 44422122
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  |||||||||| || |||||| ||||||||||| ||||| |||||||||||  ||| |||||  ||||||||||  ||||    
T  44422230 ttttttgtcaggtagcctagtggttagaatttaccttataaagtgaataagtggggtgtccggggttcgaactccgatccctgcatataataatgcattg 44422131  T
Q  213 tcctgccaa 221  Q
    |||| ||||    
T  44422130 tcctaccaa 44422122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 45523788 - 45523676
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| | ||  ||||||||||||| |||||||||||||| ||| |||||| ||||||||||  |||  ||||  ||||||| ||  ||||    
T  45523788 ttttttgtcaggtagtttagtggttagaattcaccttataaggtgaataggtgaggtgtttggggttcgaaccccgacccctgcatataattatacattg 45523689  T
Q  213 tcctgccaactga 225  Q
    |||| ||||||||    
T  45523688 tcctaccaactga 45523676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 10262835 - 10262744
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||||||||||||||||| |||||  ||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||| ||||    
T  10262835 aattcactttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttatg 10262744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 11133199 - 11133080
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  |||||| |||  ||||    
T  11133199 ttttttgtcaggtaacctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatgcattg 11133100  T
Q  213 t-cctgccaactgagctatg 231  Q
    | ||| ||||||||||||||    
T  11133099 tccctaccaactgagctatg 11133080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 11837088 - 11837021
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataata 204  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||  |||  ||||| ||||||||    
T  11837088 tagaattcactttataaggtgaataagtgaggtgtccggggttcgaaccccgacccctacatataata 11837021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 18386784 - 18386903
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| |||  ||| ||| |||||||||  |||||||||||||||||| ||||| ||| |||||||  ||   ||||| ||||||||||  ||||    
T  18386784 ttttttgtcaagtagcctagcggctagaattcatcttataaggtgaataagtggggtgtccggagttcgaaccccagcccctacatataataatgcattg 18386883  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| |||| ||||||||||    
T  18386884 tcctaccaattgagctatgt 18386903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 16974007 - 16973913
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||||| |||||||| ||||| |||||||||||| |    ||||  ||||||||||| |||||||| | ||||||||||||    
T  16974007 tagaattcaccttataaggtaaataagtggggtgtccggggttcgaatcctaacccctgcatataataatccattgtcctacaaactgagctatg 16973913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 30474191 - 30474285
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||   ||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  30474191 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattgtcctaccaactgagctatg 30474285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 20684086 - 20684017
Alignment:
Q  114 tttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| |||| || |||| ||| |||||||||| ||||||||||||||||||  ||||||||||||||||    
T  20684086 tttttttcagatagtctatcggctagaattcaccttataaggtgaataagtgacgtgttcggggttcgaa 20684017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 43200921 - 43200844
Alignment:
Q  155 gtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    ||||||||||| |||||||||||||||||  |||  ||||  |||||||||| |||||| || |||||||||||||||    
T  43200921 gtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatatattgttctaccaactgagctatgt 43200844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 1836687 - 1836595
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagcta 229  Q
    |||||||||| ||||| |||||||||||  ||||| |||||||||||  ||| | |||  ||||||||||  |||||||| ||||||||||||    
T  1836687 tagaattcaccttatatggtgaataagtagggtgtccggggttcgaaccccgattccttcatataataatgcattgtcctaccaactgagcta 1836595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 12206622 - 12206503
Alignment:
Q  114 tttttgtcaggtattctaacggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||||||  |||  || |||||||||| || |  |||||||||||| | |||||||||||||||||  |||  |||| ||||||||||| |||     
T  12206622 tttttgtcaggtagcctagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatg 12206523  T
Q  212 gtcctgccaactgagctatg 231  Q
     ||||||||||| |||||||    
T  12206522 ttcctgccaactaagctatg 12206503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 19905625 - 19905697
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||| ||||||||  |||| || |||||||||| |||||||||||||||||  ||||| |||||||||||    
T  19905625 tatttttggtcaggtagcctaatggctagaattcaccttataaggtgaataagtcgggtgtccggggttcgaa 19905697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 34034473 - 34034355
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaa-ttcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||||||| ||||  || ||||| |||||||| ||| ||||||||||| ||||| |||||||||||  ||| | |||  |||||||||| ||||    
T  34034473 ttttttgtcaggtagtctagtggctagaaattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggt-cctgcatataataatgtatt 34034376  T
Q  212 gt-cctgccaactgagctatg 231  Q
    || ||||||||||||||||||    
T  34034375 gtccctgccaactgagctatg 34034355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 31956990 - 31956871
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagt-gtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    ||||||||||||||  ||   ||||||||||||| |||||| |||||||||| | ||||||||| |||||||  ||   ||||| ||||||||||  |||    
T  31956990 ttttttgtcaggtagcctggtggttagaattcaccttataacgtgaataagtgggggtgttcggagttcgaaccccagcccctacatataataatgcatt 31956891  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||| ||||    
T  31956890 gtcctaccaactgagttatg 31956871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 36520793 - 36520868
Alignment:
Q  154 ggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagcta 229  Q
    |||||||||||| ||||| |||||||||||  |||  ||||| ||||||||||  |||||||| ||||||||||||    
T  36520793 ggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactgagcta 36520868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 3037618 - 3037664
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  3037618 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 3037664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 17154748 - 17154654
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||| |||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||||||| ||||| ||| ||||    
T  17154748 tagaactcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaaccgagttatg 17154654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 22297448 - 22297542
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||| || ||||||||||||||| || ||||| |||||||||||  ||   ||||  ||||||||||  |||||||| ||||||||||||||    
T  22297448 tagaattaacattataaggtgaataaatggggtgtccggggttcgaacccctgcccctgcatataataatgcattgtcctaccaactgagctatg 22297542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 26806161 - 26806215
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtg 167  Q
    |||||||||||||| | ||  ||||| ||||||||||||||||||||||||||||    
T  26806161 ttttttgtcaggtagtttagtggttataattcactttataaggtgaataagtgtg 26806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 34018063 - 34018112
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| |||||||||||||||||| ||||| || ||||||||    
T  34018063 ggttagaattcaccttataaggtgaataagtggggtgtccgaggttcgaa 34018112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 44721700 - 44721793
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| ||||||||||||||| || ||||| || ||||||||  |||  ||||  ||||||||||  ||||| || |||||||||||||    
T  44721700 tagaattcaccttataaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatgcattgttctaccaactgagctat 44721793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 33124356 - 33124407
Alignment:
Q  134 ggttagaattcac--tttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||  ||| |||||||||||| ||||||||||||||||||||    
T  33124356 ggttagaattcaccttttttaaggtgaataaatgtggtgttcggggttcgaa 33124407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 176
Target Start/End: Complemental strand, 29664726 - 29664663
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggg 176  Q
    |||||||||||||| ||||  || |||||||||| ||||||| |||||||||| ||||| ||||    
T  29664726 ttttttgtcaggtagtctagtggctagaattcaccttataagatgaataagtggggtgtccggg 29664663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 2304385 - 2304296
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagcta 229  Q
    |||||||||| ||| || |||||||| ||||| |||||||||||  |||  ||||| ||||||||||  ||||| ||||||||||||||||    
T  2304385 aattcacttt-taaagtaaataagtggggtgtccggggttcgaaccccgacccctacatataataatacattgtccctgccaactgagcta 2304296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 9520899 - 9520861
Alignment:
Q  145 actttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  9520899 actttttaaggtgaataagtggggtgttcggggttcgaa 9520861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 9796996 - 9796950
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  9796996 tagaattcaccttataagatgaataagtggggtgtccggggttcgaa 9796950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 32943462 - 32943404
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||||||||||| ||||  || || |||| ||||||||||||||||||||| |||||    
T  32943462 ttttttgtcaggtagtctagtggctaaaatttactttataaggtgaataagtggggtgt 32943404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 41195914 - 41195984
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || |||||||||| |||| |||||||||| || |||||||||| ||||||    
T  41195914 ttttttgtcaggtagcctagtggctagaattcaccttattaggtgaataaatgaggtgttcgggattcgaa 41195984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 41535312 - 41535242
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||| ||||| ||||| || || ||||||| |||||| ||||||||||| ||| | |||||||||||    
T  41535312 ttttttgttaggtagtctaatggctaaaattcaccttataaagtgaataagtggggtatccggggttcgaa 41535242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 14483630 - 14483687
Alignment:
Q  114 tttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||| |||||||| ||||  ||||||||||||| ||||||| |||||||||| |||||    
T  14483630 ttttggtcaggtagtctattggttagaattcaccttataagatgaataagtggggtgt 14483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 20533859 - 20533762
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| || |||||||||||||||||| | |||  ||||||||||   || || ||  |||||||||| | |||| || ||||||||||||||    
T  20533859 ggttagaatttaccttataaggtgaataagtgggatgtgtggggttcgaacctcgatctctgcatataataatgttttgttctaccaactgagctatg 20533762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 36665529 - 36665436
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| ||||||  |||||||||| ||||| || ||||||||  |||  ||||  ||||||||||  |||||||| | |||||||||||    
T  36665529 tagaattcaccttataaaatgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattgtcctacaaactgagctat 36665436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 29035071 - 29034980
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| |||||||| |||||||||    
T  29035071 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaagtgagctatg 29034980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 37733878 - 37733759
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  ||||||||||||| |||||||||||||||||| ||||| |||||||||||  |||| | ||  ||||||||||  ||||    
T  37733878 ttttttgtcaggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatgcattg 37733779  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| |||||||||||||||    
T  37733778 tcctaccaactgagctatgt 37733759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 19793649 - 19793531
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  ||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||  ||||  ||||||||||  ||||    
T  19793649 ttttttgtcaggtagcctagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaattccggcccctgcatataataatgcattg 19793550  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||| ||||    
T  19793549 tcctaccaactgagttatg 19793531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 15774308 - 15774402
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||| ||||||||||  |||||||| ||||||||| ||||    
T  15774308 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataataatgcattgtcctaccaactgagttatg 15774402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 35593886 - 35593815
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||||  ||| ||| |||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  35593886 ttttttgtcaggtagcctagcggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaat 35593815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 38019919 - 38020038
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt-tcggggttcgaataccgttccctaaatataataatctatt 211  Q
    ||||||||||||||  |||  || ||||||||||||||||||||||||||||| ||||| | ||| ||||||  |||  ||||  ||||||||||  |||    
T  38019919 ttttttgtcaggtagcctagtggctagaattcactttataaggtgaataagtggggtgtctggggtttcgaactccggcccctgcatataataatgcatt 38020018  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||||||||    
T  38020019 gtcctaccaactgagctatg 38020038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 4354101 - 4354195
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||||||||||||||||||| ||||| ||  |||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  4354101 tagaattcactttataaggtgaataagtggggtgtccgaagttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 4354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 49251388 - 49251485
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||| ||||    
T  49251388 ggttagaattcacattataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagttatg 49251485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 18923856 - 18923975
Alignment:
Q  112 attttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||||| || | ||| || |||||||||| |||||||||||||| ||| ||||| || ||||||||  | |  ||||  ||||||||||  |||    
T  18923856 attttttgtcagatagtttaatggctagaattcaccttataaggtgaatacgtggggtgtccgaggttcgaaccctgaaccctgcatataataatgcatt 18923955  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||||||||    
T  18923956 gtcctaccaactgagctatg 18923975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 538325 - 538419
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||| || |||||||| |||||    
T  538325 tagaattcatcttataaggtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcattgttctaccaactgaactatg 538419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 749559 - 749628
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  ||||||| |||||||||  |||||||||||||||||| |||| ||||||||||||    
T  749559 ttttttgtcaggtagcctaacggctagaattcatcttataaggtgaataagtggggtg-tcggggttcgaa 749628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 1031686 - 1031640
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  1031686 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaa 1031640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 3532970 - 3533063
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| ||||||| |||  |||  ||||| ||||||||||  |||||||| | ||||||||||||    
T  3532970 tagaattcaccttataaggtgaataagtggggtgtccggggttggaa-cccgacccctacatataataatgcattgtcctactaactgagctatg 3533063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 15368930 - 15368812
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    ||||||| ||||||||  |||  || |||||||||| ||||||  |||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||    
T  15368930 tatttttggtcaggtagcctagtggctagaattcaccttataaaatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcat 15368831  T
Q  211 tgtcctgccaactgagcta 229  Q
    |||||| ||||||||||||    
T  15368830 tgtcctaccaactgagcta 15368812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 21884698 - 21884580
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||| ||| ||||  ||||||||||||| |||||||||||||||||| |||||  ||||||||||   ||  ||||  ||||||||||  ||||    
T  21884698 tttttggtcatgtagtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattg 21884599  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  21884598 tcctaccaattgagctatg 21884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 23463958 - 23464076
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| ||||||||| | | ||| |||||||||| |||||| ||||| ||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||    
T  23463958 tttttggtcaggtatccgagcggctagaattcaccttataaagtgaacaagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattg 23464057  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||||||| |||||    
T  23464058 tcctaccaactgaactatg 23464076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 24636847 - 24636729
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||| ||||||| ||||| || ||||||| || |||| ||||||||||||| ||||| ||| |||||||  |||   |||| |||||||||| |||||    
T  24636847 ttttttatcaggtagtctaatggctagaatttaccttatcaggtgaataagtgaggtgtccggagttcgaactccggctcctacatataataatgtattg 24636748  T
Q  213 tcctgccaactgagctatg 231  Q
    || | |||||||| |||||    
T  24636747 tcataccaactgaactatg 24636729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 27745256 - 27745162
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||| |||||||||||||||||||| || ||||| |||||||||||  ||| |||||  ||||||||||  ||| |||| |||| |||||||||    
T  27745256 tagaactcactttataaggtgaataaatggggtgtccggggttcgaaccccgatccctgcatataataatgcattttcctaccaaatgagctatg 27745162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 30632353 - 30632419
Alignment:
Q  110 atattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggg 176  Q
    |||||||||| |||||| |||   ||||||||||||| ||||||| |||||||||||||||||||||    
T  30632353 atattttttgccaggtagtctggtggttagaattcaccttataagatgaataagtgtggtgttcggg 30632419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 43555846 - 43555964
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||| ||| ||||||||| |||||||| ||||| | ||||| |||  ||| |||||  ||||||||||  ||||    
T  43555846 tttttggtcaggtagtctagtggctagaatccaccttataaggtaaataagtggggtgtcctgggtttgaaccccgatccctgcatataataatgcattg 43555945  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  43555946 tcctaccaactgagctatg 43555964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 9527549 - 9527430
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || |||||||||| ||||||| |||||||||| ||||| | |||||| ||  |||  ||||  |||||| |||  ||||    
T  9527549 ttttttgtcaggtagtctagtggctagaattcaccttataagatgaataagtggggtgtccagggttcaaaccccgacccctgcatataacaatgcattg 9527450  T
Q  213 t-cctgccaactgagctatg 231  Q
    | ||||||||||||||||||    
T  9527449 tccctgccaactgagctatg 9527430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 4429454 - 4429572
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| || ||||  || |||||||||| ||||||| ||||||||||   ||||| |||||||||  ||   ||||  ||||||||||  ||||    
T  4429454 ttttttgtcagatagtctagtggctagaattcaccttataagatgaataagtggaatgttcagggttcgaaccccaacccctgcatataataatgcattg 4429553  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  4429554 tcctaccaactgagctatg 4429572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 4616996 - 4616938
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||| ||||||| ||||  || ||||||||||||||||||||||||||||| |||||    
T  4616996 ttttttatcaggtagtctagtggctagaattcactttataaggtgaataagtggggtgt 4616938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 8364404 - 8364498
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||| |||||||||||||| || ||||||||||||||  |||  || || ||||||||||  ||| |||| ||||||||| ||||    
T  8364404 tagaattcaccttaaaaggtgaataagtggggcgttcggggttcgaactccgacccatacatataataatgcattttcctaccaactgagttatg 8364498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 11405555 - 11405509
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  11405555 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 11405509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 34560310 - 34560380
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| ||||  |  |||||||||| |||||||||||||||||| ||||| || ||||||||    
T  34560310 ttttttgtcaggtagtctagtgactagaattcaccttataaggtgaataagtggggtgtccgaggttcgaa 34560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 42832046 - 42831952
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| ||||||| |||  ||   ||||  ||||||||||  | |||||| ||||||||||||||    
T  42832046 tagaattcaccttataaggtgaataagtggggtgtccggggtttgaaccccagcccctgcatataataatgcaatgtcctaccaactgagctatg 42831952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 46116146 - 46116216
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| ||||||||  |||  ||||||||||||| ||||||||||||||| || ||||| |||||||||||    
T  46116146 tttttggtcaggtagcctagtggttagaattcaccttataaggtgaataattggggtgtccggggttcgaa 46116216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 1721265 - 1721193
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcac--tttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||  ||||||| ||||||||||  ||| ||||||||||||||| ||||| |||||||||||    
T  1721265 ttttttgtcaagtagcctaacggctagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaa 1721193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 9769550 - 9769670
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    ||||||||||||||   ||  ||||||||||||| || |  |||||||||||||| ||||| |||||||||||  ||  |||||| ||||||||||  ||    
T  9769550 ttttttgtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccaatccctacatataataatgcat 9769649  T
Q  211 tgtcctgccaactgagctatg 231  Q
       ||||||||||||||||||    
T  9769650 gtccctgccaactgagctatg 9769670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 50177295 - 50177223
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataag--gtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||   ||  |||||||||||||||||||||  ||||||||||| ||||||||| |||||||    
T  50177295 ttttttgtcaggtagcttagtggttagaattcactttataaggtgtgaataagtggggtgttcggagttcgaa 50177223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 17871053 - 17871170
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || || ||||||| ||| | | |||||||||  |||||||||||||||||  |||  ||||  ||||||||||  ||||    
T  17871053 ttttttgtcaggtagtctagtggataaaattcaccttacatgatgaataagtagggtgttcggggttcgaaccccg--ccctgcatataataatgcattg 17871150  T
Q  213 tcctgccaactgagctatgt 232  Q
    ||||  ||||||||||||||    
T  17871151 tcctatcaactgagctatgt 17871170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 38021347 - 38021256
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||||| ||||||||||||||||    
T  38021347 aattcacttt-taaagtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattgtccttgccaactgagctatg 38021256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 2350375 - 2350417
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  2350375 aattcacttta-aaggtgaataagtggggtgttcggggttcgaa 2350417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 11213445 - 11213540
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||| |||||| || |||||||| ||||| |||||||||||  ||   | ||| |||||||||| ||||||  | |||||||||||||||    
T  11213445 tagaattcaccttataaagtaaataagtggggtgtccggggttcgaactccaacctctacatataataatgtattgttttaccaactgagctatgt 11213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 12073052 - 12073167
Alignment:
Q  116 tttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc 215  Q
    |||||||| || ||||  |||||||||| |||||||||||||||||| |  ||||| ||| |||||||   || ||| || ||||||||||  ||| |||    
T  12073052 tttgtcagatagtctagtggttagaatttactttataaggtgaataaattgggtgtccggagttcgaacctcgatccttagatataataatgcattatcc 12073151  T
Q  216 tgccaactgagctatg 231  Q
    | ||||||||| ||||    
T  12073152 taccaactgagttatg 12073167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 230
Target Start/End: Complemental strand, 17350156 - 17350066
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctat 230  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| |||||||||||||||||    
T  17350156 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctat 17350066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 6014490 - 6014548
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||| |||||||  ||||  |||||||||||| |||||||||||||||||| |||||    
T  6014490 ttttttatcaggtaacctaatagttagaattcaccttataaggtgaataagtggggtgt 6014548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 23930540 - 23930634
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||| ||||||||||||||| ||||| || ||||| | |||||||||  |||  ||||  ||||||||||  |||||||| |||||||| |||||    
T  23930540 tagagttcactttataaggtaaataaatggggtgtccagggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgaactatg 23930634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 24662081 - 24661987
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||| ||||||| || |||||  ||||||||||| | |  ||||  ||||||||||  |||||||| |||| |||||||||    
T  24662081 tagaattcaccttataagttgaataaatggggtgtctggggttcgaatcctgacccctgcatataataatgcattgtcctaccaattgagctatg 24661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 30649192 - 30649146
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||    
T  30649192 tagaattcacgttataaggtgaataagtggggtgtctggggttcgaa 30649146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 32711140 - 32711186
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||    
T  32711140 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaa 32711186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 37491013 - 37490895
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| ||||||| |||||||| | ||||| || |||||| |  |||  ||||  ||||||||||  ||||    
T  37491013 ttttttgtcaggtagcctagtggctagaattcaccttataagatgaataagcggggtgtccgtggttcgtaccccggcccctgcatataataatgcattg 37490914  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||| ||||    
T  37490913 tcctaccaactgagttatg 37490895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 39433457 - 39433411
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||||    
T  39433457 tagaattcaccttataaggtgaataagtggggtgtccgaggttcgaa 39433411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 47939171 - 47939241
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| ||||||||  |||  ||||||||||||| | |||||||||||||||| ||||| ||| |||||||    
T  47939171 tttttggtcaggtagcctagtggttagaattcacctaataaggtgaataagtggggtgtccggagttcgaa 47939241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 24014580 - 24014697
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||| ||||||||| ||||||| || ||||| | | |||||||  |||  ||||  ||||||||||  ||||    
T  24014580 ttttttgtcaggtagcctagtggctagaattccctttataagttgaataattggggtgtccagagttcgaactccggcccctgcatataataatgcattg 24014679  T
Q  213 tcctgccaactgagctat 230  Q
    || | |||||||||||||    
T  24014680 tcttaccaactgagctat 24014697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 29491551 - 29491474
Alignment:
Q  155 gtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  29491551 gtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgccaactgagctatg 29491474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 39434716 - 39434671
Alignment:
Q  138 agaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||| |||||||||||||||||| ||||| || ||||||||    
T  39434716 agaattcaccttataaggtgaataagtggggtgtccgaggttcgaa 39434671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 24168589 - 24168669
Alignment:
Q  151 taaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||||| |||||  ||||||||||  ||| |||||| ||||||||||  ||  |||| | ||||||||||||    
T  24168589 taaggtgaataagtggggtgtctggggttcgaaccccggtccctacatataataatgcatgttcctacaaactgagctatg 24168669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 25819280 - 25819189
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||| | |||||||||||  |||   |||| ||||||||||  ||||||| ||||||||||||||||    
T  25819280 aattcacttt-taaagtgaataagtggggtatccggggttcgaaccccggctcctacatataataatgcattgtccctgccaactgagctatg 25819189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 31965613 - 31965542
Alignment:
Q  137 tagaattcactttataa--ggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataat 206  Q
    ||||||||||||| |||  |||||||||||| ||||||||| |||||||  ||| |||||  ||||||||||    
T  31965613 tagaattcactttttaaaaggtgaataagtgaggtgttcggagttcgaaccccgatccctgcatataataat 31965542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 39238811 - 39238720
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||   ||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  39238811 aattcacttt-taaagtgaataagtggggtgtccggggttcgaacctcggcccctgcatataataatgcattgtccctgccaactgagctatg 39238720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 40678918 - 40678827
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| ||||| |||||  |||  ||||  ||||||||||  ||||||| ||||||||||||||||    
T  40678918 aattcacttt-taaagtgaataagtggggtgtccggggatcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 40678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 50755443 - 50755415
Alignment:
Q  137 tagaattcactttataaggtgaataagtg 165  Q
    |||||||||||||||||||||||||||||    
T  50755443 tagaattcactttataaggtgaataagtg 50755415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 3442966 - 3442848
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  ||||||||||||| |||||||||||||||||| |||||  ||||||||||  |||  ||| | ||||||||||  ||||    
T  3442966 ttttttgtcaggtagtctactggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccggccccgacatataataatgcattg 3442867  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  3442866 tcctaccaactgagctatg 3442848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 17859901 - 17859783
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| |||||||||||||||||  |||  |||||  |||||||||  ||||    
T  17859901 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtgaggtgttcggggttcgaactccggcccctacgtataataatgcattg 17859802  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  17859801 tcctaccaactgagctatg 17859783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 20753097 - 20753215
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||||||||| |||||||||||  |||  ||||| ||||||||||  |||     
T  20753097 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtgtggtgtccggggttcgaaccccggcccctacatataataatgcattt 20753196  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  20753197 tcctaccaactgagctatg 20753215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 3465706 - 3465588
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||| ||||| ||||  || |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||    
T  3465706 ttttttgtgaggtagtctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattg 3465607  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||| ||||    
T  3465606 tcctaccaactgagttatg 3465588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 47017942 - 47018036
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  47017942 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 47018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 43337063 - 43336991
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataat 206  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||||||  ||| |||||| ||||||||||    
T  43337063 ggttagaattcactttataagatgaataagtggggtgttcgggattcgaaccccgatccctacatataataat 43336991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 1297952 - 1297861
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagct 228  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||||| |||  ||||  |||||||||| | ||||||| |||||||||||    
T  1297952 tagaattcaccttataaggtgaataagtggagtgttcagggttcgaatcccgacccctgcatataataatgtgttgtcctaccaactgagct 1297861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 6054079 - 6053984
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||| |||||||||||||| |||||||||| || |||||||  |||  ||||  ||||||||||  |||||||| |||||||||||||||    
T  6054079 tagaattcaccttataaggtgaatacgtgtggtgtttggagttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatgt 6053984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 10098248 - 10098129
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||||||  ||||||| |||||||||| ||||| |||||||||||| |||  ||||  ||||||||||  ||||    
T  10098248 tttttggtcaggtagtctagtggctagaattcatcttataagatgaataagtggggtgtccggggttcgaatcccggcccctgcatataataatgcattg 10098149  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| ||| |||||||||||    
T  10098148 tcctaccagctgagctatgt 10098129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 36008374 - 36008279
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||  |||  ||||  |||||| |||  ||||| ||||||||||||||||||    
T  36008374 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatg 36008279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 32885787 - 32885693
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  32885787 tagaattcaccttataaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatgcattgtcctaccaactgagctatg 32885693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 12856286 - 12856189
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  |||||||| |  ||| |||| ||||||||||||||    
T  12856286 ggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccgaccccttcatataatagtgcattatcctaccaactgagctatg 12856189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 31601929 - 31601812
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| || || || || |||||||||  |||||||||||||||||| ||||| ||||||||||||  ||  ||||  ||||||||||  ||||    
T  31601929 ttttttgtcagatagtcaaatggctagaattcatcttataaggtgaataagtggggtgtccggggttcgaatctcggcccctgcatataataatacattg 31601830  T
Q  213 tcctgccaactgagctat 230  Q
    | || |||||||||||||    
T  31601829 ttctaccaactgagctat 31601812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 45350378 - 45350281
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||  |||  | ||  ||||||||||  | |||||| ||||||||||||||    
T  45350378 ggttagaattcattttataaggtgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgcactgtcctaccaactgagctatg 45350281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 45359857 - 45359760
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||||||||  |||  | ||  ||||||||||  | |||||| ||||||||||||||    
T  45359857 ggttagaattcattttataaggtgaataagtggggtgtccggggttcgaactccgacctctgcatataataatgcactgtcctaccaactgagctatg 45359760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 31480394 - 31480274
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||| | ||| ||||  ||||||||||||| || ||||||||||||||| ||||||||||||||||||  |   ||||  |||||| |||  ||||    
T  31480394 ttttttgttaagtagtctagtggttagaattcacgttttaaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatgcattg 31480295  T
Q  213 t-cctgccaactgagctatgt 232  Q
    | |||||||||||||||||||    
T  31480294 tccctgccaactgagctatgt 31480274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 37032175 - 37032254
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||| |||  ||||  ||||||||||  ||||||||    
T  37032175 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatgcattgtcct 37032254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 41944030 - 41943959
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||||  ||| ||| |||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  41944030 ttttttgtcaggtagcctagcggctagaattcaccttataaggtgaataagtagggtgtccggggttcgaat 41943959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 53697976 - 53698071
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||| ||||||||| |||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||||||  ||||||||||||||    
T  53697976 tagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaacaactgagctatgt 53698071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 23661351 - 23661449
Alignment:
Q  135 gttagaattcactttataaggt-gaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    ||||||||||||| |||||||| ||||||||| |||||||||||||||||  ||   ||||| |||||| |||  ||||||||  ||||||||||||||    
T  23661351 gttagaattcactgtataaggttgaataagtggggtgttcggggttcgaacccctacccctacatataacaatgcattgtcctagcaactgagctatgt 23661449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 36576387 - 36576317
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| |||| ||  |||||||||  |||||||||||||||||| ||||| |||||||||||    
T  36576387 ttttttgtcaggtaatctagcgactagaattcatcttataaggtgaataagtggggtgtccggggttcgaa 36576317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 49280641 - 49280759
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| |||  |||  ||||||||||||| |||||||||||||||||| ||||| | |||||| || ||||  ||||  ||||||||||  ||||    
T  49280641 ttttttgtcaagtagcctagtggttagaattcaccttataaggtgaataagtgaggtgtccagggttcaaacaccgacccctgcatataataattcattg 49280740  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||| ||||    
T  49280741 tcctaccaattgagttatg 49280759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 52560887 - 52560769
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || |||||||||| ||||||||||||||||||  ||||  | ||||||||  |||  ||||  ||||||||||  ||||    
T  52560887 ttttttgtcaggtagtctagtggctagaattcaccttataaggtgaataagtgaagtgtatgtggttcgaaccccggcccctgcatataataatgcattg 52560788  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  52560787 tcctaccaattgagctatg 52560769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 28221300 - 28221349
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  28221300 ggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 28221349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 38433412 - 38433315
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||  |||   |||| ||||||||||  ||||||||  ||||||| ||||||    
T  38433412 gttagaattcaccttataaggtgaataagtggggtgtctggggttcgaactccgactcctacatataataatgcattgtcctatcaactgaactatgt 38433315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 43115364 - 43115279
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactga 225  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||  ||  ||||  ||||||||||  |||||||| ||||||||    
T  43115364 aattcactttataaggtgaataaatggggtgtccggggttcgaatctcgacccctgcatataataatacattgtcctaccaactga 43115279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 5430360 - 5430455
Alignment:
Q  137 tagaattcactttataaggtgaataa-gtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||  ||||||||||||||| ||| ||||| |||||||||||  | | |||||  ||||||||||  |||||||| ||||||||||||||    
T  5430360 tagaattcatcttataaggtgaataaagtggggtgtccggggttcgaaccctggtccctgcatataataatacattgtcctaccaactgagctatg 5430455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 4045040 - 4045110
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| || | |||  ||||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  4045040 ttttttgtcagttagtttaattgttagaattcactttttaaagtgaataagtggggtgtttggggttcgaa 4045110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 6637718 - 6637764
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||    
T  6637718 tagaattcaccttataagatgaataagtggggtgttcggggttcgaa 6637764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 24234070 - 24234164
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||| |||||||||| ||||| |||||||| ||  |||  ||||  ||||||||||  |||| ||| ||||||||||||||    
T  24234070 tagaattcaccttataagatgaataagtggggtgtccggggttcaaaccccggcccctgcatataataatgcattgacctaccaactgagctatg 24234164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 37274703 - 37274633
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||| || ||||||| || ||||||| |||||||||| ||||| |||||||||||    
T  37274703 ttttttgtcaggtaacctaatggctagaatttaccttataagatgaataagtggggtgtccggggttcgaa 37274633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 52587335 - 52587381
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||||| |||||||||| ||||| |||||||||||    
T  52587335 tagaattcactttataagatgaataagtgaggtgtccggggttcgaa 52587381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 55656080 - 55656198
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || |||||||||  |||||||||||||||||  ||||| |||| || |||  |||  ||||  |||||||||| |||||    
T  55656080 ttttttgtcaggtaatctagtggctagaattcatcttataaggtgaataagtagggtgtccgggatttgaactccggcccctgcatataataatgtattg 55656179  T
Q  213 tcctgccaactgagctatg 231  Q
    |||  ||||||||| ||||    
T  55656180 tccaaccaactgagttatg 55656198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 56546421 - 56546539
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || ||||||||||||| ||| ||||||||||| |||||  | ||||||||  |||  ||||  ||||||||||  ||||    
T  56546421 ttttttgtcaggtagcctagtggctagaattcactttttaaagtgaataagtggggtgtctgtggttcgaaccccggcccctgcatataataatgcattg 56546520  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  56546521 tcctaccaattgagctatg 56546539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 9084860 - 9084763
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    ||||||||| || ||||||| |||||||||| ||||| || ||||||||| |||  ||||  |||||| |||  ||||||| ||||||||||||||||    
T  9084860 gttagaatttaccttataagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatgcattgtccctgccaactgagctatg 9084763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 22478734 - 22478783
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    |||||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  22478734 gttagaattcaccttataaggtgaataaatggggtgtccggggttcgaat 22478783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 23376307 - 23376199
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt-tcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||| |||  |||| || ||||||||||||| ||||||||||||||| ||||| | ||||||||||  ||| | |||| ||||||||||  |||    
T  23376307 ttttttgtcacgtagcctaatggctagaattcactttgtaaggtgaataagtggggtgtctgggggttcgaaccccgat-cctacatataataatacatt 23376209  T
Q  212 gtcctgccaa 221  Q
    ||||| ||||    
T  23376208 gtcctaccaa 23376199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 30152237 - 30152172
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggt 178  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| ||||| ||||||    
T  30152237 ttttttgtcaggtagcctattggctagaattcaccttataaggtgaataagtggggtgtccggggt 30152172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 8690309 - 8690218
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||||| ||||||||||||||||    
T  8690309 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccttgccaactgagctatg 8690218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 14149888 - 14149797
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  14149888 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 14149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 28520731 - 28520822
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  28520731 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 28520822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 40150596 - 40150477
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaa-ttcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    ||||| |||||||| ||||| || ||||| |||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||    
T  40150596 tttttggtcaggtagtctaatggatagaaattcacttt-taaagtgaataagtgaggtgtccggggttcgaaccccgacccctgtatataataatgcatt 40150498  T
Q  212 g-tcctgccaactgagctatg 231  Q
    | ||||||||||||| |||||    
T  40150497 gttcctgccaactgaactatg 40150477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 43327295 - 43327367
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||| ||||||| | ||  || || ||||||||||||||||| |||||||| ||||| |||||||||||    
T  43327295 tattttttttcaggtagtttagtggctaaaattcactttataaggtaaataagtggggtgtgcggggttcgaa 43327367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 51077955 - 51077875
Alignment:
Q  148 ttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagct 228  Q
    |||||||||||||||||| |||||||| | ||||||  |||  ||||  ||||||||||  |||||||| |||||||||||    
T  51077955 ttataaggtgaataagtggggtgttcgagattcgaactccgacccctgcatataataatgcattgtcctaccaactgagct 51077875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 10757762 - 10757817
Alignment:
Q  128 tctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| || ||||||| || |||||||||||||||||| ||||| |||||||||||    
T  10757762 tctaatggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaa 10757817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 10970933 - 10970988
Alignment:
Q  128 tctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| || ||||||| || |||||||||||||||||| ||||| |||||||||||    
T  10970933 tctaatggctagaatttaccttataaggtgaataagtggggtgtccggggttcgaa 10970988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 12820401 - 12820496
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtc-ctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| | |||||| ||  |||  ||||  |||||| |||  |||||| |||||||||||||||||    
T  12820401 tagaattcaccttataaggtgaataagtggggtgtccagggttctaaccccgacccctgcatataacaatgcattgtctctgccaactgagctatg 12820496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 15021521 - 15021478
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||| |||||||||||||||||| | |||||||||||||||    
T  15021521 aattcaccttataaggtgaataagtgggctgttcggggttcgaa 15021478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 29269314 - 29269404
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||  |||||| |||||||||| ||||| |||||||||||| ||   ||||| ||||||||||  |||||||  ||||||||||||||    
T  29269314 aattcaccatataagatgaataagtggggtgtccggggttcgaatcccagcccctacatataataatgcattgtcc-accaactgagctatg 29269404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 31578140 - 31578069
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||||  |||  || |||||||||| |||||| ||||||||||| ||||| |||| |||||||    
T  31578140 ttttttgtcaggtagcctagtggctagaattcaccttataatgtgaataagtggggtgtccgggtttcgaat 31578069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 43143816 - 43143773
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||    
T  43143816 aattcactttataaggtgaataagtggggtgtccggagttcgaa 43143773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 6082843 - 6082913
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| ||||| | ||| ||||||| ||||||| ||||||| || | |||||||| ||||||    
T  6082843 ttttttgtcaggtagtctaatgattaaaattcaccttataagatgaataaatgggatgttcgggattcgaa 6082913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 11039924 - 11039978
Alignment:
Q  129 ctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||| ||||||||||||| |||||||||||||||||| ||| | |||| ||||||    
T  11039924 ctaatggttagaattcaccttataaggtgaataagtgcggtctccgggattcgaa 11039978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 34684670 - 34684620
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||||||||    
T  34684670 ggttagaattcaccttataaggtgaataagtggggtgtctgaggttcgaat 34684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 34773679 - 34773725
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||| ||||||||||| ||||| |||||||||||    
T  34773679 tagaattcaccttataaagtgaataagtggggtgtccggggttcgaa 34773725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 36257793 - 36257747
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| ||| ||||||||||| ||||| |||||||||||    
T  36257793 tagaattcactttttaaagtgaataagtggggtgtccggggttcgaa 36257747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 54304901 - 54304971
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || |||||||||| ||||||| |||||||||| | |||||||| ||||||    
T  54304901 ttttttgtcaggtagcctagtggctagaattcaccttataagctgaataagtgggatgttcgggattcgaa 54304971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 42395683 - 42395634
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataa 162  Q
    |||||||||||||| |||   || ||||||||||||||||||||||||||    
T  42395683 ttttttgtcaggtagtctggtggctagaattcactttataaggtgaataa 42395634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 54854149 - 54854221
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| ||| ||||  || ||||||||||||| |  |||||||||||||||| ||| |||||||||||    
T  54854149 ttttttgtcaagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaa 54854221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 534752 - 534788
Alignment:
Q  129 ctaacggttagaattcactttataaggtgaataagtg 165  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  534752 ctaatggttagaattcaccttataaggtgaataagtg 534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 9693057 - 9692966
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||| | ||||||||||||||||||    
T  9693057 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattatccctgccaactgagctatg 9692966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 42411453 - 42411545
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| || |||||||| ||||| |||||||||||  |||  ||||  ||||||| ||  ||||| ||||||||||||||||||    
T  42411453 aattcactttttaaagtaaataagtggggtgtccggggttcgaaccccgacccctgcatataattatgcattgtccctgccaactgagctatg 42411545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 48968210 - 48968301
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| |||||||||||| |||||    
T  48968210 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgaactatg 48968301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 52608578 - 52608657
Alignment:
Q  151 taaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||| |||||||||| ||||| |||||||||||  ||| ||| |  ||||||||||  |||||||| ||||||||||||||    
T  52608578 taagatgaataagtg-ggtgtccggggttcgaactccgatccatgcatataataatgcattgtcctaccaactgagctatg 52608657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 42688158 - 42688061
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||| |||  ||||| ||||||||||  |||||||| |||||||| |||||    
T  42688158 ggttagaattcaccttataaggtaaataagtggggtgttcggggttcgaatcccgacccctacatataataatgcattgtcctaccaactgaactatg 42688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 15042358 - 15042455
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  15042358 ggttagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 15042455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 9525080 - 9524962
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| ||||||||  ||||||| |||||||||| |||||||||||||||||  |||||  ||||||||||  |||  ||||  ||||||||||  ||||    
T  9525080 tttttggtcaggtagcctaacggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattg 9524981  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  9524980 tcctaccaactgagctatg 9524962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 24608455 - 24608573
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| ||||||||  ||||||| |||||||||| |||||||||||||||||  |||||  ||||||||||  |||  ||||  ||||||||||  ||||    
T  24608455 tttttggtcaggtagcctaacggctagaattcaccttataaggtgaataagtagggtgtctggggttcgaaccccggcccctgcatataataatgcattg 24608554  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  24608555 tcctaccaactgagctatg 24608573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 5184880 - 5184977
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| |||||||||||||||||| ||||| | |||||||||  ||   ||||  ||||||||||| |||||||| ||||||||||||||    
T  5184880 ggttagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccagcccctgcatataataatccattgtcctaccaactgagctatg 5184977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 25689358 - 25689478
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    ||||||| ||||||||  |||  ||||||||||||||||||||||||| |||||  ||||| |||||||||||   ||  ||||| ||||||||||  |     
T  25689358 tatttttggtcaggtagcctagtggttagaattcactttataaggtgattaagtagggtgtccggggttcgaacctcggcccctacatataataatgcag 25689457  T
Q  211 tgtcctgccaactgagctatg 231  Q
    |||||| ||||||||||||||    
T  25689458 tgtcctaccaactgagctatg 25689478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 17987421 - 17987540
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||| |||  || || ||||||| ||||||||||||||| || ||||| |||||||||||  |||  ||||  ||||||||||  |||     
T  17987421 ttttttgtcaggtatcctagtggctataattcaccttataaggtgaataattggggtgtccggggttcgaactccggcccctgcatataataatgcatta 17987520  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| |||||||||||||||    
T  17987521 tcctaccaactgagctatgt 17987540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 23239246 - 23239180
Alignment:
Q  114 tttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||||||||| ||||  ||||| |||||||||||||||||||||||||| ||||| ||||||||    
T  23239246 tttttgtcaggtagtctagtggttaaaattcactttataaggtgaataagtggggtgtccggggttc 23239180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 43468677 - 43468795
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| ||  |||  || |||||||||| |||||||||||||||||| ||||| ||| |||||||  |||  ||||| |||||| |||  ||||    
T  43468677 ttttttgtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatgcattg 43468776  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  43468777 tcctaccaactgagctatg 43468795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 4798513 - 4798630
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||||||| ||| |||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||     
T  4798513 tttttggtcaggtagtctagtggctagaattcaccttacaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcatta 4798612  T
Q  213 tcctgccaactgagctat 230  Q
    |||| |||||||||||||    
T  4798613 tcctaccaactgagctat 4798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 36359688 - 36359760
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||| ||||  || |||||||||| |||||||||||||||||| ||||| |||| ||||||    
T  36359688 tattttttgtcaggtagtctagtggctagaattcaccttataaggtgaataagtggggtgtccgggattcgaa 36359760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 27822193 - 27822074
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||| || || ||||| | |||||||||||||||||| |||||| ||||||| ||| | |  ||||  ||||||||||  |||     
T  27822193 ttttttgtcaggtagtctaatggctaaaattctccttataaggtgaataagtggggtgtttggggttcaaatccggacccctgcatataataatgcatta 27822094  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| ||||||||| |||||    
T  27822093 tcctaccaactgagttatgt 27822074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 7649651 - 7649534
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| || ||||||||||||||| |||||||| ||||||||  ||   ||||| ||||||||||  ||||    
T  7649651 ttttttgtcaggtagcctagtggctagaattcaccttgtaaggtgaataagtggggtgttcgaggttcgaa-ccccagccctacatataataatgcattg 7649553  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  7649552 tcctaccaagtgagctatg 7649534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 10970389 - 10970271
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||  |||||||||||||||||| ||||||||||||| |||  ||   ||||  ||||||||||  |||     
T  10970389 ttttttgtcaggtaacctagtggctagaattcatcttataaggtgaataagtggggtgttcggggtttgaaccccagcccctgcatataataatgcatta 10970290  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  10970289 tcctaccaactgagctatg 10970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 13762484 - 13762602
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| || ||||| | |||||||| || || ||||||||||||||| ||||| || |||||||| || |  ||||  ||||||||||  ||||    
T  13762484 ttttttgtcagatagtctaatgattagaatttaccttgtaaggtgaataagtggggtgtccgtggttcgaacactgacccctgcatataataatgcattg 13762583  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||||||| |||||    
T  13762584 tcctaccaactgaactatg 13762602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 26703886 - 26703980
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||||  |||  || |  ||||||||||  |||||||| ||||||||| ||||    
T  26703886 tagaattcaccttataaggtgaataagtgaggtgttcgggattcgaaccccgacccttgcatataataatgcattgtcctaccaactgagttatg 26703980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 30542887 - 30542817
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||| ||||||||||||  ||||||||||||| ||||||||||||||| ||   |||||||||||||||    
T  30542887 ttttttatcaggtattctagtggttagaattcaccttataaggtgaataaatggaatgttcggggttcgaa 30542817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 10199738 - 10199827
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgag 226  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||  |||  ||||  ||||||||||  |||||||| | |||||||    
T  10199738 tagaattcaccttataaggtgaataagtggggtgtttggggttcgaaccccggcccctgcatataataatgcattgtcctactaactgag 10199827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 39484363 - 39484460
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||  ||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  39484363 ggttagaattcaccttataagatgaataagtggggtgtccggcattcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 39484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 44070364 - 44070456
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagcta 229  Q
    |||||||||| |||||||||||||||||  ||||| || ||||||||   ||  ||||| |||||||||| ||||||||| | ||||||||||    
T  44070364 tagaattcaccttataaggtgaataagtagggtgtccgaggttcgaaccgcggcccctacatataataatgtattgtcctactaactgagcta 44070456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 1032954 - 1033048
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagcta 229  Q
    ||||||||||||  |||||||||||||||||| ||||||| |||||||||  |||  ||||  ||||||||||  |||||||  ||||||||||||    
T  1032954 ggttagaattcatcttataaggtgaataagtggggtgttc-gggttcgaactccgacccctgcatataataatgcattgtcccaccaactgagcta 1033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 9737359 - 9737450
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||| |||||| || |||||||| ||||| ||| |||||||   ||  ||||| |||||||||| ||||||||| ||||||||||||||    
T  9737359 aattcaccttataaagtaaataagtggggtgtccggagttcgaacctcggcccctatatataataatgtattgtcctaccaactgagctatg 9737450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 24074605 - 24074514
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagct 228  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||||   |   ||||| ||||||||||  |||||||| |||||||||||    
T  24074605 tagaattcaccttataaggtgaataagtgaggtgtccgaggttcgaacttcaacccctacatataataatgcattgtcctaccaactgagct 24074514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 6978943 - 6978873
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||| ||||| || ||||| || |||||||||||||||||||||||||| ||  ||||||| ||||||||    
T  6978943 tttttggtcagatagtctaatggctagaattcactttataaggtgaataaatggagtgttcgtggttcgaa 6978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 10309632 - 10309698
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggtt 179  Q
    ||||||||||||||   |||||| |||||||||| |||||  ||||||||||| |||||||||||||    
T  10309632 ttttttgtcaggtagcttaacggctagaattcaccttatagagtgaataagtggggtgttcggggtt 10309698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 14683999 - 14683929
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| ||||  |  |||||||||| |||||||||||||||||| | ||| |||||||||||    
T  14683999 ttttttgtcaggtagtctagtgactagaattcaccttataaggtgaataagtgggatgtccggggttcgaa 14683929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 23964777 - 23964715
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcgg 175  Q
    ||||||||||| || |||||||| |||||||||| |||||| | ||||||||| |||||||||    
T  23964777 ttttttgtcagatagtctaacggctagaattcaccttataaagagaataagtgaggtgttcgg 23964715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 25139859 - 25139929
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| | |   ||||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  25139859 ttttttgtcaggtagtttggtggttagaattcacattataagatgaataagtgggatgttcggggttcgaa 25139929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 34073235 - 34073281
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  34073235 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 34073281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 2800114 - 2800023
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  2800114 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 2800023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 27558843 - 27558958
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| | |||||||||||||||| |||| || |||||||||| |||  ||||  ||||||||||  |||     
T  27558843 ttttttgtcaggtagactagtggctagaattcacctaataaggtgaataagtggggtg-tctgggttcgaatcccgacccctgcatataataatgcatta 27558941  T
Q  213 tcctgccaactgagcta 229  Q
    |||| |||| |||||||    
T  27558942 tcctaccaaatgagcta 27558958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 28378936 - 28378816
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagt-gtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    ||||| |||||||| | ||  ||||||||||||| ||||||||||||||||| | ||||| |||||||||||   |   ||||  |||||||||| | ||    
T  28378936 tttttggtcaggtagtttagtggttagaattcaccttataaggtgaataagtgggggtgtccggggttcgaacctcagcccctgcatataataatatctt 28378837  T
Q  212 gtcctgccaactgagctatgt 232  Q
    ||||| |||| ||||||||||    
T  28378836 gtcctaccaattgagctatgt 28378816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 30942598 - 30942674
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||||||    
T  30942598 aattcaccttataaggtaaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcct 30942674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 43847779 - 43847707
Alignment:
Q  159 ataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||| |||||||||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  43847779 ataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 43847707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 3379623 - 3379689
Alignment:
Q  116 tttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||   ||| || |||||||||| |||||||||||||||||| |||| ||||||||||||    
T  3379623 tttgtcaggtagcttaatggctagaattcaccttataaggtgaataagtggggtg-tcggggttcgaa 3379689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 183
Target Start/End: Complemental strand, 8034618 - 8034583
Alignment:
Q  148 ttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||||| |||||||||||||||||    
T  8034618 ttataaggtgaataagtggggtgttcggggttcgaa 8034583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 10184773 - 10184876
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||| || |||||||||| ||||||||||||||| ||  |||| ||| |||||||   |  |||||| ||||||||||  ||||    
T  10184773 tttttagtcaggtagtctaatggctagaattcaccttataaggtgaataaatggagtgtccggagttcgaacctcagtccctacatataataatgcattg 10184872  T
Q  213 tcct 216  Q
    ||||    
T  10184873 tcct 10184876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 11823069 - 11823018
Alignment:
Q  129 ctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||| |||||||||  |||||||||||||||||| ||||| ||||||||    
T  11823069 ctaacggctagaattcatcttataaggtgaataagtggggtgtccggggttc 11823018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 18030758 - 18030707
Alignment:
Q  134 ggttagaattcac-tttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  18030758 ggttagaattcacatttttaaggtgaataagtagggtgttcggggttcgaat 18030707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 27868826 - 27868711
Alignment:
Q  116 tttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc 215  Q
    ||||||||||| | ||| || |||||||||| |||||||| |||||| || | |||||| | |||||| |||   ||||  |||||||||| |||| | |    
T  27868826 tttgtcaggtagtataatggctagaattcaccttataaggagaataaatgggatgttcgagattcgaacaccaacccctgcatataataatgtattattc 27868727  T
Q  216 tgccaactgagctatg 231  Q
    | ||||||||||||||    
T  27868726 taccaactgagctatg 27868711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 184
Target Start/End: Complemental strand, 37154637 - 37154566
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    |||||||||||||| ||||  |  |||||||||| ||||||||||||||| || ||||| | ||||||||||    
T  37154637 ttttttgtcaggtagtctagtgcctagaattcaccttataaggtgaataaatggggtgtccagggttcgaat 37154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 14010768 - 14010814
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||| || |||||||||||||||||| ||||| |||||||||||    
T  14010768 tagaatttaccttataaggtgaataagtggggtgtccggggttcgaa 14010814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 33570425 - 33570471
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| || ||||||||    
T  33570425 tagaattcaccttataaggtgaataagtggggtgtccgaggttcgaa 33570471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 33982313 - 33982243
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| || ||||  || |||||||||| |||||| ||||||||||| |||||  ||||||||||    
T  33982313 ttttttgtcagatagtctattggctagaattcaccttataaagtgaataagtgcggtgtctggggttcgaa 33982243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 40249853 - 40249970
Alignment:
Q  116 tttgtcaggtattctaacggttagaattcactttataaggtgaataagt--gtggtgttcggggttcgaataccgttccctaaatataataatctattgt 213  Q
    |||||||||||  |||  ||||||||||||  |||||||||||||||||  | ||||| ||| |||||||  ||| || ||  ||||||||||  |||||    
T  40249853 tttgtcaggtagcctagtggttagaattcatcttataaggtgaataagtgggaggtgtccggagttcgaactccgatcactgcatataataatgcattgt 40249952  T
Q  214 cctgccaactgagctatg 231  Q
    ||| ||||||||| ||||    
T  40249953 cctaccaactgagttatg 40249970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 2696628 - 2696537
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||| ||||    
T  2696628 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagttatg 2696537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 43874971 - 43875007
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||||||||| |||||||||||||||||| |||||    
T  43874971 gttagaattcaccttataaggtgaataagtggggtgt 43875007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 12089220 - 12089102
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| ||||||||| |||  || |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||    
T  12089220 tttttggtcaggtatcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatataataatgcattg 12089121  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  12089120 tcctaccaactgagctatg 12089102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 12127881 - 12127999
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||||||| ||||||||||||||||||  |||| |||||||||||| |||  ||||  ||||||||||  ||||    
T  12127881 tttttagtcaggtagtctagtggctagaattcaccttataaggtgaataagtggcgtgtccggggttcgaattccgacccctgcatataataatgcattg 12127980  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  12127981 tcctaccaactgagctatg 12127999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 22389722 - 22389840
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| |||| ||| |||||||||| |||||||||||||||||| ||||| |||| ||||||  | |  ||||  ||||||||||  ||||    
T  22389722 ttttttgtcaggtagtctagcggctagaattcaccttataaggtgaataagtggggtgtccgggattcgaaccctgacccctgcatataataatgcattg 22389821  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  22389822 tcctaccaactgagctatg 22389840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 9491707 - 9491825
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| ||  |||  ||||||||||||  |||||||||||||||||| ||||| |||||||||||  |||  ||||| ||||||||||  ||||    
T  9491707 ttttttgtcagttagcctagtggttagaattcatcttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataataatgcattg 9491806  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||| ||||    
T  9491807 tcctaccaactgagttatg 9491825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 15126365 - 15126248
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| ||||| || | ||| ||||||||||||| ||||||||||||||| || ||||| ||| |||||||  || | ||||| |||||||||| |||||    
T  15126365 tttttagtcagatagtttaatggttagaattcaccttataaggtgaataaatggggtgtccggagttcgaa-cccctcccctacatataataatgtattg 15126267  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  15126266 tcctaccaactgagctatg 15126248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 20716364 - 20716482
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| || ||||| ||||||||||||  ||||||| |||||||||| ||| |  || |||||||| |||  ||||| ||||||||||  ||||    
T  20716364 ttttttgtcagatagtctaatggttagaattcatcttataagatgaataagtggggtatctggagttcgaatcccgacccctacatataataatgcattg 20716463  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  20716464 tcctaccaactgagctatg 20716482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 35190862 - 35190768
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||| || ||||||||||||||    
T  35190862 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaactccgacccctgcatataataatgcattgttctaccaactgagctatg 35190768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 10377096 - 10377213
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || |||||||||  |||||| ||||||||||| |||||||||||||||||  |||  | ||  ||||||||||  ||||    
T  10377096 ttttttgtcaggtagtctagtggctagaattcatcttataacgtgaataagtggggtgttcggggttcgaaccccggcctctgcatataataatgcattg 10377195  T
Q  213 tcctgccaactgagctat 230  Q
    |||| |||||||||||||    
T  10377196 tcctaccaactgagctat 10377213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 22501142 - 22501023
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaatacc-gttccctaaatataataatctatt 211  Q
    |||||||||||||| ||||  || |||||||||| ||| |||||||||||||| |||||||  ||||||||| || |  ||||  ||||||||||  |||    
T  22501142 ttttttgtcaggtagtctagtggctagaattcaccttacaaggtgaataagtggggtgttcttggttcgaatcccggacccctgcatataataatgcatt 22501043  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||||||||    
T  22501042 gtcctaccaactgagctatg 22501023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 8233209 - 8233091
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||  ||||  || |||||||||| |||||||||||||||||  ||||||||| |||||||  | |  | ||  |||||||||| |||||    
T  8233209 ttttttgtcaggtggtctattggctagaattcacattataaggtgaataagtaaggtgttcggagttcgaaccctgacctctgtatataataatgtattg 8233110  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  8233109 tcctaccaactgagctatg 8233091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 18631571 - 18631477
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||| ||||||||||| ||| || ||||||||||| |||  ||||  |||||| ||| ||||||||| ||||||||||||||    
T  18631571 tagaattcaccttataaagtgaataagtggggtatttggggttcgaatcccgacccctgcatataacaatgtattgtcctaccaactgagctatg 18631477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 12101985 - 12101898
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactg 224  Q
    |||||||||| |||||||||||||||||  ||||| |||||||||||  |||  ||||  |||||||||| ||||||||| |||||||    
T  12101985 tagaattcaccttataaggtgaataagtagggtgtccggggttcgaacgccggcccctgcatataataatgtattgtcctaccaactg 12101898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 22850934 - 22850816
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| ||||||||| || |||||||||  |||||||||| |||| || |||||||||| ||||||  ||   ||||  |||||||||| ||||     
T  22850934 ttttttgtcaagtattctaatggctagaattcatcttataaggtgtataaatggggtgttcgggcttcgaaccccaacccctgcatataataatgtattt 22850835  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| | ||||||||||||    
T  22850834 tcctactaactgagctatg 22850816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 9438425 - 9438312
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| |||  |||  ||||||||||||| ||||||||||||| |||| ||||| |||||||||||  ||   ||||  ||||||||||  ||||    
T  9438425 ttttttgtcaagtagcctagtggttagaattcaccttataaggtgaatgagtggggtgtccggggttcgaaccccaacccctgcatataataatgcattg 9438326  T
Q  213 tcctgccaactgag 226  Q
    |||| |||||||||    
T  9438325 tcctaccaactgag 9438312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 221
Target Start/End: Original strand, 753284 - 753392
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||   | |||||||||  |||||||| ||||||||| ||||| | |||||||||  |||  ||||| |||||||||| |||||    
T  753284 ttttttgtcaggtagtctagtagctagaattcatcttataaggggaataagtggggtgtccagggttcgaaccccgacccctacatataataatgtattg 753383  T
Q  213 tcctgccaa 221  Q
    |||| ||||    
T  753384 tcctaccaa 753392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 6025357 - 6025476
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    |||||||| |||||||   |||||| |||||||||| ||||||| |||||||||| | ||| |||||||||||| |||  ||||  ||||||||||  ||    
T  6025357 tattttttatcaggtagcttaacggctagaattcaccttataagatgaataagtg-gatgtccggggttcgaatcccgacccctgcatataataatgcat 6025455  T
Q  211 tgtcctgccaactgagctatg 231  Q
    | |||| ||||||||| ||||    
T  6025456 tatcctaccaactgagttatg 6025476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 19165473 - 19165358
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| |||| ||||||||||||  ||   | ||  ||||||||||  ||||    
T  19165473 ttttttgtcaggtagactagtggctagaattcaccttataaggtgaataagtggggtg-tcggggttcgaaccccaacctctgcatataataatgcattg 19165375  T
Q  213 tcctgccaactgagcta 229  Q
    |||| ||||||||||||    
T  19165374 tcctaccaactgagcta 19165358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 3591301 - 3591372
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||||  ||| ||  |||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  3591301 ttttttgtcaggtaacctagcgactagaattcaccttataaggtgaataagtagggtgtccggggttcgaat 3591372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 6270605 - 6270684
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    |||||||||| ||||||||||||||| || ||||||| |||||||||  |||  ||||  |||||||||| |||||||||    
T  6270605 tagaattcaccttataaggtgaataattggggtgttcagggttcgaaccccggcccctgcatataataatatattgtcct 6270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 30566181 - 30566114
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    |||||||||||||| ||||  || | |||||||| |||||||||||||||||| ||||| ||||||||    
T  30566181 ttttttgtcaggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtccggggttc 30566114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 7720475 - 7720545
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||| |||||||  ||| ||| |||||| ||| |||||||||||||||||| ||||| |||||||||||    
T  7720475 ttttttatcaggtagcctagcggctagaatccaccttataaggtgaataagtggggtgtccggggttcgaa 7720545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 9424566 - 9424497
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| || |||| ||  |||||||||| |||||||||||||||||| |||| ||||||||||||    
T  9424566 ttttttgtcagatagtctagcgactagaattcaccttataaggtgaataagtgaggtg-tcggggttcgaa 9424497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 12311397 - 12311491
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctat 230  Q
    |||||||||| || ||||||||||||||| | |||| ||| ||||||| |||    ||| |||||||||| |||||| |||||||||||||||||    
T  12311397 tagaattcacattttaaggtgaataagtgagatgtttgggattcgaatcccgacaactacatataataatgtattgtccctgccaactgagctat 12311491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 22983682 - 22983600
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||||||    
T  22983682 ggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtcct 22983600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 23804726 - 23804808
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||||||    
T  23804726 ggttagaattcaccttataagatgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatacattgtcct 23804808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 25020524 - 25020570
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  25020524 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 25020570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 34365834 - 34365740
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||||||||| ||||||||||  ||||||| ||||||||  |||  ||||  | ||||||||  |||||||| |||||||| |||||    
T  34365834 tagaattcactttataagatgaataagtggagtgttcgaggttcgaaccccggcccctgcacataataatgcattgtcctaccaactgaactatg 34365740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 34396206 - 34396088
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  ||||||||||||| ||||||||||||||| |  ||||| ||| |||||||  |||  ||||  ||||||||||  ||||    
T  34396206 tttttggtcaggtagtctattggttagaattcaccttataaggtgaataaatagggtgtccggagttcgaactccggcccctgcatataataatgcattg 34396107  T
Q  213 tcctgccaactgagctatg 231  Q
    || | |||||||| |||||    
T  34396106 tcgtaccaactgaactatg 34396088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 226
Target Start/End: Original strand, 18904679 - 18904768
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgag 226  Q
    |||||||||| |||||||||||||||||| ||||| | | |||||||  |||  || || ||||||||||  |||||||| |||||||||    
T  18904679 tagaattcaccttataaggtgaataagtggggtgtccagagttcgaaccccggcccatacatataataatgcattgtcctaccaactgag 18904768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 20568262 - 20568299
Alignment:
Q  146 ctttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||||||| |||||||||||||||||    
T  20568262 ctttataaggtgaataagtggggtgttcggggttcgaa 20568299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 29284213 - 29284122
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg-tcctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  ||| |||||| ||||||||||  |||| |||| ||||||||| ||||    
T  29284213 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccgatccctacatataataatacattgttcctaccaactgagttatg 29284122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 2970312 - 2970209
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  | || || |||||||||  |||||||||||||||||| ||||| ||||||| |||   ||  ||||| |||||||||| ||||     
T  2970312 ttttttgtcaggtagccaaatggctagaattcatcttataaggtgaataagtggggtgtccggggtttgaacctcggcccctacatataataatgtattc 2970213  T
Q  213 tcct 216  Q
    ||||    
T  2970212 tcct 2970209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 3448451 - 3448405
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  3448451 tagaattcaccttataagatgaataagtggggtgtccggggttcgaa 3448405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 5288341 - 5288435
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||||||||||||||| || ||||| ||| ||||| |  |||  ||||  ||||||||||  |||||||| ||||||||| ||||    
T  5288341 tagaattcaccttataaggtgaataattgaggtgtccggagttcggaccccgacccctgcatataataatgcattgtcctaccaactgagttatg 5288435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Original strand, 6530176 - 6530234
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||||||| ||| ||||  || |||||||||| |||||||||||||||||| |||||    
T  6530176 ttttttgtcaagtagtctagtggctagaattcaccttataaggtgaataagtggggtgt 6530234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 16251519 - 16251565
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| ||| |||||||    
T  16251519 tagaattcaccttataaggtgaataagtggggtgtccggagttcgaa 16251565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 6144045 - 6143969
Alignment:
Q  155 gtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    ||||||||||| ||||| |||||||||||  |||  ||||| ||||||||||  ||||| ||||||||||||||||||    
T  6144045 gtgaataagtggggtgtccggggttcgaa-cccgacccctacatataataatgcattgtccctgccaactgagctatg 6143969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 17347379 - 17347319
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcac--tttataaggtgaataagtgtggtgt 171  Q
    |||||||||||||| ||||| |||||||||| ||  ||| ||||||||||||||| |||||    
T  17347379 ttttttgtcaggtagtctaatggttagaatttaccttttttaaggtgaataagtggggtgt 17347319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 5678193 - 5678241
Alignment:
Q  117 ttgtcaggtattctaacggttagaattcactttataaggtgaataagtg 165  Q
    |||||||||| ||||  || |||||||||| ||||||||||||||||||    
T  5678193 ttgtcaggtagtctagtggatagaattcaccttataaggtgaataagtg 5678241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 14981702 - 14981793
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| | |||||||||  |||  ||||  ||||||||||  ||||||| ||||||||||||||||    
T  14981702 aattcacttt-taaagtgaataagtggggtgtccagggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 14981793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 49639127 - 49639033
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||  |||  ||||| ||||||||||  |||||||| ||||||||||||||    
T  49639127 tagaattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataataatgcattgtcctaccaactgagctatg 49639033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 13539942 - 13540053
Alignment:
Q  119 gtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgc 218  Q
    |||||||| ||||| || |||||||||| ||||||||| |||||||| ||||| |||||||||||  ||   ||||| ||||||||||  |||||||| |    
T  13539942 gtcaggtagtctaatggctagaattcaccttataaggtaaataagtggggtgtccggggttcgaaccccaacccctacatataataatgcattgtcctac 13540041  T
Q  219 caactgagctat 230  Q
    ||||||||||||    
T  13540042 caactgagctat 13540053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 20244257 - 20244140
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||  ||||| ||||||||||||| |||||||||||||| |||  || | |||||||||||  |||  ||||  ||||||||||  ||||    
T  20244257 ttttttgtcaggtggtctaatggttagaattcaccttataaggtgaatacgtgaagtatccggggttcgaaccccggcccctgcatataataatgcattg 20244158  T
Q  213 tcctgccaactgagctat 230  Q
    |||| |||||||||||||    
T  20244157 tcctaccaactgagctat 20244140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 36331698 - 36331817
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  || ||||||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||    
T  36331698 ttttttgtcaggtagtctagtggctagaattcactttttaaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattg 36331797  T
Q  213 t-cctgccaactgagctatg 231  Q
    | |||||||| |||||||||    
T  36331798 tccctgccaattgagctatg 36331817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 335026 - 335120
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| | |||||||||  ||| ||| || ||||||||||  |||||||| |||||| |||||||    
T  335026 tagaattcaccttataaggtgaataagtggggtgtccagggttcgaactccggtccttacatataataatgcattgtcctaccaactaagctatg 335120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 33206856 - 33206762
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  ||   ||||  ||||||||||  |||||||| ||||||||||||||    
T  33206856 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatataataatgcattgtcctaccaactgagctatg 33206762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 45713603 - 45713493
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||   |||||||||||| |||||||||||||||||| ||||| ||| |||||||  |||  ||||| ||||||||||  ||||    
T  45713603 ttttttgtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtccggagttcgaactccggcccctacatataataatgcattg 45713504  T
Q  213 tcctgccaact 223  Q
    |||| ||||||    
T  45713503 tcctaccaact 45713493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 18201449 - 18201520
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    ||||||||||||||  ||| ||| |||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  18201449 ttttttgtcaggtaacctagcggctagaattcaccttataaggtgaataagtagggtgtccggggttcgaat 18201520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 43566792 - 43566887
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||| |||||||||||||||||| |||||  | ||||||||  |||  ||||  ||||||||||  |||||||| |||||||||||||||    
T  43566792 tagaattcaccttataaggtgaataagtggggtgtctgaggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagctatgt 43566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 47191472 - 47191377
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||  ||   ||||  ||||||||||  ||||| ||||||||||||||||||    
T  47191472 tagaattcatcttataaggtgaataagtggggtgttcggggttcgaactccagcccctgcatataataatgcattgtccctgccaactgagctatg 47191377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 14417967 - 14417873
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  ||   ||||  ||||||||||  |||||||| |||| |||||||||    
T  14417967 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccagcccctgcatataataatgcattgtcctaccaattgagctatg 14417873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 24537934 - 24537880
Alignment:
Q  129 ctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||| |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  24537934 ctaacggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 24537880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 32508790 - 32508836
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  32508790 tagaattcaccttataaggtgaataagtggggtgttcggggttcgaa 32508836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 35483392 - 35483274
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||| ||||| ||||  || ||||||| || |||||||||||||||||| ||||| |||| ||||||  |||  ||||  ||||||||||  ||||    
T  35483392 ttttttgttaggtagtctagtggctagaatttaccttataaggtgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatgcattg 35483293  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| | ||||||||||||    
T  35483292 tcctactaactgagctatg 35483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 43774308 - 43774190
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| |||||  ||||||||||  |||  ||||  |||||| |||  ||||    
T  43774308 ttttttgtcaggtaacctagtggctagaattcaccttataaggtgaataagtggggtgtctggggttcgaaccccgacccctgcatataacaatgcattg 43774209  T
Q  213 t-cctgccaactgagctat 230  Q
    | |||||||||||||||||    
T  43774208 tccctgccaactgagctat 43774190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 48173385 - 48173291
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  ||   || || ||||||||||  |||||| | ||||||||||||||    
T  48173385 tagaattcaccttataaggtgaataagtgaggtgtccggggttcgaactccaacccatacatataataatgcattgtcttaccaactgagctatg 48173291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 49146183 - 49146094
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgag 226  Q
    |||||||||| |||||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  |||||||| |||||||||    
T  49146183 tagaattcaccttataaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgag 49146094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 10959228 - 10959137
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||| ||||||||||  ||||| ||||||||||||||||||    
T  10959228 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctatatataataatgcattgtccctgccaactgagctatg 10959137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Complemental strand, 2732763 - 2732716
Alignment:
Q  136 ttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  2732763 ttagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 2732716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 16277946 - 16278041
Alignment:
Q  136 ttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||  |||||||||||||||||| | ||| ||| |||||||| |||  ||||  ||||||||||  || ||||| ||||||||||||||    
T  16277946 ttagaattcatcttataaggtgaataagtgggatgtccggagttcgaatcccgacccctgcatataataatgcatggtcctaccaactgagctatg 16278041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 17439932 - 17440055
Alignment:
Q  108 caatattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatc 207  Q
    |||| ||||| ||||||||  |||  ||||| ||||||| |||||||||||||||||| ||| | || ||||| || ||||  ||||  ||||||||||     
T  17439932 caatttttttggtcaggtagcctagtggttaaaattcaccttataaggtgaataagtggggtatccgaggttcaaacaccggcccctgcatataataatg 17440031  T
Q  208 tattgtcctgccaactgagctatg 231  Q
     |||||||| ||||| ||||||||    
T  17440032 cattgtcctaccaaccgagctatg 17440055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 50144578 - 50144661
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaa 196  Q
    ||||||||||| || ||||  || |||||||||| ||||||||||||||||||  |||| |||||||||||  ||| |||||||    
T  50144578 ttttttgtcagatagtctagtgggtagaattcaccttataaggtgaataagtggagtgtccggggttcgaaccccggtccctaa 50144661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 8175859 - 8175813
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||    
T  8175859 tagaattcaccttataaggtgaataagtggggtgttcggagttcgaa 8175813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 14271899 - 14271969
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| || ||||| || |||||||||| ||||||| ||||||| || ||||| |||||||||||    
T  14271899 ttttttgtcagatagtctaatggctagaattcaccttataagatgaataaatgaggtgtccggggttcgaa 14271969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 14868778 - 14868689
Alignment:
Q  142 ttcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||| ||| ||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  14868778 ttcacttt-taaagtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 14868689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 20623773 - 20623867
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| | | |||||||  | | |||||| ||||||||||  |||||||| | ||||||| ||||    
T  20623773 tagaattcaccttataaggtgaataagtggggtgtcctgagttcgaaccctgatccctacatataataatgcattgtcctacaaactgagttatg 20623867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 31698656 - 31698586
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| || ||||  || |||||||||| ||||||| |||||||||| |||||||| ||||||||    
T  31698656 ttttttgtcagatagtctagtggctagaattcaccttataagatgaataagtggggtgttcgaggttcgaa 31698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 34344750 - 34344816
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggtt 179  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| ||||| |||||||    
T  34344750 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggtt 34344816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 42271009 - 42271103
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||  ||||| ||| |||||||  |||  ||||  |||||| |||  |||||||| ||||||||||||||    
T  42271009 tagaattcaccttataaggtgaataagtagggtgtccggagttcgaaccccggcccctgcatataacaatgcattgtcctaccaactgagctatg 42271103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 46328920 - 46328966
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  46328920 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 46328966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 50724490 - 50724420
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || ||||||||||||| ||||||||||||||| ||||| || ||||||||    
T  50724490 ttttttgtcaggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaa 50724420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 50788358 - 50788428
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || ||||||||||||| ||||||||||||||| ||||| || ||||||||    
T  50788358 ttttttgtcaggtagcctagtggctagaattcactttttaaggtgaataagtggggtgtccgaggttcgaa 50788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 54983677 - 54983747
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| | ||  || |||||||||| ||||||||||||||| || ||||| |||||||||||    
T  54983677 ttttttgtcaggtagtttagtggctagaattcaccttataaggtgaataaatggggtgtccggggttcgaa 54983747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 16006499 - 16006548
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| |||||||||||||||||| |||||  ||||||||||    
T  16006499 ggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaa 16006548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 30157104 - 30157055
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  30157104 ggttagaattcaccttataaggtgaataagttgggtgtccggggttcgaa 30157055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 35477830 - 35477761
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataat 206  Q
    |||||||||| |||||||||||||||||| ||||| ||| |||||||  |||   |||||||||||||||    
T  35477830 tagaattcaccttataaggtgaataagtggggtgtccggagttcgaactccgacacctaaatataataat 35477761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 38682251 - 38682348
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| ||||||| ||||||||   ||||| |||| ||||||| |||  ||||  |||||||||| ||||||||| |||| ||| |||||    
T  38682251 ggttagaattcaccttataagatgaataaggagggtgtccgggattcgaatcccgacccctgcatataataatgtattgtcctaccaaatgaactatg 38682348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 49019285 - 49019188
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||| |||||||||||||||||| |||||  | | ||||||  |||  ||||| ||||||||||  |||||| | |||||||| |||||    
T  49019285 ggttagaattcaccttataaggtgaataagtgcggtgtctgagattcgaaccccgacccctacatataataatgcattgtcttaccaactgaactatg 49019188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 9625078 - 9624987
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  9625078 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 9624987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 27183681 - 27183772
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  27183681 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 27183772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 37059568 - 37059500
Alignment:
Q  115 ttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||| | ||  ||||||||||||  ||||||| |||||||||| |||||||||| ||||||    
T  37059568 ttttgtcaggtagtttagtggttagaattcatcttataagatgaataagtgaggtgttcgggattcgaa 37059500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 48516083 - 48516162
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    ||||||||||||||||| |||||||| || |||||  |||||||||||  |   ||||| |||||||||| |||||||||    
T  48516083 tagaattcactttataaagtgaataaatggggtgtatggggttcgaatttcagcccctacatataataatgtattgtcct 48516162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 3955407 - 3955361
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| ||| ||||||||||| ||||| |||||||||||    
T  3955407 tagaattcactttttaaagtgaataagtggggtgtccggggttcgaa 3955361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 27066709 - 27066663
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| | |||||||||||||||| ||||| |||||||||||    
T  27066709 tagaattcacctcataaggtgaataagtggggtgtccggggttcgaa 27066663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 48821083 - 48821017
Alignment:
Q  117 ttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||  |||  ||||| ||||||| ||||||||||||||||||  ||||||| ||||||||    
T  48821083 ttgtcaggtagcctagtggttaaaattcaccttataaggtgaataagtgaagtgttcgaggttcgaa 48821017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 53870957 - 53870839
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||| |  |||||||||| |||||| ||||||||||| ||||| ||| |||| ||| ||| |||||  |||| |||||  |||     
T  53870957 ttttttgtcaggtagcctaatgactagaattcaccttataatgtgaataagtggggtgtccggagttctaattccgatccctgcatatcataatgcatta 53870858  T
Q  213 tcctgccaactgagctatg 231  Q
    || | ||||| ||||||||    
T  53870857 tcttaccaaccgagctatg 53870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 36476455 - 36476363
Alignment:
Q  139 gaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcc-tgccaactgagctatg 231  Q
    ||||||||||| ||| ||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||||| |||||| |||| ||||    
T  36476455 gaattcacttt-taaagtgaataagtggggtgttcggggttcgaactccggcccctgcatataataatgcattgtccgtgccaattgagttatg 36476363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 28951970 - 28951919
Alignment:
Q  134 ggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| || |  |||||||||||||| |||||||||||||||||    
T  28951970 ggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaa 28951919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 32080139 - 32080059
Alignment:
Q  152 aaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    |||||||||||||| |||||||||||||||||  |||  || || ||||||||||  ||   ||||| |||||||||||||    
T  32080139 aaggtgaataagtggggtgttcggggttcgaaccccgacccatacatataataattcatgcccctgcaaactgagctatgt 32080059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 44953135 - 44953203
Alignment:
Q  115 ttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||| || ||||  || |||||||||| ||||||||||||||| || |||||  ||||||||||    
T  44953135 ttttgtcagataatctagtggctagaattcacattataaggtgaataaatgaggtgtctggggttcgaa 44953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 30152840 - 30152748
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagcta 229  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||  |||  ||||| ||||||||||  |||||||| ||||||||||||    
T  30152840 tagaattcatcttataaggtgaataagtggggtgttcggggttcgaaccccgacccctatatataataatgcattgtcctaccaactgagcta 30152748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 25086942 - 25087025
Alignment:
Q  133 cggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    |||||||||||||| |||||||||||||||||| |||||| | ||||||||| ||| |||||| ||||||||||  ||||||||    
T  25086942 cggttagaattcaccttataaggtgaataagtgaggtgtttgaggttcgaatcccggtccctatatataataatgcattgtcct 25087025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 30644268 - 30644175
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| |||||||||||||||||| |||||  |||||||||| ||||  ||||  ||||||||||  |||||||| |||||||||||||    
T  30644268 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaacaccggcccctgcatataataatgcattgtcctaccaactgagctat 30644175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 21086227 - 21086108
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||| || || ||||||  |||||||||||||||||  ||||| ||| |||||||   || |||||  ||||||||||  ||||    
T  21086227 ttttttgtcaggtaatctaatggctaaaattcatcttataaggtgaataagttgggtgtccggagttcgaacttcgatccctgcatataataatgcattg 21086128  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| |||||||||||||||    
T  21086127 tcctaccaactgagctatgt 21086108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 46337839 - 46337959
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagt-gtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    ||||||||||||||  |||  || ||||||||| |||||||||||||||||| | ||||| | |||||||||  ||| |||||  ||||||||||  |||    
T  46337839 ttttttgtcaggtagcctagtggctagaattcaatttataaggtgaataagtgggggtgtccagggttcgaaccccgatccctgcatataataatgcatt 46337938  T
Q  212 gtcctgccaactgagctatgt 232  Q
    ||||| |||||||| ||||||    
T  46337939 gtcctaccaactgaactatgt 46337959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 4169199 - 4169132
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||||||||||  |||  || ||||||||||||||||||||||||||||| ||||| ||||||||    
T  4169199 ttttttgtcaggtaacctagtggctagaattcactttataaggtgaataagtggggtgtccggggttc 4169132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 21285349 - 21285444
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  |||||| |||  ||||| ||||||||||||||||||    
T  21285349 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtccctgccaactgagctatg 21285444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 45198070 - 45198141
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    |||||| ||||||| ||||| || |||||||||| ||||||||||||||| || ||||| ||||||||||||    
T  45198070 ttttttttcaggtagtctaatggctagaattcaccttataaggtgaataaatggggtgtccggggttcgaat 45198141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 2756424 - 2756522
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatgt 232  Q
    ||||||||||||||||||||||| ||||||||  || ||||| |||||||  | | ||| |  ||||||||||  |||||||| |||||||||||||||    
T  2756424 ggttagaattcactttataaggttaataagtggcgtattcggagttcgaaccctgatccttgtatataataattcattgtcctaccaactgagctatgt 2756522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 8725133 - 8725226
Alignment:
Q  137 tagaattcac-tttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||  ||| | |||  ||||||||||  || ||||| |||||||||||||    
T  8725133 tagaattcacctttataaggtgaataagtggggtgttcggggttcgaaccccggt-cctgcatataataatgcatcgtcctaccaactgagctat 8725226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 22965930 - 22966048
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||| ||| ||||  ||||||||||||| |||||||||||||||||| |||||  ||||||||||   ||  ||||  ||||||||||  ||||    
T  22965930 tttttggtcatgtagtctagtggttagaattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataataatgcattg 22966029  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  22966030 tcctaccaattgagctatg 22966048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 47552312 - 47552218
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||  ||||| |||||||||||  |||  || |  ||||||||||  |||||||| ||||||||||||||    
T  47552312 tagaattcaccttataaggtgaataagtagggtgtccggggttcgaaccccggcccttgcatataataatgcattgtcctaccaactgagctatg 47552218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 230
Target Start/End: Complemental strand, 5787560 - 5787467
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| |||||||||||||||||| |||||| ||||||| ||  |||  ||||  ||||||||||  |||||||| |||| ||||||||    
T  5787560 tagaattcaccttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatataataatgcattgtcctaccaattgagctat 5787467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 3595386 - 3595339
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaat 184  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||    
T  3595386 tagaattcaccttataaggtgaataattggggtgttcggggttcgaat 3595339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 8724480 - 8724385
Alignment:
Q  136 ttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||| |||||||||||||||||| ||||| || ||||||| | |||  | ||  |||||||||| |||| |||| |||||||| |||||    
T  8724480 ttagaattcaccttataaggtgaataagtggggtgtccgaggttcgattcccgacctctgcatataataatgtattatcctaccaactgaactatg 8724385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 14102584 - 14102517
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||||||||||  |||   |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  14102584 ttttttgtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtccggggttc 14102517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 14412601 - 14412534
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||||||||||  |||   |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  14412601 ttttttgtcaggtagcctagtagttagaattcaccttataaggtgaataagtggggtgtccggggttc 14412534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 29658268 - 29658363
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtc-ctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  ||||  |||||| |||  |||||| ||||||| |||||||||    
T  29658268 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatgcattgtcgctgccaattgagctatg 29658363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 36315966 - 36316064
Alignment:
Q  135 gttagaattcactttata--aggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||||||||  ||||||||||||| ||||| || ||||||||  |||  ||||  ||||||||||  ||| |||| ||||||||||||||    
T  36315966 gttagaattcactttatataaggtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatgcattatcctaccaactgagctatg 36316064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 46716429 - 46716338
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||| ||||||||| |||||||| ||||||| |||||||||  |||  | ||  ||||||||||  |||||||| ||||||||||||||    
T  46716429 aattcaccttataaggtaaataagtggggtgttcagggttcgaaccccgacctctgcatataataatgcattgtcctaccaactgagctatg 46716338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 2261480 - 2261574
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||  ||||| |||| ||||||  |||  ||||  ||||||||||  |||||||| |||| |||||||||    
T  2261480 tagaattcaccttataaggtgaataagttgggtgtccgggattcgaaccccggcccctgcatataataatgcattgtcctaccaattgagctatg 2261574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 8214233 - 8214175
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||| ||||||| ||||  ||||||||||||| |||||||||||||||||| |||||    
T  8214233 ttttttatcaggtagtctagtggttagaattcaccttataaggtgaataagtggggtgt 8214175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 33202526 - 33202596
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || |||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  33202526 ttttttgtcaggtagcctagtggctagaattcaccttataagatgaataagtggggtgtccggggttcgaa 33202596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 34948205 - 34948159
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  34948205 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 34948159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 43902532 - 43902578
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||    
T  43902532 tagaattcaccttataaggtgaataagtggggtgttcgtggttcgaa 43902578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 7262994 - 7263087
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| ||||||| ||||||| |  |||||||||||||||||  ||   | ||| ||||||||||  |||||||| |||||||||||||    
T  7262994 tagaattcaccttataagatgaataaatagggtgttcggggttcgaactccaacctctacatataataatgcattgtcctaccaactgagctat 7263087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 4104603 - 4104535
Alignment:
Q  115 ttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||| ||||  || || |||||| ||||||||||||||||||| ||||| |||| ||||||    
T  4104603 ttttgtcaggtagtctagtggctataattcattttataaggtgaataagtgaggtgtccgggattcgaa 4104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 42286452 - 42286380
Alignment:
Q  108 caatattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    |||| |||||||||||||| | ||  ||||||||||||| ||||||||| |||||||| ||||| ||| ||||    
T  42286452 caattttttttgtcaggtagtttattggttagaattcaccttataaggtaaataagtggggtgtccggtgttc 42286380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 11680719 - 11680778
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgtt 172  Q
    |||||||||||||| ||||  || |||||||||| ||||||||||||||| || ||||||    
T  11680719 ttttttgtcaggtaatctagtggctagaattcacattataaggtgaataaatggggtgtt 11680778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 14967605 - 14967724
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaat-aagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||||||| ||||  || |||||||||| ||||||| ||||| ||||| |||||  | ||||| ||  |||  ||||| ||||||||||  |||    
T  14967605 ttttttgtcaggtagtctagtggctagaattcaccttataagttgaataaagtgaggtgtctgaggttcaaaccccgacccctacatataataatgcatt 14967704  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||| ||||    
T  14967705 gtcctaccaactgagttatg 14967724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 15397081 - 15397200
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaat-aagtgtggtgttcggggttcgaataccgttccctaaatataataatctatt 211  Q
    |||||||||||||| ||||  || |||||||||| ||||||| ||||| ||||| |||||  | ||||| ||  |||  ||||| ||||||||||  |||    
T  15397081 ttttttgtcaggtagtctagtggctagaattcaccttataagttgaataaagtgaggtgtctgaggttcaaaccccgacccctacatataataatgcatt 15397180  T
Q  212 gtcctgccaactgagctatg 231  Q
    ||||| ||||||||| ||||    
T  15397181 gtcctaccaactgagttatg 15397200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 22660837 - 22660794
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||    
T  22660837 aattcactttataaggtaaataagtggggtgtttggggttcgaa 22660794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 38451986 - 38451867
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||||||| |||||| ||||||||||| ||||| |||| ||||||  |||  ||||  |||||| |||  ||||    
T  38451986 tttttggtcaggtagtctagtggctagaattcaccttataatgtgaataagtggggtgtccgggattcgaaccccggcccctgcatataacaatgcattg 38451887  T
Q  213 t-cctgccaactgagctatg 231  Q
    | |||| |||||||||||||    
T  38451886 tccctgtcaactgagctatg 38451867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 2366480 - 2366422
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    ||||| ||||||||  |||| || |||||||||| |||||||||||||||||| |||||    
T  2366480 tttttagtcaggtagcctaatggctagaattcaccttataaggtgaataagtggggtgt 2366422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 7908808 - 7908762
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||  |||||| ||||||||||    
T  7908808 tagaattcaccttataaggtgaataagtagggtgtttggggttcgaa 7908762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 27047723 - 27047805
Alignment:
Q  149 tataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||||| || ||||| || ||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  27047723 tataaggtgaataaatggggtgtccgaggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagctatg 27047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 42887253 - 42887207
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| ||||||||| |||||||| ||||| |||||||||||    
T  42887253 tagaattcaccttataaggtaaataagtggggtgtccggggttcgaa 42887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 45011630 - 45011700
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||| |||||||  |||| || |||||||||| |||||||||||||||||| ||| | || ||||||||    
T  45011630 ttttttatcaggtaccctaatggctagaattcaccttataaggtgaataagtggggtctccgaggttcgaa 45011700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 44843814 - 44843722
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataat 206  Q
    ||||||||||| || ||||  ||||||||||||| ||||||| ||||||| || |||| || |||||||||  |||  ||||| ||||||||||    
T  44843814 ttttttgtcagatagtctagtggttagaattcaccttataagatgaataaatggggtg-tccgggttcgaaccccgacccctacatataataat 44843722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 46243405 - 46243323
Alignment:
Q  124 gtattctaacggttaga---attcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataata 204  Q
    |||||||| ||||||||   |||||| ||| |||||||||||||| ||||||||| |||||||  ||| |||||| ||||||||    
T  46243405 gtattctagcggttagagaaattcacctta-aaggtgaataagtggggtgttcggagttcgaactccgatccctatatataata 46243323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 20527443 - 20527519
Alignment:
Q  155 gtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctat 230  Q
    ||||||||||| |||||||||||||||||  |||  ||||  |||||| |||  ||||| |||||||||||||||||    
T  20527443 gtgaataagtgaggtgttcggggttcgaactccggcccctgcatataacaatgcattgtccctgccaactgagctat 20527519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 32387140 - 32387215
Alignment:
Q  158 aataagtgtggtgttcggggttcgaata--ccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||| ||||||||||||||||| |  |||  ||||| |||||||||| |||| |||| ||||||||| ||||    
T  32387140 aataagtggggtgttcggggttcgaaaaccccggcccctacatataataatgtattatcctaccaactgagttatg 32387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 32158386 - 32158502
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  ||||    
T  32158386 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatataataatgcattg 32158485  T
Q  213 tcctgccaactgagcta 229  Q
    |||| |||| |||||||    
T  32158486 tcctaccaattgagcta 32158502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 843364 - 843458
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||  |||| ||||| ||||||||||  |||||| | ||||||||| ||||    
T  843364 tagaattcaatttataaggtgaataagtggggtgtccggggttcgaaccccgtcccctacatataataatgcattgtcataccaactgagatatg 843458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 2029100 - 2029210
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||| ||  |||  || |||||||||| |||||||||||||||||| |||||||||||||||||| |||  ||||  ||||||||||  ||||    
T  2029100 ttttttgtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgttcggggttcgaatcccgacccctgcatataataatacattg 2029199  T
Q  213 tcctgccaact 223  Q
    |||| ||||||    
T  2029200 tcctaccaact 2029210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 18478126 - 18478008
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||| || |||||||||| |||||||||||||||||| ||||| | |||||||||  |||  |||   ||||||||||  ||||    
T  18478126 ttttttgtcaggtagcctaatggctagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggccccagcatataataatgcattg 18478027  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  18478026 tcctaccaactgagctatg 18478008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 29096280 - 29096398
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||  || |||||||||| |||||||||||||||||| ||||| |||||||||||  |||  || |  ||||||||||  ||||    
T  29096280 ttttttgtcaggtagcctagtggctagaattcaccttataaggtgaataagtggggtgtccggggttcgaactccggcccttgcatataataatgcattg 29096379  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  29096380 tcctaccaactgagctatg 29096398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 30403873 - 30403755
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||   ||  ||||||||||||| |||||||||||||||||| ||||| |||||||| ||  |||  ||||  |||||||||| |||||    
T  30403873 ttttttgtcaggtagcttagtggttagaattcaccttataaggtgaataagtggggtgtccggggttcaaactccggcccctgtatataataatgtattg 30403774  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||| ||||    
T  30403773 tcctaccaactgagttatg 30403755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 42595843 - 42595746
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||| ||| |||| ||||||||||||| |||||||||||||| ||  ||| |||||  |||||||||| ||||||||| |||| |||||||||    
T  42595843 ggttagaatacaccttatgaggtgaataagtggggtgttcggggttcaaaccccggtccctgcatataataatgtattgtcctaccaattgagctatg 42595746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 6806612 - 6806731
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||| || |||||||||| |||||| |||||||||||  |||| |||||||||||| |||  ||||  |||||| |||  ||||    
T  6806612 ttttttgtcaggtagcctaatggctagaattcaccttataatgtgaataagtggagtgtccggggttcgaatcccgacccctgcatataacaatgcattg 6806711  T
Q  213 tc-ctgccaactgagctatg 231  Q
    || |||||||||||||||||    
T  6806712 tctctgccaactgagctatg 6806731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 29841471 - 29841353
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  |||| || ||||||| || |||||||| ||||||||| ||||| ||||||||||||  ||  || |  ||||||||||  ||||    
T  29841471 ttttttgtcaggtagcctaatggctagaatttaccttataaggggaataagtggggtgtccggggttcgaatctcggcccttgcatataataatgcattg 29841372  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||||||||||||||    
T  29841371 tcctaccaactgagctatg 29841353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 230
Target Start/End: Original strand, 42455390 - 42455483
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctat 230  Q
    |||||||||| ||||||||||||||||||  |||| |||||||||||  |||  ||||  ||||||||||  |||||||| |||||||||||||    
T  42455390 tagaattcaccttataaggtgaataagtggagtgtccggggttcgaactccggcccctgcatataataatgcattgtcctaccaactgagctat 42455483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 18872606 - 18872526
Alignment:
Q  151 taaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||||||| |||||||||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  18872606 taaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatataataatgcattgtcctaccaactgagctatg 18872526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 13754129 - 13754010
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||||||||  ||| | |||||||||||| ||||||| ||||||| || ||||| ||  ||||||| | ||  ||||  |||||||||| |||||    
T  13754129 ttttttgtcaggtagcctagcagttagaattcaccttataagatgaataaatggggtgtccgacgttcgaacatcgacccctgcatataataatgtattg 13754030  T
Q  213 tcctgccaactgagctatgt 232  Q
    |||| ||||||||| |||||    
T  13754029 tcctaccaactgagttatgt 13754010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 6562021 - 6561907
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||||||| ||||  |||  ||||||||||||| |||||||||||||| ||| ||||||||| |||||||  ||| |||||  ||| ||||||  |||     
T  6562021 ttttttgtcgggtagcctagtggttagaattcaccttataaggtgaatatgtggggtgttcggagttcgaactccgatccctgcataaaataatgcatta 6561922  T
Q  213 tcctgccaactgagc 227  Q
    |||| ||||||||||    
T  6561921 tcctaccaactgagc 6561907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 19059000 - 19059094
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||||||||||||||| ||||| | |||||||||  |||  ||||  |||| |||||  |||||||| ||||||||||||||    
T  19059000 tagaattcaccttataaggtgaataagtggggtgtccagggttcgaaccccggcccctgcatatgataatgcattgtcctaccaactgagctatg 19059094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 3102106 - 3102218
Alignment:
Q  120 tcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgc 218  Q
    ||||||| ||||  || ||||||||||||||||| || ||||| || |||||||||||||||||  |||   |||| |||||| |||  ||||| |||||    
T  3102106 tcaggtaatctagtggctagaattcactttataaagtaaataaatggggtgttcggggttcgaaccccgactcctacatataacaatgcattgtccctgc 3102205  T
Q  219 caactgagctatg 231  Q
    |||||||||||||    
T  3102206 caactgagctatg 3102218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 8015960 - 8015888
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| | || ||||  || |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  8015960 tattttttgtcggttaatctagtgggtagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 8015888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 14487684 - 14487572
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| ||| ||||| || |||||||||| |||||||||||||||||| | | | || ||||||||  ||   ||||| ||||||||||  ||||    
T  14487684 ttttttgtcaagtagtctaatggctagaattcaccttataaggtgaataagtgggatatccgaggttcgaaccccaacccctacatataataatgcattg 14487585  T
Q  213 tcctgccaactga 225  Q
    |||| ||||||||    
T  14487584 tcctaccaactga 14487572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 2411290 - 2411384
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||||||||  |||||| |||||||||| |||||  ||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  2411290 tagaattcaccatataagatgaataagtggggtgtctggggttcgaactccggcccctgcatataataatacattgtcctaccaactgagctatg 2411384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 15978649 - 15978759
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| |||  |||  ||||| ||||||| |||||||||||||||||| |||||| ||||||| ||   | | ||||| ||||||||||  ||||    
T  15978649 ttttttgtcaagtagcctagtggttaaaattcaccttataaggtgaataagtggggtgtttggggttcaaacctcatcccctacatataataatacattg 15978748  T
Q  213 tcctgccaact 223  Q
    |||| ||||||    
T  15978749 tcctaccaact 15978759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 20945863 - 20945981
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    ||||| |||||||| ||||  || |||||||||| |||||||||||||||||| ||||| |||  ||||||  |||  ||||  ||||||||||  ||||    
T  20945863 tttttggtcaggtaatctagtggctagaattcaccttataaggtgaataagtggggtgtccggatttcgaaccccggcccctgcatataataatgcattg 20945962  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||| ||||    
T  20945963 tcctaccaattgagttatg 20945981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 29331366 - 29331296
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  || |||||||||| ||||||| ||||||||||  ||||||||||||||||    
T  29331366 ttttttgtcaggtagcctagtggctagaattcaccttataagatgaataagtggagtgttcggggttcgaa 29331296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 33800992 - 33800898
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    ||||| |||| |||||||||||||||||| |||||  ||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||| ||||    
T  33800992 tagaactcaccttataaggtgaataagtggggtgtctggggttcgaaccccggcccctgcatataataatgcattgtcctaccaactgagttatg 33800898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 34010660 - 34010539
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttata--aggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    |||||||||||||| ||||  |  |||||||||| |||||  |||||||||| || | ||| |||||||||||  |||  ||||| ||||||||||  ||    
T  34010660 ttttttgtcaggtagtctagtgactagaattcaccttatataaggtgaataaatgagatgtccggggttcgaactccgacccctatatataataatgcat 34010561  T
Q  211 tgtcctgccaactgagctatgt 232  Q
    |||||| |||||||| ||||||    
T  34010560 tgtcctaccaactgaactatgt 34010539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 38618677 - 38618723
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||    
T  38618677 tagaattcaccttataaggtgaataagtggggtgtccggggttcgaa 38618723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 3535906 - 3535978
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||  |||  |||||||||||||||| |  |||||||||||||| ||||| |||||||||||    
T  3535906 ttttttgtcaggtagcctagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaa 3535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 20735175 - 20735267
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatgt 232  Q
    |||||||||| ||| ||||||||||| ||||| |||| ||||||  |||  ||||| ||||||||||  ||||| |||||||||||||||||||    
T  20735175 aattcacttt-taaagtgaataagtggggtgtccgggattcgaaccccggcccctacatataataatgcattgtccctgccaactgagctatgt 20735267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 29144265 - 29144152
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| ||||  ||||||||||||| |||||| |||||||| || |||||  || |||| ||  |||  ||||  ||||||||||  ||||    
T  29144265 ttttttgtcaggtaatctagtggttagaattcaccttataacgtgaataaatggggtgtctggagttcaaaccccgacccctgcatataataatgcattg 29144166  T
Q  213 tcctgccaactgag 226  Q
    |||| |||||||||    
T  29144165 tcctaccaactgag 29144152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 1463966 - 1463875
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| ||||||||||||||||||    
T  1463966 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatataataatgcattgtccctgccaactgagctatg 1463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 9963539 - 9963487
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtg 165  Q
    ||||||||| ||||  |||  ||||||||||||||||||||||||||||||||    
T  9963539 ttttttgtcgggtagcctagtggttagaattcactttataaggtgaataagtg 9963487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 33729880 - 33729788
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgag 226  Q
    ||||||||||||| |||||||||||||||||| |||||  | | ||||||  |||  ||||  ||||||||||  |||||||| |||||||||    
T  33729880 ggttagaattcaccttataaggtgaataagtggggtgtctgagattcgaaccccggcccctgcatataataatgcattgtcctaccaactgag 33729788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 5157020 - 5156969
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagt 164  Q
    |||||||||||||| ||||  || |||||||||| |||||||||||||||||    
T  5157020 ttttttgtcaggtagtctagtggctagaattcaccttataaggtgaataagt 5156969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 6671756 - 6671875
Alignment:
Q  111 tattttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    |||||||||||||||| ||||  || |||||||||| ||||||| |||||||||| | ||| |||  ||||||  | | |  ||  ||||||||||  ||    
T  6671756 tattttttgtcaggtaatctagtggctagaattcaccttataagatgaataagtgagatgtccggaattcgaaccctgatttctgtatataataatgcat 6671855  T
Q  211 tgtcctgccaactgagctat 230  Q
    |||||| |||||||||||||    
T  6671856 tgtcctaccaactgagctat 6671875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 183
Target Start/End: Original strand, 18303050 - 18303120
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaa-ttcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| ||||  || ||||| |||||||| ||| ||||||||||| |||||||||||||||||    
T  18303050 ttttttgtcaggtagtctagtggctagaaattcacttt-taaagtgaataagtggggtgttcggggttcgaa 18303120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 1244723 - 1244769
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||  ||||||||||    
T  1244723 tagaattcaccttataaggtgaataagtggggtgtctggggttcgaa 1244769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 10943815 - 10943769
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||| ||| ||||||||||| ||||| |||||||||||    
T  10943815 tagaattcactttttaaagtgaataagtggggtgtccggggttcgaa 10943769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 20762380 - 20762334
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| ||||| | |||||||||    
T  20762380 tagaattcaccttataaggtgaataagtggggtgtccagggttcgaa 20762334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 27219559 - 27219653
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||| ||||||||||||| ||||| ||||||| |||  |||  || |  ||||||||||  |||||||| |||||| |||||||    
T  27219559 tagaattcaccttattaggtgaataagtggggtgtacggggtttgaaccccggcccatgcatataataatgcattgtcctaccaactaagctatg 27219653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 28378073 - 28378107
Alignment:
Q  149 tataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||||||||| |||||||||||||||||    
T  28378073 tataaggtgaataagtggggtgttcggggttcgaa 28378107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 231
Target Start/End: Original strand, 29106010 - 29106128
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||||||| |||   || ||||||| || |||||||||||||||||| |||||   |||||||||   ||  ||||  ||||||||||  ||||    
T  29106010 ttttttgtcaggtagtctggtggctagaattaaccttataaggtgaataagtggggtgtctagggttcgaacttcggcccctgcatataataatgcattg 29106109  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| |||| |||||||||    
T  29106110 tcctaccaattgagctatg 29106128  T

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Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 43166792 - 43166722
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    ||||||||||| ||  |||  || |||||||||| |||||||||||||||||| |||||| ||| ||||||    
T  43166792 ttttttgtcagatagcctagtggctagaattcaccttataaggtgaataagtggggtgtttgggattcgaa 43166722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 30255437 - 30255365
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttat--aaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| | ||  ||||| |||||||||| |  || |||||||||||||||||| ||||||||||    
T  30255437 ttttttgtcaggtagtttattggttataattcactttttttaaagtgaataagtgtggtgtttggggttcgaa 30255365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 171
Target Start/End: Original strand, 4216809 - 4216845
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgt 171  Q
    |||||||||||| |||||||||||||||||| |||||    
T  4216809 gttagaattcaccttataaggtgaataagtggggtgt 4216845  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 231
Target Start/End: Original strand, 4674815 - 4674906
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgt-cctgccaactgagctatg 231  Q
    |||||||||| ||| ||||||||||| ||||| |||||||||||  |||  ||||  ||||||||||  ||||| |||| |||||||||||||    
T  4674815 aattcacttt-taaagtgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatgcattgtccctgtcaactgagctatg 4674906  T

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Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 9408922 - 9409042
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||| ||||||| | ||  ||||||||||||  ||||||| ||||||| || ||||| |||||||||||  |||  ||||  |||||| |||  ||||    
T  9408922 ttttttatcaggtagtttagtggttagaattcatcttataagttgaataaatgaggtgtccggggttcgaactccgacccctgcatataacaatgcattg 9409021  T
Q  213 t-cctgccaactgagctatgt 232  Q
    | ||||||||||||| |||||    
T  9409022 tccctgccaactgagttatgt 9409042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 21959378 - 21959418
Alignment:
Q  140 aattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    ||||||| ||||||||||||||| || ||||||||||||||    
T  21959378 aattcaccttataaggtgaataaatggggtgttcggggttc 21959418  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 440524 - 440405
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcac--tttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctat 210  Q
    ||||||||||||||  |||  |||||||||||||  ||| ||||||||||||||| ||||||||||  |||||  |||  ||||| ||||||||||  ||    
T  440524 ttttttgtcaggtagcctagtggttagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaaccccggcccctacatataataatgcat 440425  T
Q  211 tgtcctgccaactgagctat 230  Q
      ||||||||||||||||||    
T  440424 gttcctgccaactgagctat 440405  T

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Target: scaffold0343 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 8662 - 8580
Alignment:
Q  134 ggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcct 216  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||||||  ||   ||||| ||||||||||  ||||||||    
T  8662 ggttagaattcacattataaggtgaataagtagggtgttcggggttcgaaccccaacccctacatataataatgcattgtcct 8580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 4422 - 4328
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||| |||||| |||||||||||  |||| |||||||||||  |||  ||||  |||||||||| |||||||||  |||||||||||||    
T  4422 tagaattcaccttataaagtgaataagtggagtgtccggggttcgaaccccgacccctgcatataataatgtattgtcctatcaactgagctatg 4328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 101954 - 101836
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||||| ||| ||||  || |||||||||| |||||||||||||||||| | |||| ||||||||||  |||  ||||  ||||||||||  |||     
T  101954 ttttttgtcacgtagtctagtggctagaattcaccttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgcatataataatgcatta 101855  T
Q  213 tcctgccaactgagctatg 231  Q
    |||| ||| ||||||||||    
T  101854 tcctaccagctgagctatg 101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 2611 - 2544
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttc 180  Q
    |||||||||||||| ||||  || | |||||||| |||||||||||||||||| ||||| ||||||||    
T  2611 ttttttgtcaggtagtctagtggctggaattcaccttataaggtgaataagtggggtgtccggggttc 2544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2098
Description:

Target: scaffold2098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 230
Target Start/End: Original strand, 586 - 703
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattg 212  Q
    |||||||| ||||| |||   ||||||||||||| |||||||||||||||||| |||||| ||| ||||||  ||   ||||| |||||| |||  ||||    
T  586 ttttttgttaggtaatctggtggttagaattcaccttataaggtgaataagtg-ggtgtttgggattcgaactccaacccctacatataacaatgcattg 684  T
Q  213 t-cctgccaactgagctat 230  Q
    | |||||||||||||||||    
T  685 tccctgccaactgagctat 703  T

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Target: scaffold0229 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 22522 - 22477
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||    
T  22522 tagaattcaccttataaggtgaataagtg-ggtgttcggggttcgaa 22477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 43693 - 43786
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||||||  ||  | |||  ||||||||||  |||||||| ||||||||||||||    
T  43693 tagatttcaccttataaggtgaataagtggggtgttcgaggttcgaaccccagt-cctgcatataataatgcattgtcctaccaactgagctatg 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 49937 - 49873
Alignment:
Q  119 gtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||| ||||  || |||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  49937 gtcaggtagtctagtggctagaattcaccttataagttgaataagtggggtgtacggggttcgaa 49873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 16930 - 16852
Alignment:
Q  152 aaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||||||||  |||||||||||||||||  |||  ||||  ||||||||||  |||||||| ||||||||||||||    
T  16930 aaggtgaataagtagggtgttcggggttcgaa-cccgacccctgcatataataatgcattgtcctaccaactgagctatg 16852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 843 - 809
Alignment:
Q  137 tagaattcactttataaggtgaataagtgtggtgt 171  Q
    ||||||||||||||||||||||||||||| |||||    
T  843 tagaattcactttataaggtgaataagtggggtgt 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 183
Target Start/End: Complemental strand, 31283 - 31214
Alignment:
Q  113 ttttttgtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||| ||||  || || |||||||||| ||| |||||||||| ||||||| ||||||||||    
T  31283 ttttttgtcaggtagtctagtggctaaaattcacttt-taaagtgaataagtatggtgtttggggttcgaa 31214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1990 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 1011 - 959
Alignment:
Q  119 gtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    ||||| |||||||  || |||||||||| |||||||||||||||||| |||||    
T  1011 gtcagatattctagtggctagaattcaccttataaggtgaataagtggggtgt 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 5392 - 5309
Alignment:
Q  147 tttataaggtgaataagtgtggtgttcggggttcgaataccgttccctaaatataataatctattgtcctgccaactgagctatg 231  Q
    |||||||| |||||||||| ||||| ||||||||||| | ||  ||||  ||||||||||  |||||||| |||| |||||||||    
T  5392 tttataagatgaataagtggggtgtccggggttcgaaca-cggcccctgcatataataatgcattgtcctaccaattgagctatg 5309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 47295 - 47347
Alignment:
Q  119 gtcaggtattctaacggttagaattcactttataaggtgaataagtgtggtgt 171  Q
    ||||| |||||||  || |||||||||| |||||||||||||||||| |||||    
T  47295 gtcagatattctagtggctagaattcaccttataaggtgaataagtggggtgt 47347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 234728 - 234776
Alignment:
Q  135 gttagaattcactttataaggtgaataagtgtggtgttcggggttcgaa 183  Q
    |||||||||||||||||||||||||||| || || ||  ||||||||||    
T  234728 gttagaattcactttataaggtgaataaatggggcgtctggggttcgaa 234776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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