View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3943_low_60 (Length: 250)
Name: NF3943_low_60
Description: NF3943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3943_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7950671 - 7950878
Alignment:
| Q |
1 |
tactctaactctggactcataaaagatctattccatgacatgatgcatctaatacttcaaataaaaatcttcctttagatttcttagatatctggtagga |
100 |
Q |
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| T |
7950671 |
tactctaactctggactcataaaagatctattccatgacatgatgcatctaatactttaaataaaaatcttcctttagatttcttagatatctggtagga |
7950770 |
T |
|
| Q |
101 |
ttataataaatgtttgctttgcgagccatttggtgattattcttctagaatgccttaatatatgatattgataaaagtttcttctatataatatgatcta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
7950771 |
ttataataaatgtttgctttgcgagccatttggtgattattcttctagaatgccttaatatatgatattgataaaagtttcttctatataatatgctcta |
7950870 |
T |
|
| Q |
201 |
tttttgtt |
208 |
Q |
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|||||||| |
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| T |
7950871 |
tttttgtt |
7950878 |
T |
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