View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3943_low_76 (Length: 218)
Name: NF3943_low_76
Description: NF3943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3943_low_76 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 7926184 - 7926401
Alignment:
| Q |
1 |
agtactatcaccgactcgaataagattgttgaacatcatgatcatggtaatgaatggcttcatcaagatcattggaccttacctagtcatgaggaaacaa |
100 |
Q |
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| T |
7926184 |
agtactatcatcgactcgaataagattgttgaacatcatgatcatggtaatgaatggcttcatcaagatcattggaccttacctagtcatgatgaaacaa |
7926283 |
T |
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| Q |
101 |
cgcaacctcttcatgcttcctcttcaagtcaagaattagactctttgttcacacttgaattaacacaaaagcaagaacttgatagtgcaactgataagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7926284 |
cgcaacctcttcatgcttcctcttcaagtcaagaattagactctttgttcacacttgaattaacacaaaagcaagaacttgatagtgcaactgataagaa |
7926383 |
T |
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| Q |
201 |
acatgaaggtactattat |
218 |
Q |
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|||||||||||||||||| |
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| T |
7926384 |
acatgaaggtactattat |
7926401 |
T |
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