View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3943_low_26 (Length: 393)

Name: NF3943_low_26
Description: NF3943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3943_low_26
NF3943_low_26
[»] chr5 (77 HSPs)
chr5 (216-379)||(14288100-14288267)
chr5 (14-186)||(24758971-24759138)
chr5 (14-187)||(4374769-4374940)
chr5 (14-187)||(26379203-26379374)
chr5 (14-187)||(24027775-24027943)
chr5 (14-219)||(3297708-3297908)
chr5 (14-187)||(2475189-2475357)
chr5 (14-187)||(16050689-16050857)
chr5 (14-187)||(31939749-31939918)
chr5 (17-187)||(31884580-31884745)
chr5 (16-184)||(42110679-42110843)
chr5 (14-187)||(5589382-5589550)
chr5 (14-185)||(27176393-27176560)
chr5 (14-185)||(42322865-42323031)
chr5 (17-187)||(665476-665642)
chr5 (14-97)||(6928360-6928443)
chr5 (33-185)||(25821231-25821377)
chr5 (14-186)||(32261632-32261798)
chr5 (14-187)||(29383642-29383811)
chr5 (16-186)||(2530075-2530242)
chr5 (19-213)||(15976476-15976666)
chr5 (29-187)||(43396524-43396680)
chr5 (16-187)||(10042782-10042954)
chr5 (16-187)||(29874584-29874750)
chr5 (15-187)||(36088567-36088736)
chr5 (16-186)||(3246819-3246985)
chr5 (16-187)||(19361641-19361805)
chr5 (16-97)||(39803853-39803934)
chr5 (25-186)||(28746235-28746390)
chr5 (21-184)||(36083790-36083948)
chr5 (25-97)||(40308340-40308412)
chr5 (16-97)||(789026-789108)
chr5 (25-187)||(8314829-8314987)
chr5 (16-90)||(40506809-40506884)
chr5 (29-186)||(42111726-42111877)
chr5 (14-95)||(28990940-28991022)
chr5 (16-185)||(42416790-42416955)
chr5 (17-187)||(789977-790142)
chr5 (25-184)||(7536645-7536800)
chr5 (25-97)||(19270905-19270977)
chr5 (16-91)||(31958390-31958465)
chr5 (25-97)||(37147067-37147139)
chr5 (17-185)||(30503448-30503613)
chr5 (17-185)||(30543791-30543956)
chr5 (141-187)||(14205524-14205570)
chr5 (19-187)||(39782952-39783116)
chr5 (26-97)||(1060706-1060776)
chr5 (30-97)||(14720185-14720252)
chr5 (16-97)||(29382576-29382659)
chr5 (141-187)||(30503673-30503719)
chr5 (141-187)||(30544016-30544062)
chr5 (42-95)||(15875753-15875806)
chr5 (42-97)||(2001506-2001561)
chr5 (27-97)||(3213231-3213300)
chr5 (35-97)||(16166292-16166354)
chr5 (141-186)||(16488044-16488089)
chr5 (141-186)||(31958299-31958344)
chr5 (36-97)||(35380505-35380566)
chr5 (141-185)||(788943-788987)
chr5 (25-97)||(18041185-18041256)
chr5 (14-68)||(28887173-28887228)
chr5 (42-97)||(36515058-36515113)
chr5 (25-68)||(37461872-37461914)
chr5 (143-186)||(40506719-40506762)
chr5 (141-187)||(3213148-3213194)
chr5 (35-97)||(43354523-43354584)
chr5 (141-178)||(15875673-15875710)
chr5 (150-187)||(28887299-28887336)
chr5 (150-187)||(36514975-36515012)
chr5 (45-97)||(14205433-14205485)
chr5 (30-85)||(28869358-28869413)
chr5 (21-67)||(2463637-2463683)
chr5 (21-83)||(36242319-36242381)
chr5 (150-187)||(14720303-14720340)
chr5 (56-97)||(30503759-30503800)
chr5 (56-97)||(30544102-30544143)
chr5 (45-97)||(33929003-33929055)
[»] chr6 (40 HSPs)
chr6 (14-213)||(18593499-18593693)
chr6 (14-187)||(3850216-3850384)
chr6 (14-187)||(559718-559886)
chr6 (14-187)||(32244368-32244535)
chr6 (14-187)||(20791537-20791705)
chr6 (14-186)||(28472212-28472380)
chr6 (14-184)||(33945738-33945906)
chr6 (16-215)||(7541098-7541291)
chr6 (14-97)||(24046560-24046643)
chr6 (16-186)||(6018490-6018656)
chr6 (25-187)||(34247671-34247827)
chr6 (25-187)||(17505488-17505645)
chr6 (16-186)||(29859401-29859569)
chr6 (25-92)||(6833553-6833620)
chr6 (25-97)||(5414562-5414634)
chr6 (25-97)||(34207003-34207075)
chr6 (25-92)||(10945711-10945778)
chr6 (41-187)||(19988908-19989048)
chr6 (25-97)||(24162794-24162866)
chr6 (25-97)||(29043209-29043281)
chr6 (24-97)||(3053915-3053987)
chr6 (25-97)||(173062-173134)
chr6 (30-97)||(8866970-8867037)
chr6 (25-96)||(18314008-18314078)
chr6 (141-187)||(34206927-34206973)
chr6 (141-185)||(10943067-10943111)
chr6 (141-187)||(172967-173013)
chr6 (141-187)||(24046478-24046524)
chr6 (25-68)||(247420-247462)
chr6 (25-68)||(12582487-12582529)
chr6 (141-180)||(29043319-29043358)
chr6 (35-97)||(28231075-28231136)
chr6 (26-68)||(29976317-29976359)
chr6 (141-187)||(29977738-29977784)
chr6 (141-182)||(5414482-5414523)
chr6 (141-185)||(10945820-10945864)
chr6 (150-184)||(24162914-24162948)
chr6 (25-78)||(33976004-33976056)
chr6 (150-187)||(33976119-33976156)
chr6 (53-97)||(8872681-8872725)
[»] chr4 (85 HSPs)
chr4 (14-187)||(7400123-7400292)
chr4 (14-187)||(13890909-13891079)
chr4 (14-187)||(53274618-53274787)
chr4 (14-187)||(55208400-55208571)
chr4 (14-187)||(7365786-7365954)
chr4 (12-187)||(11200821-11200992)
chr4 (14-187)||(1166629-1166796)
chr4 (14-187)||(1169111-1169278)
chr4 (14-187)||(26111368-26111539)
chr4 (14-187)||(27288389-27288557)
chr4 (14-187)||(55991809-55991979)
chr4 (15-187)||(17624651-17624821)
chr4 (14-187)||(32206509-32206679)
chr4 (14-187)||(40950935-40951103)
chr4 (16-215)||(28116721-28116924)
chr4 (14-184)||(34264550-34264715)
chr4 (14-187)||(55188160-55188328)
chr4 (14-97)||(10137883-10137966)
chr4 (14-97)||(6940178-6940261)
chr4 (14-184)||(11966923-11967087)
chr4 (14-187)||(36189974-36190142)
chr4 (16-187)||(8847929-8848097)
chr4 (16-187)||(17976438-17976604)
chr4 (16-185)||(23628826-23628990)
chr4 (14-97)||(29099625-29099708)
chr4 (16-97)||(18138327-18138408)
chr4 (17-186)||(24303720-24303884)
chr4 (25-97)||(26097651-26097723)
chr4 (15-97)||(32200716-32200799)
chr4 (16-186)||(37873560-37873728)
chr4 (25-97)||(11180909-11180981)
chr4 (25-187)||(39651736-39651889)
chr4 (25-97)||(41144305-41144377)
chr4 (25-97)||(43117519-43117591)
chr4 (25-187)||(46045716-46045867)
chr4 (25-186)||(28361410-28361565)
chr4 (16-97)||(20681186-20681268)
chr4 (35-187)||(32139419-32139573)
chr4 (16-97)||(49125536-49125618)
chr4 (17-97)||(40665513-40665593)
chr4 (25-97)||(22556965-22557037)
chr4 (25-97)||(40849729-40849801)
chr4 (24-187)||(8151202-8151359)
chr4 (25-187)||(346520-346679)
chr4 (17-97)||(24631102-24631181)
chr4 (25-92)||(8654320-8654386)
chr4 (19-66)||(34663865-34663912)
chr4 (142-187)||(45019181-45019226)
chr4 (39-92)||(51153499-51153552)
chr4 (110-187)||(34663936-34664012)
chr4 (16-90)||(51187608-51187683)
chr4 (141-187)||(32200633-32200679)
chr4 (17-66)||(45472468-45472518)
chr4 (141-187)||(52620733-52620779)
chr4 (37-97)||(25881932-25881992)
chr4 (29-97)||(30071346-30071414)
chr4 (142-186)||(34664934-34664978)
chr4 (142-185)||(18138452-18138495)
chr4 (142-185)||(49125663-49125706)
chr4 (16-66)||(52620629-52620680)
chr4 (142-187)||(10581901-10581946)
chr4 (45-97)||(40952041-40952093)
chr4 (14-50)||(45019226-45019262)
chr4 (25-68)||(10262027-10262069)
chr4 (25-68)||(21562386-21562428)
chr4 (25-68)||(24080098-24080140)
chr4 (25-68)||(43329907-43329949)
chr4 (23-97)||(9097470-9097543)
chr4 (142-187)||(20681304-20681348)
chr4 (36-97)||(29346227-29346287)
chr4 (36-97)||(35831991-35832051)
chr4 (142-187)||(44856696-44856741)
chr4 (25-68)||(26926968-26927010)
chr4 (141-180)||(43117629-43117668)
chr4 (25-68)||(51449973-51450015)
chr4 (142-187)||(8654230-8654276)
chr4 (141-187)||(9097387-9097433)
chr4 (141-187)||(24631018-24631064)
chr4 (141-187)||(41106052-41106098)
chr4 (24-73)||(18002494-18002543)
chr4 (42-83)||(41105971-41106012)
chr4 (141-185)||(18002441-18002484)
chr4 (35-95)||(26871609-26871668)
chr4 (141-173)||(30071452-30071484)
chr4 (141-185)||(40952131-40952175)
[»] chr2 (47 HSPs)
chr2 (14-215)||(970945-971142)
chr2 (14-187)||(8878111-8878280)
chr2 (16-187)||(7274664-7274831)
chr2 (14-187)||(36085861-36086030)
chr2 (14-187)||(1835677-1835844)
chr2 (14-187)||(31972274-31972442)
chr2 (14-187)||(5166258-5166427)
chr2 (17-182)||(24926005-24926165)
chr2 (15-187)||(8683652-8683819)
chr2 (14-187)||(3324178-3324347)
chr2 (17-184)||(4631203-4631369)
chr2 (14-187)||(18166749-18166916)
chr2 (16-187)||(3243209-3243377)
chr2 (14-97)||(7233015-7233098)
chr2 (16-187)||(668206-668375)
chr2 (14-187)||(17032728-17032896)
chr2 (25-187)||(3079720-3079876)
chr2 (25-187)||(34912654-34912810)
chr2 (25-187)||(40202218-40202374)
chr2 (51-187)||(20313162-20313294)
chr2 (17-182)||(36078481-36078637)
chr2 (17-185)||(9799239-9799405)
chr2 (16-97)||(38879129-38879211)
chr2 (25-187)||(10120612-10120770)
chr2 (25-184)||(1117981-1118136)
chr2 (25-187)||(35423789-35423939)
chr2 (25-187)||(41452818-41452974)
chr2 (25-97)||(45474725-45474797)
chr2 (141-187)||(17051064-17051110)
chr2 (35-92)||(38709708-38709765)
chr2 (54-182)||(38959564-38959687)
chr2 (16-97)||(2180011-2180093)
chr2 (14-68)||(17051167-17051221)
chr2 (25-68)||(3708454-3708496)
chr2 (25-68)||(11868920-11868962)
chr2 (25-68)||(35360313-35360355)
chr2 (32-89)||(37522706-37522763)
chr2 (25-97)||(35287306-35287377)
chr2 (46-97)||(1692624-1692675)
chr2 (141-184)||(35287226-35287269)
chr2 (141-187)||(2180132-2180178)
chr2 (141-187)||(13549490-13549536)
chr2 (149-187)||(32292307-32292345)
chr2 (141-183)||(38879249-38879291)
chr2 (141-175)||(45474836-45474870)
chr2 (141-185)||(20641972-20642015)
chr2 (25-73)||(20642025-20642073)
[»] scaffold0481 (2 HSPs)
scaffold0481 (17-187)||(7442-7610)
scaffold0481 (17-184)||(4431-4592)
[»] chr8 (80 HSPs)
chr8 (17-187)||(17313456-17313621)
chr8 (14-187)||(17045924-17046093)
chr8 (14-187)||(27467702-27467872)
chr8 (14-187)||(34805779-34805949)
chr8 (14-187)||(7219369-7219537)
chr8 (14-187)||(14718857-14719025)
chr8 (14-187)||(16239083-16239251)
chr8 (14-187)||(39685413-39685581)
chr8 (14-187)||(41360980-41361148)
chr8 (14-187)||(43817879-43818047)
chr8 (14-187)||(16845018-16845186)
chr8 (16-187)||(38139303-38139471)
chr8 (17-187)||(44602854-44603017)
chr8 (14-187)||(11924757-11924926)
chr8 (16-187)||(44908488-44908649)
chr8 (17-187)||(169620-169786)
chr8 (12-97)||(2184410-2184495)
chr8 (14-97)||(36216576-36216659)
chr8 (17-184)||(6816024-6816189)
chr8 (14-184)||(26518714-26518879)
chr8 (18-187)||(39485942-39486108)
chr8 (16-97)||(36059276-36059358)
chr8 (16-187)||(37034816-37034984)
chr8 (40-219)||(39997991-39998166)
chr8 (25-187)||(38137634-38137791)
chr8 (29-187)||(39525458-39525610)
chr8 (25-182)||(45138971-45139122)
chr8 (16-97)||(1877578-1877659)
chr8 (17-97)||(2190647-2190728)
chr8 (25-187)||(11579194-11579350)
chr8 (38-187)||(41526324-41526467)
chr8 (16-89)||(34997523-34997596)
chr8 (25-97)||(38909288-38909360)
chr8 (25-97)||(42844281-42844352)
chr8 (35-185)||(12261387-12261532)
chr8 (16-187)||(44655059-44655224)
chr8 (42-97)||(27914929-27914984)
chr8 (42-97)||(27961348-27961403)
chr8 (141-187)||(42844411-42844457)
chr8 (24-95)||(1922389-1922457)
chr8 (26-97)||(15310398-15310470)
chr8 (26-97)||(15490767-15490839)
chr8 (42-97)||(27748853-27748908)
chr8 (42-97)||(27877985-27878040)
chr8 (42-97)||(28018166-28018221)
chr8 (141-187)||(14449524-14449570)
chr8 (141-187)||(24511638-24511684)
chr8 (27-97)||(39201524-39201593)
chr8 (35-97)||(42984002-42984064)
chr8 (141-185)||(39140716-39140760)
chr8 (141-185)||(42984098-42984142)
chr8 (37-84)||(9275854-9275901)
chr8 (25-68)||(20665621-20665663)
chr8 (141-180)||(33848630-33848669)
chr8 (46-97)||(41904778-41904829)
chr8 (46-97)||(45296785-45296836)
chr8 (16-66)||(33848722-33848772)
chr8 (14-76)||(35916579-35916641)
chr8 (141-187)||(40048591-40048637)
chr8 (141-186)||(35916481-35916526)
chr8 (142-187)||(36059192-36059237)
chr8 (142-187)||(36216492-36216537)
chr8 (25-65)||(1921795-1921835)
chr8 (141-181)||(2184329-2184369)
chr8 (147-187)||(2190558-2190598)
chr8 (41-97)||(14449611-14449667)
chr8 (141-184)||(22947644-22947687)
chr8 (25-68)||(30550984-30551026)
chr8 (141-184)||(35004369-35004412)
chr8 (25-68)||(44215733-44215775)
chr8 (142-180)||(1877502-1877540)
chr8 (30-88)||(34325869-34325927)
chr8 (43-97)||(39140798-39140852)
chr8 (35-92)||(40048681-40048739)
chr8 (141-187)||(45296702-45296748)
chr8 (142-187)||(29868604-29868649)
chr8 (42-87)||(41903138-41903183)
chr8 (35-95)||(12251480-12251539)
chr8 (150-186)||(39201639-39201675)
chr8 (35-95)||(39443669-39443728)
[»] chr3 (83 HSPs)
chr3 (14-187)||(54510302-54510470)
chr3 (14-187)||(54741795-54741966)
chr3 (14-187)||(30268998-30269167)
chr3 (14-187)||(45599181-45599350)
chr3 (15-187)||(29500325-29500493)
chr3 (14-187)||(22346994-22347163)
chr3 (14-187)||(4018908-4019077)
chr3 (14-187)||(7040873-7041041)
chr3 (14-187)||(36592131-36592299)
chr3 (14-187)||(14587301-14587470)
chr3 (14-187)||(48545101-48545270)
chr3 (14-187)||(52674775-52674942)
chr3 (25-187)||(53022669-53022826)
chr3 (14-187)||(33932402-33932569)
chr3 (14-187)||(52461019-52461188)
chr3 (14-185)||(2909424-2909592)
chr3 (14-187)||(7265047-7265215)
chr3 (14-184)||(29450651-29450817)
chr3 (14-187)||(26881613-26881780)
chr3 (16-187)||(39721252-39721418)
chr3 (14-187)||(19536699-19536866)
chr3 (25-187)||(50739157-50739313)
chr3 (25-187)||(50773542-50773698)
chr3 (14-97)||(13450264-13450347)
chr3 (14-187)||(46757551-46757720)
chr3 (17-97)||(20849404-20849484)
chr3 (15-97)||(43316516-43316598)
chr3 (16-97)||(12101464-12101545)
chr3 (25-187)||(48961122-48961276)
chr3 (14-187)||(42187665-42187833)
chr3 (25-97)||(46090118-46090190)
chr3 (26-187)||(15496385-15496541)
chr3 (25-187)||(36987654-36987810)
chr3 (25-187)||(37013093-37013249)
chr3 (14-182)||(37413560-37413724)
chr3 (16-187)||(38361743-38361910)
chr3 (25-185)||(47719487-47719641)
chr3 (17-97)||(35690212-35690293)
chr3 (25-187)||(41990680-41990836)
chr3 (25-97)||(46850711-46850783)
chr3 (14-97)||(13337091-13337173)
chr3 (25-92)||(44762728-44762795)
chr3 (16-186)||(54203667-54203828)
chr3 (25-97)||(54113415-54113487)
chr3 (14-97)||(50933196-50933279)
chr3 (16-91)||(12996818-12996893)
chr3 (141-187)||(875880-875926)
chr3 (14-76)||(875825-875884)
chr3 (37-187)||(33899842-33899986)
chr3 (141-187)||(12101377-12101423)
chr3 (16-97)||(35906684-35906766)
chr3 (142-187)||(35529773-35529818)
chr3 (41-97)||(10617639-10617695)
chr3 (25-97)||(20996334-20996406)
chr3 (25-97)||(54835729-54835801)
chr3 (46-97)||(8238921-8238972)
chr3 (35-97)||(46088720-46088782)
chr3 (25-87)||(54195692-54195754)
chr3 (141-185)||(46850630-46850674)
chr3 (141-184)||(13450390-13450432)
chr3 (25-68)||(44075414-44075456)
chr3 (141-213)||(54113531-54113603)
chr3 (141-187)||(34433455-34433501)
chr3 (145-187)||(35690122-35690164)
chr3 (141-187)||(44541231-44541277)
chr3 (141-182)||(46090037-46090078)
chr3 (141-186)||(54795955-54796000)
chr3 (143-175)||(10617736-10617768)
chr3 (25-61)||(34433767-34433803)
chr3 (46-97)||(22762296-22762347)
chr3 (14-73)||(42617767-42617826)
chr3 (151-186)||(50933332-50933367)
chr3 (46-97)||(54796037-54796088)
chr3 (25-63)||(916278-916315)
chr3 (141-187)||(32754259-32754305)
chr3 (42-96)||(44541140-44541194)
chr3 (150-213)||(46088609-46088672)
chr3 (141-187)||(52464882-52464928)
chr3 (150-187)||(20849317-20849354)
chr3 (151-184)||(47670453-47670486)
chr3 (141-184)||(12996731-12996772)
chr3 (142-186)||(20996251-20996295)
chr3 (25-97)||(32754151-32754222)
[»] scaffold0197 (1 HSPs)
scaffold0197 (14-187)||(25699-25869)
[»] chr1 (70 HSPs)
chr1 (14-187)||(7833537-7833705)
chr1 (14-187)||(17585507-17585675)
chr1 (14-187)||(43120693-43120862)
chr1 (14-187)||(9574853-9575021)
chr1 (14-187)||(25659724-25659893)
chr1 (14-187)||(33373735-33373903)
chr1 (14-187)||(33895131-33895300)
chr1 (17-186)||(38802300-38802464)
chr1 (14-187)||(39326959-39327126)
chr1 (14-187)||(41901614-41901783)
chr1 (14-216)||(46587978-46588174)
chr1 (14-187)||(3265108-3265276)
chr1 (14-187)||(11583148-11583314)
chr1 (14-187)||(33642602-33642770)
chr1 (14-187)||(40432113-40432286)
chr1 (17-184)||(11754146-11754308)
chr1 (14-184)||(45104172-45104337)
chr1 (14-187)||(14487239-14487407)
chr1 (14-187)||(33894008-33894170)
chr1 (14-187)||(47037045-47037214)
chr1 (14-186)||(36165435-36165604)
chr1 (14-187)||(33831845-33832008)
chr1 (14-187)||(33818010-33818177)
chr1 (14-187)||(33877478-33877645)
chr1 (14-187)||(17249026-17249195)
chr1 (25-182)||(43123042-43123193)
chr1 (16-97)||(46040486-46040568)
chr1 (25-184)||(43119032-43119186)
chr1 (25-97)||(24473551-24473623)
chr1 (14-92)||(36952718-36952797)
chr1 (14-185)||(16097336-16097502)
chr1 (16-187)||(31638331-31638496)
chr1 (14-97)||(39879140-39879224)
chr1 (54-184)||(31215782-31215907)
chr1 (54-184)||(31221537-31221662)
chr1 (16-97)||(18091268-18091348)
chr1 (14-97)||(1322525-1322609)
chr1 (16-187)||(23730210-23730376)
chr1 (39-185)||(17366271-17366411)
chr1 (25-89)||(34652277-34652341)
chr1 (25-92)||(34078285-34078352)
chr1 (30-97)||(11606467-11606534)
chr1 (39-187)||(39729120-39729262)
chr1 (141-184)||(33933029-33933072)
chr1 (142-185)||(36952630-36952673)
chr1 (25-97)||(7308331-7308404)
chr1 (141-185)||(44819821-44819865)
chr1 (141-185)||(45589729-45589773)
chr1 (46-97)||(28568754-28568805)
chr1 (17-92)||(33932911-33932985)
chr1 (142-185)||(34652388-34652431)
chr1 (25-88)||(43124356-43124419)
chr1 (141-184)||(46040405-46040448)
chr1 (141-187)||(16033008-16033054)
chr1 (141-187)||(39879056-39879102)
chr1 (46-95)||(17670009-17670058)
chr1 (141-182)||(40648494-40648535)
chr1 (37-97)||(44065442-44065502)
chr1 (35-95)||(49223163-49223222)
chr1 (141-187)||(49571314-49571357)
chr1 (141-184)||(12247685-12247728)
chr1 (46-97)||(23910914-23910965)
chr1 (148-187)||(34078401-34078440)
chr1 (141-187)||(28568671-28568717)
chr1 (141-187)||(36680039-36680085)
chr1 (141-175)||(43808845-43808879)
chr1 (150-187)||(17670106-17670143)
chr1 (141-186)||(18091391-18091436)
chr1 (141-185)||(5542119-5542163)
chr1 (151-187)||(49223271-49223307)
[»] scaffold0166 (1 HSPs)
scaffold0166 (14-186)||(1465-1632)
[»] chr7 (70 HSPs)
chr7 (14-180)||(27031149-27031312)
chr7 (14-187)||(29448631-29448800)
chr7 (14-187)||(38045647-38045815)
chr7 (14-187)||(40239811-40239980)
chr7 (14-216)||(40789169-40789366)
chr7 (19-187)||(12907906-12908069)
chr7 (14-185)||(18956216-18956381)
chr7 (14-187)||(10999102-10999271)
chr7 (14-186)||(32960712-32960879)
chr7 (17-187)||(37669184-37669349)
chr7 (17-187)||(43156185-43156349)
chr7 (14-213)||(17278144-17278340)
chr7 (14-187)||(41426953-41427120)
chr7 (14-184)||(23639333-23639498)
chr7 (14-187)||(1448090-1448258)
chr7 (14-92)||(45620639-45620717)
chr7 (14-186)||(4407957-4408119)
chr7 (14-187)||(4399981-4400149)
chr7 (25-187)||(41343235-41343392)
chr7 (16-187)||(4406541-4406709)
chr7 (25-97)||(20482280-20482352)
chr7 (17-86)||(4615384-4615454)
chr7 (24-97)||(44651882-44651955)
chr7 (16-97)||(47840722-47840803)
chr7 (17-97)||(6607088-6607169)
chr7 (16-97)||(21134356-21134436)
chr7 (41-187)||(40035944-40036083)
chr7 (25-97)||(36769226-36769298)
chr7 (25-185)||(4404295-4404447)
chr7 (25-182)||(4492356-4492506)
chr7 (25-185)||(5483406-5483562)
chr7 (25-97)||(5526108-5526177)
chr7 (16-74)||(20135099-20135158)
chr7 (141-187)||(16933401-16933447)
chr7 (141-187)||(16938784-16938830)
chr7 (28-97)||(3840021-3840090)
chr7 (110-184)||(20135005-20135077)
chr7 (25-66)||(43111035-43111076)
chr7 (110-187)||(43111100-43111175)
chr7 (21-185)||(23154632-23154789)
chr7 (141-187)||(36765688-36765734)
chr7 (141-187)||(44651793-44651839)
chr7 (25-68)||(19036360-19036402)
chr7 (25-68)||(20718234-20718276)
chr7 (25-68)||(29488481-29488523)
chr7 (25-68)||(33232655-33232697)
chr7 (25-68)||(34284797-34284839)
chr7 (46-97)||(42915378-42915429)
chr7 (17-66)||(16933500-16933550)
chr7 (17-66)||(16938883-16938933)
chr7 (142-184)||(37143542-37143584)
chr7 (141-187)||(38049152-38049198)
chr7 (35-97)||(38049237-38049299)
chr7 (141-187)||(42828799-42828845)
chr7 (142-187)||(4616173-4616218)
chr7 (151-184)||(5526226-5526259)
chr7 (36-97)||(17816601-17816661)
chr7 (36-97)||(19050340-19050400)
chr7 (148-185)||(36769344-36769381)
chr7 (150-182)||(3840137-3840169)
chr7 (41-97)||(36765592-36765648)
chr7 (14-45)||(19758160-19758191)
chr7 (150-181)||(20482404-20482435)
chr7 (25-68)||(20762915-20762957)
chr7 (141-187)||(15641229-15641275)
chr7 (141-187)||(47171750-47171796)
chr7 (21-97)||(42828881-42828956)
chr7 (141-181)||(42915466-42915506)
chr7 (35-95)||(42995355-42995414)
chr7 (141-181)||(47840841-47840881)
[»] scaffold0178 (1 HSPs)
scaffold0178 (25-187)||(7204-7364)
[»] scaffold0024 (2 HSPs)
scaffold0024 (17-187)||(90374-90542)
scaffold0024 (24-187)||(110442-110600)
[»] scaffold0198 (1 HSPs)
scaffold0198 (25-187)||(15174-15333)
[»] scaffold0244 (2 HSPs)
scaffold0244 (16-97)||(7574-7656)
scaffold0244 (150-184)||(7493-7527)
[»] scaffold0020 (1 HSPs)
scaffold0020 (14-186)||(132647-132817)
[»] scaffold0768 (1 HSPs)
scaffold0768 (25-92)||(6308-6375)
[»] scaffold0003 (2 HSPs)
scaffold0003 (42-97)||(229101-229156)
scaffold0003 (141-187)||(229195-229241)
[»] scaffold1793 (1 HSPs)
scaffold1793 (141-187)||(182-228)
[»] scaffold0318 (2 HSPs)
scaffold0318 (42-97)||(1072-1127)
scaffold0318 (150-223)||(1174-1247)
[»] scaffold0027 (2 HSPs)
scaffold0027 (25-92)||(138034-138101)
scaffold0027 (141-187)||(137944-137990)
[»] scaffold1822 (1 HSPs)
scaffold1822 (141-187)||(356-402)
[»] scaffold0078 (1 HSPs)
scaffold0078 (37-97)||(5732-5793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (35-97)||(31572-31633)
[»] scaffold0006 (1 HSPs)
scaffold0006 (25-97)||(156569-156640)
[»] scaffold0016 (1 HSPs)
scaffold0016 (141-187)||(99491-99537)
[»] scaffold0095 (2 HSPs)
scaffold0095 (35-95)||(236-295)
scaffold0095 (35-95)||(1726-1785)
[»] scaffold0088 (1 HSPs)
scaffold0088 (35-95)||(55399-55458)
[»] scaffold0010 (2 HSPs)
scaffold0010 (21-97)||(50244-50319)
scaffold0010 (21-97)||(57777-57852)


Alignment Details
Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 216 - 379
Target Start/End: Original strand, 14288100 - 14288267
Alignment:
Q  216 atatgtttgataattcaaaaatgttgatttaatacattgtttttaataatttggcaactgaaattaatcaaatgtgaaccaatctagagtgaaa--tagt 313  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||  |  |    
T  14288100 atatgtttgataattcaaacatgttgatttaatacattgtttttaataatttggcaactgaagttaatcaaatgtgaaccaatccagagtaaaatgtttt 14288199  T
Q  314 atatcagaatttgaaaaatctacca--cccacacccacccactcagctaaacagacagcatagcatac 379  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||    
T  14288200 atatcagaatttgaaaaatctaccacccccacacccactcactcagctaaacaaacagcatagcatac 14288267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 24758971 - 24759138
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  24758971 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 24759067  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  24759068 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 24759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 4374940 - 4374769
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||            ||||    
T  4374940 cagacaccaccaaaaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaaaaataaa 4374841  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4374840 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4374769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 26379203 - 26379374
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  26379203 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaacttaaaaaaaaaaataaa 26379302  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||| |||||||    
T  26379303 gaaaccaaacagctttagcc--tttttcttagagagctttattttaactttgttttaaagtagcttgtagaccg 26379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 24027943 - 24027775
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||            ||||    
T  24027943 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagagct---aaaaaaaaataaa 24027847  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  24027846 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 24027775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 3297908 - 3297708
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || |            ||||    
T  3297908 cagacaccaccaaaaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaatt---acaaaaaaataaa 3297812  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  3297811 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 3297714  T
Q  214 aaatat 219  Q
    | ||||    
T  3297713 acatat 3297708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 2475357 - 2475189
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  2475357 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 2475261  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| ||||||||||       |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  2475260 gaaaccaaatagctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagtttttagaccg 2475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 16050857 - 16050689
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  16050857 cagacaccaccaaaaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 16050761  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16050760 gaaaccaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaaatagcttttagaccg 16050689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 31939918 - 31939749
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||            ||||    
T  31939918 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 31939821  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  31939820 gaaaccaaacaactttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 31939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 31884745 - 31884580
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  31884745 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 31884649  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||       |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  31884648 accaaacagctttagcc--tttttcttatagagttttattttaactttattttaaagtagcttttagaccg 31884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 42110679 - 42110843
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            ||||||    
T  42110679 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaataaaga 42110776  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||||       |||||||| ||||||||||||||| |||||||||||||||||||    
T  42110777 aaccaaacagctttagcc--tttttcttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 5589550 - 5589382
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  5589550 cagacaccaccaaaaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 5589453  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5589452 gaaaccaaacagctttagcc--tttttcttaaagagcttta-tttaactttgttttaaagtagcttttagaccg 5589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 27176560 - 27176393
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            |||    
T  27176560 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact---aaaaaaaaataa 27176464  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||| || |||||||||    
T  27176463 agaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaaataccttttagac 27176393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 42322865 - 42323031
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||            ||||    
T  42322865 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact---aaaaacaaataaa 42322961  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||| ||||||||       || ||||||||||||||||||||||||||||||||||||||||||    
T  42322962 gaaaccaaacaactttagcc--tttttctcaaagagctttattttaactttgttttaaagtagcttttagac 42323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 665642 - 665476
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||            |||||||    
T  665642 acaccaccaaaaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaagaa 665545  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||| |       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  665544 accaaacaactttagtc--tttttcttaaagagctttattttaaatttgttttaaagtagcttttagaccg 665476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6928443 - 6928360
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6928443 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 25821231 - 25821377
Alignment:
Q  33 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagc 132  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||| |||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttagc 25821326  T
Q  133 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |       |||||||||||||||||||||||||||||||||||||||||||||    
T  25821327 c--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 25821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 32261798 - 32261632
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||            ||||    
T  32261798 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 32261702  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||  |||||||       || |||||||||||||||||||||||||||||||||||||||||||    
T  32261701 gaaaccaaaca-atttagcc--tttttctgaaagagctttattttaactttgttttaaagtagcttttagacc 32261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 29383811 - 29383642
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||| || ||||            |||    
T  29383811 cagacaccaccaaaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaact---aaaaaaaaataa 29383715  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29383714 agaaaccaaacaactttagcc--tttttcttaaagacctttattttaactttgttttaaagtagcttttagaccg 29383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 2530075 - 2530242
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  2530075 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--gaaaaaaaaataaag 2530172  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||  |||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  2530173 aaaccaaacaattttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagacc 2530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 15976476 - 15976666
Alignment:
Q  19 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 118  Q
    |||||||||||| || | |||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||            |||||||||    
T  15976476 accaccaaaaaaaaaaagattcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact--aaaaaaaaaataaagaaac 15976573  T
Q  119 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    |||||||||||||||        |||||||||||||||||||||||||||||||||  |||||||||||       ||||| |||||||||||||    
T  15976574 caaacagctttagcctttttt--ttaaagagctttattttaactttgttttaaagtgacttttagaccgaaaaaaagtctggtcaaacggtacct 15976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 43396524 - 43396680
Alignment:
Q  29 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 128  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||             ||| ||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaactaaagaaaaaaaaaaaaaaaaccaaacagctt 43396623  T
Q  129 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  43396624 tagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 43396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 10042782 - 10042954
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac--tnnnnnnnnnnnntaa 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| | |||               |||    
T  10042782 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaacaaaaataaaataaaataa 10042881  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  10042882 agaaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 10042954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 29874750 - 29874584
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||| || ||||            |||||    
T  29874750 gacaccaccaaaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaact----aaaaaaaataaag 29874655  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||        |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  29874654 aaaccaaacagctttagc--ttttttcttaaagaactttatttttactttgttttaaagtagcttttagaccg 29874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 36088567 - 36088736
Alignment:
Q  15 agacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||| || |            ||||    
T  36088567 agacaccaccaaaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaaat---aaaaaaaaataaa 36088663  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||  ||||||||       ||||||| |||||||||||||||||||||||||||||||||||||||    
T  36088664 gaaaccaaacgactttagcc-ttctttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 36088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 3246819 - 3246985
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            |||||    
T  3246819 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact---aaaaaaaaataaag 3246915  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||||||| |        ||||||||| ||||||||||||||||||||||||||||||||||||    
T  3246916 aaaccaaacagctttaac--tttttccttaaagagttttattttaactttgttttaaagtagcttttagacc 3246985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 19361641 - 19361805
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||| |||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            ||||||    
T  19361641 gacatcaccaaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 19361736  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||        ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19361737 aaccaaacagctttagc--tttttccttaaagagctttattttaaccttgttttaaagtag-ttttagaccg 19361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 39803934 - 39803853
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||    
T  39803934 gacacaaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 28746390 - 28746235
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||| ||||||    
T  28746390 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaatcaaaca 28746295  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    | ||||  |       ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28746294 gtttta--cctttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 28746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 36083790 - 36083948
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaacca 120  Q
    ||||| |||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            |||||||||||    
T  36083790 caccacaaaaaaaaaaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---aaaaaaatataaagaaacca 36083886  T
Q  121 aacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||       ||||||| |||||||||||||||| ||||||||||| |||||||    
T  36083887 aacagctttagcc--attttcttaaagggctttattttaactttattttaaagtagtttttaga 36083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 40308340 - 40308412
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  40308340 aaaaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 789108 - 789026
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  789108 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 8314829 - 8314987
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||| |||| ||||            |||| ||||||||||    
T  8314829 aaaaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact--aaaaaaaaattaaaaaaaccaaaca 8314926  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8314927 actttag--ttttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 8314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 40506884 - 40506809
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 90  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  40506884 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactt 40506809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 42111877 - 42111726
Alignment:
Q  29 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 128  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||            |||||||| ||||||| ||    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataact----aaaaaaaataaagaaatcaaacagttt 42111782  T
Q  129 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    || |        |||||||| |||||||||||||||||||||||||||||||||||||    
T  42111781 taac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagacc 42111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 28991022 - 28990940
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaa 95  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||    
T  28991022 cagacaccatcataaaataataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaatagctttaaaa 28990940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 42416790 - 42416955
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| ||              |||||    
T  42416790 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa---taaaaaaaaaataaag 42416886  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||||| ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||    
T  42416887 aaaccaaacaactttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagac 42416955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 790142 - 789977
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            ||||||    
T  790142 acaccaccaaaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 790047  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| || |||| |        ||||||||||||||||||||||||||||||||||| |||||||||||    
T  790046 aaccaaatagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtaccttttagaccg 789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 7536645 - 7536800
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || |||||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  7536645 aaaaaaaaaaaaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaagaaaccaaaca 7536742  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
     |||||||        |||||||| |||||||||||||||||||||||||||||||||||    
T  7536743 actttagc--tttttccttaaagaactttattttaactttgttttaaagtagcttttaga 7536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 19270905 - 19270977
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||| ||||||||||    
T  19270905 aaaaaataataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaatagctttaaaact 19270977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 31958465 - 31958390
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 91  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||    
T  31958465 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataacttt 31958390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 37147067 - 37147139
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  37147067 aaaaaaaaaaaaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 30503613 - 30503448
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            ||||||    
T  30503613 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact--aaaaaaaaattaaaga 30503516  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||| ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30503515 aaccaaacaactttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30503448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 30543956 - 30543791
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| ||| |  |||||||| ||||||||||||| ||||            ||||||    
T  30543956 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact--aaaaaaaaattaaaga 30543859  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||| ||||| |        ||||||||| |||||||||||||||||||||||||||||||||||    
T  30543858 aaccaaacaactttaac--ttttttcttaaagagttttattttaactttgttttaaagtagcttttagac 30543791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 14205524 - 14205570
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14205524 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 14205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 39782952 - 39783116
Alignment:
Q  19 accaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||| |||||| || |||||| | ||||||||||||||||||| ||||||||| |||||||||||| ||||||            |||||||    
T  39782952 accaccaaaaaagtaataagtttaaagttgt-tacaatattttgccaaacaacttttaactgaaaaataactttcaaaactaaaaaataa---taaagaa 39783047  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||| |        |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  39783048 accaaacagctttaac--ttattccttaaagaactttattttaactttgttttaaagtagcttttaaaccg 39783116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 1060706 - 1060776
Alignment:
Q  26 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||| |||||||    
T  1060706 aaaaataataaattcaaagttt-gtacaatattttgtcaaacaatttttaacttaaaaataactctaaaact 1060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 14720185 - 14720252
Alignment:
Q  30 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||| ||||||| ||| || || ||||||| ||||||||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaatagctttaaaact 14720252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29382659 - 29382576
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||||| |||  |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29382659 gacaccaccaaaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 30503719 - 30503673
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30503719 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30503673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 30544062 - 30544016
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  30544062 cttaaagagctttattttaactttgttttaaagttgcttttagaccg 30544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 42 - 95
Target Start/End: Complemental strand, 15875806 - 15875753
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataactttaaaa 15875753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 2001506 - 2001561
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| |||||| ||||||| ||||||||| ||||||||||||||||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactttaaaact 2001561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 3213300 - 3213231
Alignment:
Q  27 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||| ||||||||||||| |||||| | |||||||  |||||| ||||||||||    
T  3213300 aaaataataaattcaaagttt-gtacaatattttgtcaaacaacatttaactttaaaatagctttaaaact 3213231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| |||||||| |||| ||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 16488089 - 16488044
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  16488089 cttaaagaactttattttaactttattttaaagtagcttttagacc 16488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 31958344 - 31958299
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  31958344 cttaaagagttttattttaactttgttttaaagtagtttttagacc 31958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  36 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||| |||||||| |||||||||||||||| ||||||||| |||| |||||||| ||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 788987 - 788943
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  788987 cttaaagagctttattttaagtttgttttaaagtaacttttagac 788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 18041256 - 18041185
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| |||| |||||| |||||||||| ||||| | ||||||| ||||||| ||||||||||    
T  18041256 aaaaaataataaatttaaag-tttgtaaaatattttgcgaaacaacatttaacttaaaaatagctttaaaact 18041185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 28887173 - 28887228
Alignment:
Q  14 cagacaccaccaaaaaataataaa-ttcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||| || ||||||||||| || ||||||||||||||||||||||||||||    
T  28887173 cagacaccatcataaaataataaaatttaaagttttgtacaatattttgccaaaca 28887228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 36515113 - 36515058
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| |||||||||||||| |||||||||  ||||||| |||||||||    
T  36515113 aagttttgtacattattttgccaaacaacttttaactttaaaataattttaaaact 36515058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 37461872 - 37461914
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  37461872 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 37461914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 40506762 - 40506719
Alignment:
Q  143 taaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  40506762 taaagagttttattttaactttgttttaaaatagcttttagacc 40506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 3213194 - 3213148
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  3213194 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 3213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 43354523 - 43354584
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  43354523 aaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 43354584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 15875710 - 15875673
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagct 178  Q
    |||||||| |||||||||||||||||||||||||||||    
T  15875710 cttaaagacctttattttaactttgttttaaagtagct 15875673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 28887299 - 28887336
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||| |||||||||||    
T  28887299 ctttattttaactttgttttaaagtaacttttagaccg 28887336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 36515012 - 36514975
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36515012 ctttattttaactttgttttaaaggagcttttagaccg 36514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  45 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||| |||||||||||||||| ||||||| | ||||||||||||| ||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 28869358 - 28869413
Alignment:
Q  30 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaat 85  Q
    |||| ||||| ||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  28869358 ataacaaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 2463637 - 2463683
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaac 67  Q
    ||||| |||| || ||||||||||||||||||||||||||| |||||    
T  2463637 caccacaaaaaaaaaaattcaaagttttgtacaatattttgtcaaac 2463683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 36242319 - 36242381
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaa 83  Q
    ||||| |||| || ||| |||||||||||||||||||||| |||||||  |||||||| ||||    
T  36242319 caccacaaaaaaaaaaaatcaaagttttgtacaatattttaccaaacaagttttaacttaaaa 36242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 14720303 - 14720340
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||| ||||||||||||||||||||||| ||||||||||    
T  14720303 cttaattttaactttgttttaaagtagtttttagaccg 14720340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  56 attttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  56 attttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 33929003 - 33929055
Alignment:
Q  45 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||| ||||||| | ||||||| |||| || ||||||||||    
T  33929003 ttttgtacaatatttttccaaacaacatttaacttaaaagtagctttaaaact 33929055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 9e-52; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 213
Target Start/End: Complemental strand, 18593693 - 18593499
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  18593693 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 18593597  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  18593596 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 18593499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 3850216 - 3850384
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  3850216 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 3850312  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3850313 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgtttgaaagtagcttttacaccg 3850384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 559718 - 559886
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  559718 cagacaccaccagaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaa 559814  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  559815 gaaaccaaacaactttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 32244368 - 32244535
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||            ||||    
T  32244368 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaact----aaaaaaaataaa 32244463  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32244464 gaaaccaaacagttttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 20791537 - 20791705
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  20791537 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 20791633  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||| ||| ||       |||||||||||||||||||||||||||||||||||  ||||||||||    
T  20791634 gaaaccaaacagccttaacc--tttttcttaaagagctttattttaactttgttttaaagtattttttagaccg 20791705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 28472212 - 28472380
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            ||||    
T  28472212 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaataaataaa 28472309  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||| ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  28472310 gaaaccaaacaactttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 28472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 33945906 - 33945738
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||              |||    
T  33945906 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaaccaaaaaaaaaaaaaaaa 33945807  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||| |||||||||||| |       |||||| |||||||||||||||||||||||||||| ||||||||    
T  33945806 gaaacaaaacagctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtatcttttaga 33945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 7541098 - 7541291
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||            ||||||    
T  7541098 gacaccagaaaaaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaaga 7541193  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaa 215  Q
    |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||    
T  7541194 aaccaaacagctttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacctaa 7541291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 24046643 - 24046560
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24046643 cagacaccaccaaaggataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 6018656 - 6018490
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| | ||            |||||    
T  6018656 gacaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagatct---aaaaaaaaataaag 6018560  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||||||| |        ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6018559 aaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtaacttttagacc 6018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 34247827 - 34247671
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  34247827 aaaaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 34247732  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  34247731 gctttaac--tttttccttaaagaactttattttaactttgttttaaagtagcttttagaccg 34247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 17505488 - 17505645
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||| ||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  17505488 aaaaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaactaaaaataaa---taaagaaaccaaaca 17505584  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||          |||||||||||||||||||||||||||||||||||||||||||||||    
T  17505585 gctttaa--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17505645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 29859401 - 29859569
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||  ||| ||||            |||||    
T  29859401 gacaccaccaaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaact-aaaaaaataaataaag 29859499  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||| ||||| |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  29859500 aaaccaaacaactttatc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 29859569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 6833553 - 6833620
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6833553 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 5414634 - 5414562
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  5414634 aaaaattaataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 34207075 - 34207003
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  34207075 aaaaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 10945711 - 10945778
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  10945711 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataacttta 10945778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 187
Target Start/End: Original strand, 19988908 - 19989048
Alignment:
Q  41 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 140  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||            |||||||||||||||||||||  |           
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact----ataaaaaataaagaaaccaaacagcttta--catttttt 19989001  T
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||    
T  19989002 ctaaaagagctttattttaactttgttttaaagtagattttagaccg 19989048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24162794 - 24162866
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||| ||||    
T  24162794 aaaaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 29043209 - 29043281
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || |||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29043209 aaaaaaaaaaaaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 3053987 - 3053915
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  3053987 caaaaaataataaatttaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 3053915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 173134 - 173062
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||||| |||| ||||    
T  173134 aaaaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 8866970 - 8867037
Alignment:
Q  30 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||  ||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 8867037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 18314008 - 18314078
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 96  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| | ||||| | |||||||||||||||||    
T  18314008 aaaaaataataaattcaaagttt-gtacaatattttgccacacaacatttaaattaaaaataactttaaaac 18314078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 34206973 - 34206927
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  34206973 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 34206927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 10943111 - 10943067
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  10943111 cttaaagagctttattttaactttgttttaaagtagattttagac 10943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 173013 - 172967
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  173013 cttaaagagttttattttaactttgttttaaagtagtttttagaccg 172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 24046524 - 24046478
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| || |||||||||||||||||||||||||||||||||||||    
T  24046524 cttaaatagttttattttaactttgttttaaagtagcttttagaccg 24046478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 247420 - 247462
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  247420 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 247462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 12582529 - 12582487
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12582529 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 12582487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 29043319 - 29043358
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttt 180  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  29043319 cttaaagagctctattttaactttgttttaaagtagcttt 29043358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 28231136 - 28231075
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  28231136 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 28231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 29976317 - 29976359
Alignment:
Q  26 aaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  29976317 aaaaataataaatttaaagttttgtacaatatttttccaaaca 29976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 29977738 - 29977784
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  29977738 cttaaagagctttatttaaactttgttttaaaatagtttttagaccg 29977784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 5414523 - 5414482
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  5414523 cttaaagagttttattttaactttgttttaaaatagctttta 5414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 10945820 - 10945864
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||    
T  10945820 cttaaagaactttattttaactttgttttaaagtaaattttagac 10945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 24162914 - 24162948
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||||||||||||| |||||||    
T  24162914 ctttattttaactttgttttaaagtagtttttaga 24162948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 33976004 - 33976056
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaact 78  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| | |||||||    
T  33976004 aaaaaataataaattcaaag-tttgtataatattttgtcaaacaacatttaact 33976056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 33976119 - 33976156
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  33976119 ctttattttaactttgttttgaagtaacttttagaccg 33976156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 8872681 - 8872725
Alignment:
Q  53 aatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||  |||||||| ||||||| ||||||||||    
T  8872681 aatattttgccaaacaagttttaacttaaaaatagctttaaaact 8872725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 7400292 - 7400123
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  7400292 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 7400195  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7400194 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 13891079 - 13890909
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  13891079 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 13890981  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  13890980 gaaaccaaacagctttaacc--ttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 13890909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 53274618 - 53274787
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  53274618 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 53274715  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53274716 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 55208571 - 55208400
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||            ||||    
T  55208571 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaactaaaaaaaaaaaataaa 55208472  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||    
T  55208471 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 55208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 7365786 - 7365954
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            ||||    
T  7365786 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaa 7365882  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7365883 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7365954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 11200821 - 11200992
Alignment:
Q  12 cacagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnnta 111  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||            ||    
T  11200821 cacagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact--aaaaaaaaaata 11200918  T
Q  112 aagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  11200919 aagaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 11200992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 1166629 - 1166796
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  1166629 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 1166724  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1166725 gaaaccaaacagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 1169111 - 1169278
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  1169111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 1169206  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  1169207 gaaaccaaacagttttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1169278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 26111368 - 26111539
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  26111368 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 26111466  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  26111467 gaaaccaaacagctttagcc-ttttatcttaaagaactttattttaactttgttttaaagtagcttttagaccg 26111539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 27288557 - 27288389
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  27288557 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaa 27288461  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27288460 gaaaccgaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 55991809 - 55991979
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||            ||||    
T  55991809 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaa 55991907  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  55991908 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 55991979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 17624651 - 17624821
Alignment:
Q  15 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||            |||||    
T  17624651 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaag 17624749  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17624750 aaaccaaacagctttagcc-ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 17624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 32206679 - 32206509
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  32206679 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaataaataaa 32206581  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| ||||| |||||| ||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  32206580 gaaatcaaacggctttaacc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 40950935 - 40951103
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  40950935 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---ataaaaaaataaa 40951031  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||| ||       ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40951032 gaaatcaaacagctttaacc--tttttcttaaagagttttattttaactttattttaaagtagcttttagaccg 40951103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 28116924 - 28116721
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact------nnnnnnnnnnnn 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||                      
T  28116924 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaaaaaa 28116825  T
Q  110 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggt 209  Q
    ||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||    
T  28116824 taaagaaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgtaaaaaagtctgatcaaacggt 28116727  T
Q  210 acctaa 215  Q
    ||||||    
T  28116726 acctaa 28116721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 34264715 - 34264550
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            ||||    
T  34264715 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---acaaaaaaataaa 34264619  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||| ||       ||||||||| |||||||||||||||| |||||||||||||||||    
T  34264618 gaaaccaaacagctttaacc--tttttcttaaagagttttattttaactttgtattaaagtagcttttaga 34264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 55188160 - 55188328
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  55188160 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 55188256  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||||||       |||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  55188257 gaaaccaaacagttttagcc--tttttcttaaagagctttattttaactttattttaaaataatttttagaccg 55188328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 10137966 - 10137883
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10137966 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6940261 - 6940178
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6940261 cagacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 11967087 - 11966923
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            ||||    
T  11967087 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact----aaaaaaaataaa 11966992  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||| |||| ||       ||||||||| ||||||||||||||||||||||||| ||||||||    
T  11966991 gaaaccaaacagttttaacc--tttttcttaaagagttttattttaactttgttttaaagtaacttttaga 11966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 36190142 - 36189974
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||            ||||    
T  36190142 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaa 36190046  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||  |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  36190045 gaaaccaaacagatttgac--atttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 36189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 8847929 - 8848097
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  8847929 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaag 8848026  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||| |||||||    
T  8848027 aaaccaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttgtagaccg 8848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 17976438 - 17976604
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||    
T  17976438 gacaccaccaaaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaag 17976533  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17976534 aaaccaaacagttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 17976604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 23628826 - 23628990
Alignment:
Q  16 gacaccaccaaa-aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  23628826 gacaccaccaaagaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaag 23628921  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||| ||||          |||||||| ||||||||||||||||||||||||||||||||||||    
T  23628922 aaaccaaacagtttta--agtttttccttaaagaactttattttaactttgttttaaagtagcttttagac 23628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 29099708 - 29099625
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  29099708 cagacaccaccaaaaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18138327 - 18138408
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  18138327 gacaccaccaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 24303884 - 24303720
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| ||||            ||||||    
T  24303884 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact----aaaaaaaataaaga 24303789  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||| |||||||||        ||||||  |||||||||||||||| |||||||||||||||||||||    
T  24303788 aaccaaatagctttagc--tttttccttaaatggctttattttaactttattttaaagtagcttttagacc 24303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 26097723 - 26097651
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  26097723 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 32200799 - 32200716
Alignment:
Q  15 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  32200799 agacaccaccaaaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 37873728 - 37873560
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||    
T  37873728 gacaccaccaaaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaag 37873631  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagcttta-ttttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||| ||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  37873630 aaaccaaacagttttagc--tttttccttaaagagctttatttttaactttgttttaaagtagcttttagacc 37873560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 11180909 - 11180981
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  11180909 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 39651736 - 39651889
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||            |||||||||||||||    
T  39651736 aaaaaaaaaaaaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataactttaactct-------aaaaataaagaaaccaaaca 39651828  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39651829 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 41144377 - 41144305
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  41144377 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 43117519 - 43117591
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||    
T  43117519 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 46045867 - 46045716
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  46045867 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 46045771  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||  |        |||||| ||||||||||||||||||||||||||||||||||||||||    
T  46045770 actttttc--------cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 46045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 28361565 - 28361410
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || ||| |||||||||||||||||||||||||||||| ||||||||| |||||||| || | ||||            |||||||||||||||    
T  28361565 aaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattcataactaaaaaaaa----taaagaaaccaaaca 28361470  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||        || |||||||||||||||||||||||||||||||||||||||||||    
T  28361469 gctttagc--tttttcctgaaagagctttattttaactttgttttaaagtagcttttagacc 28361410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 20681186 - 20681268
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  20681186 gacaccaccaaaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 187
Target Start/End: Original strand, 32139419 - 32139573
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact--nnnnnnnnnnnntaaagaaaccaaacagctttagc 132  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||              | |||||||||||||||||||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaactaaaactaaaaaaaatgaagaaaccaaacagctttagc 32139518  T
Q  133 cnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
            | |||| | ||||||||||||||||||||||||||||||||||||||    
T  32139519 ttttttttcctaaaaaactttattttaactttgttttaaagtagcttttagaccg 32139573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 49125536 - 49125618
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||| ||||    
T  49125536 gacaccaccaaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 40665513 - 40665593
Alignment:
Q  17 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  40665513 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 22556965 - 22557037
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  22556965 aaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 40849729 - 40849801
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||||    
T  40849729 aaaaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 8151202 - 8151359
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaac 123  Q
    ||||||| || |||||||||||||||||||| |||||| |||||| ||||||||| |||||||| |||| ||||            ||||||||||||||    
T  8151202 caaaaaaaaaaaaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaactaaaaaaaaa---taaagaaaccaaac 8151297  T
Q  124 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    | ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  8151298 aactttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8151359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 346679 - 346520
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||| ||||||||||||| ||||||||| | ||||||||| || |||||||||| ||||            |||||||||||||||    
T  346679 aaaaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact-aaaaaaaataataaagaaaccaaaca 346581  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||          |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  346580 gcttta--attttttccttaaagagctttatttttactttgttttaaagtagcttttaaaccg 346520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 24631181 - 24631102
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||||| |||||||  |||||||||    
T  24631181 acaccaccaaaaaataataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaatagttttaaaact 24631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 8654386 - 8654320
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  8654386 aaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataacttta 8654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 34663865 - 34663912
Alignment:
Q  19 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34663865 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 34663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 45019226 - 45019181
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 45019181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 51153499 - 51153552
Alignment:
Q  39 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 51153552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 34663936 - 34664012
Alignment:
Q  110 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  34663936 taaagaaaccaaacaactttagcctttttt-cttaaagagctttattttaactttattttaaagtagcttttagaccg 34664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 51187608 - 51187683
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 90  Q
    ||||||||||||||| || |||||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||    
T  51187608 gacaccaccaaaaaaatattaaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataactt 51187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 32200679 - 32200633
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32200679 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 32200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 45472518 - 45472468
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 66  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45472518 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaa 45472468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 52620733 - 52620779
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  52620733 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 52620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 25881932 - 25881992
Alignment:
Q  37 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||| | |||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataaatgtaaaact 25881992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 30071346 - 30071414
Alignment:
Q  29 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| || | ||||||||||||| ||||    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataact 30071414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 34664934 - 34664978
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34664934 ttaaagaactttattttaactttgttttaaagtagcttttagacc 34664978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 18138452 - 18138495
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttagac 18138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 49125663 - 49125706
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttagac 49125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 52620629 - 52620680
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaa 66  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  52620629 gacaccaccaaaaaaataataaattcagagttttgtacaatattttgccaaa 52620680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 10581946 - 10581901
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10581946 ttaaagagctttattttaattttgttttaaagtagtttttagaccg 10581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  45 ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 45019262 - 45019226
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgt 50  Q
    |||||||||||||||||||||||||||||||||||||    
T  45019262 cagacaccaccaaaaaataataaattcaaagttttgt 45019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 10262069 - 10262027
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10262069 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 10262027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 21562386 - 21562428
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  21562386 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 21562428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 24080140 - 24080098
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24080140 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 24080098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 43329907 - 43329949
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  43329907 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 43329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 9097543 - 9097470
Alignment:
Q  23 ccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||||||| ||| ||||||    
T  9097543 ccaaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaaaatagcttgaaaact 9097470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 20681304 - 20681348
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||    
T  20681304 ttaaagagctttattt-aactttattttaaagtagcttttagaccg 20681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 29346287 - 29346227
Alignment:
Q  36 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  29346287 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 29346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35832051 - 35831991
Alignment:
Q  36 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  35832051 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 35831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 44856696 - 44856741
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||    
T  44856696 ttaaagggctttattttaactttgttttaaaggagcttttaaaccg 44856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 26927010 - 26926968
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  26927010 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 26926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 180
Target Start/End: Original strand, 43117629 - 43117668
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttt 180  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  43117629 cttaaaaagctttattttaactttgtttttaagtagcttt 43117668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 51449973 - 51450015
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  51449973 aaaaaataataaatttaaagttt-gtacaatattttgccaaaca 51450015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 8654276 - 8654230
Alignment:
Q  142 ttaaagagctttattttaactttgtttt-aaagtagcttttagaccg 187  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||    
T  8654276 ttaaagggctttattttaactttgttttaaaagtaacttttagaccg 8654230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 9097433 - 9097387
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  9097433 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 9097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 24631064 - 24631018
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| | |||||||||||||||| || ||||||||||||||||||    
T  24631064 cttaaaaacctttattttaactttgattcaaagtagcttttagaccg 24631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 41106052 - 41106098
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||||||    
T  41106052 cttaaagggctttattttatctttgttttaaaggagtttttagaccg 41106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 18002543 - 18002494
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 73  Q
    ||||||| || ||| |||||||||||||||||||||| ||||||| ||||    
T  18002543 caaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttt 18002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 41105971 - 41106012
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaa 83  Q
    ||||||| ||||||||||||||||||| ||||||||| ||||    
T  41105971 aagttttatacaatattttgccaaacaacttttaacttaaaa 41106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 18002484 - 18002441
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||    
T  18002484 cttaaatagctgtattttaactt-gttttaaagtagcttttagac 18002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 26871668 - 26871609
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  26871668 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 26871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 173
Target Start/End: Original strand, 30071452 - 30071484
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaag 173  Q
    |||||||| ||||||||||||||||||||||||    
T  30071452 cttaaagatctttattttaactttgttttaaag 30071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 40952131 - 40952175
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||||    
T  40952131 cttaaaaaactttattttaactttattttaaagtagtttttagac 40952175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 970945 - 971142
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  970945 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 971042  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  971043 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 971140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 8878111 - 8878280
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  8878111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 8878208  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8878209 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8878280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 7274664 - 7274831
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||||    
T  7274664 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaaga 7274761  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7274762 aaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 36086030 - 36085861
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  36086030 cagacaccaccaaaaagtaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaataaataaa 36085933  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  36085932 gaaaccaaacagctttagcc--tttttcttaaagatctttattttaactttgttttaaagtagcttttagaccg 36085861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 1835677 - 1835844
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||    
T  1835677 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaa----aaa 1835772  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  1835773 aaaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1835844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 31972274 - 31972442
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  31972274 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 31972370  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||| ||||    
T  31972371 gaaaccaaacagctttaac--atttttcttaaagagctttattttaactttgttttaaagtagcttttaaaccg 31972442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 5166258 - 5166427
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  5166258 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 5166355  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||  ||       ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5166356 gaaaccaaacagcttttacc--tttttcttaaagagctttattttaactttgttttaaagtagctttttgaccg 5166427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 24926165 - 24926005
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  24926165 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 24926069  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    |||||||||||||||||       |||||||||||||||||||||||||||| |||||||||||||    
T  24926068 accaaacagctttagcc--tttttcttaaagagctttattttaactttgtttaaaagtagctttta 24926005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 8683652 - 8683819
Alignment:
Q  15 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||            |||||    
T  8683652 agacaccaccaaaaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaag 8683748  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  8683749 aaaccaaatagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 3324347 - 3324178
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||            ||||    
T  3324347 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 3324250  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  3324249 gaaaccaaacagctttaacctttttt--ttaaagagctttattttaactttgttttaaagtagcttttagaccg 3324178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 4631203 - 4631369
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact-nnnnnnnnnnnntaaaga 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             ||||||    
T  4631203 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaataaaataaaga 4631302  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  4631303 aaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4631369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 18166916 - 18166749
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  18166916 cagataccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 18166821  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||| ||||||||||||||        ||||||| |||||||||||||||||||||||||| |||||||||||    
T  18166820 gaaacgaaacagctttagcctttttt--ttaaagaactttattttaactttgttttaaagtaacttttagaccg 18166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 3243377 - 3243209
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  3243377 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaaaaaaataaag 3243280  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  3243279 aaaccaaacagcttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 7233015 - 7233098
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7233015 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 668375 - 668206
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||    
T  668375 gacaccaccaaaaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaactaaaaaaaaaaaataaaga 668276  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| |||||||        |||||||| ||||||||||||||||||||||||||||||||||||||    
T  668275 aaccaaacaactttagc--ttttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 17032896 - 17032728
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||            ||||    
T  17032896 cagacaccacaaaaaaaaaaaaaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact---aaaaaaaattaaa 17032800  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17032799 gaaaccaaacaactttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 3079720 - 3079876
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||| ||||            |||||||||||||||    
T  3079720 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact----aaaaaaaataaagaaaccaaaca 3079815  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    | ||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  3079816 gttttagc--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 34912654 - 34912810
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  34912654 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 34912749  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  34912750 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 34912810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 40202218 - 40202374
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  40202218 aaaaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 40202313  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  40202314 actttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 40202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 20313294 - 20313162
Alignment:
Q  51 acaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagc 150  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       ||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa--taaagaaaccaaacagctttagccttttt--cttaaagagc 20313199  T
Q  151 tttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20313198 tttattttaactttgttttaaagtaacttttagaccg 20313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 36078637 - 36078481
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||             |||||    
T  36078637 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaactaaaaaa-------aaaga 36078545  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    || ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  36078544 aatcaaacagctttagc---ttttttttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 9799405 - 9799239
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||| |||||||||| |            |||||||    
T  9799405 acaccactaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaactttaaaattaaaaacaaaaaataaagaa 9799306  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||| |||| |        || |||||||||||||||| |||||||||||||||||||||||||    
T  9799305 accaaacagttttaac--ttctttctcaaagagctttattttatctttgttttaaagtagcttttagac 9799239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 38879129 - 38879211
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  38879129 gacaccaccaaaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 10120612 - 10120770
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  10120612 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact--aaaaaattaataaagaaaccaaaca 10120709  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||          ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  10120710 gcttta--attttttccttaaagagttttattttaattttgttttaaagtagcttttagaccg 10120770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 1117981 - 1118136
Alignment:
Q  25 aaaaaataataaattcaaagttt--tgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaa 122  Q
    ||||||||||||||||||||||   |||||||||||||| |||||| ||||||||| ||||||||||||| ||||            ||||||||| |||    
T  1117981 aaaaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaactaaa 1118076  T
Q  123 cagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||    
T  1118077 cagctttagc--tttttccttaaagagttttattttaactttgttttaaagtagcttttaga 1118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 35423789 - 35423939
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| | ||||            |||||||||||||||    
T  35423789 aaaaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact----aaaataaataaagaaaccaaaca 35423884  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||  |         ||||||||||||||||||||||||||||||||||||||||||||||    
T  35423885 actttttc--------tttaaagagctttattttaactttgttttaaagtagcttttagaccg 35423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 41452818 - 41452974
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41452818 aaaaaaaaaaaaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41452913  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||| |        ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  41452914 actttaac--tttttccttaaagagttttattttaactttgttttaaagtagctttaagaccg 41452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 45474725 - 45474797
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||| ||||    
T  45474725 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 17051110 - 17051064
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17051110 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 17051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 38959687 - 38959564
Alignment:
Q  54 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 153  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||            ||||||||||||||| ||||||||       |||||||||||||    
T  38959687 atattttgtcaaacagcttttaactcaaaaataattttagaactaaaaaaaaa---taaagaaaccaaacaactttagccttttt--cttaaagagcttt 38959593  T
Q  154 attttaactttgttttaaagtagctttta 182  Q
    |||||||||||||||||||||||||||||    
T  38959592 attttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 2180011 - 2180093
Alignment:
Q  16 gacaccaccaaaaaataataaat-tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| || |||  ||||||||||||| |||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  2180011 gacaccaccaaaaaaaaaaaaaaatcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 17051221 - 17051167
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  17051221 cagacaccacaaaaaaataataaattctatgttttgtacaatattttgccaaaca 17051167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 3708454 - 3708496
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  3708454 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 3708496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 11868962 - 11868920
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  11868962 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 11868920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 35360355 - 35360313
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  35360355 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 35360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  32 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 89  Q
    |||||| ||||| |||||||||| |||||||||||||  |||||||| ||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 35287377 - 35287306
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || ||||||||||||| |||||||||||| ||||||| | ||||||| |||| || ||||||||||    
T  35287377 aaaaaaaaaaaaattcaaagttt-gtacaatatttttccaaacaacatttaacttaaaagtagctttaaaact 35287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 1692675 - 1692624
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  1692675 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 1692624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 35287269 - 35287226
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  35287269 cttaaaggcctttattttaactttgttttaaagtaacttttaga 35287226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 2180132 - 2180178
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  2180132 cttaaagagctttattttaaatttattttatagtagtttttagaccg 2180178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 13549536 - 13549490
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  13549536 cttaaagagttttattttaactttgttttaaaataatttttagaccg 13549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 32292307 - 32292345
Alignment:
Q  149 gctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  32292307 gctttattttaactttgttttaaagtaactttaagaccg 32292345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 38879249 - 38879291
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttag 183  Q
    ||| |||| ||||||||||||||| ||||||||||||||||||    
T  38879249 ctttaagaactttattttaactttattttaaagtagcttttag 38879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 45474836 - 45474870
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagta 175  Q
    |||||||||||||||||||||||| ||||||||||    
T  45474836 cttaaagagctttattttaactttattttaaagta 45474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 20642015 - 20641972
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| |||| ||||||||||| |||||||||||||||||||||    
T  20642015 cttaaatagctgtattttaactt-gttttaaagtagcttttagac 20641972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 20642073 - 20642025
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 73  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| ||||    
T  20642073 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttt 20642025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 101; Significance: 6e-50; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 7442 - 7610
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  7442 acaccaccaaaaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataataaagaa 7541  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7542 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 4592 - 4431
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||    
T  4592 acaccaccaaaaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaagaa 4497  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  4496 accaaacagctttagc--atttttcttaaagagctttattttaactttgttttaaagtagcttttaga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 17313621 - 17313456
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  17313621 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 17313525  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17313524 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17313456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 17046093 - 17045924
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  17046093 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 17045996  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  17045995 gaaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17045924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 27467702 - 27467872
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  27467702 cagacaccaccaaaaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 27467800  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  27467801 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 34805779 - 34805949
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||            ||||    
T  34805779 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact-aaaaaaaaaaataaa 34805877  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  34805878 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 34805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 7219369 - 7219537
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||            ||||    
T  7219369 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact---aaaaaaaaataaa 7219465  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7219466 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 14718857 - 14719025
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  14718857 cagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 14718953  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| ||||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  14718954 gaaaccaaatagctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 14719025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 16239251 - 16239083
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  16239251 cagacaccactataaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaa 16239155  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  16239154 gaaaccaaacagctttaacc--tttatcttaaagagctttattttaactttgttttaaagtagcttttagaccg 16239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 39685413 - 39685581
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  39685413 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 39685509  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||| |       |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  39685510 gaaaccaaacagctttagtc--tttttcttaaagagctttattttaactttattttaaaatagcttttagaccg 39685581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 41360980 - 41361148
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||            ||||    
T  41360980 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagtact---aaaaaaaaataaa 41361076  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41361077 gaaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41361148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 43818047 - 43817879
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  43818047 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaa 43817951  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||| || ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43817950 gaaaccaaacagctataacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 16845018 - 16845186
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||            ||||    
T  16845018 cagacatcagcaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact---aaaaaaaaataaa 16845114  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  16845115 gaaatcaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 16845186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 38139303 - 38139471
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  38139303 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact--aaaaataaaataaag 38139400  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||| |||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  38139401 aaaccaaacaacttta--cctttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 38139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 44603017 - 44602854
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  44603017 acaccaccaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 44602922  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| ||||||||       | |||||||||||||||||||||||||||||| ||| ||||||||||    
T  44602921 accaaacaactttagcc---ttttcgtaaagagctttattttaactttgttttaaaatagtttttagaccg 44602854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 11924757 - 11924926
Alignment:
Q  14 cagacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            |||    
T  11924757 cagacaccaccaagaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---gaaaaaaaataa 11924853  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    | ||||||||||||||||||        ||||||| | |||||||||||||||||||||||||||||||||||||    
T  11924854 aaaaaccaaacagctttagc--ttttttcttaaagggttttattttaactttgttttaaagtagcttttagaccg 11924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 44908488 - 44908649
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||||    
T  44908488 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaaga 44908584  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||     |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  44908585 aacc-----gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 44908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 169786 - 169620
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||            ||||||    
T  169786 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact----aaaagaaataaaga 169691  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||        ||||||  ||||||||||||||| ||||||||||||||||||||||    
T  169690 aaccaaacagctttagccttttttt-ttaaaggactttattttaactttattttaaagtagcttttagaccg 169620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 2184495 - 2184410
Alignment:
Q  12 cacagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  2184495 cacagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 36216659 - 36216576
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  36216659 cagacaccacaaaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 6816024 - 6816189
Alignment:
Q  17 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            ||||||    
T  6816024 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact-aaaaaaaaaaataaaga 6816122  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    || ||||||||||||| |        |||||| ||||||||||||||||||||||||||||||||||||    
T  6816123 aatcaaacagctttagtctttttt--ttaaagggctttattttaactttgttttaaagtagcttttaga 6816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 26518879 - 26518714
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            |||    
T  26518879 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa-tttagaact---aaaaaaaaataa 26518784  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||| |||||||| ||||||||       ||||||||||||||| |||||||| |||||||||||||||||||    
T  26518783 agacaccaaacaactttagcc--tttttcttaaagagctttatcttaactttattttaaagtagcttttaga 26518714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 39486108 - 39485942
Alignment:
Q  18 caccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||            |||||||    
T  39486108 caccaccaaaataataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaact--aaaaaaaaaataaagaa 39486011  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    | |||||||||||| |        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  39486010 aacaaacagctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcctttagaccg 39485942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 36059358 - 36059276
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  36059358 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 37034816 - 37034984
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  37034816 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaattaaaa--taaag 37034913  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| | |||||||        ||||||||||| |||||||||||||||||||||||  ||||||||||    
T  37034914 aaaccaaataactttagc--tttttccttaaagagctatattttaactttgttttaaagtaaattttagaccg 37034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 39997991 - 39998166
Alignment:
Q  40 caaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnn 139  Q
    |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||          
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaagaaaccaaacagctttagcc--tttt 39998086  T
Q  140 ncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatat 219  Q
     |||| |||||||||||||||||||||||||||||| |||||||||||       |||||  ||||||||||||||||||    
T  39998087 tcttatagagctttattttaactttgttttaaagtatcttttagaccgaaaaaaagtctggccaaacggtacctaaatat 39998166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 38137791 - 38137634
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  38137791 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaatt---aaaaataaataaagaaaccaaaca 38137695  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||  |       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  38137694 acttta--cctttttccttaaagagttttattttaactttgttttaaagtagcttttagaccg 38137634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 39525458 - 39525610
Alignment:
Q  29 aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctt 128  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||||||||||| ||||            ||||||||||||||| |||    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactt 39525553  T
Q  129 tagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    || |        |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39525554 taac--ttttttcttatagagctttattttaactttgttttaaagtagcttttagaccg 39525610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 45139122 - 45138971
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || ||| ||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||            |||||||||||||||    
T  45139122 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaaca 45139027  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  45139026 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 1877659 - 1877578
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||| ||| ||||    
T  1877659 gacagcacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 2190728 - 2190647
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| |||| ||||    
T  2190728 acaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 11579194 - 11579350
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  11579194 aaaaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 11579289  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |         ||||| || |||||||||||||||||||||||||||||||||||||    
T  11579290 gctttaac--tttttctttaaaaaggtttattttaactttgttttaaagtagcttttagaccg 11579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 41526324 - 41526467
Alignment:
Q  38 ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnn 137  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||            ||||||||||||||| ||||||          
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaacaactttag--tttt 41526417  T
Q  138 nnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
       ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41526418 tttcttaaagagctttattttaactttgttttaaagtagcttctagaccg 41526467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 34997523 - 34997596
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 89  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||||||||| ||||||||| ||||||||||    
T  34997523 gacaccacaaaaaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataact 34997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 38909288 - 38909360
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || ||||||||| ||||||||||||| ||||    
T  38909288 aaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 42844281 - 42844352
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  42844281 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 35 - 185
Target Start/End: Complemental strand, 12261532 - 12261387
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagc-ttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagcc 133  Q
    ||||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||            ||||||||||||||||||||| |     
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaact----aaaaaaaataaagaaaccaaacagctttaac- 12261438  T
Q  134 nnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
           |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  12261437 -tttttccttaaagaactttattttaactttattttaaagtagtttttagac 12261387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 44655059 - 44655224
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||| |||||||||| |||||||||||||||| || ||||||||||||| ||||| ||| ||||||||  ||| | ||            ||||||    
T  44655059 gacaccacaaaaaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataaagttagagct----aaaaaaaataaaga 44655154  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    || ||||||||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  44655155 aatcaaacagctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 44655224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 27914929 - 27914984
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27914984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 27961348 - 27961403
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactttaaaact 27961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 42844411 - 42844457
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 42844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 1922389 - 1922457
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||| | ||||||| ||||||||    
T  1922389 caaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaatttaaaaatagctttaaaa 1922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 15310398 - 15310470
Alignment:
Q  26 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 97  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15310398 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 15490767 - 15490839
Alignment:
Q  26 aaaaataataaattcaaagttttgtacaatattttgccaaac-agcttttaactcaaaaataactttaaaact 97  Q
    |||||||| |||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||||    
T  15490767 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 27748853 - 27748908
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  27748853 aagttttgcataatattttgccaaacaacttttaacttaaaaataactttaaaact 27748908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 27877985 - 27878040
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 27878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 28018166 - 28018221
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||| |||||| ||||||||| |||| |||||||||||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactttaaaact 28018221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 14449570 - 14449524
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttagaccg 14449524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 24511638 - 24511684
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  24511638 cttaaagatctttattttaactttgttttaaagtagcttttaaaccg 24511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 39201524 - 39201593
Alignment:
Q  27 aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||  |||||||||    
T  39201524 aaaataataaattcaaa-ttttgtacaatattttgccaaacaacatttaactttaaaatagttttaaaact 39201593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 39140760 - 39140716
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  39140760 cttaaagaactttattttaactttgttttaaagtaacttttagac 39140716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 42984098 - 42984142
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  42984098 cttaaagagctttatttcaactttgttttaaagtagtttttagac 42984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  37 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaa 84  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 20665663 - 20665621
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  20665663 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 20665621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 180
Target Start/End: Complemental strand, 33848669 - 33848630
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttt 180  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  33848669 cttaaggagctttattttaactttgttttaaagtagcttt 33848630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 41904778 - 41904829
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  41904778 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 41904829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 45296836 - 45296785
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  45296836 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 45296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 33848772 - 33848722
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 66  Q
    |||||||| | |||| || ||||||||||||||||||||||||||||||||    
T  33848772 gacaccacaacaaaaaaaaaaattcaaagttttgtacaatattttgccaaa 33848722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 35916641 - 35916579
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaa 76  Q
    |||||||||| |||||| || |||| |||  |||||||||||||||||||||||| |||||||    
T  35916641 cagacaccacaaaaaaaaaaaaaatccaatattttgtacaatattttgccaaacaacttttaa 35916579  T

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Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 40048637 - 40048591
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||    
T  40048637 cttaaagaactttattttaactttattttaaaatagcttttagaccg 40048591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 35916526 - 35916481
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||    
T  35916526 cttaaagagctttattttaactttgttttaaagcagttttcagacc 35916481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 36059237 - 36059192
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||||    
T  36059237 ttaaagaactttatttgaactttgttttaaagtagcttttataccg 36059192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 36216537 - 36216492
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  36216537 ttaaagaactttattttaatttttttttaaagtagcttttagaccg 36216492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 1921795 - 1921835
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaa 65  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  1921795 aaaaaataataaattcaaagttgtgtataatattttgccaa 1921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 2184369 - 2184329
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttt 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  2184369 cttaatgagctttattttaactttattttaaagtagctttt 2184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 2190598 - 2190558
Alignment:
Q  147 gagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  2190598 gagctttattttaactttattttaaagtagcttttggaccg 2190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  41 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||  ||||| ||||||||  ||||||||||||| ||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 22947687 - 22947644
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  22947687 cttaaaggcctttattttaactttgttttaaagtaacttttaga 22947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 30551026 - 30550984
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  30551026 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 30550984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 35004369 - 35004412
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttaga 35004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 44215775 - 44215733
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  44215775 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 44215733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 1877540 - 1877502
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttt 180  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1877540 ttaaagagctttattttatctttattttaaagtagcttt 1877502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 34325869 - 34325927
Alignment:
Q  30 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 88  Q
    |||||||||| ||| |||| |||||||||||| |||||| ||||||||| || ||||||    
T  34325869 ataataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataac 34325927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 39140852 - 39140798
Alignment:
Q  43 agttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||| ||||| ||||||||| |||| ||  |||||||||    
T  39140852 agttttgtacaatattttgctaaacaacttttaacttaaaattagttttaaaact 39140798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 40048739 - 40048681
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaa-cagcttttaactcaaaaataacttta 92  Q
    ||||||||||||||| |||||||| ||| ||| || ||||||||| |||||||||||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataacttta 40048681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 45296748 - 45296702
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  45296748 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 45296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 29868604 - 29868649
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| | |||||||||||||| ||||||||||||| ||||||||    
T  29868604 ttaaagggttttattttaactttattttaaagtagctattagaccg 29868649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 41903183 - 41903138
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataa 87  Q
    ||||||| |||||||||||||||||||  |||||||| ||||||||    
T  41903183 aagttttatacaatattttgccaaacaaattttaacttaaaaataa 41903138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 12251539 - 12251480
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  12251539 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 12251480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 39201639 - 39201675
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  39201639 ctttattttaactttgttttgaagtaacttttagacc 39201675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 39443669 - 39443728
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  39443669 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 39443728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 54510470 - 54510302
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||    
T  54510470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaa---aaa 54510374  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54510373 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 54741795 - 54741966
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  54741795 cagacaccaccaaaaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaataaa 54741894  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  54741895 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 30269167 - 30268998
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  30269167 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 30269070  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  30269069 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 45599350 - 45599181
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  45599350 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 45599253  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  45599252 gaaaccaaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 45599181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 29500325 - 29500493
Alignment:
Q  15 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||    
T  29500325 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaag 29500422  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  29500423 aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 29500493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 22347163 - 22346994
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaata-ttttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||            |||    
T  22347163 cagacaccaccaaaaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataa 22347067  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  22347066 agaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 22346994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 4018908 - 4019077
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  4018908 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 4019005  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  4019006 gaaatcaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4019077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 7040873 - 7041041
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||            ||||    
T  7040873 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact---aaaaaaaaataaa 7040969  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7040970 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 36592299 - 36592131
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||            ||||    
T  36592299 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaa 36592203  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  36592202 gaaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 36592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 14587470 - 14587301
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||            ||||    
T  14587470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact--aaaaaaaaaataaa 14587373  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||| ||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  14587372 gaaatcaaatagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 14587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 48545101 - 48545270
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  48545101 cagacaccaccaaaaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 48545198  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  48545199 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaattttgttttaaagtagcttttagaccg 48545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 52674775 - 52674942
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||            ||||    
T  52674775 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacag-ttttaactcaaaaataactttagtact---acaaaaaaataaa 52674870  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  52674871 gaaaccaaacagctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 53022669 - 53022826
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||            |||||||||||||||    
T  53022669 aaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 53022765  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  53022766 gctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53022826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33932569 - 33932402
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  33932569 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 33932474  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||| |       |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  33932473 gaaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttagagtagtttttagaccg 33932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 52461019 - 52461188
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  52461019 cagacaccacgaaaaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 52461116  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| ||||||| ||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  52461117 gaaatcaaacagttttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 2909424 - 2909592
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| || |            ||||    
T  2909424 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaatt--aaaaaacaaataaa 2909521  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||||| ||       ||| |||||||||||||||||||||||||||||||||||||||||    
T  2909522 gaaaccaaacagctttaacc-tttttccttgaagagctttattttaactttgttttaaagtagcttttagac 2909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 7265047 - 7265215
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||            ||||    
T  7265047 cagacaccacaaaaaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact---aaaaaaaaataaa 7265143  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  7265144 gaaaccaaacaactttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7265215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 29450651 - 29450817
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |            ||||    
T  29450651 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaatt--aaaaaaaaaataaa 29450748  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||||    
T  29450749 gaaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 26881613 - 26881780
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||            ||||    
T  26881613 cagacaccacaaaaaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact----aaaaaaaataaa 26881708  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  26881709 taaaccaaacaactttaac--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 26881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 39721252 - 39721418
Alignment:
Q  16 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  39721252 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact----aaaaaaaataaag 39721347  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||         |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39721348 aaaccaaacagctttag--ttttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 19536699 - 19536866
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||            ||||    
T  19536699 cagacaccagcaaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact----aaaaaaaataaa 19536794  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||||||       |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  19536795 gaaatcaaacagctttagcc--tttttcttaaagaactttattttaactttgttttaaattagcttttagaccg 19536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 50739157 - 50739313
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50739157 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50739252  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50739253 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50739313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 50773698 - 50773542
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  50773698 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 50773603  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50773602 gctttagc--ttttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50773542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13450264 - 13450347
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  13450264 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 46757551 - 46757720
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  46757551 cagacaccaccaaaaaataataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact-gaaaaaaaaaataaa 46757648  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||| |||||||||||| |       |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  46757649 aaaactaaacagctttagtc--tttttcttaaaaagctttattttaactttgttttaaagtagcttttaaaccg 46757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 20849484 - 20849404
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  20849484 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 43316598 - 43316516
Alignment:
Q  15 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  43316598 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 12101545 - 12101464
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  12101545 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 48961122 - 48961276
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||| ||              |||||||| ||||||    
T  48961122 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa------aaaaataataaagaaatcaaaca 48961215  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  48961216 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 48961276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 42187833 - 42187665
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||    
T  42187833 cagacaccaccaaaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataa 42187738  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||        |||||| ||||||||| |||||||||||||||||||||||| ||||    
T  42187737 agaaaccaaacagctttagcctttttt--ttaaagggctttatttaaactttgttttaaagtagcttttaaaccg 42187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 46090190 - 46090118
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46090190 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 187
Target Start/End: Complemental strand, 15496541 - 15496385
Alignment:
Q  26 aaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacag 125  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||| || || ||||||||||||| ||||            ||||||||||||||||    
T  15496541 aaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacag 15496445  T
Q  126 ctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||         |||||||||||||||||||||||||||||||||||||||||||||||    
T  15496444 ctttag--tttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 15496385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 36987810 - 36987654
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  36987810 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 36987715  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36987714 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 36987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 37013249 - 37013093
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| || |            |||||||||||||||    
T  37013249 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaaccaaaca 37013154  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37013153 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37013093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 37413560 - 37413724
Alignment:
Q  14 cagacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||            ||     
T  37413560 cagacaccaccaagaaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataact---aaaagaaaatat 37413656  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    ||||||||||||||||||||        |||||||  |||||||||||||||||||||||||||||||||    
T  37413657 agaaaccaaacagctttagc--ttttttcttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 38361743 - 38361910
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||            |||||    
T  38361743 gacaccaccaaaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaactaaaaaaaa----taaag 38361838  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| ||       || ||  |  |||||||||||||||||||||||||||||||||||||    
T  38361839 aaaccaaacagcttta-cctttttccctaaagaaattttattttaactttgttttaaagtagcttttagaccg 38361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 47719487 - 47719641
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||| || |            |||||||| |||| |    
T  47719487 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaatt----aaaaaaaataaagaaatcaaata 47719582  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| |        |||||||||||||||||||||||||||||||||||||||||||||    
T  47719583 gctttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagac 47719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 35690293 - 35690212
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  35690293 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 41990836 - 41990680
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  41990836 aaaaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact----agaaaaaataaagaaaccaaaca 41990741  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||||| |        |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  41990740 actttaac--ttttttcttatagaactttattttaactttgttttaaagtagcttttagaccg 41990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 46850783 - 46850711
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  46850783 aaaaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 46850711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13337091 - 13337173
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||||||||| ||||    
T  13337091 cagacaccacaaaaaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 44762795 - 44762728
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44762795 aaaatataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataacttta 44762728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 54203828 - 54203667
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||| | ||||||||||||| ||||            |||||    
T  54203828 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact--aaaaaaaaaataaag 54203731  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||| || |||  |        ||||||||||||||||||||||||||||||||||||||||||||||    
T  54203730 aaaccaaaaagttttttc--------cttaaagagctttattttaactttgttttaaagtagcttttagacc 54203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 54113415 - 54113487
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  54113415 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataact 54113487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 50933196 - 50933279
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||| || ||||||||||||||| ||| |||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  50933196 cagacacaacaaaaaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 12996893 - 12996818
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt 91  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||    
T  12996893 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataacttt 12996818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 875880 - 875926
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  875880 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 875825 - 875884
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaa 76  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||    
T  875825 cagacaccaccaaaaaata---aattcaaagttttgtacaatattttgccaaacagctcttaa 875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 33899842 - 33899986
Alignment:
Q  37 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnn 136  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||| ||||||        
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataact----aaaaaaaataaagaaaccaaacagttttagc--tt 33899935  T
Q  137 nnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
        |||||| | |||||||||||||||||||||||||| |||||||||||    
T  33899936 ttttcttaaaaaactttattttaactttgttttaaagtaacttttagaccg 33899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 12101423 - 12101377
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12101423 cttaaagggctttattttaactttgttttaaagtagcttttagaccg 12101377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 35906766 - 35906684
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||| || ||||||| | |||||||| |||| ||||    
T  35906766 gacaccaccaaaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 35529818 - 35529773
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  35529818 ttaaagggctttattttaactttgttttaaagtagcttttagaccg 35529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 10617639 - 10617695
Alignment:
Q  41 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaatagttttaaaact 10617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 20996406 - 20996334
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || ||||||||| ||||||||||||||||| |||||| ||||||| | ||||||||||||| ||||    
T  20996406 aaaaaaaaaaaaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 54835729 - 54835801
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || ||| ||||| |||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  54835729 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataggtttaaaact 54835801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 8238921 - 8238972
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  8238921 tttgtacaatattttgccaaacaacatttaacttaaaaataactttaaaact 8238972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||||||| ||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 54195754 - 54195692
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataa 87  Q
    ||||||||||||||||||| ||||||||||||||||| |||| |  |||||||| ||||||||    
T  54195754 aaaaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataa 54195692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 46850674 - 46850630
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||    
T  46850674 cttaaagacctttattttaactttgttttaaaatagcttttagac 46850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 13450390 - 13450432
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  13450390 cttaaagagcttt-ttttaactttgttttaaagtagcttttaga 13450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 44075456 - 44075414
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  44075456 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 44075414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 54113531 - 54113603
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||       ||||| |||||||||||||    
T  54113531 cttaaaggactttattttaactttgttttaaagtagtttttagaccgaaaaaaagtctggtcaaacggtacct 54113603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 34433501 - 34433455
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||    
T  34433501 cttaaaggactttatttaaactttgttttaaagtagcttttagaccg 34433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 35690164 - 35690122
Alignment:
Q  145 aagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagaccg 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 44541231 - 44541277
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||    
T  44541231 cttaaagaactttattttaactttgttttaaaagagcttttagaccg 44541277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 46090078 - 46090037
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  46090078 cttaaagcgctttgttttaactttgttttaaagtagctttta 46090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 54796000 - 54795955
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||    
T  54796000 cttaaagacctttattttaactttgttttgaagtaacttttagacc 54795955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 175
Target Start/End: Original strand, 10617736 - 10617768
Alignment:
Q  143 taaagagctttattttaactttgttttaaagta 175  Q
    |||||||||||||||||||||||||||||||||    
T  10617736 taaagagctttattttaactttgttttaaagta 10617768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 34433803 - 34433767
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttg 61  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34433803 aaaaaataataaattaaaagttttgtacaatattttg 34433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 22762347 - 22762296
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  22762347 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 22762296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 42617826 - 42617767
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttt 73  Q
    ||||| ||| |||||||||||||||| ||| ||||||||||||||||  |||||| ||||    
T  42617826 cagacgccatcaaaaaataataaatttaaatttttgtacaatattttatcaaacaacttt 42617767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 151 - 186
Target Start/End: Original strand, 50933332 - 50933367
Alignment:
Q  151 tttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||||||||||| |||||||||||||||    
T  50933332 tttattttaactttgttttagagtagcttttagacc 50933367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 54796088 - 54796037
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | |||| || ||||||| ||||||||||    
T  54796088 tttgtacaatattttgccaaacaacatttaccttaaaaatatctttaaaact 54796037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 916278 - 916315
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgcc 63  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  916278 aaaaaataataaattcaaag-tttgtacaatattttgcc 916315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 32754259 - 32754305
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  32754259 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 32754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 44541140 - 44541194
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaac 96  Q
    |||||||| |||||||||||||||||| |||| |||   ||||||||||||||||    
T  44541140 aagttttggacaatattttgccaaacaactttcaacctcaaaataactttaaaac 44541194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 46088672 - 46088609
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||| ||||||||||||||||| ||||       ||||| |||||||||||||    
T  46088672 ctttattttaactttattttaaagtagcttttacaccgaaaataagtctggtcaaacggtacct 46088609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 52464928 - 52464882
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  52464928 cttaaaggtctttattttaactttgttttcaagtaacttttagaccg 52464882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 20849354 - 20849317
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  20849354 ctttattttaacttttttttaaagtaacttttagaccg 20849317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 47670486 - 47670453
Alignment:
Q  151 tttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||||||| |||||||||||    
T  47670486 tttattttaactttgttttaaaatagcttttaga 47670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 12996772 - 12996731
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||||||  ||||||||| |||||||||||    
T  12996772 cttaaagagctttattttaac--tgttttaaaatagcttttaga 12996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 20996295 - 20996251
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||    
T  20996295 ttaaagtgctttattttaactttattttaaagtaatttttagacc 20996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 32754151 - 32754222
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || ||||||||||||| ||||||||||||| ||||||   ||||||| |||| || ||||||||||    
T  32754151 aaaaaaaaaaaaattcaaagttt-gtacaatattttgtcaaacaatatttaacttaaaagtagctttaaaact 32754222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 99; Significance: 9e-49; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 25699 - 25869
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  25699 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 25797  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  25798 gaaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 25869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 7833537 - 7833705
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||            ||||    
T  7833537 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact---aaaaaaaaataaa 7833633  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7833634 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7833705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 17585507 - 17585675
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  17585507 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 17585603  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  17585604 gaaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 17585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 43120862 - 43120693
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||             ||||    
T  43120862 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac--aaaaaaaaaaataaa 43120765  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43120764 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 9574853 - 9575021
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||            ||||    
T  9574853 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 9574949  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  9574950 gaaaccaaacaactttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 9575021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 25659893 - 25659724
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  25659893 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaataaaataaa 25659796  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  25659795 taaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 25659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33373903 - 33373735
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  33373903 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 33373807  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33373806 gaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 33373735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33895300 - 33895131
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  33895300 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 33895203  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||  |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33895202 gaaaccaaacagctttaatc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 38802300 - 38802464
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  38802300 acaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 38802396  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  38802397 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 38802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 39327126 - 39326959
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  39327126 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 39327031  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| ||||||||       |||||||||||||||||||||||| ||||||||||||||||||||||    
T  39327030 gaaaccaaacaactttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttagaccg 39326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 41901783 - 41901614
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  41901783 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 41901686  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||||    
T  41901685 gaaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41901614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 216
Target Start/End: Complemental strand, 46588174 - 46587978
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  46588174 cagacaccaccaaaaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 46588079  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||       ||||| |||||||||||||    
T  46588078 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttagagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 46587981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 3265108 - 3265276
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  3265108 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 3265204  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  3265205 gaaaccaaacagctttagcc--tttttcttaaagaactttattttaactttgttttagagtagcttttagaccg 3265276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 11583148 - 11583314
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  11583148 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 11583243  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||       |||||||||||||||||||| ||||||||||||||||||||||||||    
T  11583244 gaaaccaaacagctttggcc--tttttcttaaagagctttattttaa-tttgttttaaagtagcttttagaccg 11583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 33642602 - 33642770
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  33642602 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 33642699  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  33642700 -aaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 40432286 - 40432113
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta--aaactnnnnnnnnnnnnta 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | |            ||    
T  40432286 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttattagaattaaaaaaaaaaata 40432187  T
Q  112 aagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40432186 aagaaaccaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 11754308 - 11754146
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||| |    
T  11754308 acaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagta 11754212  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  11754211 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttaga 11754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 45104172 - 45104337
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  45104172 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 45104268  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||| ||||| ||       |||||||||||||||||||||||||||| |||||||||||||||    
T  45104269 gaaaccaaacaactttaacc--tttttcttaaagagctttattttaactttgtttaaaagtagcttttaga 45104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 14487407 - 14487239
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||            ||||    
T  14487407 cagataccaccaaaaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 14487311  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||||||||||||||       |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  14487310 aaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttattttaaagtagcttttaaaccg 14487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33894170 - 33894008
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  33894170 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaattaaa 33894073  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33894072 gaaaccaaacagcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33894008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 47037214 - 47037045
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  47037214 cagacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 47037116  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||| ||       |||||| ||||||||||||||||||||||||||||||||||||||||    
T  47037115 gaaatcaaacagctttaacc--tttttcttaaa-agctttattttaactttgttttaaagtagcttttagaccg 47037045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 36165604 - 36165435
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||            ||||    
T  36165604 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 36165506  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||| ||||||||       |||||| ||||||||||||||||| ||||||| |||||||||||||    
T  36165505 gaaaccaaacaactttagcc--tttttcttaaaaagctttattttaactttattttaaaatagcttttagacc 36165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33832008 - 33831845
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||             |||    
T  33832008 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaatta-aaa 33831910  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||           |||||||||||||||||||||||||||||||||||| ||||||||||    
T  33831909 gaaaccaaacagcttt---------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33831845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33818177 - 33818010
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  33818177 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 33818082  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||| |||||| |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33818081 aaaatcaaacaactttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33818010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 33877645 - 33877478
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||            ||||    
T  33877645 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 33877550  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     ||| |||||| |||||| |       |||||||||||||||||||||||||||||||| ||||||||||||||    
T  33877549 aaaatcaaacaactttagtc--tttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 17249026 - 17249195
Alignment:
Q  14 cagacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||            |||    
T  17249026 cagacaccaccaaaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact---gaaaaaaaataa 17249122  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17249123 agaaaccaaacagctttagcc--tttttcttaaagggctttattttaactttgttttaaagtagcttttacaccg 17249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 182
Target Start/End: Original strand, 43123042 - 43123193
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43123042 aaaaaataa-aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact----aaaaaaaataaagaaaccaaaca 43123136  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    ||||| |||        |||||| ||||||||||||||||||||||||||||||||||    
T  43123137 gcttttgccttttttt-ttaaagggctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 46040568 - 46040486
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  46040568 gacaccaccaaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 43119186 - 43119032
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  43119186 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaattaaagaaaccaaaca 43119090  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    | |||| |        ||||||||| |||||||||| |||||||||||||||||||||||    
T  43119089 gttttaac--ttttttcttaaagagttttattttaattttgttttaaagtagcttttaga 43119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 24473623 - 24473551
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  24473623 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 36952797 - 36952718
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  36952797 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattta 36952718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 16097336 - 16097502
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||| |||||| ||  | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||            ||||    
T  16097336 cagacaccacaaaaaaaaaa--acttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact-aaaaaaaaaaataaa 16097432  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||| ||||       |||||||  ||||||||||||||||||||||||||||||||||||    
T  16097433 gaaaccaaacagcttcagcc--tttatcttaaaggactttattttaactttgttttaaagtagcttttagac 16097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 31638496 - 31638331
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||||| ||||||||  ||| | ||            ||||||    
T  31638496 gacaccacaaaaaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataaagttagagct----aaaaaaaataaaga 31638401  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31638400 aaccaaacagctttagc--tttttccttaaagagctttattttatctttgttttaaagtagctttaagaccg 31638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 39879224 - 39879140
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||    
T  39879224 cagacaccaccaaaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 31215907 - 31215782
Alignment:
Q  54 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 153  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31215813  T
Q  154 attttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||||||||||||||||    
T  31215812 attttaactttgttttaaagtagcttttaga 31215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 31221662 - 31221537
Alignment:
Q  54 atattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnncttaaagagcttt 153  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||            ||||||||||||||||||||||||       |||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaa---taaagaaaccaaacagctttagcctttgt--cttaaagagcttt 31221568  T
Q  154 attttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||||||||||||||||    
T  31221567 attttaactttgttttaaagtagcttttaga 31221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 18091268 - 18091348
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  18091268 gacaccataaaaaaataataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaatagctttaaaact 18091348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 1322609 - 1322525
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||||| ||||    
T  1322609 cagacaccaccaaaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 23730376 - 23730210
Alignment:
Q  16 gacaccaccaaaaaat-aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttt-aaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||||            ||||    
T  23730376 gacaccaccaaaaaagcaataatttcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttcaaaact---aaaaaacaataaa 23730281  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| |||||||        ||||||||||||||||||||||||| |||||||||||||||||||||    
T  23730280 gaaaccaaacaactttagc--ttattccttaaagagctttattttaactttg-tttaaagtagcttttagaccg 23730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 185
Target Start/End: Complemental strand, 17366411 - 17366271
Alignment:
Q  39 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 138  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| || |            ||||||||||||||| |||||  |         
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacaacttta--cttttt 17366318  T
Q  139 nncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
      |||||||||||||||||||||||||||||||||||||||||||||    
T  17366317 tccttaaagagctttattttaactttgttttaaagtagcttttagac 17366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 34652277 - 34652341
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 89  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  34652277 aaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 34078285 - 34078352
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||| || |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  34078285 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataacttta 34078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 11606534 - 11606467
Alignment:
Q  30 ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||| | | ||||| ||||||||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaatagctttaaaact 11606467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 39729262 - 39729120
Alignment:
Q  39 tcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnn 138  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| || |            ||||||||||||||||||||| |          
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaattaaaaaaaa----taaagaaaccaaacagctttaactttttc 39729167  T
Q  139 nncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
       ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39729166 t--ttaaagagctttattttaattttgttttaaagtagcttttagaccg 39729120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 184
Target Start/End: Original strand, 33933029 - 33933072
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 36952673 - 36952630
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  36952673 ttaaagaactttattttaactttgttttaaagtagcttttagac 36952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 7308404 - 7308331
Alignment:
Q  25 aaaaaataataaattcaaag-ttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || |||||||||  |||||||||||||||||||||||| ||||||||| ||||||||| ||| ||||    
T  7308404 aaaaaaaaaaaaattcaaaaattttgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 44819865 - 44819821
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  44819865 cttaaatacctttattttaactttgttttaaagtagcttttagac 44819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 45589729 - 45589773
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  45589729 cttaaagggctttattttaactttgttttaaagtaacttttagac 45589773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 28568805 - 28568754
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  28568805 tttgtacaatattttgccaaacaacatttaacttaaaaatatctttaaaact 28568754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 33932911 - 33932985
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    ||||||| |||||| || ||||| |||||||||||  ||||||||||||||| ||||||| | |||||||||||||    
T  33932911 acaccacaaaaaaaaaaaaaatt-aaagttttgtatgatattttgccaaacaacttttaatttaaaaataacttta 33932985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 34652388 - 34652431
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  34652388 ttaaagaactttattttaactttgttttaaagtagtttttagac 34652431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 43124356 - 43124419
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataac 88  Q
    ||||||||| ||||||||| |||| || ||||||||||||||||  |||||||| |||||||||    
T  43124356 aaaaaataaaaaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataac 43124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 46040448 - 46040405
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  46040448 cttaaagggctttattttaactttgttttaaaatagcttttaga 46040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 16033054 - 16033008
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  16033054 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 16033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 39879102 - 39879056
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||    
T  39879102 cttaaagagttttattttaactttgttttaaagtaatttttagaccg 39879056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 95
Target Start/End: Original strand, 17670009 - 17670058
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||||||||||||| | ||||||| |||| |||||||||||    
T  17670009 tttgtacaatattttgccaaacaacatttaacttaaaagtaactttaaaa 17670058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 40648535 - 40648494
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    ||||||||||||||||| ||||||||||||||| ||||||||    
T  40648535 cttaaagagctttatttgaactttgttttaaaggagctttta 40648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 44065502 - 44065442
Alignment:
Q  37 attcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||| | || |||||||    
T  44065502 attcaaagctttgtacaatattgtgccaaacaacttttaacttaaaaaaagctgtaaaact 44065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 49223163 - 49223222
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||| |||||| | ||||||| ||||||| ||||||||    
T  49223163 aaattcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaaatagctttaaaa 49223222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 49571314 - 49571357
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  49571314 cttaaagagctttattttaact---ttttaaagtagcttttagaccg 49571357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 12247728 - 12247685
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  12247728 cttaaaggcctttattttaactttgttttaaagtaacttttaga 12247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 23910965 - 23910914
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||| | ||||||| ||||||| ||||||||||    
T  23910965 tttgtacaatattttgccacacaacatttaacttaaaaatagctttaaaact 23910914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 34078401 - 34078440
Alignment:
Q  148 agctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  34078401 agctttattttaacttcattttaaagtagcttttagaccg 34078440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 28568717 - 28568671
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  28568717 cttaaaggcctttattttaactttgttttgaagtaacttttagaccg 28568671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 36680039 - 36680085
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  36680039 cttaaagacctttattttaactttgttttgaattaacttttagaccg 36680085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 43808845 - 43808879
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagta 175  Q
    ||||||||| |||||||||||||||||||||||||    
T  43808845 cttaaagagttttattttaactttgttttaaagta 43808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 17670106 - 17670143
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  17670106 ctttattttaactttgttttgaagtaacttttagaccg 17670143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 18091391 - 18091436
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    |||||||  |||||||||||||||||||| || |||||||||||||    
T  18091391 cttaaaggcctttattttaactttgttttgaactagcttttagacc 18091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 5542119 - 5542163
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||| ||| |||||||||||||||||||| ||||| |||||||||    
T  5542119 cttagagacctttattttaactttgttttgaagtaacttttagac 5542163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 49223271 - 49223307
Alignment:
Q  151 tttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  49223271 tttattttaactttgttttgaagtaacttttagaccg 49223307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 1465 - 1632
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  1465 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 1561  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  1562 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 6e-47; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 27031312 - 27031149
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  27031312 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact-aaaaaaaaaaataaa 27031214  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttt 180  Q
    ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  27031213 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 29448800 - 29448631
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  29448800 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--aaaaaaaaaataaa 29448703  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||||||||||||||||    
T  29448702 gaaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 29448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 38045647 - 38045815
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  38045647 cagacaccaccaaaaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 38045743  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38045744 gaaaccaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 38045815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 40239980 - 40239811
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  40239980 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact--acaaaaaaaataaa 40239883  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| |||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  40239882 gaaaccaaacagttttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 216
Target Start/End: Original strand, 40789169 - 40789366
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  40789169 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataact---aaaaaaaaataaa 40789265  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
    ||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||| ||||||||||||       ||||| |||||||||||||    
T  40789266 gaaaccaaacagctttaacc--tttttcttaaagaactttattttaactttgttttaaagttgcttttagaccgaaaaaaagtctggtcaaacggtacct 40789363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 12907906 - 12908069
Alignment:
Q  19 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaac 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||||    
T  12907906 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaaac 12908002  T
Q  119 caaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  12908003 caaacagctttggcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 12908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 18956381 - 18956216
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  18956381 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact----aaaaaaaataaa 18956286  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||||||||||||||| |       |||||||||||||||||||||||||||||||||||||||||||||    
T  18956285 gaaaccaaacagctttagtc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagac 18956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 10999102 - 10999271
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||    
T  10999102 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaata--aaa 10999199  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||| |||       ||||||||| |||||||||||||||||||||||||||||||||||||    
T  10999200 gaaaccaaacagctttggcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 10999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 32960879 - 32960712
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  32960879 cagacactatcaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaa 32960783  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    ||||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32960782 gaaaccaaacagctttagcc--tttttcttaaagagttttattttaactttgttttaaagtagcttttagacc 32960712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 37669349 - 37669184
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |            ||||||     
T  37669349 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaatt---aaaaaaaaataaagat 37669253  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37669252 accaaacagctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37669184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 43156185 - 43156349
Alignment:
Q  17 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaa 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            |||||||    
T  43156185 acaccaccaaaaaataataa-ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---aaaaaaaaataaagaa 43156280  T
Q  117 accaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  43156281 accaaacagctttaacc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43156349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 17278144 - 17278340
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||             |||    
T  17278144 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaa-aaa 17278242  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacct 213  Q
     ||| ||||||||||| |||       ||||||||||||||||| |||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  17278243 aaaatcaaacagctttggcc--tttttcttaaagagctttatttcaactttgttttaaagtagcttttagaccgaaaaaaagtctggtcaaacggtacct 17278340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 41426953 - 41427120
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||            ||||    
T  41426953 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact---acaaaaaaataaa 41427049  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||| |        ||||||||  |||||||||||||||||||||||||||||||||||||    
T  41427050 gaaaccaaacagctttaac--ttttttcttaaaga-atttattttaactttgttttaaagtagcttttagaccg 41427120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 23639498 - 23639333
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |             |||    
T  23639498 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaaaa---aaa 23639402  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||| |||||    
T  23639401 gaaaccaaacaactttagcc--tttttcttaaagaactttattttaactttgttttaaagtagctcttaga 23639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 1448090 - 1448258
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||            ||||    
T  1448090 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact---aaaaaaaaataaa 1448186  T
Q  114 gaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||| |||||       || |||||| |||||||||||||||||||||| ||||||||| ||||    
T  1448187 gaaaccaaacagctctagcc--tttttctgaaagagatttattttaactttgttttaaaatagcttttaaaccg 1448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 92
Target Start/End: Original strand, 45620639 - 45620717
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45620639 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataacttta 45620717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 4408119 - 4407957
Alignment:
Q  14 cagacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||             ||    
T  4408119 cagacaccaccaaaaagataataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactttaaaactaaaaa--------aa 4408029  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    | ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  4408028 ataaaccaaacagctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 4407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 4400149 - 4399981
Alignment:
Q  14 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||            |||    
T  4400149 cagacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact----gaaaaaaataa 4400054  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||| ||||| |        ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4400053 agaaaccaaacaactttaac--ttttttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 4399981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 41343392 - 41343235
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||            ||||||||| |||||    
T  41343392 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact---aaaacaaaataaagaaacaaaaca 41343296  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
     |||||||        |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41343295 actttagc--tttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 41343235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 187
Target Start/End: Complemental strand, 4406709 - 4406541
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaag 114  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||  ||||            |||||    
T  4406709 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaact--aaaaaaaaaataaag 4406612  T
Q  115 aaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||| |||||| ||||| |        |||||||||||||||||||||||||||||||||||||||||||||||    
T  4406611 aaaacaaacaactttaac--tttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 4406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 20482280 - 20482352
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||    
T  20482280 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 4615384 - 4615454
Alignment:
Q  17 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaata 86  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4615384 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 44651955 - 44651882
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||    
T  44651955 caaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 47840722 - 47840803
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||||    
T  47840722 gacaccataaaaaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 6607088 - 6607169
Alignment:
Q  17 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| |||| ||||    
T  6607088 acaccaccaaaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 21134436 - 21134356
Alignment:
Q  16 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| |||||||| || |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  21134436 gacaccgccaaaaaaaaaaaaat-caaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 40036083 - 40035944
Alignment:
Q  41 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaacagctttagccnnnnnnn 140  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||            |||||||| ||||||||||||  |           
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaact-----ataaaaataaagaaatcaaacagcttta--cctttttt 40035991  T
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  40035990 cttaaagagttttattttaactttattttaaagtagcttttagaccg 40035944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 36769226 - 36769298
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||||||||  |||||||||||||| ||||||||| ||||||||||||| ||||    
T  36769226 aaaaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 4404295 - 4404447
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||  | |||| ||||            |||||||||||||||    
T  4404295 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa--attttagaactaaaaaaaa----taaagaaaccaaaca 4404388  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| |        |||||| | ||||||||||||||||||||||||||||||||||||    
T  4404389 gctttaac--tttttccttaaataactttattttaactttgttttaaagtagcttttagac 4404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 4492506 - 4492356
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| |  |||||||| ||| ||||            ||||||| |||||||    
T  4492506 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaa-tttaaaataaccttagaact----aaaaaaaataaagaatccaaaca 4492412  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagctttta 182  Q
    |||||| |        ||||||||||||||||||||||||||||||||||||||||||    
T  4492411 gctttaac--ttttttcttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 185
Target Start/End: Original strand, 5483406 - 5483562
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||| || ||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||             |||||||||||||||    
T  5483406 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac--aaaaaaaaatataaagaaaccaaaca 5483503  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    |||||| |        ||| ||||| |||||||||||||||||||||||||||||||||||    
T  5483504 gctttaac--tttttcctttaagagttttattttaactttgttttaaagtagcttttagac 5483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 5526108 - 5526177
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||| ||||    
T  5526108 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 20135158 - 20135099
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagctttt 74  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||    
T  20135158 gacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 16933447 - 16933401
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16933447 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16933401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 16938830 - 16938784
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16938830 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 16938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 3840021 - 3840090
Alignment:
Q  28 aaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| || ||||||||||||||||||||||||| |||||| ||||||||| ||||||| || |||||||    
T  3840021 aaatattagattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaatagctgtaaaact 3840090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 184
Target Start/End: Complemental strand, 20135077 - 20135005
Alignment:
Q  110 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||    
T  20135077 taaagaaaccaaacagctttagc--ttttttcttaaagggctttattttaactttgttttaaagtagcttttaga 20135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 43111035 - 43111076
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaa 66  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  43111035 aaaaaataataaattcaaagttttgtacaatattttgccaaa 43111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 43111100 - 43111175
Alignment:
Q  110 taaagaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||| |||||||||||||||||||       |||||||||||||||||||| |||||||| |||||||||||||||||    
T  43111100 taaaaaaaccaaacagctttagccttttt--cttaaagagctttattttaattttgttttgaagtagcttttagaccg 43111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 185
Target Start/End: Original strand, 23154632 - 23154789
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaacca 120  Q
    ||||| |||| || ||| ||| |||||||||||||||||||||||||| |||||||||  |||||||||||| ||||            |||||||||||    
T  23154632 caccacaaaaaaaaaaaatcatagttttgtacaatattttgccaaacaacttttaact-taaaataactttagaact----aaaaaaaataaagaaacca 23154726  T
Q  121 aacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagac 185  Q
    ||| |||||| |        |||||| | ||||||||||||||||||||||||||||||||||||    
T  23154727 aacggctttaac--tttttccttaaataactttattttaactttgttttaaagtagcttttagac 23154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 36765688 - 36765734
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  36765688 cttaaagaactttattttaactttgttttaaaatagcttttagaccg 36765734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 44651839 - 44651793
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||    
T  44651839 cttaaagggctttattttaactttgttttaaagtaacttttagaccg 44651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 19036402 - 19036360
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19036402 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 19036360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 20718234 - 20718276
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  20718234 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 20718276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 29488481 - 29488523
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  29488481 aaaaaataataaattcaaag-tttgtacaatattttgccaaaca 29488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 33232697 - 33232655
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33232697 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 33232655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 34284839 - 34284797
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34284839 aaaaaataataaattcaaagttt-gtacaatattttgccaaaca 34284797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 42915378 - 42915429
Alignment:
Q  46 tttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||    
T  42915378 tttgtacaatattttgccaaacaacatttaacttaaaaatagctttaaaact 42915429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 16933550 - 16933500
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 66  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  16933550 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaa 16933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 16938933 - 16938883
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 66  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  16938933 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaa 16938883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 37143542 - 37143584
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttaga 184  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  37143542 ttaaagagttttattttaactttattttaaagtagcttttaga 37143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 38049198 - 38049152
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  38049198 cttaaagagctttattttaactttgttttaaattaggttttataccg 38049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 38049299 - 38049237
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| |||||| ||||||||||||| ||||||| ||||||| | |||||||| |||||||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaact 38049237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 42828845 - 42828799
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||||    
T  42828845 cttaaagacctttattttaactttgttttgaagtaacttttagaccg 42828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 4616173 - 4616218
Alignment:
Q  142 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  4616173 ttaaagagctttattttaattttgttttaaagtattttttagaccg 4616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 5526226 - 5526259
Alignment:
Q  151 tttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||||||||||||||||||||    
T  5526226 tttattttaactttgttttaaagtagcttttaga 5526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 17816601 - 17816661
Alignment:
Q  36 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  17816601 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 17816661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 19050400 - 19050340
Alignment:
Q  36 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| ||||||| | ||||||||    
T  19050400 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaatagccttaaaact 19050340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 36769344 - 36769381
Alignment:
Q  148 agctttattttaactttgttttaaagtagcttttagac 185  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  36769344 agctttattttaactttgttttaaaatagcttttagac 36769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 182
Target Start/End: Original strand, 3840137 - 3840169
Alignment:
Q  150 ctttattttaactttgttttaaagtagctttta 182  Q
    |||||||||||||||||||||||||||||||||    
T  3840137 ctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  41 aaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||  ||||||| |||||| ||||||||| ||||||||||||| ||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 45
Target Start/End: Complemental strand, 19758191 - 19758160
Alignment:
Q  14 cagacaccaccaaaaaataataaattcaaagt 45  Q
    ||||||||||||||||||||||||||||||||    
T  19758191 cagacaccaccaaaaaataataaattcaaagt 19758160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 181
Target Start/End: Original strand, 20482404 - 20482435
Alignment:
Q  150 ctttattttaactttgttttaaagtagctttt 181  Q
    ||||||||||||||||||||||||||||||||    
T  20482404 ctttattttaactttgttttaaagtagctttt 20482435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 20762915 - 20762957
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaaca 68  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  20762915 aaaaaataataaattcaaag-tttgtacaatattttgtcaaaca 20762957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 15641229 - 15641275
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  15641229 cttaaagaactttattgtaactttgtattaaaatagcttttagaccg 15641275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 47171750 - 47171796
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||| ||||| |||||||||||    
T  47171750 cttaaaggtctttattttaactttgttttgaagtaacttttagaccg 47171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 42828956 - 42828881
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||||| |||| || ||||||||||    
T  42828956 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaagtagctttaaaact 42828881  T

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Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 42915466 - 42915506
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttt 181  Q
    |||||||| |||||||||||||||||||| ||||| |||||    
T  42915466 cttaaagacctttattttaactttgttttgaagtaactttt 42915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 42995355 - 42995414
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  42995355 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 42995414  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 47840841 - 47840881
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagctttt 181  Q
    |||||| ||||||||||||||||||| ||||||||| ||||    
T  47840841 cttaaatagctttattttaactttgtcttaaagtagttttt 47840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 7364 - 7204
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||             ||| ||||||||||    
T  7364 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaactaaaaaaaaaaaaaaaaaaaaccaaaca 7265  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  7264 gctttagcc--tttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7204  T

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Target: scaffold0024 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 90542 - 90374
Alignment:
Q  17 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaaga 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |            ||||||    
T  90542 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa-ttaaaaaaataaataaaga 90444  T
Q  116 aaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||        ||||||   |||||||||||||||||||||||||||||||||||||    
T  90443 aaccaaacagctttagcctttttt--ttaaaggattttattttaactttgttttaaagtagcttttagaccg 90374  T

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Target: scaffold0024; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 187
Target Start/End: Complemental strand, 110600 - 110442
Alignment:
Q  24 caaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaac 123  Q
    ||||||| || ||| |||||||||  ||||||||||||| ||||| ||||||||| ||||||||||||| || |            |||||||| |||||    
T  110600 caaaaaaaaaaaaaatcaaagtttcttacaatattttgctaaacaacttttaacttaaaaataactttagaagt---aaaaaaaaataaagaaaacaaac 110504  T
Q  124 agctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||         ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  110503 agctttagc--tttttcgttaaagaactttattttaactttgttttaaagtagcttttaaaccg 110442  T

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Target: scaffold0198 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 15333 - 15174
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaaagaaaccaaaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||            |||||||||||||||    
T  15333 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact---aaaaaaaaataaagaaaccaaaca 15237  T
Q  125 gctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||           ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15236 gctttaattttttttttttaaaaagctttattttaactttgttttaaagtagcttttagaccg 15174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 7656 - 7574
Alignment:
Q  16 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  7656 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 7527 - 7493
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttaga 184  Q
    ||||||||||||||||||||||| |||||||||||    
T  7527 ctttattttaactttgttttaaaatagcttttaga 7493  T

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Target: scaffold0020 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 132647 - 132817
Alignment:
Q  14 cagacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaactnnnnnnnnnnnntaa 112  Q
    ||||||| |||||||| |||||||||| |||||||  ||||||||||||||||||| ||||||| | ||||||||||||| ||||             ||    
T  132647 cagacacaaccaaaaagataataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaactaaaaaaaaataaaaa 132745  T
Q  113 agaaaccaaacagctttagccnnnnnnncttaaagagctttattttaactttgttttaaagtagcttttagacc 186  Q
    | ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||    
T  132746 ataaaccaaacagctttagc--ttttttcttaaagagctttattttaactttgttttaaagtagcttttagacc 132817  T

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Target: scaffold0768 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 6375 - 6308
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  6375 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataatttta 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 229101 - 229156
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 229156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 229195 - 229241
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||    
T  229195 cttaaaggactttattttaactttgttttaaaggagcttttagaccg 229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 228 - 182
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  228 cttaaagagctttattttaactttgttttaaagtaacttttagaccg 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 1072 - 1127
Alignment:
Q  42 aagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||||||||||||    
T  1072 aagttttgaaaaatattttgccaaacaacttttaacttaaaaataactttaaaact 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 1174 - 1247
Alignment:
Q  150 ctttattttaactttgttttaaagtagcttttagaccgnnnnnnngtctgttcaaacggtacctaaatatgttt 223  Q
    |||||||||||||||||||||||  |||||||||||||       ||||| |||||||||||||||||| ||||    
T  1174 ctttattttaactttgttttaaaagagcttttagaccgtaaaaaagtctggtcaaacggtacctaaataagttt 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 138101 - 138034
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataacttta 92  Q
    |||||| || ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||||||||    
T  138101 aaaaaaaaaaaaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataacttta 138034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 137990 - 137944
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  137990 cttaaagagctttattttaactttgttttaaagtaatttttagaccg 137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1822 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 356 - 402
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  356 cttaaagagttttattttaactttgttttaaagtaacttttagaccg 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 5793 - 5732
Alignment:
Q  37 attcaaagttttgtacaatattttgccaaacagcttttaactcaa-aaataactttaaaact 97  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| || ||||||||||||||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactttaaaact 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 31633 - 31572
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||||||||||| | |||||||||||||||||| | ||||||| |||| |||||||||||||    
T  31633 aaattcaaagttt-gcacaatattttgccaaacaacatttaacttaaaagtaactttaaaact 31572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 156640 - 156569
Alignment:
Q  25 aaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    |||||| || ||| ||||||||| |||||||||||||||||||| | ||||||| ||| ||| ||||||||||    
T  156640 aaaaaaaaaaaaaatcaaagttt-gtacaatattttgccaaacaacatttaacttaaacatatctttaaaact 156569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 99491 - 99537
Alignment:
Q  141 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 187  Q
    |||||||| |||||||||||||||||||| || || |||||||||||    
T  99491 cttaaagacctttattttaactttgttttgaaataacttttagaccg 99537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 236 - 295
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  236 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 1726 - 1785
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  1726 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 55458 - 55399
Alignment:
Q  35 aaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaa 95  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||| ||||||| ||||||||    
T  55458 aaattcaaagttt-gtacaatatttttgcaaacaacatttaacttaaaaatagctttaaaa 55399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 50244 - 50319
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||| | ||||||| ||||||||||    
T  50244 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 50319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 57777 - 57852
Alignment:
Q  21 caccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttaaaact 97  Q
    ||||| |||| || ||| ||||||||| ||||||||||||| |||||| | ||||| | ||||||| ||||||||||    
T  57777 caccataaaaaaaaaaaatcaaagttt-gtacaatattttgtcaaacaacatttaatttaaaaatagctttaaaact 57852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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