View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3945_high_5 (Length: 367)

Name: NF3945_high_5
Description: NF3945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3945_high_5
NF3945_high_5
[»] chr2 (35 HSPs)
chr2 (10-311)||(20900486-20900809)
chr2 (26-115)||(13724102-13724192)
chr2 (39-114)||(36089457-36089532)
chr2 (184-251)||(9531596-9531663)
chr2 (60-150)||(36688887-36688977)
chr2 (185-251)||(43573127-43573193)
chr2 (190-251)||(17429269-17429330)
chr2 (199-240)||(38430114-38430155)
chr2 (60-113)||(40713869-40713922)
chr2 (184-240)||(4807825-4807881)
chr2 (190-250)||(12520064-12520124)
chr2 (185-245)||(12882042-12882102)
chr2 (185-240)||(227419-227474)
chr2 (185-240)||(2610818-2610873)
chr2 (185-240)||(3635320-3635375)
chr2 (185-240)||(3866302-3866357)
chr2 (185-240)||(17670698-17670753)
chr2 (199-250)||(25384689-25384740)
chr2 (185-240)||(25834908-25834963)
chr2 (185-240)||(30306262-30306317)
chr2 (185-240)||(38328367-38328422)
chr2 (185-251)||(3481373-3481439)
chr2 (190-240)||(11412940-11412990)
chr2 (190-240)||(12474929-12474979)
chr2 (190-240)||(28508908-28508958)
chr2 (190-240)||(36183681-36183731)
chr2 (190-240)||(41763045-41763095)
chr2 (190-251)||(10516751-10516812)
chr2 (213-250)||(19015959-19015996)
chr2 (40-141)||(23227287-23227388)
chr2 (200-240)||(8181010-8181050)
chr2 (185-241)||(12489799-12489855)
chr2 (199-251)||(33504443-33504495)
chr2 (190-250)||(39709203-39709263)
chr2 (25-92)||(41492895-41492963)
[»] chr4 (45 HSPs)
chr4 (40-141)||(23226018-23226119)
chr4 (185-251)||(45209202-45209268)
chr4 (185-251)||(55007965-55008031)
chr4 (185-250)||(31961263-31961328)
chr4 (47-136)||(41594673-41594762)
chr4 (59-115)||(44900120-44900176)
chr4 (40-103)||(38160387-38160450)
chr4 (200-250)||(1793682-1793732)
chr4 (47-141)||(35663936-35664030)
chr4 (190-240)||(47265197-47265247)
chr4 (202-251)||(1380589-1380638)
chr4 (185-245)||(30634103-30634163)
chr4 (190-250)||(56375510-56375570)
chr4 (185-240)||(436459-436514)
chr4 (185-240)||(4879106-4879161)
chr4 (185-240)||(21528518-21528573)
chr4 (48-115)||(25455398-25455465)
chr4 (199-250)||(46236709-46236760)
chr4 (185-240)||(50238612-50238667)
chr4 (185-240)||(50238698-50238753)
chr4 (212-251)||(50967052-50967091)
chr4 (185-240)||(52569512-52569567)
chr4 (40-114)||(6422508-6422582)
chr4 (190-236)||(26024852-26024898)
chr4 (190-240)||(31959816-31959866)
chr4 (65-115)||(35663954-35664004)
chr4 (185-251)||(35690490-35690556)
chr4 (185-251)||(45184130-45184196)
chr4 (38-92)||(50430431-50430485)
chr4 (185-250)||(6957818-6957883)
chr4 (199-240)||(7947167-7947208)
chr4 (185-250)||(8286659-8286724)
chr4 (199-240)||(27450191-27450232)
chr4 (184-241)||(40932920-40932977)
chr4 (185-238)||(46153940-46153993)
chr4 (190-251)||(47372923-47372984)
chr4 (199-240)||(50862861-50862902)
chr4 (190-251)||(51421949-51422010)
chr4 (185-250)||(53708014-53708079)
chr4 (200-240)||(4441083-4441123)
chr4 (203-251)||(15661887-15661935)
chr4 (184-240)||(19969411-19969467)
chr4 (221-253)||(30480340-30480372)
chr4 (199-251)||(31339743-31339795)
chr4 (190-250)||(44360306-44360366)
[»] chr7 (39 HSPs)
chr7 (190-250)||(7273320-7273380)
chr7 (24-156)||(7661074-7661207)
chr7 (190-240)||(46355858-46355908)
chr7 (185-250)||(1523863-1523928)
chr7 (187-240)||(6263489-6263542)
chr7 (199-251)||(28708600-28708652)
chr7 (190-250)||(31681022-31681082)
chr7 (190-250)||(40979930-40979990)
chr7 (200-252)||(42187659-42187711)
chr7 (185-240)||(2885719-2885774)
chr7 (185-240)||(11594190-11594245)
chr7 (185-240)||(12841272-12841327)
chr7 (185-240)||(22349850-22349905)
chr7 (190-245)||(27649005-27649060)
chr7 (185-240)||(28208325-28208380)
chr7 (185-240)||(29650614-29650669)
chr7 (185-240)||(31005435-31005490)
chr7 (185-240)||(31682599-31682654)
chr7 (185-240)||(33349803-33349858)
chr7 (185-240)||(39906369-39906424)
chr7 (38-88)||(2853738-2853788)
chr7 (185-251)||(4604766-4604832)
chr7 (190-240)||(25891118-25891168)
chr7 (190-240)||(31869104-31869154)
chr7 (199-245)||(33103151-33103197)
chr7 (185-251)||(36101774-36101840)
chr7 (190-240)||(37618175-37618225)
chr7 (185-251)||(40008428-40008494)
chr7 (199-240)||(6375098-6375139)
chr7 (199-240)||(35906212-35906253)
chr7 (185-250)||(43491528-43491593)
chr7 (185-250)||(44855171-44855236)
chr7 (185-250)||(48515495-48515560)
chr7 (185-257)||(5418287-5418359)
chr7 (36-92)||(9575472-9575528)
chr7 (190-250)||(34745967-34746027)
chr7 (200-240)||(35559005-35559045)
chr7 (200-240)||(42969928-42969968)
chr7 (199-251)||(47852306-47852358)
[»] chr5 (31 HSPs)
chr5 (190-251)||(11675749-11675810)
chr5 (190-240)||(20457003-20457053)
chr5 (190-240)||(36551376-36551426)
chr5 (190-251)||(9234105-9234166)
chr5 (40-92)||(36595789-36595841)
chr5 (185-240)||(2915493-2915548)
chr5 (185-240)||(4496614-4496669)
chr5 (212-251)||(7678696-7678735)
chr5 (196-251)||(15252752-15252807)
chr5 (185-240)||(26884686-26884741)
chr5 (185-240)||(29816612-29816667)
chr5 (190-245)||(35118324-35118379)
chr5 (190-240)||(408496-408546)
chr5 (190-240)||(3302074-3302124)
chr5 (199-241)||(9121089-9121131)
chr5 (190-240)||(13561388-13561438)
chr5 (217-251)||(18350931-18350965)
chr5 (200-250)||(34273233-34273283)
chr5 (202-251)||(1275483-1275532)
chr5 (199-240)||(5558371-5558412)
chr5 (190-251)||(5860053-5860114)
chr5 (202-251)||(27386559-27386608)
chr5 (185-250)||(28411896-28411961)
chr5 (199-240)||(30213805-30213846)
chr5 (190-251)||(38132555-38132616)
chr5 (199-240)||(38685197-38685238)
chr5 (199-239)||(1287590-1287630)
chr5 (188-240)||(2075473-2075525)
chr5 (36-84)||(11574151-11574199)
chr5 (185-245)||(14665937-14665997)
chr5 (185-245)||(42576235-42576295)
[»] chr3 (34 HSPs)
chr3 (185-250)||(53519800-53519865)
chr3 (26-141)||(9213530-9213646)
chr3 (188-251)||(49888406-49888469)
chr3 (190-240)||(21862743-21862793)
chr3 (196-250)||(28245657-28245711)
chr3 (185-250)||(48508455-48508520)
chr3 (199-251)||(32170624-32170676)
chr3 (26-141)||(34988089-34988205)
chr3 (190-250)||(49042157-49042217)
chr3 (190-242)||(49933442-49933494)
chr3 (190-250)||(52139020-52139080)
chr3 (185-240)||(5169062-5169117)
chr3 (185-240)||(12096702-12096757)
chr3 (196-251)||(24541340-24541395)
chr3 (39-114)||(41524515-41524590)
chr3 (199-250)||(41529981-41530032)
chr3 (25-142)||(26019479-26019596)
chr3 (185-251)||(29601111-29601177)
chr3 (190-240)||(31566163-31566213)
chr3 (185-251)||(35481147-35481213)
chr3 (212-250)||(38850341-38850379)
chr3 (185-251)||(49503565-49503631)
chr3 (188-241)||(659754-659807)
chr3 (199-240)||(24778620-24778661)
chr3 (199-240)||(40672378-40672419)
chr3 (190-239)||(48734149-48734198)
chr3 (24-92)||(51406736-51406805)
chr3 (199-240)||(52927859-52927900)
chr3 (199-251)||(388273-388325)
chr3 (203-251)||(6780678-6780726)
chr3 (37-141)||(33942944-33943048)
chr3 (199-251)||(40116349-40116401)
chr3 (186-234)||(44102954-44103002)
chr3 (199-251)||(46367398-46367450)
[»] chr1 (39 HSPs)
chr1 (190-251)||(25715328-25715389)
chr1 (185-240)||(44751714-44751769)
chr1 (201-251)||(5338932-5338982)
chr1 (25-82)||(11897053-11897111)
chr1 (59-141)||(16448142-16448224)
chr1 (185-251)||(37430417-37430483)
chr1 (185-251)||(41560448-41560514)
chr1 (25-141)||(11897068-11897185)
chr1 (190-251)||(21769713-21769774)
chr1 (190-251)||(37462878-37462939)
chr1 (184-240)||(1210975-1211031)
chr1 (24-83)||(16448180-16448240)
chr1 (190-250)||(44941778-44941838)
chr1 (80-156)||(44953062-44953138)
chr1 (187-239)||(52073047-52073099)
chr1 (185-240)||(25979228-25979283)
chr1 (185-240)||(30202127-30202182)
chr1 (185-240)||(43481795-43481850)
chr1 (185-251)||(2914120-2914186)
chr1 (185-251)||(28090691-28090757)
chr1 (190-240)||(29577482-29577532)
chr1 (184-250)||(38807667-38807733)
chr1 (190-240)||(49347395-49347445)
chr1 (190-240)||(52561591-52561641)
chr1 (190-240)||(52921310-52921360)
chr1 (190-251)||(8796428-8796489)
chr1 (185-250)||(15086142-15086207)
chr1 (196-245)||(19908043-19908092)
chr1 (185-250)||(22090316-22090381)
chr1 (199-240)||(22175375-22175416)
chr1 (183-240)||(37311750-37311807)
chr1 (25-92)||(17556816-17556884)
chr1 (199-251)||(27847811-27847863)
chr1 (190-250)||(28533687-28533747)
chr1 (190-234)||(29129020-29129064)
chr1 (201-245)||(32404539-32404583)
chr1 (190-250)||(40568412-40568472)
chr1 (200-240)||(43240391-43240431)
chr1 (200-240)||(50257800-50257840)
[»] chr8 (22 HSPs)
chr8 (199-251)||(14742849-14742901)
chr8 (185-251)||(490554-490620)
chr8 (190-251)||(1928589-1928650)
chr8 (190-251)||(35323992-35324053)
chr8 (185-250)||(36545369-36545434)
chr8 (199-251)||(30689954-30690006)
chr8 (185-240)||(11523720-11523775)
chr8 (185-240)||(14742079-14742134)
chr8 (190-240)||(10668499-10668549)
chr8 (190-236)||(23492268-23492314)
chr8 (190-240)||(25473405-25473455)
chr8 (24-85)||(33057664-33057726)
chr8 (190-240)||(44529455-44529505)
chr8 (190-240)||(45419465-45419515)
chr8 (199-240)||(2216516-2216557)
chr8 (185-238)||(15215409-15215462)
chr8 (190-251)||(35914603-35914664)
chr8 (185-241)||(7531641-7531697)
chr8 (200-240)||(12491150-12491190)
chr8 (25-92)||(32211362-32211430)
chr8 (200-240)||(36394960-36395000)
chr8 (199-251)||(45041327-45041379)
[»] chr6 (12 HSPs)
chr6 (199-250)||(30031476-30031527)
chr6 (190-251)||(5897676-5897737)
chr6 (185-250)||(12890795-12890860)
chr6 (185-240)||(28085606-28085661)
chr6 (200-250)||(9109521-9109571)
chr6 (190-240)||(9707000-9707050)
chr6 (199-241)||(32945477-32945519)
chr6 (190-240)||(34934832-34934882)
chr6 (190-250)||(1615225-1615285)
chr6 (199-251)||(4245883-4245935)
chr6 (190-238)||(12133904-12133952)
chr6 (190-238)||(29931068-29931116)
[»] scaffold1318 (1 HSPs)
scaffold1318 (190-240)||(561-611)
[»] scaffold0168 (1 HSPs)
scaffold0168 (185-240)||(28886-28941)
[»] scaffold0018 (1 HSPs)
scaffold0018 (185-240)||(31698-31753)
[»] scaffold0050 (1 HSPs)
scaffold0050 (185-251)||(58223-58289)


Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 10 - 311
Target Start/End: Complemental strand, 20900809 - 20900486
Alignment:
Q  10 ataatactctaccgtatactccctccgtcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20900809 ataatactctaccgtatactccctccgtcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaa 20900710  T
Q  110 cttttgccgacccaactgtcttttataaatagaccc----agagagagtatcttgactcaagtcaaaccattgaacttcacaataacaagaatcaagcct 205  Q
    ||||||| ||||||| ||||| ||||||||||| ||    ||||||||||||  |||||||||||||| |||||||||||||||||||| ||||||||||    
T  20900709 cttttgctgacccaaatgtctcttataaatagaaccagagagagagagtatcacgactcaagtcaaactattgaacttcacaataacaacaatcaagcct 20900610  T
Q  206 tatctaactaagtgaggtcggctacatggatcaaactacgtcata------------------aaaccatctaactcaatattcatccatcttttctaca 287  Q
    ||||||| |||||||||||||||||||||||||||||||||||||                  |||||||| ||||||||||||||||||||||||||||    
T  20900609 tatctaattaagtgaggtcggctacatggatcaaactacgtcataatactctatcacatgcttaaaccatccaactcaatattcatccatcttttctaca 20900510  T
Q  288 acaatcacaatcgttataagatgt 311  Q
    |||||||||||| | |||||||||    
T  20900509 acaatcacaatcatcataagatgt 20900486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 13724102 - 13724192
Alignment:
Q  26 tactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttg 115  Q
    ||||||||||| |||||||||||||||| |  ||||||||||||| |||| |||| ||||| |||| |||||| ||||| |||||||||||    
T  13724102 tactccctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttg 13724192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 36089457 - 36089532
Alignment:
Q  39 ctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaactttt 114  Q
    ||||||| |||||||| |||||||||||||| || ||||||||| ||||||||||  || ||||| ||||||||||    
T  36089457 ctatttataagagatatttaggtcaacaaaagttaacgtatctgattcaaaatttaaactagatacatcaactttt 36089532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 9531596 - 9531663
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  9531596 cacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 9531663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 36688977 - 36688887
Alignment:
Q  60 gtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaatagacccagaga 150  Q
    ||||||||||||||| |||||| ||| ||||||  ||||||||| |||||| ||||  |||| |||| ||| ||||||||||  |||||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggaccagaga 36688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 43573127 - 43573193
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  43573127 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 43573193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 17429330 - 17429269
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||| |||||||| ||||||||||||| |||||| || |||||||    
T  17429330 aacaacaaccaagccttatctcactaagtggggtcggctacatgaatcaaattatgtcataa 17429269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 38430155 - 38430114
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||| |||||||| ||||||||||||||||||||    
T  38430155 caagccttatctcactaagtggggtcggctacatggatcaaa 38430114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 40713922 - 40713869
Alignment:
Q  60 gtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttt 113  Q
    |||||||||| |||| ||||| |||||||||||||||| ||||| |||||||||    
T  40713922 gtcaacaaaagttgatgtatcaggttcaaaatttggaccagatacatcaacttt 40713869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 4807881 - 4807825
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  4807881 cacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 4807825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 12520064 - 12520124
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  12520064 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccata 12520124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 12882042 - 12882102
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||| ||||| || |||||||||||  |||||||||||| |||||||||||||||| ||||    
T  12882042 acaacaacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacg 12882102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 227474 - 227419
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  227474 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 227419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 2610873 - 2610818
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||| |||||||| |||||| |||||||||||||    
T  2610873 acaacaacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaa 2610818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 3635320 - 3635375
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  3635320 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 3635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3866357 - 3866302
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  3866357 acaacaacaacaaccaagccttatcctactaagtggggtcggctacatggatcaaa 3866302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 17670753 - 17670698
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  17670753 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 17670698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 25384740 - 25384689
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||||||||||  |||||||||||| |||||||||||||||| |||| ||||    
T  25384740 caagccttatcccactaagtgaggttggctacatggatcaaattacgccata 25384689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 25834963 - 25834908
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  25834963 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 25834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 30306317 - 30306262
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  30306317 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 30306262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 38328367 - 38328422
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  38328367 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 38328422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 3481439 - 3481373
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||| || ||||||||| |||| ||||||||||||||| |||| |||||    
T  3481439 acaacaacaacaaccaagccttttccaactaagtggggtcagctacatggatcaaattacgccataa 3481373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 11412990 - 11412940
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||||| ||||||||||||||||||    
T  11412990 aacaacaaccaagccttatcctactaagtgagttcggctacatggatcaaa 11412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 12474929 - 12474979
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  12474929 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 12474979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 28508958 - 28508908
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  28508958 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 28508908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 36183731 - 36183681
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  36183731 aacaacaaccaagccttatcctactaagtggggtcggctacatggatcaaa 36183681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 41763045 - 41763095
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  41763045 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 41763095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 10516751 - 10516812
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||||| || ||||||||||||||| |||| |||||    
T  10516751 aacaacaaccaagccttatcccactaagtgagatcagctacatggatcaaattacgccataa 10516812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 19015996 - 19015959
Alignment:
Q  213 ctaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  19015996 ctaagtgaggtcggctacatggatcaaacgatgtcata 19015959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 23227287 - 23227388
Alignment:
Q  40 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaat 139  Q
    |||||| |||| ||| ||||||||||||||  ||| |||||||  | | ||||||||| | ||| |||||||||||  |||| || ||||| ||||||||    
T  23227287 tatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaaaatgtctcttataaat 23227386  T
Q  140 ag 141  Q
    ||    
T  23227387 ag 23227388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 8181050 - 8181010
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  8181050 aagccttatcccactaagtggggtcggctacatggatcaaa 8181010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 12489799 - 12489855
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||| |||||||    
T  12489799 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaac 12489855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 33504495 - 33504443
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| ||||||||| |||||||||| |||| |||||    
T  33504495 caagccttatcccactaagtggggtcggctagatggatcaaattacgccataa 33504443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 39709203 - 39709263
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||| ||||  |||||||| |||||||||||||||||||| |||| ||||    
T  39709203 aacaacaaccaagccatatcccactaagtggggtcggctacatggatcaaattacgccata 39709263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 41492895 - 41492963
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||||||||| ||||||||| |||||| | || ||||||||||| |||| |||||| ||| ||||||    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaatt 41492963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 40 - 141
Target Start/End: Original strand, 23226018 - 23226119
Alignment:
Q  40 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaat 139  Q
    |||||| |||||||| |||| |||||||||||||| |||||  ||||||||||||||  ||||| || ||||||||  ||||||| | |||| |||||||    
T  23226018 tatttataagagatatttagatcaacaaaaattgatgtatccagttcaaaatttggatcagatacataaacttttgttgacccaaatatcttctataaat 23226117  T
Q  140 ag 141  Q
    ||    
T  23226118 ag 23226119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 45209202 - 45209268
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||||||| |||||    
T  45209202 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaactacgccataa 45209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 55008031 - 55007965
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| ||||||||||    
T  55008031 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataa 55007965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 31961263 - 31961328
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||||||||||||||||| ||||||| ||||||||    
T  31961263 acaacaacaacaaccaagccttatcccactaagtgaggtcggctacatgaatcaaacgacgtcata 31961328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 41594762 - 41594673
Alignment:
Q  47 aagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttata 136  Q
    |||||| |||| |||||||  || |||| |||||||||||||||||||||| | ||| |||||||||||  ||||||||| ||| |||||    
T  41594762 aagagaaagttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 44900176 - 44900120
Alignment:
Q  59 ggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttg 115  Q
    ||||||||||| ||||||||||||||| || | |||||| |||||||||||||||||    
T  44900176 ggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttg 44900120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 38160387 - 38160450
Alignment:
Q  40 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagata 103  Q
    |||||| |||||| | ||||||||||||||||||| ||||||| || |||| ||||||||||||    
T  38160387 tatttataagagagatttaggtcaacaaaaattgatgtatctgattaaaaaattggacaagata 38160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 1793732 - 1793682
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||||||||| |||||||||| ||||||||||| |||||| |||||||||    
T  1793732 aagccttatctcactaagtgagatcggctacatgaatcaaattacgtcata 1793682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 35663936 - 35664030
Alignment:
Q  47 aagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaatag 141  Q
    |||||| |||| ||| |||||||||||| ||||||||| |||| |||| || ||||| ||||||||||||  || ||||| ||| ||||| ||||    
T  35663936 aagagaaagttgggtaaacaaaaattgatgtatctggtccaaattttgaaccagatacatcaacttttgcttacacaactttctcttatatatag 35664030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 47265197 - 47265247
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||||||    
T  47265197 aacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaa 47265247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 1380638 - 1380589
Alignment:
Q  202 gccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||  |||||||||||||||||||||||||||||| | |||||||    
T  1380638 gccttatcccactaagtgaggtcggctacatggatcaaacaaagtcataa 1380589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 30634103 - 30634163
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| ||||    
T  30634103 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacg 30634163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 56375570 - 56375510
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||| ||||||  |||||||||||||||||||||||||||||  ||||||||    
T  56375570 aacaacaaccaagtcttatcccactaagtgaggtcggctacatggatcaaatgacgtcata 56375510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 436514 - 436459
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  436514 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4879106 - 4879161
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  | |||||||||||||||||||||||||||    
T  4879106 acaacaacaacaaccaagccttatcccagtaagtgaggtcggctacatggatcaaa 4879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21528573 - 21528518
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  21528573 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 21528518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 25455465 - 25455398
Alignment:
Q  48 agagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttg 115  Q
    ||||| |||| | |||||||||||||| ||| |||||| ||||||||||| ||||  |||||||||||    
T  25455465 agagaaagttggatcaacaaaaattgatgtacctggtttaaaatttggaccagatgcatcaacttttg 25455398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 46236760 - 46236709
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  46236760 caagccttatcctactaagtggggtcggctacatggatcaaagtacgccata 46236709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 50238612 - 50238667
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  50238612 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 50238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 50238698 - 50238753
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  50238698 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 50238753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 50967052 - 50967091
Alignment:
Q  212 actaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  50967052 actaagtgaggtcggctacatggatcaaattacgacataa 50967091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 52569512 - 52569567
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  52569512 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52569567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 6422582 - 6422508
Alignment:
Q  40 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaactttt 114  Q
    |||||| |||||||| |||||||||||||||||||  ||| | ||| |||||||| |  ||||| ||||||||||    
T  6422582 tatttataagagatatttaggtcaacaaaaattgatatatttagtttaaaatttgaatcagataaatcaactttt 6422508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 26024852 - 26024898
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggat 236  Q
    ||||| || |||||||||||  |||||||||||||||||||||||||    
T  26024852 aacaacaaccaagccttatcccactaagtgaggtcggctacatggat 26024898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 31959816 - 31959866
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31959816 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31959866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 35664004 - 35663954
Alignment:
Q  65 caaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttg 115  Q
    ||||| |||| |||||||||||||||||||||| ||||| ||||| |||||    
T  35664004 caaaagttgatgtatctggttcaaaatttggaccagatacatcaatttttg 35663954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 35690556 - 35690490
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||| ||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  35690556 acaacaacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataa 35690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 45184130 - 45184196
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||| ||  ||||||||||  |||||||| ||||||||||||| ||| || ||||||||||    
T  45184130 acaataacaacaactaagccttatcccactaagtggggtcggctacatgaatcgaattacgtcataa 45184196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 50430431 - 50430485
Alignment:
Q  38 cctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||||| |||| ||| || |||||||||||||||| |||||||||| ||||||    
T  50430431 cctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaatt 50430485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 6957883 - 6957818
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| | ||||||||||||||||||  ||||||||    
T  6957883 acaacaacaacaaccaagccttatcccactaagtgggatcggctacatggatcaaatgacgtcata 6957818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 7947208 - 7947167
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  7947208 caagccttatcccactaagtggggtcggctacatggatcaaa 7947167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 8286724 - 8286659
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| || |||||||||||||||||  ||||||||    
T  8286724 acaacaacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatgacgtcata 8286659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 27450191 - 27450232
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  27450191 caagccttatcccactaagtggggtcggctacatggatcaaa 27450232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 40932920 - 40932977
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    ||||| ||||| ||||||||||||||  || ||||| ||||||||||||| |||||||    
T  40932920 cacaacaacaacaatcaagccttatcccaccaagtggggtcggctacatgcatcaaac 40932977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 46153993 - 46153940
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatca 238  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||    
T  46153993 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatca 46153940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 47372984 - 47372923
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||||||||||||  |||||||  |||||||||||||||||| || | |||||||    
T  47372984 aacaacaatcaagccttatcccactaagtagggtcggctacatggatcagacgatgtcataa 47372923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 50862902 - 50862861
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  50862902 caagccttatcccactaagtggggtcggctacatggatcaaa 50862861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 51422010 - 51421949
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || ||||| |||||  |||||||||| | |||||||||||||||| ||||||||||    
T  51422010 aacaacaaccaagctttatcccactaagtgagattggctacatggatcaaattacgtcataa 51421949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 53708079 - 53708014
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| ||||||||||||||  ||||||||| |||| ||| ||||||||||  ||||||||    
T  53708079 acaacaacaacaatcaagccttatcccactaagtgatgtcgactaaatggatcaaatgacgtcata 53708014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 4441123 - 4441083
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  4441123 aagccttatcccactaagtggggtcggctacatggatcaaa 4441083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 15661887 - 15661935
Alignment:
Q  203 ccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  15661887 ccttatcccactaagtggggtcggctacatggatcaaattacgccataa 15661935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 19969467 - 19969411
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| ||||| || | |||||||||  |||||||| ||||||||||||||||||||    
T  19969467 cacaacaacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaa 19969411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 30480372 - 30480340
Alignment:
Q  221 ggtcggctacatggatcaaactacgtcataaaa 253  Q
    |||||||||||||||||||| ||||||||||||    
T  30480372 ggtcggctacatggatcaaattacgtcataaaa 30480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 31339795 - 31339743
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| |||||| |||||||| ||||| |||||||||    
T  31339795 caagccttatcccactaagtggggtcggatacatggaccaaacgacgtcataa 31339743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 44360366 - 44360306
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  | |||||| ||||||||||||| ||||||| ||||||||    
T  44360366 aacaataaacaagccttatcctattaagtggggtcggctacatgaatcaaacgacgtcata 44360306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 7273380 - 7273320
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||||| |||||||||    
T  7273380 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaattacgtcata 7273320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 156
Target Start/End: Original strand, 7661074 - 7661207
Alignment:
Q  24 tatactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgaccc 122  Q
    |||||||||| || ||||||||| |||||| | ||| ||||| |||| |||| ||| |||||  |||| |||||| ||||| |||||||||||  |||||    
T  7661074 tatactcccttcgatcctatttataagagaaatttatgtcaataaaagttgatgtagctggtaaaaaaattggactagatacatcaacttttgttgaccc 7661173  T
Q  123 aactgtcttttataaatagacccagagagagtat 156  Q
    || |||||  |||||||||  |||||| ||||||    
T  7661174 aaatgtctcatataaataggaccagagggagtat 7661207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 46355858 - 46355908
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaa 46355908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 1523928 - 1523863
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || ||||||||||||  ||||||||||| ||||||||| |||||| |||||||||    
T  1523928 acaacaacaacaaccaagccttatctccctaagtgaggttggctacatgaatcaaattacgtcata 1523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 6263542 - 6263489
Alignment:
Q  187 aataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  6263542 aataacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 6263489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 28708652 - 28708600
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  28708652 caagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 28708600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 31681022 - 31681082
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||| ||  |||||||| |||||||||||||||||||| |||||||||    
T  31681022 aacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaattacgtcata 31681082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 40979930 - 40979990
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  40979930 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccata 40979990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 42187711 - 42187659
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataaa 252  Q
    ||||||||||  |||||||| |||||||||||||||||||| |||| ||||||    
T  42187711 aagccttatcccactaagtggggtcggctacatggatcaaattacgccataaa 42187659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 2885719 - 2885774
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  2885719 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 2885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 11594245 - 11594190
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  11594245 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 11594190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 12841272 - 12841327
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  12841272 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 12841327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 22349905 - 22349850
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| ||||||||||||||  |||||||| ||||| ||||||||||||||    
T  22349905 acaacaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaa 22349850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 27649060 - 27649005
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| ||||    
T  27649060 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacg 27649005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 28208325 - 28208380
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  28208325 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 28208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 29650669 - 29650614
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  29650669 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 29650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31005490 - 31005435
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31005490 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31005435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 31682599 - 31682654
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31682599 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33349803 - 33349858
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  | |||||||||||||||||||||||||||    
T  33349803 acaacaacaacaaccaagccttatcccattaagtgaggtcggctacatggatcaaa 33349858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 39906369 - 39906424
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  39906369 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 39906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 2853788 - 2853738
Alignment:
Q  38 cctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaa 88  Q
    |||||||| || |||||||| |||||||||||||||| |||| ||||||||    
T  2853788 cctatttataaaagatagtttggtcaacaaaaattgatgtatatggttcaa 2853738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 4604832 - 4604766
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| |||||||| |||| ||||||  |||||||| ||| |||||||||||||||| |||| |||||    
T  4604832 acaacaacaagaaccaagtcttatcccactaagtggggttggctacatggatcaaagtacgccataa 4604766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 25891168 - 25891118
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  25891168 aacaacaaccaagccttatcgtactaagtggggtcggctacatggatcaaa 25891118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 31869104 - 31869154
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31869104 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 33103197 - 33103151
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||||||||||  |||||||| |||||||||||||||||||| ||||    
T  33103197 caagccttatcctactaagtggggtcggctacatggatcaaattacg 33103151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 36101774 - 36101840
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| ||||  |||||||||||||| ||||||||||    
T  36101774 acaacaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataa 36101840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 37618225 - 37618175
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  37618225 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 37618175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 40008428 - 40008494
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||| ||||||| | ||||||||||| |||||||||||||||| ||| |||||    
T  40008428 acaacaacaacaaccaagtcttatctcattaagtgaggtcagctacatggatcaaacaacgacataa 40008494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 6375139 - 6375098
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  6375139 caagccttatcccactaagtggggtcggctacatggatcaaa 6375098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 35906212 - 35906253
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  35906212 caagccttatcccactaagtggggtcggctacatggatcaaa 35906253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 43491593 - 43491528
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||| ||| ||| |||||    
T  43491593 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatgaaattacatcata 43491528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 44855171 - 44855236
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||| |||| |||| ||||    
T  44855171 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaccaaattacgccata 44855236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 48515560 - 48515495
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||| ||||||  |||||||| ||||||||||| |||||||| |||||||||    
T  48515560 acaacaacaaaaaccaagtcttatcccactaagtggggtcggctacacggatcaaattacgtcata 48515495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 5418359 - 5418287
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataaaaccat 257  Q
    |||| ||||| || |||||||||||  ||||| || ||||| |||||||||||||| |||| |||||| ||||    
T  5418359 acaacaacaacaaccaagccttatcccactaaatggggtcgactacatggatcaaattacgccataaatccat 5418287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 9575528 - 9575472
Alignment:
Q  36 gtcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||||||| |||||| |||| ||||||||||| |||| |||||| ||| ||||||    
T  9575528 gtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaatt 9575472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 34746027 - 34745967
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| ||||||||||||| ||||||| ||| ||||    
T  34746027 aacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacaacgccata 34745967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 35559005 - 35559045
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||| ||||| ||||||| |||||||||||||||    
T  35559005 aagccttatcttactaaatgaggtccgctacatggatcaaa 35559045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 42969968 - 42969928
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  42969968 aagccttatcccactaagtggggtcggctacatggatcaaa 42969928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 47852358 - 47852306
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||   ||||||| |||||||||||||||||||| |||| |||||    
T  47852358 caagccttatccccctaagtggggtcggctacatggatcaaattacgccataa 47852306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 11675810 - 11675749
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || ||||||||||| ||||||||| |||||||||||||||| |||||||| |||||    
T  11675810 aacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataa 11675749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 20457053 - 20457003
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| ||||||||||||||  |||||||| ||||||||||||||||||||    
T  20457053 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaa 20457003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 36551426 - 36551376
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  36551426 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaa 36551376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 9234166 - 9234105
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||||||||||||  |||||||| |||||| ||||||||||||| || |||||||    
T  9234166 aacaacaatcaagccttatcccactaagtggggtcggttacatggatcaaattatgtcataa 9234105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 36595789 - 36595841
Alignment:
Q  40 tatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||| |||||| ||||||||||||||||||||| ||||||| || ||||||    
T  36595789 tatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaatt 36595841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 2915493 - 2915548
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  2915493 acaacaacaataaccaagccttatcccactaagtggggtcggctacatggatcaaa 2915548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 4496669 - 4496614
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  4496669 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 4496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 251
Target Start/End: Complemental strand, 7678735 - 7678696
Alignment:
Q  212 actaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  7678735 actaagtggggtcggctacatggatcaaactacctcataa 7678696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 15252752 - 15252807
Alignment:
Q  196 aatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||||||||  |||||||| ||||||||||||| || ||||||| ||||||    
T  15252752 aatcaagccttatcccactaagtggggtcggctacatgaattaaactacatcataa 15252807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 26884686 - 26884741
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| |||||||||||||   |||||||| ||||||||||||||||||||    
T  26884686 acaacaacaacaatcaagccttattccactaagtggggtcggctacatggatcaaa 26884741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 29816667 - 29816612
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  29816667 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 29816612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 35118324 - 35118379
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    ||||| ||||||||||||||  ||||| ||||||||| ||||||||||||| ||||    
T  35118324 aacaacaatcaagccttatcccactaaatgaggtcgggtacatggatcaaattacg 35118379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 408496 - 408546
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  408496 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 408546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 3302124 - 3302074
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  3302124 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 3302074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 241
Target Start/End: Original strand, 9121089 - 9121131
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    |||||||||||  |||||||||||||||||||||| |||||||    
T  9121089 caagccttatcccactaagtgaggtcggctacatgaatcaaac 9121131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 13561388 - 13561438
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  13561388 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaa 13561438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 18350931 - 18350965
Alignment:
Q  217 gtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||||||||||||||||||| |||||||||    
T  18350931 gtgaggtcggctacatggatcaaacgacgtcataa 18350965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Complemental strand, 34273283 - 34273233
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||||||||| |||||||||||| ||||||||||||| ||  ||||||||    
T  34273283 aagccttatctcactaagtgaggttggctacatggatcgaatgacgtcata 34273233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 1275532 - 1275483
Alignment:
Q  202 gccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||  |||||||| ||||||||||||||||||||  |||||||||    
T  1275532 gccttatcccactaagtggggtcggctacatggatcaaatgacgtcataa 1275483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 5558412 - 5558371
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  5558412 caagccttatcccactaagtggggtcggctacatggatcaaa 5558371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 5860114 - 5860053
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||||||||||||  |||||||  |||||||||||| ||||||| |||| |||||    
T  5860114 aacaacaatcaagccttatcccactaagtagggtcggctacatagatcaaattacgccataa 5860053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 27386608 - 27386559
Alignment:
Q  202 gccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  27386608 gccttatcccactaagtggggtcggctacatggatcaaattacgccataa 27386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 28411961 - 28411896
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||| ||||||| ||| ||||    
T  28411961 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacaacgccata 28411896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 30213846 - 30213805
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  30213846 caagccttatcccactaagtggggtcggctacatggatcaaa 30213805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 38132616 - 38132555
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| ||||||| |||||||||||| |||| |||||    
T  38132616 aacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataa 38132555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 38685238 - 38685197
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaa 38685197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 1287590 - 1287630
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaa 239  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  1287590 caagccttatcccactaagtggggtcggctacatggatcaa 1287630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 2075473 - 2075525
Alignment:
Q  188 ataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||| ||||||||||||||  |||||||| ||| ||||||||| ||||||    
T  2075473 ataacaacaatcaagccttatcccactaagtggggttggctacatgaatcaaa 2075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 11574199 - 11574151
Alignment:
Q  36 gtcctatttacaagagatagttaggtcaacaaaaattgacgtatctggt 84  Q
    |||||||||| |||||| | |||||||||||||||||||  ||||||||    
T  11574199 gtcctatttataagagacatttaggtcaacaaaaattgaaatatctggt 11574151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 14665997 - 14665937
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||| ||||||| ||||    
T  14665997 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacg 14665937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 42576295 - 42576235
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||| ||||| || |||||||||||  |||||||  |||||||||||||||||||| ||||    
T  42576295 acaacaacaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaattacg 42576235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 53519865 - 53519800
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||| |||||||| ||||||||||||||||||||  ||||||||    
T  53519865 acaacaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcata 53519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 9213646 - 9213530
Alignment:
Q  26 tactccctcc-gtcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaa 124  Q
    |||||||||| ||||||||||  ||||| | ||||||||||||||||||| |||| |||||  ||| || | | ||||| |||||||||||  |||  ||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaa 9213547  T
Q  125 ctgtcttttataaatag 141  Q
     ||||||||||||||||    
T  9213546 atgtcttttataaatag 9213530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 49888469 - 49888406
Alignment:
Q  188 ataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||| || ||| |||| || ||||||||| |||||||||||||||||||| ||||||||||    
T  49888469 ataacaacaaccaaaccttttccaactaagtggggtcggctacatggatcaaattacgtcataa 49888406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 21862743 - 21862793
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||||||||    
T  21862743 aacaacaagcaagccttatctcactaagtggggtcggctacatggatcaaa 21862793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 28245711 - 28245657
Alignment:
Q  196 aatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||  ||||||||    
T  28245711 aatcaagccttatctcactaagtgggatcggctacatggatcaaatgacgtcata 28245657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 48508520 - 48508455
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  48508520 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccata 48508455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 32170676 - 32170624
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| |||||| |||||||| |||||||||||||||||||| || |||||||    
T  32170676 caagctttatctcactaagtggggtcggctacatggatcaaattatgtcataa 32170624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 34988205 - 34988089
Alignment:
Q  26 tactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaa 124  Q
    ||||||||||| ||||||||| |||| ||| ||  |||||||| | |||| |||||| ||| ||||  ||||| ||||| |||||||||||  |||||||    
T  34988205 tactccctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaa 34988106  T
Q  125 ctgtcttttataaatag 141  Q
     ||||| | ||||||||    
T  34988105 atgtctctaataaatag 34988089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 49042217 - 49042157
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||| || ||||| |||||||||||||||||||| |||| ||||    
T  49042217 aacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccata 49042157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 49933442 - 49933494
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaact 242  Q
    ||||| |||||||| |||||  |||||||||||||||||||||||| ||||||    
T  49933442 aacaacaatcaagctttatcccactaagtgaggtcggctacatggaccaaact 49933494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 52139080 - 52139020
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||  ||||||||    
T  52139080 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcata 52139020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 5169117 - 5169062
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  5169117 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 5169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 12096702 - 12096757
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  12096702 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 12096757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 24541340 - 24541395
Alignment:
Q  196 aatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||||||||||||  |||||||| |||||| ||||||||||||| |||| |||||    
T  24541340 aatcaagccttatcccactaagtggggtcgggtacatggatcaaattacgccataa 24541395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 41524515 - 41524590
Alignment:
Q  39 ctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaactttt 114  Q
    |||||||||||||||| |||| ||||||| ||||||  ||| ||||||||||||| ||| | ||| |||| |||||    
T  41524515 ctatttacaagagatatttagatcaacaacaattgatatatttggttcaaaatttagactacataaatcatctttt 41524590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 41530032 - 41529981
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  41530032 caagccttatcccactaagtggggtcggctacatggatcaaattacgccata 41529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 26019479 - 26019596
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgaccca 123  Q
    ||||||| |||| ||||||||| |||||| | || ||||||| ||| || | |||||||||||||||||| | ||||||| || ||| ||||   |||||    
T  26019479 atactccttccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaaccca 26019577  T
Q  124 actgtcttttataaataga 142  Q
    ||| ||| |||||||||||    
T  26019578 actttctcttataaataga 26019596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 29601177 - 29601111
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| |||||||| |||||| ||||  |||||||| |||| ||||||||||||||| ||| ||||||    
T  29601177 acaacaacaagaaccaagccgtatcccactaagtggggtcagctacatggatcaaattacatcataa 29601111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 31566163 - 31566213
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31566163 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 35481213 - 35481147
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||| || |||||||||||  | |||||| ||||||||| ||| |||||| ||||||||||    
T  35481213 acaataacaacaaccaagccttatcccattaagtggggtcggctaaatgaatcaaattacgtcataa 35481147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 250
Target Start/End: Complemental strand, 38850379 - 38850341
Alignment:
Q  212 actaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  38850379 actaagtggggtcggctacatggatcaaattacgtcata 38850341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 49503565 - 49503631
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||  |||||||||||||||||||| |||| |||||    
T  49503565 acaacaacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaattacgccataa 49503631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 659807 - 659754
Alignment:
Q  188 ataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    ||||||| || ||||||||| |  |||||||| |||||||||||||||||||||    
T  659807 ataacaacaaccaagccttaccccactaagtggggtcggctacatggatcaaac 659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 24778620 - 24778661
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  24778620 caagccttatcccactaagtggggtcggctacatggatcaaa 24778661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 40672378 - 40672419
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  40672378 caagccttatcccactaagtgaggtcagctacatggatcaaa 40672419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 48734149 - 48734198
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaa 239  Q
    ||||| ||||||||||||||  |||||||| |||| ||||||||||||||    
T  48734149 aacaacaatcaagccttatcccactaagtggggtcagctacatggatcaa 48734198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 51406805 - 51406736
Alignment:
Q  24 tatactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    ||||||||||||| ||||||||| ||||||   || |||||||||||||||| |||||| ||| ||||||    
T  51406805 tatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaatt 51406736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 52927859 - 52927900
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  52927859 caagccttatcccactaagtggggtcggctacatggatcaaa 52927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 388273 - 388325
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| ||| |||||||| ||||||| ||||||||||    
T  388273 caagccttatcccactaagtggggttggctacattgatcaaattacgtcataa 388325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 6780678 - 6780726
Alignment:
Q  203 ccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||| |||||||| ||||||||||| |||||||| ||||||||||    
T  6780678 ccttttctcactaagtgtggtcggctacagggatcaaattacgtcataa 6780726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 33942944 - 33943048
Alignment:
Q  37 tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttata 136  Q
    ||||||||| |||||| | || ||||||||||| |||| |||||| ||| ||||||  | | | ||| || ||||||||  |||| |||| |||||||||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttata 33943043  T
Q  137 aatag 141  Q
    |||||    
T  33943044 aatag 33943048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 40116349 - 40116401
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||| |||||||||||| ||||||||| |||| |||||    
T  40116349 caagccttatcccactaagcgaggtcggctacgtggatcaaattacgccataa 40116401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 44102954 - 44103002
Alignment:
Q  186 caataacaagaatcaagccttatctaactaagtgaggtcggctacatgg 234  Q
    ||||||||| || |||||||||||  |||||||| ||||||||||||||    
T  44102954 caataacaacaaccaagccttatcctactaagtggggtcggctacatgg 44103002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 46367398 - 46367450
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||| || |||||| ||| ||||||||||||||||| |||||||||    
T  46367398 caagctttatccaattaagtggggtaggctacatggatcaaacgacgtcataa 46367450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 25715328 - 25715389
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  ||||||||||||||||||||||||||||| |||| |||||    
T  25715328 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataa 25715389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 44751769 - 44751714
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||||||||||||||||||||||||    
T  44751769 acaacaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaa 44751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 5338982 - 5338932
Alignment:
Q  201 agccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||| |||||||||||| |||||||||||||||| |||| |||||    
T  5338982 agccttatctcactaagtgaggttggctacatggatcaaattacgccataa 5338932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 11897053 - 11897111
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctg 82  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||| |||| |||||||    
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctg 11897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 16448142 - 16448224
Alignment:
Q  59 ggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaatag 141  Q
    ||||||||||| || | |||||||||||||||||  | | ||||| |||||||||||  ||||||||| ||| ||||||||||    
T  16448142 ggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaatag 16448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 37430417 - 37430483
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||| |||||||| | ||||||| ||||||||||||||| |||||    
T  37430417 acaacaacaacaaccaagccttatctcactaagtgggatcggctatatggatcaaactacgccataa 37430483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 41560514 - 41560448
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  41560514 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 41560448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 11897185 - 11897068
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatttggacaagatatatcaacttttgccgaccca 123  Q
    |||||||||||| ||||||||| |||||| | || ||||||||||| |||| ||||| |||| ||||||  |   ||||| |||||||||||  |||| |    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  124 actgtcttttataaatag 141  Q
    ||| ||| ||||||||||    
T  11897085 actttctcttataaatag 11897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 21769713 - 21769774
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  21769713 aacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataa 21769774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 37462878 - 37462939
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 37462939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 1211031 - 1210975
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  1211031 cacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 1210975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 16448240 - 16448180
Alignment:
Q  24 tatactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctgg 83  Q
    ||||||||||||| ||||||||| |||||| |||| ||||||||||| |||| ||||||||    
T  16448240 tatactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctgg 16448180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 44941778 - 44941838
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  44941778 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccata 44941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 44953138 - 44953062
Alignment:
Q  80 ctggttcaaaatttggacaagatatatcaacttttgccgacccaactgtcttttataaatagacccagagagagtat 156  Q
    |||||||||||||||||| ||||| ||||||||||   ||| ||| ||| | |||||||||||  ||||||||||||    
T  44953138 ctggttcaaaatttggaccagatacatcaacttttattgactcaaatgtttcttataaatagaatcagagagagtat 44953062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 52073047 - 52073099
Alignment:
Q  187 aataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaa 239  Q
    |||||||| ||||||||||||||  || ||||| |||||||||||||||||||    
T  52073047 aataacaacaatcaagccttatcccaccaagtggggtcggctacatggatcaa 52073099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 25979228 - 25979283
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  25979228 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 25979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 30202127 - 30202182
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  30202127 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 30202182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 43481795 - 43481850
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  43481795 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 43481850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 2914120 - 2914186
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| ||| |||||||||||||||| |||| |||||    
T  2914120 acaacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaagtacgccataa 2914186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 28090691 - 28090757
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||| ||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  28090691 acaacaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataa 28090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 29577532 - 29577482
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  29577532 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 29577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 38807667 - 38807733
Alignment:
Q  184 cacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| ||||| || |||||||||||  |||||||| ||||||||||||||| |||| |||| ||||    
T  38807667 cacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccata 38807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 49347395 - 49347445
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  49347395 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 49347445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 52561591 - 52561641
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  52561591 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52561641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 52921360 - 52921310
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  52921360 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52921310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 8796489 - 8796428
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||| ||| |||| |||||    
T  8796489 aacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataa 8796428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 15086207 - 15086142
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| ||| ||||||||||||||||  ||||||||    
T  15086207 acaacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgtcata 15086142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 19908043 - 19908092
Alignment:
Q  196 aatcaagccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    ||||||||||||||  |||||||| |||||||||||||||| ||| ||||    
T  19908043 aatcaagccttatcccactaagtggggtcggctacatggataaaattacg 19908092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 22090381 - 22090316
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  ||| |||| ||||||||||||||||||||  ||||||||    
T  22090381 acaacaacaacaaccaagccttatcccacttagtggggtcggctacatggatcaaatgacgtcata 22090316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 22175416 - 22175375
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||  |||||||| ||||||||||||||||||||    
T  22175416 caagccttatcccactaagtggggtcggctacatggatcaaa 22175375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 37311750 - 37311807
Alignment:
Q  183 tcacaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||| ||||| || |||||||| ||  |||||||| ||||||||||||||||||||    
T  37311750 tcacaacaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaa 37311807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 17556884 - 17556816
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||||||||| ||||||||| |||||| | || ||||||||||| |||| |||||| ||| ||||||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaatt 17556816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 27847811 - 27847863
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||||| |||||||||||||| ||| |||| |||||    
T  27847811 caagccttatcccactaagtgagatcggctacatggataaaattacggcataa 27847863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 28533747 - 28533687
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||| ||||||  |||||||| ||||||||||||||||||||  ||||||||    
T  28533747 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgtcata 28533687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 29129064 - 29129020
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatgg 234  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||    
T  29129064 aacaaaaaccaagccttatctcactaagtggggtcggctacatgg 29129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 32404539 - 32404583
Alignment:
Q  201 agccttatctaactaagtgaggtcggctacatggatcaaactacg 245  Q
    |||||||||  |||||||| |||||||||||||||||||| ||||    
T  32404539 agccttatcccactaagtggggtcggctacatggatcaaattacg 32404583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 40568412 - 40568472
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||||||||||  |||||||| ||| |||||||||||||||| |||| ||||    
T  40568412 aacaacaaccaagccttatcccactaagtggggttggctacatggatcaaattacgccata 40568472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 43240391 - 43240431
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||||||||||||||||| ||||||    
T  43240391 aagccttatcccactaagtgaggtcggctacatgaatcaaa 43240431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 50257840 - 50257800
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||| |||||||| ||| ||||||||||||||||    
T  50257840 aagccttatctcactaagtggggttggctacatggatcaaa 50257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 14742849 - 14742901
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| ||| |||||||||||||||||||||||||||    
T  14742849 caagccttatcccactaagtggggttggctacatggatcaaactacgtcataa 14742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 490620 - 490554
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  490620 acaacaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 490554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 1928589 - 1928650
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| |||||    
T  1928589 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataa 1928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 35324053 - 35323992
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||||||||||  |||||||| |||||||||| ||||||||| ||||||||||    
T  35324053 aacaacaaccaagccttatcccactaagtggggtcggctacgtggatcaaattacgtcataa 35323992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 36545434 - 36545369
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||  ||||||||    
T  36545434 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcata 36545369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 30690006 - 30689954
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| |||||  |||||||| |||||||||||||||||||| ||||||||||    
T  30690006 caagcattatcccactaagtggggtcggctacatggatcaaattacgtcataa 30689954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 11523720 - 11523775
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  11523720 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 11523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 14742079 - 14742134
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  14742079 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 14742134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 10668499 - 10668549
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  ||||||||||||||||||||| |||||||    
T  10668499 aacaacaaccaagccttatcccactaagtgaggtcggctacatcgatcaaa 10668549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 23492314 - 23492268
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggat 236  Q
    ||||| || |||||||||||| |||||||| ||||||||||||||||    
T  23492314 aacaacaaacaagccttatctcactaagtggggtcggctacatggat 23492268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 25473405 - 25473455
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  25473405 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 25473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 33057726 - 33057664
Alignment:
Q  24 tatactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggtt 85  Q
    |||||||| |||| || |||||| |||||| |||| |||||||||||||||| ||||||||||    
T  33057726 tatactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggtt 33057664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 44529505 - 44529455
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  44529505 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 44529455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 45419515 - 45419465
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  45419515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 45419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 2216557 - 2216516
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||||||||||| ||| |||| ||||||||||||||||||||    
T  2216557 caagccttatctcactgagtggggtcggctacatggatcaaa 2216516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 15215409 - 15215462
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatca 238  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||    
T  15215409 acaacaacaacaaccaagccttatcctactaagtggggtcggctacatggatca 15215462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 35914603 - 35914664
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| || |||| ||||||| |||||||| |||| ||||||||||||||| |||| |||||    
T  35914603 aacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataa 35914664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 7531641 - 7531697
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    |||| ||||| || |||||||||||  |||||||||| ||||||||||| |||||||    
T  7531641 acaagaacaacaaccaagccttatcctactaagtgagttcggctacatgaatcaaac 7531697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 12491150 - 12491190
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  12491150 aagccttatcccactaagtggggtcggctacatggatcaaa 12491190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 32211362 - 32211430
Alignment:
Q  25 atactccctccg-tcctatttacaagagatagttaggtcaacaaaaattgacgtatctggttcaaaatt 92  Q
    |||||||||||| ||||||||| ||||||   || |||||||||||||||| |||||| ||| ||||||    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaatt 32211430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 36394960 - 36395000
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||||||||  |||||||| ||||||||||||||||||||    
T  36394960 aagccttatcccactaagtggggtcggctacatggatcaaa 36395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 45041327 - 45041379
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| |||| ||||||||||||||| |||| |||||    
T  45041327 caagccttatcccactaagtggggtcagctacatggatcaaattacgccataa 45041379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 30031527 - 30031476
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||| ||||    
T  30031527 caagccttatcccactaagtgaggtcggctacatggatcaaattacgccata 30031476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 5897737 - 5897676
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    ||||| ||||||||||||||  |||||||| | || ||||||||||||||| ||||||||||    
T  5897737 aacaacaatcaagccttatcccactaagtgggatccgctacatggatcaaattacgtcataa 5897676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 12890860 - 12890795
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| ||||| || |||||||||||  |||||||| |||||||||||||||||||| |||| ||||    
T  12890860 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccata 12890795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 28085661 - 28085606
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  28085661 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 28085606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 9109521 - 9109571
Alignment:
Q  200 aagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    |||| |||||| ||||| || |||||||||||||||||||||||| |||||    
T  9109521 aagcattatctcactaactggggtcggctacatggatcaaactacttcata 9109571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 9707050 - 9707000
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  9707050 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 9707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 32945519 - 32945477
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaac 241  Q
    ||||||||||  |||||||||| ||||||||||||||||||||    
T  32945519 caagccttattcaactaagtgatgtcggctacatggatcaaac 32945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 34934832 - 34934882
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  34934832 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 34934882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 1615225 - 1615285
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcata 250  Q
    ||||| || |||| ||||||  ||||| |||||||||||||||||||||||  ||||||||    
T  1615225 aacaacaaccaagtcttatcccactaaatgaggtcggctacatggatcaaatgacgtcata 1615285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 4245883 - 4245935
Alignment:
Q  199 caagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||||||||||  |||||||| |||||||||| |||||||||| | |||||||    
T  4245883 caagccttatcccactaagtggggtcggctacttggatcaaacgatgtcataa 4245935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 12133904 - 12133952
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatca 238  Q
    ||||| || |||||||| ||| |||||||| ||||||||||||||||||    
T  12133904 aacaacaaccaagccttttctcactaagtggggtcggctacatggatca 12133952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 29931116 - 29931068
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatca 238  Q
    |||||||| |||||||||||  |||||| | ||||||||||||||||||    
T  29931116 aacaagaaccaagccttatcctactaagcggggtcggctacatggatca 29931068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 611 - 561
Alignment:
Q  190 aacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    ||||| ||||||||||||||  |||||||| ||||||||||||||||||||    
T  611 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaa 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 28886 - 28941
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  28886 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 28941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31753 - 31698
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaa 240  Q
    |||| ||||| || |||||||||||  |||||||| ||||||||||||||||||||    
T  31753 acaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 58223 - 58289
Alignment:
Q  185 acaataacaagaatcaagccttatctaactaagtgaggtcggctacatggatcaaactacgtcataa 251  Q
    |||| ||||| ||| ||||||||||  |||||||  |||||||||||||||||||| |||| |||||    
T  58223 acaacaacaataatgaagccttatcccactaagttgggtcggctacatggatcaaattacgacataa 58289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University