View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3945_high_8 (Length: 329)

Name: NF3945_high_8
Description: NF3945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3945_high_8
NF3945_high_8
[»] chr2 (36 HSPs)
chr2 (17-158)||(19472589-19472746)
chr2 (258-322)||(2920464-2920528)
chr2 (258-322)||(24512228-24512292)
chr2 (159-273)||(2917619-2917733)
chr2 (168-270)||(35490625-35490727)
chr2 (159-273)||(45475376-45475490)
chr2 (258-320)||(41500184-41500246)
chr2 (160-273)||(41181374-41181487)
chr2 (158-273)||(19186682-19186797)
chr2 (259-322)||(40679545-40679608)
chr2 (163-273)||(43950265-43950374)
chr2 (160-273)||(28342460-28342573)
chr2 (160-273)||(35493364-35493477)
chr2 (256-322)||(29093779-29093842)
chr2 (258-322)||(43491170-43491234)
chr2 (160-230)||(16580482-16580552)
chr2 (153-234)||(19187285-19187366)
chr2 (258-322)||(2648178-2648242)
chr2 (270-322)||(16580559-16580611)
chr2 (258-322)||(39393098-39393162)
chr2 (168-263)||(24512112-24512207)
chr2 (259-322)||(26858175-26858238)
chr2 (159-234)||(45479856-45479931)
chr2 (258-316)||(10365746-10365804)
chr2 (159-273)||(34921782-34921895)
chr2 (252-320)||(28472142-28472214)
chr2 (269-322)||(34638212-34638262)
chr2 (159-273)||(23409524-23409638)
chr2 (173-235)||(43493318-43493380)
chr2 (168-273)||(41497417-41497522)
chr2 (159-267)||(19469921-19470028)
chr2 (160-267)||(41500263-41500370)
chr2 (200-273)||(1101075-1101148)
chr2 (160-273)||(9660078-9660191)
chr2 (166-267)||(12905492-12905593)
chr2 (160-273)||(25184853-25184965)
[»] chr4 (40 HSPs)
chr4 (159-322)||(34154376-34154539)
chr4 (160-322)||(56304814-56304975)
chr4 (159-273)||(29700325-29700439)
chr4 (159-267)||(4768614-4768722)
chr4 (250-322)||(34530743-34530815)
chr4 (225-320)||(6283417-6283512)
chr4 (209-322)||(39588078-39588191)
chr4 (258-322)||(56138313-56138377)
chr4 (159-273)||(958617-958730)
chr4 (159-273)||(21472507-21472621)
chr4 (252-322)||(51429277-51429347)
chr4 (164-273)||(49572923-49573032)
chr4 (258-322)||(44561278-44561342)
chr4 (159-273)||(37959743-37959857)
chr4 (258-322)||(958542-958606)
chr4 (256-322)||(42885508-42885576)
chr4 (160-266)||(38464796-38464901)
chr4 (160-273)||(4979940-4980053)
chr4 (159-267)||(955728-955836)
chr4 (256-319)||(243296-243359)
chr4 (258-318)||(1041996-1042056)
chr4 (269-320)||(28081530-28081582)
chr4 (159-215)||(49422079-49422135)
chr4 (159-263)||(51426473-51426577)
chr4 (259-308)||(4786296-4786345)
chr4 (159-216)||(18581375-18581432)
chr4 (159-215)||(44558636-44558692)
chr4 (159-191)||(44561435-44561467)
chr4 (159-206)||(48256653-48256700)
chr4 (159-206)||(51644564-51644611)
chr4 (159-229)||(4774645-4774714)
chr4 (258-304)||(29700268-29700314)
chr4 (200-273)||(1044542-1044615)
chr4 (224-265)||(9472859-9472900)
chr4 (160-273)||(11494481-11494593)
chr4 (159-207)||(3450103-3450151)
chr4 (279-315)||(11287557-11287593)
chr4 (256-320)||(21017951-21018018)
chr4 (159-195)||(24417516-24417552)
chr4 (255-287)||(37865200-37865232)
[»] chr3 (53 HSPs)
chr3 (160-322)||(19454299-19454461)
chr3 (159-273)||(29929362-29929476)
chr3 (159-273)||(29978516-29978630)
chr3 (159-273)||(28611123-28611237)
chr3 (160-273)||(41579747-41579860)
chr3 (258-322)||(34694382-34694446)
chr3 (160-266)||(7247890-7247996)
chr3 (258-320)||(55207613-55207675)
chr3 (258-322)||(43568927-43568991)
chr3 (258-322)||(51696522-51696586)
chr3 (258-320)||(41803059-41803121)
chr3 (258-320)||(51402348-51402410)
chr3 (159-272)||(45101872-45101985)
chr3 (258-322)||(43476253-43476317)
chr3 (159-267)||(43571714-43571822)
chr3 (258-322)||(45101796-45101860)
chr3 (258-322)||(55385198-55385262)
chr3 (260-322)||(7245155-7245217)
chr3 (159-273)||(29918364-29918478)
chr3 (159-273)||(29967517-29967631)
chr3 (269-318)||(41137780-41137829)
chr3 (166-267)||(42804398-42804499)
chr3 (258-322)||(13896824-13896888)
chr3 (262-322)||(41577140-41577200)
chr3 (258-322)||(52570514-52570578)
chr3 (160-263)||(55267378-55267481)
chr3 (163-265)||(66841-66942)
chr3 (168-266)||(13896906-13897004)
chr3 (159-273)||(30256026-30256140)
chr3 (160-266)||(41577012-41577118)
chr3 (159-233)||(42807663-42807737)
chr3 (258-322)||(2271260-2271325)
chr3 (258-311)||(24703374-24703427)
chr3 (256-322)||(34648150-34648218)
chr3 (258-322)||(36134384-36134449)
chr3 (160-273)||(46344874-46344987)
chr3 (258-322)||(49609444-49609508)
chr3 (260-322)||(4004750-4004813)
chr3 (160-267)||(55207692-55207799)
chr3 (159-273)||(19440192-19440306)
chr3 (164-273)||(41802939-41803048)
chr3 (269-322)||(49219739-49219792)
chr3 (160-265)||(52570597-52570701)
chr3 (272-322)||(2426559-2426609)
chr3 (160-266)||(2432973-2433079)
chr3 (160-230)||(7837529-7837599)
chr3 (160-274)||(11380378-11380492)
chr3 (160-273)||(41805698-41805811)
chr3 (160-273)||(48250892-48251005)
chr3 (161-273)||(42756097-42756209)
chr3 (252-320)||(46402411-46402483)
chr3 (159-191)||(43568862-43568894)
chr3 (165-237)||(48246354-48246426)
[»] chr8 (27 HSPs)
chr8 (159-322)||(3395828-3395991)
chr8 (159-273)||(7168024-7168138)
chr8 (160-267)||(18441470-18441577)
chr8 (256-322)||(18441389-18441455)
chr8 (160-273)||(18438571-18438684)
chr8 (160-273)||(41858144-41858257)
chr8 (252-322)||(22547498-22547568)
chr8 (258-320)||(41858073-41858135)
chr8 (258-318)||(26451541-26451601)
chr8 (161-273)||(41855306-41855418)
chr8 (159-266)||(22577601-22577708)
chr8 (258-322)||(41274653-41274717)
chr8 (163-273)||(42602400-42602510)
chr8 (252-320)||(37779707-37779773)
chr8 (160-273)||(38872953-38873066)
chr8 (165-308)||(38871741-38871884)
chr8 (258-320)||(42602521-42602583)
chr8 (160-273)||(35389445-35389558)
chr8 (192-273)||(35940408-35940489)
chr8 (263-322)||(24860448-24860507)
chr8 (160-232)||(5300684-5300756)
chr8 (160-273)||(39751011-39751123)
chr8 (160-221)||(40077325-40077386)
chr8 (159-187)||(51341-51369)
chr8 (159-195)||(4866371-4866407)
chr8 (175-267)||(18205738-18205830)
chr8 (167-243)||(43690086-43690162)
[»] chr5 (34 HSPs)
chr5 (160-265)||(3603179-3603284)
chr5 (168-320)||(42865754-42865906)
chr5 (159-264)||(1398540-1398645)
chr5 (160-273)||(20192290-20192403)
chr5 (258-322)||(542738-542802)
chr5 (159-273)||(34682193-34682307)
chr5 (258-322)||(18307315-18307379)
chr5 (258-322)||(35564322-35564386)
chr5 (159-273)||(18538358-18538472)
chr5 (159-267)||(19228675-19228783)
chr5 (258-322)||(25497572-25497636)
chr5 (160-267)||(18310050-18310157)
chr5 (160-273)||(20200171-20200284)
chr5 (160-267)||(3600273-3600381)
chr5 (159-267)||(24053116-24053224)
chr5 (258-322)||(11346068-11346133)
chr5 (258-322)||(3600398-3600462)
chr5 (210-273)||(8702221-8702284)
chr5 (258-308)||(20192414-20192464)
chr5 (167-233)||(35567090-35567156)
chr5 (258-322)||(8537226-8537291)
chr5 (163-206)||(1401435-1401478)
chr5 (161-243)||(512793-512875)
chr5 (160-234)||(42537138-42537212)
chr5 (282-322)||(1401388-1401428)
chr5 (159-207)||(24049973-24050021)
chr5 (159-267)||(33993216-33993324)
chr5 (162-273)||(33995171-33995282)
chr5 (160-243)||(39743201-39743284)
chr5 (170-273)||(41201675-41201778)
chr5 (160-267)||(41799796-41799903)
chr5 (167-273)||(38968039-38968145)
chr5 (159-273)||(25499910-25500026)
chr5 (159-267)||(1397379-1397487)
[»] chr7 (43 HSPs)
chr7 (223-322)||(21188374-21188473)
chr7 (159-273)||(9494829-9494943)
chr7 (258-320)||(30355189-30355251)
chr7 (162-260)||(48316296-48316394)
chr7 (160-265)||(48314611-48314715)
chr7 (160-267)||(21185556-21185663)
chr7 (252-322)||(34139926-34139996)
chr7 (160-322)||(48269618-48269766)
chr7 (160-273)||(36392062-36392175)
chr7 (258-322)||(41047838-41047902)
chr7 (258-322)||(46863292-46863356)
chr7 (159-265)||(10225874-10225981)
chr7 (160-267)||(28980202-28980309)
chr7 (160-267)||(46863373-46863480)
chr7 (260-322)||(42682057-42682119)
chr7 (258-319)||(28980123-28980184)
chr7 (160-273)||(30355262-30355375)
chr7 (258-322)||(28115480-28115544)
chr7 (258-322)||(36394886-36394950)
chr7 (160-267)||(45361586-45361693)
chr7 (258-322)||(17838711-17838776)
chr7 (160-273)||(27453617-27453730)
chr7 (160-273)||(41047715-41047827)
chr7 (258-322)||(40587722-40587786)
chr7 (160-267)||(37340239-37340346)
chr7 (165-235)||(10708331-10708401)
chr7 (159-233)||(28112778-28112852)
chr7 (160-266)||(34622436-34622542)
chr7 (160-273)||(41049212-41049324)
chr7 (160-273)||(47060864-47060976)
chr7 (172-273)||(47776281-47776382)
chr7 (159-267)||(10705184-10705292)
chr7 (258-318)||(43686859-43686919)
chr7 (263-322)||(45364168-45364227)
chr7 (159-206)||(47673018-47673065)
chr7 (159-273)||(36186496-36186609)
chr7 (160-234)||(40590553-40590627)
chr7 (160-273)||(42681931-42682044)
chr7 (169-265)||(46860457-46860553)
chr7 (160-243)||(19044231-19044314)
chr7 (160-243)||(20710322-20710405)
chr7 (167-233)||(42684226-42684292)
chr7 (284-320)||(48316259-48316295)
[»] chr1 (49 HSPs)
chr1 (159-265)||(19053995-19054101)
chr1 (252-322)||(27487614-27487684)
chr1 (239-322)||(14174859-14174942)
chr1 (159-273)||(46973140-46973254)
chr1 (258-322)||(29763167-29763231)
chr1 (258-322)||(42572705-42572769)
chr1 (159-273)||(13173772-13173885)
chr1 (160-273)||(11183123-11183236)
chr1 (159-322)||(35526983-35527150)
chr1 (255-322)||(44596893-44596960)
chr1 (159-273)||(41804056-41804170)
chr1 (258-320)||(49927451-49927513)
chr1 (269-322)||(26637204-26637257)
chr1 (159-272)||(36908514-36908627)
chr1 (160-273)||(46141719-46141832)
chr1 (252-322)||(49426742-49426813)
chr1 (160-273)||(13972001-13972112)
chr1 (269-322)||(13972134-13972187)
chr1 (258-322)||(6434809-6434873)
chr1 (159-273)||(13178155-13178267)
chr1 (258-308)||(49395664-49395714)
chr1 (160-273)||(18975143-18975256)
chr1 (160-273)||(23276131-23276244)
chr1 (159-273)||(26633466-26633577)
chr1 (258-322)||(29435034-29435097)
chr1 (159-263)||(35521550-35521654)
chr1 (159-273)||(19499135-19499247)
chr1 (159-262)||(21944414-21944517)
chr1 (160-265)||(6437570-6437675)
chr1 (257-322)||(13147556-13147621)
chr1 (269-322)||(51269010-51269063)
chr1 (270-318)||(4208454-4208502)
chr1 (159-226)||(1656155-1656221)
chr1 (160-267)||(49927542-49927649)
chr1 (159-273)||(36076581-36076694)
chr1 (159-272)||(49857873-49857984)
chr1 (160-273)||(49924793-49924906)
chr1 (159-214)||(7965977-7966032)
chr1 (172-267)||(27485008-27485103)
chr1 (159-206)||(36072306-36072353)
chr1 (272-322)||(29709259-29709309)
chr1 (275-322)||(36908648-36908699)
chr1 (161-227)||(36911737-36911803)
chr1 (284-322)||(41779766-41779804)
chr1 (159-233)||(42570078-42570152)
chr1 (160-213)||(35181334-35181387)
chr1 (171-264)||(35258904-35258997)
chr1 (279-315)||(24364680-24364716)
chr1 (272-320)||(44338216-44338264)
[»] chr6 (24 HSPs)
chr6 (209-322)||(29061282-29061395)
chr6 (252-322)||(32034340-32034410)
chr6 (258-322)||(12783905-12783969)
chr6 (159-271)||(13479662-13479774)
chr6 (260-322)||(29065791-29065853)
chr6 (260-322)||(29074804-29074866)
chr6 (260-322)||(29079568-29079630)
chr6 (260-322)||(29107377-29107439)
chr6 (160-273)||(35021286-35021399)
chr6 (258-322)||(13401547-13401611)
chr6 (159-273)||(23958826-23958940)
chr6 (179-262)||(12783991-12784074)
chr6 (166-232)||(26701795-26701861)
chr6 (178-267)||(23986010-23986099)
chr6 (160-267)||(13404661-13404768)
chr6 (159-206)||(32026041-32026088)
chr6 (168-273)||(2050974-2051078)
chr6 (160-273)||(13401423-13401536)
chr6 (160-273)||(25141102-25141215)
chr6 (278-315)||(26855976-26856013)
chr6 (278-322)||(17596764-17596808)
chr6 (159-267)||(18001150-18001257)
chr6 (160-233)||(6320552-6320625)
chr6 (160-273)||(29286166-29286279)
[»] scaffold0388 (1 HSPs)
scaffold0388 (159-271)||(11735-11847)
[»] scaffold0176 (1 HSPs)
scaffold0176 (252-322)||(851-921)
[»] scaffold0192 (1 HSPs)
scaffold0192 (258-322)||(18847-18911)
[»] scaffold0199 (1 HSPs)
scaffold0199 (258-322)||(12335-12400)
[»] scaffold0360 (1 HSPs)
scaffold0360 (167-267)||(7333-7433)
[»] scaffold0618 (1 HSPs)
scaffold0618 (160-273)||(3823-3935)
[»] scaffold1379 (1 HSPs)
scaffold1379 (160-266)||(464-570)
[»] scaffold0147 (1 HSPs)
scaffold0147 (159-207)||(884-932)


Alignment Details
Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 158
Target Start/End: Complemental strand, 19472746 - 19472589
Alignment:
Q  17 actttgaagttagcacagttcatttggtatatatgtttaatttatgcggcaaaagtccgattc----------------ctaatttgcctcttttaccag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||||||||||||||||    
T  19472746 actttgaagttagcacagttcatttggtatatatgtttaatttatgcggcaaaagtccgattcggcaaaagtccgattcctaatttgcctcttttaccag 19472647  T
Q  101 ttttcatcgtcattttaccgtaaggtacagtaaggtcttcaatttactgaattgaaac 158  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19472646 ttttcatcgtcattttaccgtaaggtacaataaagtcttcaatttactgaattgaaac 19472589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 2920528 - 2920464
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2920528 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 2920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 24512228 - 24512292
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24512228 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 24512292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 2917619 - 2917733
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||  ||||||| |||||| ||||||||||| ||  |||| || ||| |||| ||    
T  2917619 aaattgttgttgacacatttcataaggctgaggcacaaaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattgaaaaaccggctaca 2917718  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  2917719 gttaactgccgagga 2917733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 35490625 - 35490727
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    |||||||||| |||||||||||||||||  | ||||||| ||||||||  ||||||| ||||||||| || |||||||| ||| ||||||||||||||||    
T  35490625 ttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacggttaactgccgaagaattcaaaaaccggctgcagttaactgc 35490724  T
Q  268 tga 270  Q
    |||    
T  35490725 tga 35490727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 45475376 - 45475490
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||   |||||| |||||| ||||||||||| ||  ||||||| ||| |||| ||    
T  45475376 aaattgatgttgacacatttcataaggctgagacacacaagtaaaatacgattttgccccctcggcagttaactgccgagaaattcaaaaaccggctaca 45475475  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  45475476 gttaactgccgagga 45475490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 41500246 - 41500184
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  41500246 agttaactgccgaggatcttctgctacaaatctggcataagctctctcatccattattcatct 41500184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 41181374 - 41181487
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||||||| |||||||||||| ||||  | |||||||  ||||||| |||||| ||||||||||| || |||||||||||| |||| ||     
T  41181374 aattgatgttgacacattgcataaggctgaggcacacgagtaaaatacgtttttgccccctcggcagttaactgccgaggaattcaataaccggctacat 41181473  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41181474 ttaactgccgagga 41181487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 19186682 - 19186797
Alignment:
Q  158 caaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgc 257  Q
    ||||||||||||||||||| |||||||||||||||||| || |||||||  ||||| | || ||| |||| |||||| ||  ||||||| ||  ||||||    
T  19186682 caaattgttgttgacacatatcataaggctgagacacacaagtaaaatacgtttttaccccatcggcagtaaactgccgagcaattcaaaaagcggctgc 19186781  T
Q  258 agttaactgctgagga 273  Q
    ||||||||||| ||||    
T  19186782 agttaactgctaagga 19186797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 40679608 - 40679545
Alignment:
Q  259 gttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  40679608 gttaactgccgaggatcttctgctacaaatctggaagaacctctctcatccattattcatctca 40679545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 273
Target Start/End: Complemental strand, 43950374 - 43950265
Alignment:
Q  163 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 262  Q
    |||||||||||||||| |||||||||||| |||  | ||||||| |||||||| |||||| |||||||||||||  |||||||| ||| | ||||| |||    
T  43950374 tgttgttgacacatttgataaggctgagaaacacgagtaaaatacatttttgccccctcggcagttaactgctgtggaattcaa-aaccgactgcaatta 43950276  T
Q  263 actgctgagga 273  Q
    ||||| |||||    
T  43950275 actgccgagga 43950265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 28342460 - 28342573
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||||| |||||||||| |||  ||  ||||||| || ||| ||||||||||  || |||||||| ||| |||||||     
T  28342460 aattgttgttgacacattgcataaggctaagacacataagtaatttacgtttttgccccttcggcagttaactgtcgaagaattcaaaaaccggctgcaa 28342559  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  28342560 ttaactgccgagga 28342573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 35493477 - 35493364
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||| |||||||||  | |||||||   |||||| ||||||  |||||||||| || |||||||| |||  |||||||    
T  35493477 aattgttgttgacacattgcataaggttgagacacacgagtaaaatacgcttttgccccctcggtagttaactgccgaggaattcaaaaaccagctgcag 35493378  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  35493377 ttaactgccgagga 35493364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 29093842 - 29093779
Alignment:
Q  256 gcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||   |||||||||||||    
T  29093842 gcagttaactgccgaggatcttctgctacaaatctggcagaagctctctca---attattcatctca 29093779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 43491170 - 43491234
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||| |||||||| || |||||||||||||| |||||||||||||||||||||||    
T  43491170 agttaactgccgagaatcttctgttataaatctggcagaagctctctcatccattattcatctca 43491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 16580482 - 16580552
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaa 230  Q
    |||||||||||||||||| |||||||||||||||||  | ||||||| ||||||||  |||||||||||||    
T  16580482 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacatttttgcctcctcgacagttaa 16580552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 19187366 - 19187285
Alignment:
Q  153 tgaaacaaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 234  Q
    ||||| ||||||||||| | |||| |||||||||||||||||| || |||||||  ||||||| |||||| |||||||||||    
T  19187366 tgaaaaaaattgttgttcagacatatcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgc 19187285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 2648178 - 2648242
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||| ||| || ||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  2648178 agttaattgccgatgatcttctgctacaaatctggcagaaactctctcatcaattattcatctca 2648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 16580559 - 16580611
Alignment:
Q  270 aggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  16580559 aggattttctgctacaaatctggcaaaagttctctcatccattattcatctca 16580611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 39393098 - 39393162
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||  ||||||||||| |||||||||||  ||||| |||||||||||||||||||||||    
T  39393098 agttaactgtcgaggatcttctactacaaatctgatagaagctctctcatccattattcatctca 39393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 24512112 - 24512207
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 263  Q
    ||||||||||||||| |||||||| ||| || |||||||  ||||| | ||||||||||||||||| ||| ||||| || |||  |||||||||||    
T  24512112 ttgacacatttcatatggctgagaaacacaagtaaaatacgtttttaccccctcgacagttaactgttgaggaattaaaaaaccagctgcagttaa 24512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 26858175 - 26858238
Alignment:
Q  259 gttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| |||||||||||||||||||| || |||||  ||||||||| |||||||||||||    
T  26858175 gttaactgccgaggatcttctgctacaaatgtgacagaaattctctcatcaattattcatctca 26858238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 45479931 - 45479856
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 234  Q
    ||||||||||||||||||||||||||||| ||| |||| | |||||||   |||||||| |||| |||||||||||    
T  45479931 aaattgttgttgacacatttcataaggctcagaaacatgagtaaaatacgattttgctctctcggcagttaactgc 45479856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 10365804 - 10365746
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattc 316  Q
    |||||| ||| ||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  10365804 agttaaatgccgaggatcttttgctacaaatctggcataagctctctcatccattattc 10365746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 34921895 - 34921782
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| | ||||||||||||||||||| |||| |||  | |||||||  ||||||| ||| ||  |||||||||| ||  ||||||| ||| |||||||    
T  34921895 aaattgctattgacacatttcataaggcagagaaacacgagtaaaatacgtttttgccccc-cggtagttaactgccgagaaattcaaaaaccggctgca 34921797  T
Q  259 gttaactgctgagga 273  Q
    |||||||||||||||    
T  34921796 gttaactgctgagga 34921782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 28472142 - 28472214
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctg--ctac-aaatctggcagaaggt-ctctcatccattattcatct 320  Q
    |||||||||||||||||||||||||||||  |||| |||||||||||||  | ||||||||||||||||||||    
T  28472142 ggctgcagttaactgctgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattcatct 28472214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 34638212 - 34638262
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||||||||||||||   ||||| |||||||||||||||||||||||    
T  34638212 gaggatcttctgctacaaatct---agaagctctctcatccattattcatctca 34638262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 23409638 - 23409524
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||| ||||| || |||||||||||  ||||  | |||||||    ||||| | |||| ||||||| ||| || |||||||| |||||||||||    
T  23409638 aaattgttgtggacacgttacataaggctgatgcacactagtaaaatacgcgtttgccctctcggcagttaattgccgaggaattcaaaaactggctgca 23409539  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  23409538 gttaactgccgagga 23409524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 43493380 - 43493318
Alignment:
Q  173 acatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgct 235  Q
    ||||| ||||||||||||||||| || |||||||  ||||||| |||||| ||||||||||||    
T  43493380 acattacataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgct 43493318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 273
Target Start/End: Original strand, 41497417 - 41497522
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    |||||||||| |||||||||||| ||||  | |||  ||  |||||||  |||||||| |||||||| || |||||||| ||| |||||||||||| |||    
T  41497417 ttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccacctcgacacttaactgccgaagaattcaaaaaccggctgcagttaattgc 41497516  T
Q  268 tgagga 273  Q
     |||||    
T  41497517 cgagga 41497522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 19469921 - 19470028
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||| |||| |||||| |||||| ||| ||||| || |||||||  |||||  ||| || ||||||||||  ||| |||||||||||| || ||||    
T  19469921 aaattgttcttgatacattttataaggttgacacacacaagtaaaatacgttttttttccttc-acagttaactattgaggaattcaataaccggttgca 19470019  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  19470020 gttaactgc 19470028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 41500370 - 41500263
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| ||||||||||||||||| |||||||| |||  | |||||||   |||||| |||||| |||||||||    | |||||||| | | ||||||||    
T  41500370 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatacgcttttgccccctcggcagttaactatcaaagaattcaaaatccggctgcag 41500271  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  41500270 ttaactgc 41500263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 1101148 - 1101075
Alignment:
Q  200 taaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 273  Q
    ||||||||  ||||||||||||| ||||||||||| ||||||||  | | | ||||| |||||||||| |||||    
T  1101148 taaaatatgattttgctccctcggcagttaactgccgatgaatttgaaatccggctgtagttaactgccgagga 1101075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 9660191 - 9660078
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||||||| ||||| ||||||  |||  | |||  ||  ||||||| | |||| ||||||||||| || |||| ||||||| ||||||||    
T  9660191 aattgctgttgacacattgcataaagctgaggtacacgagtaatttacttttttgccctctcggcagttaactgccgaggaatacaataaccggctgcag 9660092  T
Q  260 ttaactgctgagga 273  Q
    || ||||| |||||    
T  9660091 ttgactgccgagga 9660078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 12905492 - 12905593
Alignment:
Q  166 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 265  Q
    |||||||||||||||||||||||||| |||  | |||||||   ||||   |||||| ||||||||||| ||  |||| || ||  ||||||||||||||    
T  12905492 tgttgacacatttcataaggctgagaaacaagagtaaaatacgcttttttcccctcggcagttaactgccgagaaattgaaaaatcggctgcagttaact 12905591  T
Q  266 gc 267  Q
    ||    
T  12905592 gc 12905593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 25184965 - 25184853
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||| ||| ||||||| |||| ||||  | |||||||  ||||||| |||||  ||||||||||  || |||||  | ||| ||||||||    
T  25184965 aattgttgttgacagattgcataaggttgaggcacacgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaatttga-aaccggctgcag 25184867  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  25184866 ttaactgccgagga 25184853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 159 - 322
Target Start/End: Complemental strand, 34154539 - 34154376
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||||||||| |||    ||||||| |||||||  || ||| ||||||||||| || ||||| || ||| |||||||    
T  34154539 aaattgttgttgacacatttcataaggctgagaaacacgggtaaaatacatttttgtcccatcggcagttaactgccgaggaattaaaaaaccggctgca 34154440  T
Q  259 gttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  34154439 gttaactgcagaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 34154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 160 - 322
Target Start/End: Original strand, 56304814 - 56304975
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||  ||||||| |||||| ||||| |||  | ||||||| |||||||| || ||| ||||||||||  || ||||| || | ||||||||||    
T  56304814 aattgttgttcccacatttgataaggttgagaaacacgagtaaaatacatttttgc-ccatcggcagttaactgtcgaggaattaaaaatctggctgcag 56304912  T
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||| ||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  56304913 ttaattgccgaggattttctgctacaaatctggcagaagctctctcatccattattcatctca 56304975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 29700439 - 29700325
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||   |||||||||||||||||||| |||||||||||| |||||||    
T  29700439 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgtctcctcgacagttaactgctgaggaattcaataaccggctgca 29700340  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  29700339 gttaactgccgagga 29700325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 4768614 - 4768722
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||  |||| || ||||||||| |||||| |||||| ||||||||||| || |||||||| | |||||||||    
T  4768614 aaattgttgttgacacatttcataaggctgatgcacacaagtaaaatataattttgccccctcggcagttaactgccgaggaattcaaaatctggctgca 4768713  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  4768714 gttaactgc 4768722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 34530815 - 34530743
Alignment:
Q  250 ctggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  34530815 ctggctgcagttaactgccgaggatcttctgctacaaatttggcagaagctctctcatccattattcatctca 34530743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 6283512 - 6283417
Alignment:
Q  225 agttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| |  |||||||| ||| |||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  6283512 agttaactgccgcagaattcaaaaaccggctgcagttaactgccgaggatcttctgcttcaaatctggccgaagctctctcatccattattcatct 6283417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 39588078 - 39588191
Alignment:
Q  209 tttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    ||||||| |||||| ||||||||||| || |||||  | |   | |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  39588078 tttttgccccctcggcagttaactgccgaggaattagaaattcgactgcagttaactgccgaggatcttctgctacaaatatggcagaagctctctcatc 39588177  T
Q  309 cattattcatctca 322  Q
    ||||||||||||||    
T  39588178 cattattcatctca 39588191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 56138313 - 56138377
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  56138313 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 56138377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 958730 - 958617
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| ||||||||||||| ||||||||||| ||||||| |||||||  ||||||  | |||||||||||||||| ||||||||||| ||| || ||||    
T  958730 aaattgatgttgacacattttataaggctgaggcacataagtaaaatacgtttttgtcctctcgacagttaactgc-gatgaattcaaaaaccggttgca 958632  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  958631 gttaactgccgagga 958617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 21472621 - 21472507
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||||||||| |||  | |||||||  |||||||  ||||| ||||||||||| || |||||||| ||  |||||||    
T  21472621 aaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccgcctcggcagttaactgccgaggaattcaaaaatcggctgca 21472522  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  21472521 gttaactgccgagga 21472507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 51429347 - 51429277
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  51429347 ggctgcagttaactgtcgaggatcttctgctacaaatctggaagaagctctctcatccattattcatctca 51429277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 273
Target Start/End: Complemental strand, 49573032 - 49572923
Alignment:
Q  164 gttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 263  Q
    |||||||||||||| |||||||||||| |||| || |||||||  ||||||| || ||||||||||||||  || |||||||||||  ||||||||||||    
T  49573032 gttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgccccatcgacagttaactgtcgaggaattcaataatcggctgcagttaa 49572933  T
Q  264 ctgctgagga 273  Q
    |||| |||||    
T  49572932 ctgccgagga 49572923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 44561342 - 44561278
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  44561342 agttaactgccgaggatcgtctgctacaaatctggcagaagctctctcatccattattcatctca 44561278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 37959857 - 37959743
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||| |||||||||||| ||||  | |||||||  ||||| | |||||| |||||||||| ||| ||||| ||||||  ||||||    
T  37959857 aaattgttgttgacacattacataaggctgaggcacacgagtaaaatacgtttttaccccctcggcagttaactgttgaggaatttaataaccagctgca 37959758  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  37959757 gttaactgccgagga 37959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 958606 - 958542
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  958606 agttaactgccgaggatcttctgctacaaatccggcagaagctctctcatccattattcttctca 958542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 42885508 - 42885576
Alignment:
Q  256 gcagttaactgctgaggatcttctgctacaaa--tctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||| || ||||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  42885508 gcagttaactgccgatgatcttctgctacaaaaatctggcagaagctctctcatccattattcatctca 42885576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 38464901 - 38464796
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||||||||||| ||||  |||| | ||||||||  ||||||| ||||||||||||| ||  || |||||| | ||| ||||||||    
T  38464901 aattgttgttgacacatttcataaggttgaggtacatgagtaaaatatgattttgcttcctcgacagttaaatgacgaggaattcga-aaccggctgcag 38464803  T
Q  260 ttaactg 266  Q
    |||||||    
T  38464802 ttaactg 38464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 4980053 - 4979940
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||| |||| ||||  | |||  ||  ||||| |||||||| ||||||||||  || || ||||| ||| ||||||||    
T  4980053 aattgttgttgacacattgcataaggttgaggcacacgagtaatttacgtttttcctccctcggcagttaactgtcgacgatttcaaaaaccggctgcag 4979954  T
Q  260 ttaactgctgagga 273  Q
    ||||||||||||||    
T  4979953 ttaactgctgagga 4979940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 955728 - 955836
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| |||||||||||||||||| | |||| |||| || |||||||  |||||||  | | | |||||||||||||| |||||||| ||  |||||||    
T  955728 aaattgatgttgacacatttcataaagttgaggcacacaagtaaaatacgtttttgcctctttggcagttaactgctgaggaattcaaaaatcggctgca 955827  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  955828 gttaactgc 955836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 319
Target Start/End: Complemental strand, 243359 - 243296
Alignment:
Q  256 gcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatc 319  Q
    |||||||||||  |||||||||||| ||||||||||||||||| |||||||  |||||||||||    
T  243359 gcagttaactgtcgaggatcttctgttacaaatctggcagaagctctctcactcattattcatc 243296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 1041996 - 1042056
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcat 318  Q
    |||||||||| ||||||||||| |||||||||||||| ||| |||||||| |||| |||||    
T  1041996 agttaactgccgaggatcttctactacaaatctggcataagctctctcattcattgttcat 1042056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 28081530 - 28081582
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatct 320  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  28081530 gaggatcttctgctacaaatctggcagaatctcctctcatccattattcatct 28081582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 49422079 - 49422135
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgc 215  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||||||  |||||||    
T  49422079 aaattgttgtttacacatttcataaggctgagtcacacaaataaaatacgtttttgc 49422135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 51426473 - 51426577
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||| |||||||||||| || |||| || |||||||  ||||||  |  ||||||||||||||  || |||||||| ||  |||||||    
T  51426473 aaattgttgttgacacgtttcataaggcttaggcacacaagtaaaatacgtttttgtcctttcgacagttaactgtcgaggaattcaaaaatcggctgca 51426572  T
Q  259 gttaa 263  Q
    |||||    
T  51426573 gttaa 51426577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 4786345 - 4786296
Alignment:
Q  259 gttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    ||||||||| || ||||||||||||||||||||| ||||| |||||||||    
T  4786345 gttaactgccgatgatcttctgctacaaatctggtagaagctctctcatc 4786296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 18581432 - 18581375
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgct 216  Q
    ||||||||||||||||||||||||||| |||| |||| || | ||||||| |||||||    
T  18581432 aaattgttgttgacacatttcataaggttgaggcacacaagttaaatataattttgct 18581375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 44558636 - 44558692
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgc 215  Q
    ||||||||||||||||||| |||||||||||| |||| || ||||||| | ||||||    
T  44558636 aaattgttgttgacacattacataaggctgaggcacacaagtaaaatacacttttgc 44558692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 191
Target Start/End: Complemental strand, 44561467 - 44561435
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgaga 191  Q
    |||||||||||||||||||||||||||||||||    
T  44561467 aaattgttgttgacacatttcataaggctgaga 44561435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 48256700 - 48256653
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    ||||||||||| |||||||||||||||||||| |||| || |||||||    
T  48256700 aaattgttgttcacacatttcataaggctgaggcacacaagtaaaata 48256653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 51644611 - 51644564
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    |||||||||||||||||||| || |||||||| ||||||| |||||||    
T  51644611 aaattgttgttgacacattttattaggctgaggcacataagtaaaata 51644564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 4774714 - 4774645
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagtta 229  Q
    ||||||||||||||||||||||||| ||||||| |||| | |||||||  |||||| |||| || ||||||    
T  4774714 aaattgttgttgacacatttcataa-gctgagaaacatgagtaaaatacgtttttgttcccacggcagtta 4774645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 29700314 - 29700268
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctct 304  Q
    |||||| ||| || ||||||||||||||||||||||||||| |||||    
T  29700314 agttaattgccgatgatcttctgctacaaatctggcagaagctctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 1044615 - 1044542
Alignment:
Q  200 taaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 273  Q
    ||||||||  ||||||||| ||| ||||||||||  ||||||||  | | |||||||||||||||||| |||||    
T  1044615 taaaatatgattttgctccttcggcagttaactgtcgatgaatttgaaatctggctgcagttaactgccgagga 1044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 9472859 - 9472900
Alignment:
Q  224 cagttaactgctgatgaattcaataactggctgcagttaact 265  Q
    |||||||||||||| |||||||  ||||||||||||||||||    
T  9472859 cagttaactgctgaggaattcataaactggctgcagttaact 9472900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 11494481 - 11494593
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||| ||||||||| | |||| ||||| |||  | |||||||  ||||||  |||||| || |||||||  || |||||||| ||| ||||||||    
T  11494481 aattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggcaattaactgtcgaggaattcaa-aaccggctgcag 11494579  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  11494580 ttaactgccgagga 11494593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 3450151 - 3450103
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 207  Q
    |||||| |||||||| |||||||||||||||| |||| || ||||||||    
T  3450151 aaattgctgttgacatatttcataaggctgaggcacacaagtaaaatat 3450103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 11287557 - 11287593
Alignment:
Q  279 tgctacaaatctggcagaaggtctctcatccattatt 315  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  11287557 tgctacaaatgtggcagaagctctctcatccattatt 11287593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 21018018 - 21017951
Alignment:
Q  256 gcagttaactgctgaggatcttctg--ctacaaatctggcagaaggt-ctctcatccattattcatct 320  Q
    |||||||||||| || |||||||||  |||||||||||||||||  | |||||||| |||||||||||    
T  21018018 gcagttaactgccgatgatcttctgagctacaaatctggcagaatctcctctcatctattattcatct 21017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 24417552 - 24417516
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacaca 195  Q
    |||||||||||||||||| |||||| |||||||||||    
T  24417552 aaattgttgttgacacatatcataacgctgagacaca 24417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 287
Target Start/End: Original strand, 37865200 - 37865232
Alignment:
Q  255 tgcagttaactgctgaggatcttctgctacaaa 287  Q
    ||||||||||||| |||||||||||||||||||    
T  37865200 tgcagttaactgccgaggatcttctgctacaaa 37865232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 322
Target Start/End: Complemental strand, 19454461 - 19454299
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||| ||||| ||||||| |||||||||  | |||||||   |||||| | |||| |||||||||||||| |||||||| ||  || |||||    
T  19454461 aattgttgttgatacattgcataaggttgagacacacgagtaaaatacgcttttgccctctcggcagttaactgctgaggaattcaaaaatcggttgcag 19454362  T
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  19454361 ttaactgccgaggatcttctactacaaatctggcagaagctctctcatccattattcatctca 19454299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 29929362 - 29929476
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||  |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  29929362 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgca 29929461  T
Q  259 gttaactgctgagga 273  Q
     |||||||| |||||    
T  29929462 attaactgccgagga 29929476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 29978516 - 29978630
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| ||||||||||| |||| || ||||||||  |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  29978516 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatatgattttgctccctcgacagttaactgttgaggaattcaaaaaccggctgca 29978615  T
Q  259 gttaactgctgagga 273  Q
     |||||||| |||||    
T  29978616 attaactgccgagga 29978630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 28611237 - 28611123
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||| || ||||||||||||||||||||||||| || ||||||||| |||||| |||||| ||||||||||| ||  ||||||| ||| |||||||    
T  28611237 aaattgttctttacacatttcataaggctgagacacacaagtaaaatataattttgccccctcggcagttaactgccgagaaattcaaaaaccggctgca 28611138  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  28611137 gttaactgccgagga 28611123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 41579860 - 41579747
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||| || |||||||||||| ||||||| |||||||   |||| | |||||| ||||||| |||||| |||||||||||| ||||||||    
T  41579860 aattgttgttgacacgttgcataaggctgaggcacataagtaaaatacgatttttccccctcggcagttaattgctgaggaattcaataaccggctgcag 41579761  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41579760 ttaactgccgagga 41579747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 34694446 - 34694382
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34694446 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 34694382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 7247996 - 7247890
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||  ||||||||||| ||||  |||||||||   |||||| |||||| ||||||||||| || |||||||||||| ||||||||    
T  7247996 aattgttgttgacacattggataaggctgaggcacacgaataaaatacgcttttgccccctcggcagttaactgccgaggaattcaataaccggctgcag 7247897  T
Q  260 ttaactg 266  Q
    |||||||    
T  7247896 ttaactg 7247890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 55207675 - 55207613
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  55207675 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 55207613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 43568927 - 43568991
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||    
T  43568927 agttaactgctgaggatcttctgttacaaatctgacagaagctctctcatccattattcatctca 43568991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 51696586 - 51696522
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  51696586 agttaactgccgaggatcttctgctgcaaatctggcagaagctctctcatccattattcatctca 51696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 41803059 - 41803121
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  41803059 agttaactgccgaggatcttttgctacaaatctggcagaagctctctcatccattattcatct 41803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 51402410 - 51402348
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  51402410 agttaactgccgaggatcttctgctacaaatctgtcagaagctctctcatccattattcatct 51402348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 45101985 - 45101872
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||| |||||||||||||||| |||| ||||||| |||||||  |||||   |||||| ||||||| || ||| |||||||| ||| |||||||    
T  45101985 aaattgttgtcgacacatttcataaggttgaggcacataagtaaaatacgtttttatcccctcggcagttaattgttgaggaattcaaaaaccggctgca 45101886  T
Q  259 gttaactgctgagg 272  Q
    ||||||||| ||||    
T  45101885 gttaactgccgagg 45101872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 43476253 - 43476317
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  43476253 agttaactgccgaggatcttttgctacaaatctgacagaagctctctcatccattattcatctca 43476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 43571822 - 43571714
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||| ||||||| | ||  ||| || |||||||| ||||||| |||||| |||||||||||||| |||||||| |   |||||||    
T  43571822 aaattgttgttgacacattacataaggttcaggtacacaagtaaaatatgtttttgccccctcggcagttaactgctgaggaattcaaaagtcggctgca 43571723  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  43571722 gttaactgc 43571714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 45101860 - 45101796
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  45101860 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatatattattcatctca 45101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 55385198 - 55385262
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  55385198 agttaactgtcgaggatcttctgctacaaatctggcagaagctctctcatccattattaatctca 55385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 7245155 - 7245217
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  7245155 ttaactgccgagtatcttctgctacaaatctgacagaagctctctcatccattattcatctca 7245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 29918478 - 29918364
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||   |||||  |||||| || |||||||| ||  ||||| | ||| |||||||    
T  29918478 aaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgca 29918379  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  29918378 gttaactgccgagga 29918364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 29967631 - 29967517
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||   |||||  |||||| || |||||||| ||  ||||| | ||| |||||||    
T  29967631 aaattgttgttgacatatttcataaggctgaggcacataagtaaaatacgattttggcccctcggcaattaactgccgaataattcgaaaaccggctgca 29967532  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  29967531 gttaactgccgagga 29967517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 41137780 - 41137829
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcat 318  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41137780 gaggatcttctgctacaaatctggcagaagctctctcatccattattcat 41137829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 42804398 - 42804499
Alignment:
Q  166 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 265  Q
    ||||||||||||||||||||||||| |||| || ||||||| | ||| || ||||||| |||||||||| || ||||| || |||| | |||||||||||    
T  42804398 tgttgacacatttcataaggctgaggcacacaagtaaaatacactttagccccctcgatagttaactgccgaggaattaaaaaactagttgcagttaact 42804497  T
Q  266 gc 267  Q
    ||    
T  42804498 gc 42804499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 13896888 - 13896824
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| || ||| |||| |||||||||||||||||| |||||||||||||||||||||||    
T  13896888 agttaactgccgaagattttctactacaaatctggcagaagctctctcatccattattcatctca 13896824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 41577140 - 41577200
Alignment:
Q  262 aactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  41577140 aactgccgaggatcttctgctacaaatcttgcagaagctctctcatccattatccatctca 41577200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 52570578 - 52570514
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||||| |||||||||||||||||  |||||||| ||||||||||||||    
T  52570578 agttaactgccgaggatcttctactacaaatctggcagaaactctctcattcattattcatctca 52570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 263
Target Start/End: Original strand, 55267378 - 55267481
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||| || |||||||||||||||||  | |||  ||  ||||||| |||||||||||||||||| || |||||||| ||  ||||||||    
T  55267378 aattgttgttgacacgttgcataaggctgagacacacgagtaatttacgtttttgccccctcgacagttaactgccgaagaattcaaaaatcggctgcag 55267477  T
Q  260 ttaa 263  Q
    ||||    
T  55267478 ttaa 55267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 66841 - 66942
Alignment:
Q  163 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 262  Q
    |||||||||||||||| ||||||||||||||||  | |||||||   |||||| |||||| ||||||||||| || | |||||| ||| |||||||||||    
T  66841 tgttgttgacacatttgataaggctgagacacacgagtaaaatacgcttttgccccctcggcagttaactgccgaggtattcaa-aaccggctgcagtta 66939  T
Q  263 act 265  Q
    |||    
T  66940 act 66942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 266
Target Start/End: Complemental strand, 13897004 - 13896906
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 266  Q
    |||| ||||| ||||||||| |||||||  | |||||||| ||||||   ||||| ||||||| |||||| ||||| ||||||||||||||||||||||    
T  13897004 ttgatacattgcataaggctaagacacacgagtaaaatatgtttttgactcctcggcagttaattgctgaagaatttaataactggctgcagttaactg 13896906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 30256140 - 30256026
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||| |||||| |||| || ||||||| ||   ||| |||| |  |||||||||| || ||||| || ||| |||||||    
T  30256140 aaattgttgttgacacatttcataaagctgaggcacacaagtaaaatacataaatgcccccttggtagttaactgccgaggaattaaaaaaccggctgca 30256041  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  30256040 gttaactgccgagga 30256026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 41577012 - 41577118
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||  |||||||    ||||||||||||||  |||||||| || ||  || |||||    
T  41577012 aattgttgttgacacatttcataaggctgagaaatacaaataaaatacgtttttgccttttcgacagttaactgtcgatgaattaaaaaatcggttgcag 41577111  T
Q  260 ttaactg 266  Q
    |||||||    
T  41577112 ttaactg 41577118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 42807737 - 42807663
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    ||||||||||| |||||||||||||||||||  |||| |||||||||| ||||||||  ||||| ||||||||||    
T  42807737 aaattgttgttaacacatttcataaggctgatgcacacaaataaaatacatttttgcctcctcggcagttaactg 42807663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 2271325 - 2271260
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||||||||||| ||||||||||    
T  2271325 agttaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccataattcatctca 2271260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 311
Target Start/End: Complemental strand, 24703427 - 24703374
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccat 311  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  24703427 agttaactgccgatgatcttctgctacaaatctggcagaagctctctcatccat 24703374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 34648218 - 34648150
Alignment:
Q  256 gcagttaactgctgaggatcttctgctacaaa--tctggcagaaggtctctcatccattattcatctca 322  Q
    ||||| || ||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||    
T  34648218 gcagtaaattgctgaggatcttatgctacaaaattctggcagaagctctctcatccattattcatctca 34648150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 36134384 - 36134449
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||  | |||| |||||||||||||||||    
T  36134384 agttaactgccgaggatcttctgctacaaatctggcagaatctcctcttatccattattcatctca 36134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 46344874 - 46344987
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||| |||  |||||| |||| |||| || |||||||| ||||||| |||||| ||||||||||  || |||||||| ||  ||||||||    
T  46344874 aattgatgttgacaaattggataaggttgaggcacacaagtaaaatatttttttgccccctcggcagttaactgtcgaggaattcaaaaatcggctgcag 46344973  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  46344974 ttaactgccgagga 46344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 49609444 - 49609508
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||| |||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  49609444 agttaactgccgaggaacttctgctacaaatctggcataagctctcttattcattattcatctca 49609508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 4004813 - 4004750
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||| ||||||||||||||||||| |||||||||  | ||||||||||||||||||||||    
T  4004813 ttaactgccgaggatcttctgctacaaacctggcagaatctcctctcatccattattcatctca 4004750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 55207799 - 55207692
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| ||||||||||||||||| |||||||| |||  | |||||||   |||||| || ||| ||||||||||| || |||||||| ||| || |||||    
T  55207799 aattgatgttgacacatttcatatggctgagaaacacgagtaaaatactcttttgccccatcggcagttaactgccgaagaattcaaaaaccggttgcag 55207700  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  55207699 ttaactgc 55207692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 19440192 - 19440306
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| |||||| ||||| ||||| |||||| ||||  | ||||||| | ||||||  ||||| ||||||||||| || |||||||  ||| |||||||    
T  19440192 aaattgctgttgatacattgcataaagctgaggcacacgagtaaaataaacttttgcctcctcggcagttaactgccgaagaattcataaaccggctgca 19440291  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  19440292 gttaactgccgagga 19440306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 273
Target Start/End: Original strand, 41802939 - 41803048
Alignment:
Q  164 gttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaa 263  Q
    ||||| ||||||||||||| |||||||| | |  | |||||||  ||||||| | |||| ||||||||||| || ||||| || ||| ||||||||||||    
T  41802939 gttgtcgacacatttcatatggctgagaaatacgagtaaaatacgtttttgcccactcggcagttaactgccgaagaatttaaaaaccggctgcagttaa 41803038  T
Q  264 ctgctgagga 273  Q
    |||| |||||    
T  41803039 ctgccgagga 41803048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 49219792 - 49219739
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||||    
T  49219792 gaggatcttctgctacaaatttgacagaagctctcccatccattattcatctca 49219739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 52570701 - 52570597
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||| ||||||||||| |||||||||||| ||||  | |||||||  ||||| | |||||| ||||||||||| || |||||||| ||| | ||||||    
T  52570701 aattgtcgttgacacattgcataaggctgaggcacacgattaaaatacgttttttc-ccctcggcagttaactgccgaagaattcaaaaaccgactgcag 52570603  T
Q  260 ttaact 265  Q
    ||||||    
T  52570602 ttaact 52570597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 2426559 - 2426609
Alignment:
Q  272 gatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||| |||| ||||||||| |||||||| ||||||||||||||    
T  2426559 gatcttctgctataaatttggcagaagctctctcattcattattcatctca 2426609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 2433079 - 2432973
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| ||||  | |||||||   ||||   |||||| ||||||||||  || |||||||||||| || | |||    
T  2433079 aattgttgttgacacattgcataaggctgaggcacacgagtaaaatacgcttttatcccctcggcagttaactgtcgaggaattcaataaccggatacag 2432980  T
Q  260 ttaactg 266  Q
    |||||||    
T  2432979 ttaactg 2432973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 7837529 - 7837599
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaa 230  Q
    |||||||||||||||||| ||||||||||||||||| || |||  ||  ||||| | ||||||||||||||    
T  7837529 aattgttgttgacacattgcataaggctgagacacacaagtaatttaagttttttccccctcgacagttaa 7837599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 11380378 - 11380492
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||||  | ||||||||| |||  | |||||||  ||||||| || ||| ||||||||||| || ||||| || |  ||| |||||    
T  11380378 aattgttgttgacacatttggttaggctgagaaacacgagtaaaatacgtttttgccccttcggcagttaactgccgaggaattaaaaatatggttgcag 11380477  T
Q  260 ttaactgctgaggat 274  Q
    |||||||| ||||||    
T  11380478 ttaactgccgaggat 11380492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 41805811 - 41805698
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||| ||||||||| |||||||||||| |||| || |||  ||  |||||||| ||||| ||||||||||  || ||||| ||  || |||||||     
T  41805811 aattgttgatgacacattgcataaggctgaggcacacaagtaatttacgtttttgcttcctcggcagttaactgtcgaagaatttaaagaccggctgcaa 41805712  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41805711 ttaactgccgagga 41805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 48251005 - 48250892
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||  |||||| ||||||| || | ||||||||||||  |  ||||||| |||||| |||||||||||||| |||||  |   | ||||||||    
T  48251005 aattgttgttcccacattacataaggttgtgccacataaataaatgacgtttttgccccctcggcagttaactgctgaggaatttgaattccggctgcag 48250906  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  48250905 ttaactgccgagga 48250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 42756097 - 42756209
Alignment:
Q  161 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 260  Q
    |||||||||||||||||| |||||| | ||| |||| | |||||||  ||||||| |||||  ||||||||||  || ||||| || | | || ||||||    
T  42756097 attgttgttgacacatttgataaggttcagaaacatgagtaaaatacgtttttgccccctcagcagttaactgtcgaggaattaaaaatccggttgcagt 42756196  T
Q  261 taactgctgagga 273  Q
    ||||||| |||||    
T  42756197 taactgccgagga 42756209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 46402411 - 46402483
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctg--ctac-aaatctggcagaaggt-ctctcatccattattcatct 320  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||||||  | ||||||||||||||| ||||    
T  46402411 ggctgcagttaactgccgaggatcttctgcactacaaaatctggcagaatctcctctcatccattattgatct 46402483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 43568862 - 43568894
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgaga 191  Q
    |||||||||||||||||||| ||||||||||||    
T  43568862 aaattgttgttgacacattttataaggctgaga 43568894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 48246354 - 48246426
Alignment:
Q  165 ttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctga 237  Q
    ||||| |||||||| ||||||||||| || |  | ||||  |||||||||| |||||| ||||||||||||||    
T  48246354 ttgtttacacatttgataaggctgagtcatacgagtaaatgatatttttgccccctcggcagttaactgctga 48246426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 159 - 322
Target Start/End: Original strand, 3395828 - 3395991
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| | |||||||||||||||||| |||| |||| || |||||||| ||||||| |||||  ||||||||||| || ||||| || || ||  ||||    
T  3395828 aaattgctcttgacacatttcataaggttgaggcacacaagtaaaatatgtttttgccccctcagcagttaactgccgaggaatttaaaaattgattgca 3395927  T
Q  259 gttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  3395928 gttaactgccgaggatcttctgctacaaatatggcagaaactctctcatccattattcatctca 3395991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 7168024 - 7168138
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| |||||||| |||| |||| || |||||||| ||| |||||||    
T  7168024 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccctcgactgttagctgccgaagaattcaaaaaccggctgca 7168123  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  7168124 gttaactgccgagga 7168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 18441577 - 18441470
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||||||||||||||||||||| || |||||||  ||||||| |||||| ||||||||||| ||  ||||||||||| |  || ||    
T  18441577 aattgttgttgacacatttcataaggctgagacacacaagtaaaatacgtttttgccccctcggcagttaactgccgagaaattcaataaccgattgtag 18441478  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  18441477 ttaactgc 18441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 18441455 - 18441389
Alignment:
Q  256 gcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  18441455 gcagttaactgccgaggatcttctgctacaaatctggcagaaactctctcatccattattcatctca 18441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 18438571 - 18438684
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||  |||| || |||||||   |||||| || ||| |||||||||| ||| |||||||||||| ||||||||    
T  18438571 aattgttgttgacacattgcataaggctgatgcacacaagtaaaatacgcttttgccccttcggcagttaactgttgaggaattcaataaccggctgcag 18438670  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  18438671 ttaactgccgagga 18438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 41858257 - 41858144
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||||||| |||||||| |||  | |||||||  ||||||| |||||| ||||||||||  || |||||||| ||| ||||||||    
T  41858257 aattgttgttgacacatttcatatggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactggcgaagaattcaaaaaccggctgcag 41858158  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41858157 ttaactgccgagga 41858144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 22547498 - 22547568
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  22547498 ggctgcagttaactaccgaggatcttctactacaaatctggcagaagctctctcatcaattattcatctca 22547568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 41858135 - 41858073
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41858135 agttaactgtcgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 41858073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 26451541 - 26451601
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcat 318  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26451541 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatctattattcat 26451601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 273
Target Start/End: Original strand, 41855306 - 41855418
Alignment:
Q  161 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 260  Q
    |||||||||||||||||||||| |||||||| |||| | |||||||  |||||||  ||||| ||||||||||  || |||||||| ||  |||||||||    
T  41855306 attgttgttgacacatttcatatggctgagaaacatgagtaaaatacgtttttgcctcctcggcagttaactgtcgaagaattcaaaaatcggctgcagt 41855405  T
Q  261 taactgctgagga 273  Q
    ||||||| |||||    
T  41855406 taactgccgagga 41855418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 266
Target Start/End: Original strand, 22577601 - 22577708
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||| |||||||| |||||||| ||||| || ||||| ||||||||||  |||||| ||||||| ||||||| |||||| |||||||| || ||| ||||    
T  22577601 aaatcgttgttgatacatttcacaaggcagatacacacaaataaaatacgtttttgttccctcggcagttaattgctgaggaattcaaaaattggttgca 22577700  T
Q  259 gttaactg 266  Q
    ||||||||    
T  22577701 gttaactg 22577708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 41274653 - 41274717
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  41274653 agttaactgccgagaatcttctactataaatctggcagaagctctctcatccattattcatctca 41274717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 273
Target Start/End: Original strand, 42602400 - 42602510
Alignment:
Q  163 tgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 262  Q
    |||||||||||| ||||||| |||||||| |||  | ||||||| ||||||| ||  ||| ||||||||||| || |||||||| ||| || ||||||||    
T  42602400 tgttgttgacacgtttcatatggctgagaaacacgagtaaaatacatttttgttctatcggcagttaactgccgaagaattcaaaaaccggatgcagtta 42602499  T
Q  263 actgctgagga 273  Q
    ||||| |||||    
T  42602500 actgccgagga 42602510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 320
Target Start/End: Original strand, 37779707 - 37779773
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||||||||  |||||| |||||||||||||||| ||||||  ||||||||||||||||||||    
T  37779707 ggctgcagttaactgtcgaggatattctgctacaaatctgacagaag--ctctcatccattattcatct 37779773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 38873066 - 38872953
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||  |||||||| |||||||||||  |||| || ||||| |||||||||  |||||| ||||||||| | || ||||| || ||| ||||||||    
T  38873066 aattgttgacgacacattgcataaggctgatgcacacaagtaaaaaatatttttgtcccctcgtcagttaactaccgaggaatttaaaaaccggctgcag 38872967  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  38872966 ttaactgccgagga 38872953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 308
Target Start/End: Original strand, 38871741 - 38871884
Alignment:
Q  165 ttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaac 264  Q
    ||||||||||||||||||||  |||| |||| || |||||||  |||||||| | | |  |||||| ||  || |||||||  ||  |  ||||||||||    
T  38871741 ttgttgacacatttcataagattgaggcacacaagtaaaatacgtttttgcttcattggtagttaattgtcgaggaattcataaatcgattgcagttaac 38871840  T
Q  265 tgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    |||  |||||||||||||||||||||||||| || |||||||||    
T  38871841 tgccaaggatcttctgctacaaatctggcaggagctctctcatc 38871884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 42602521 - 42602583
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| |||||||||||| |||||||||| || ||| | |||||||||||||||||||    
T  42602521 agttaactgccgaggatcttctgatacaaatctgacataagttgtctcatccattattcatct 42602583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 35389445 - 35389558
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||||||||||| |  | |||  ||  |||||||  | ||||||||||||||| ||  ||||||| |||  |||||||    
T  35389445 aattgttgttgacacattgcataaggctgagacatacgagtaatttacgtttttgcctcttcgacagttaactgccgagaaattcaaaaaccagctgcag 35389544  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  35389545 ttaactgccgagga 35389558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 35940408 - 35940489
Alignment:
Q  192 cacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 273  Q
    ||||||||||||||| ||||||||  | ||||||| ||| |||||| |||||||||||   ||||||||||||||| |||||    
T  35940408 cacataaataaaatacatttttgcctcttcgacagctaagtgctgaggaattcaataatcagctgcagttaactgccgagga 35940489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 24860448 - 24860507
Alignment:
Q  263 actgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||| ||||||||||||||| |||| || |||||| ||||||||| |||||||||||||    
T  24860448 actgcggaggatcttctgctataaatttgacagaagctctctcatctattattcatctca 24860507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 5300684 - 5300756
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaact 232  Q
    ||||||||||||||||||| |||||| ||||| |||  | |||||||  ||||||  ||||||||||||||||    
T  5300684 aattgttgttgacacatttgataaggttgagaaacacgagtaaaatacgtttttgtcccctcgacagttaact 5300756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 39751011 - 39751123
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||||||| ||||| | |||| ||||  | |||||||  ||||||| |||| | || |||||||| ||||||||  | ||| ||||||||    
T  39751011 aattgctgttgacacattgcataatgttgaggcacacgagtaaaatacgtttttgcccccttggcaattaactgccgatgaatttga-aaccggctgcag 39751109  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  39751110 ttaactgccgagga 39751123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 40077386 - 40077325
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctc 221  Q
    ||||||||||||||||||| |||||||||||| |||  | |||||||  ||||||| |||||    
T  40077386 aattgttgttgacacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctc 40077325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Original strand, 51341 - 51369
Alignment:
Q  159 aaattgttgttgacacatttcataaggct 187  Q
    |||||||||||||||||||||||||||||    
T  51341 aaattgttgttgacacatttcataaggct 51369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 195
Target Start/End: Original strand, 4866371 - 4866407
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacaca 195  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  4866371 aaattgttgttcacacatatcataaggctgagacaca 4866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 267
Target Start/End: Original strand, 18205738 - 18205830
Alignment:
Q  175 atttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    |||| |||||||||||| |||  | |||||||  ||||| |  ||||| | ||||||||| || |||||||| ||| ||||||||||||||||    
T  18205738 attttataaggctgagaaacacgagtaaaatacgtttttaccacctcggcggttaactgccgaagaattcaaaaaccggctgcagttaactgc 18205830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 43690162 - 43690086
Alignment:
Q  167 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 243  Q
    |||||||||||||||||||||||   | | || |||||||  ||||||||| ||||  |||||||| ||||||||||    
T  43690162 gttgacacatttcataaggctgaagtatacaagtaaaatacgtttttgctctctcggtagttaactactgatgaatt 43690086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 3603284 - 3603179
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||  |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  3603284 aattgttgttgacacattgcataaggctgaggcacataagtaaaatacgtttttgctccctcgacagttaactgccgaagaattcaataactggctgcag 3603185  T
Q  260 ttaact 265  Q
    ||||||    
T  3603184 ttaact 3603179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 168 - 320
Target Start/End: Complemental strand, 42865906 - 42865754
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    ||||||||||||||| |||| | | |||  | |||||||  ||||| |||||||| |||||||| |  || |||||||| ||| || ||||||||| |||    
T  42865906 ttgacacatttcatatggcttaaaaacacgagtaaaataagttttttctccctcggcagttaaccgacgaagaattcaaaaaccggttgcagttaattgc 42865807  T
Q  268 tgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42865806 cgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 42865754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 159 - 264
Target Start/End: Original strand, 1398540 - 1398645
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||||| | ||||||||| ||||||||||||||| || |||||||||||| || ||||    
T  1398540 aaattgttgttgacacattacataaggttgagacacagaagtaaaatacacttttgctccttcgacagttaactgccgaggaattcaataaccggttgca 1398639  T
Q  259 gttaac 264  Q
    ||||||    
T  1398640 gttaac 1398645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 20192290 - 20192403
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||   |||||| || ||| |||||||||||||| |||||||||||  ||||||||    
T  20192290 aattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgattttgccccttcgtcagttaactgctgaagaattcaataatcggctgcag 20192389  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  20192390 ttaactgccgagga 20192403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 542802 - 542738
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  542802 agttaactgccgaggatcttctgctacaaatctggcagaagttctctcatccattattcatctca 542738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 34682193 - 34682307
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||||||||   || || |||||||   ||||||||||| ||||||||||||  || |||||||| ||| |||||||    
T  34682193 aaattgttgttgacacatttcataaggctgaggttcacaagtaaaatacgcttttgctcccttgacagttaactgtcgaggaattcaaaaaccggctgca 34682292  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  34682293 gttaactgccgagga 34682307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 18307315 - 18307379
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  18307315 agttaactgccgaggatcttctgctacaaatctggcagaagccctctcatccattattcatctca 18307379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 35564322 - 35564386
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  35564322 agttaactgctgaggatcttctgctacaaatctggcataagctctctcatccattattcacctca 35564386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 18538472 - 18538358
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||| |||||||| |||| || |||||||   |||||| |||||| ||||||| ||  || |||||||| ||| |||||||    
T  18538472 aaattgttgttgacacatttcattaggctgaggcacacaagtaaaatacgattttgccccctcggcagttaattgtcgaggaattcaaaaaccggctgca 18538373  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  18538372 gttaactgccgagga 18538358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 19228783 - 19228675
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||  |   ||| |||||| ||||||||||| |||||||| || ||| || ||||    
T  19228783 aaattgttgttgacacatttgataaggctgagacacacaagtaaaatacgtaaatgccccctcggcagttaactgccgatgaattaaaaaaccggatgca 19228684  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  19228683 gttaactgc 19228675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 25497572 - 25497636
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  25497572 agttaactgccgagaatcttctgctacaaatcaggcagaagctctctcatccattattcatctca 25497636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 18310157 - 18310050
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| |||| || |||||||  |||||||  ||||  ||||||||||  || |||||||||||| | ||||||    
T  18310157 aattgttgttgacacattgcataaggctgaggcacacaagtaaaatacgtttttgcctcctcagcagttaactgtcgaggaattcaataaccgactgcag 18310058  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  18310057 ttaactgc 18310050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 20200284 - 20200171
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||||  ||||||| || ||| ||||||||||   |  |||||||||||   ||||||    
T  20200284 aattgttgttgacacattgcataaggctgaggcacacaaataaaatacgtttttgccccatcggcagttaactgtcaagaaattcaataaccaactgcag 20200185  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  20200184 ttaactgccgagga 20200171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 3600273 - 3600381
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt-caataactggctgca 258  Q
    |||||||||||||||||||||||| | |||| |||| || |||||||| ||||||| |||||| ||||||||||| ||  ||||  ||||||  ||||||    
T  3600273 aattgttgttgacacatttcataaagttgagccacacaagtaaaatatgtttttgccccctcggcagttaactgccgaataattataataaccagctgca 3600372  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  3600373 gttaactgc 3600381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 24053116 - 24053224
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||| | ||||||  |||||||||||||||||||  |||||| || |||| ||||||| ||| ||  ||||||| ||| | |||||    
T  24053116 aaattgttgttgacacatatgataaggtcgagacacataaataaaatacgtttttgttctctcggcagttaaatgccgagtaattcaaaaaccgtctgca 24053215  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  24053216 gttaactgc 24053224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 11346068 - 11346133
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||  |||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  11346068 agttaactgtcgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 11346133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 3600398 - 3600462
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||| || ||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||    
T  3600398 agttaacagccgaggatcttctgctacaaatctgacagaagttctttcatgcattattcatctca 3600462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 8702284 - 8702221
Alignment:
Q  210 ttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgagga 273  Q
    ||||||||||||||||||||||||| || ||||| || | ||| ||||||||||||||||||||    
T  8702284 ttttgctccctcgacagttaactgccgaggaattaaaaatctgactgcagttaactgctgagga 8702221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 20192414 - 20192464
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||||||    
T  20192414 agttaaatgccgaggatcttctgctacaaatctggcagaagctctctcatc 20192464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 35567156 - 35567090
Alignment:
Q  167 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    ||||||||||||||| |||||||| |||| || |||||||| ||||||||| |||| ||||||||||    
T  35567156 gttgacacatttcatcaggctgaggcacacaagtaaaatatgtttttgctctctcggcagttaactg 35567090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 8537226 - 8537291
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||| |||||| |||||||||||||||| |||||  | ||||||||||||||||||||||    
T  8537226 agttaactgccgaggatgttctgctacaaatctgccagaatctcctctcatccattattcatctca 8537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 1401478 - 1401435
Alignment:
Q  163 tgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  1401478 tgttgttgacacatttcataaggctgagacacacaagtaaaata 1401435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 512875 - 512793
Alignment:
Q  161 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 243  Q
    |||||||||||||||||| |||||| ||| | ||| || |||| ||  |||||||  ||||||||||||||||| ||||||||    
T  512875 attgttgttgacacatttgataaggttgataaacacaagtaaagtacgtttttgcctcctcgacagttaactgccgatgaatt 512793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 42537138 - 42537212
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 234  Q
    |||||||||| |||||||| |||||||||||| |||  | ||||||| |||||||| || ||| |||||||||||    
T  42537138 aattgttgttcacacatttgataaggctgagaaacacgagtaaaatacatttttgccccatcggcagttaactgc 42537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 1401428 - 1401388
Alignment:
Q  282 tacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  1401428 tacaaatctagcagaagctctctcatccattattcatctca 1401388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 24049973 - 24050021
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 207  Q
    |||||||||||||||||| | ||||||  ||||||||||||||||||||    
T  24049973 aaattgttgttgacacatatgataaggtcgagacacataaataaaatat 24050021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 33993216 - 33993324
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| | |||||||||||||||||| ||||| | |  | |||||||  ||||||| ||||||  |||||||||| ||  ||||||| ||| ||||| |    
T  33993216 aaattgcttttgacacatttcataaggttgagaaatacgagtaaaatacgtttttgccccctcggaagttaactgccgaaaaattcaaaaaccggctgta 33993315  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  33993316 gttaactgc 33993324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 273
Target Start/End: Complemental strand, 33995282 - 33995171
Alignment:
Q  162 ttgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtt 261  Q
    |||||||||||| |||| |||||| |||| |||| || ||||||| | ||||   |||||||||||||||||| ||  ||||||| ||  || |||| ||    
T  33995282 ttgttgttgacatattttataaggttgaggcacacaagtaaaatacaattttatcccctcgacagttaactgccgagaaattcaaaaatcggatgcaatt 33995183  T
Q  262 aactgctgagga 273  Q
    |||||| |||||    
T  33995182 aactgccgagga 33995171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 39743284 - 39743201
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 243  Q
    ||||||||||  ||||||| ||||||||| | ||||  | ||||||||  |||||| |||||||||||||||||| || |||||    
T  39743284 aattgttgttcccacatttgataaggctgtgccacactagtaaaatatgattttgccccctcgacagttaactgccgaggaatt 39743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 273
Target Start/End: Original strand, 41201675 - 41201778
Alignment:
Q  170 gacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctg 269  Q
    |||||||| |||||||||||| ||||  | |||||||   |||||  | ||||||| |||| ||  || |||||||||||| |||||||||||||||| |    
T  41201675 gacacattacataaggctgaggcacacgagtaaaatacgattttgtcctctcgacaattaattgtcgaggaattcaataaccggctgcagttaactgccg 41201774  T
Q  270 agga 273  Q
    ||||    
T  41201775 agga 41201778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 41799903 - 41799796
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||  ||||||| ||||| ||| ||||||  | |||  ||  ||||||| ||||||||||||||||||||| |||||  | | || |||||||    
T  41799903 aattgttgttcccacatttgataagactgtgacacacgagtaatttacttttttgccccctcgacagttaactgctgaggaattagaaatctagctgcag 41799804  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  41799803 ttaactgc 41799796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 38968039 - 38968145
Alignment:
Q  167 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 266  Q
    ||||| ||||||||||||||||| | |||||| |||||||  |||||| ||| |||  |||||||| | || ||||  || | | |||||||||||||||    
T  38968039 gttgatacatttcataaggctgaaaaacataagtaaaatacgtttttgatccttcggtagttaactaccgaggaataaaaaatccggctgcagttaactg 38968138  T
Q  267 ctgagga 273  Q
    | |||||    
T  38968139 ccgagga 38968145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 25500026 - 25499910
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagac--acataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctg 256  Q
    |||||| |||||||||||| |||||||||||| |  ||| || |||||||   |||||| |||||| |||||||||   || |||||||| ||| || ||    
T  25500026 aaattggtgttgacacattacataaggctgaggcgaacacaagtaaaatacgcttttgccccctcggcagttaactatcgaggaattcaaaaaccggttg 25499927  T
Q  257 cagttaactgctgagga 273  Q
    | ||||||||| |||||    
T  25499926 cggttaactgccgagga 25499910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 1397487 - 1397379
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||  ||||||| |||||| || | ||||  | |||  || |||||||| |||||| |||||||||||||| |||||  | | | |||||||    
T  1397487 aaattgttgttcccacatttgataaggttgtggcacacgagtaatttacatttttgccccctcggcagttaactgctgaggaattagaaatccggctgca 1397388  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  1397387 gttaactgc 1397379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 4e-35; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 21188473 - 21188374
Alignment:
Q  223 acagttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21188473 acagttaactgccgaggaattcaaaaaccggctgcagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 21188374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 9494943 - 9494829
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||  | | ||| |||||| ||||||||||| || ||||| || ||| |||||||    
T  9494943 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaataggtatatgccccctcggcagttaactgccgaggaattaaaaaaccggctgca 9494844  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  9494843 gttaactgccgagga 9494829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 30355251 - 30355189
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  30355251 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 30355189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 48316394 - 48316296
Alignment:
Q  162 ttgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagt 260  Q
    ||||||||| |||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||||||| || || ||||||||| |||||||||    
T  48316394 ttgttgttggcacatttcataaggctgagacacacaagtaaaataagtttttgcccccttgacagttaactgccgaagacttcaataaccggctgcagt 48316296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 48314611 - 48314715
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||| ||||  ||| || ||||||| |||||||| |||||| ||||||||||| || |||||||||||| ||||||||    
T  48314611 aattgttgttgacacattgcataaggttgaggtacacaagtaaaatacatttttgc-ccctcggcagttaactgccgaggaattcaataaccggctgcag 48314709  T
Q  260 ttaact 265  Q
    ||||||    
T  48314710 ttaact 48314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 21185556 - 21185663
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||| | |||||||||||| |||||||   ||||||  ||||| ||||||||||| || |||||||||||| ||||| ||    
T  21185556 aattgttgttgacacattgcataatgatgagacacataagtaaaatacgattttgcctcctcggcagttaactgccgaagaattcaataaccggctgtag 21185655  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  21185656 ttaactgc 21185663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 34139926 - 34139996
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||| ||||| |||||||||||||||||    
T  34139926 ggctgcagttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 34139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 322
Target Start/End: Original strand, 48269618 - 48269766
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||| ||||||||||| |||| || |||||||| ||||| | | |||| ||||||||||| || ||||||||||||             
T  48269618 aattgttgttgacacattttataaggctgaggcacacaagtaaaatatgttttt-ccctctcggcagttaactgccgaagaattcaataac--------- 48269707  T
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
        | || ||||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  48269708 ----cggccgaggatcttctgctacaaatctgacaaaagttctctcatccattattcatctca 48269766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 36392062 - 36392175
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||||| || |||| || |||||||  ||||||| ||||||||||||||||| ||| |||||||| ||  || ||| |    
T  36392062 aattgttgttgacacattacataaggcttaggcacacaagtaaaatacgtttttgccccctcgacagttaactgttgaggaattcaaaaatcggttgcgg 36392161  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  36392162 ttaactgccgagga 36392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 41047838 - 41047902
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  41047838 agttaactgccgaggatcttctgctacaaatctggaggaagctctctcatccattattcatctca 41047902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 46863356 - 46863292
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  46863356 agttaactgccgaagatcttctgctacaaatctggcagaagctctttcatccattattcatctca 46863292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 265
Target Start/End: Complemental strand, 10225981 - 10225874
Alignment:
Q  159 aaattgttgttgacacattt-cataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgc 257  Q
    |||||||||||||||||||| |||||||||||  ||||||| |||||||| |||||||  ||||||||||||||||  ||||||| ||| || || |||     
T  10225981 aaattgttgttgacacattttcataaggctgaagcacataagtaaaatatgtttttgcctcctcgacagttaactgtcgatgaatgcaaaaattgactga 10225882  T
Q  258 agttaact 265  Q
    ||||||||    
T  10225881 agttaact 10225874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 28980309 - 28980202
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||  ||||||| |||||  |||||| |||| || |||||||||| | || |||||    
T  28980309 aattgttgttgacacattgcataaggctgagacacacgagtaaaatacgtttttgccccctcagcagttagctgccgaagaattcaatatccggatgcag 28980210  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  28980209 ttaactgc 28980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 46863480 - 46863373
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||| |||| ||||||||||||||||| || |||||||  ||||||| || ||| ||||||||||| ||  |||| || ||| ||||||||    
T  46863480 aattgttgttgacgcattgcataaggctgagacacacaagtaaaatacgtttttgccccatcggcagttaactgccgagaaattgaaaaaccggctgcag 46863381  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  46863380 ttaactgc 46863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 42682057 - 42682119
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  42682057 ttaactgccgaggatcttctgctacaaatctagcataagttctctcatccattattcatctca 42682119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 28980184 - 28980123
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatc 319  Q
    |||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  28980184 agttaactgccgaggattttctgctacaaatctgacagaagctctctcatccattattcatc 28980123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 30355375 - 30355262
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||||||| | |||||| |||  | |||||||   |||||| |||||| ||||||| |||||| |||||||| ||  ||||||||    
T  30355375 aattgttgttgacacatttcatatgactgagaaacacgagtaaaatacgcttttgccccctcggcagttaattgctgaagaattcaaaaatcggctgcag 30355276  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  30355275 ttaactgccgagga 30355262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 28115544 - 28115480
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||| ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  28115544 agttaactgttgagggtcttctgctacaaatctagcataagctctctcatccattattcatctca 28115480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 36394950 - 36394886
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  36394950 agttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccgttattaatctca 36394886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 45361586 - 45361693
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||  ||||||| |||||||| ||| |||| | |||||||| |||||||||||||| ||||||||||  || ||||| || | | ||||||||    
T  45361586 aattgttgttcccacatttgataaggctaagaaacatgagtaaaatatgtttttgctccctcggcagttaactgacgaggaattaaaaatccggctgcag 45361685  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  45361686 ttaactgc 45361693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 17838711 - 17838776
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||| || ||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  17838711 agttaactgccgacgatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 17838776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 27453730 - 27453617
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||| |||||||| |||||||| ||| |||||| |||||||    ||||| |||||| ||||||||||| || ||||| || | | ||||||||    
T  27453730 aattgttgttcacacatttgataaggcttagaaacataagtaaaatacgactttgccccctcggcagttaactgccgaggaattaaaaatccggctgcag 27453631  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  27453630 ttaactgccgagga 27453617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 41047715 - 41047827
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||| ||| | ||||||||||||||| |||||||||  ||||  |||||||||| || ||||| |||||  || || ||    
T  41047715 aattgttgttgacacattgcataagactgcggcacataaataaaatacatttttgct-tctcggtagttaactgcagaagaatttaataatcgggtgtag 41047813  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41047814 ttaactgccgagga 41047827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 40587722 - 40587786
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| ||||||||| ||||| |||||||  ||||| |||||||||||||||||||||||    
T  40587722 agttaactgccgaggatcttatgctataaatctgaaagaagctctctcatccattattcatctca 40587786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 37340239 - 37340346
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||||||| |||||| || || |||||||||||||||  ||||||   | ||||||||||||||  || |||||||| ||| || |||||    
T  37340239 aattgatgttgacacattacataagactaaggcacataaataaaatacgtttttgtctcttcgacagttaactgtcgaggaattcaaaaaccggttgcag 37340338  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  37340339 ttaactgc 37340346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 10708401 - 10708331
Alignment:
Q  165 ttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgct 235  Q
    |||||||||||||||||||| |||||| |||  | |||||||||||||||| || ||| ||||||||||||    
T  10708401 ttgttgacacatttcataagactgagaaacacgagtaaaatatatttttgccccttcggcagttaactgct 10708331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 28112778 - 28112852
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||||   |||||| | |||| ||||||||||    
T  28112778 aaattgttgttgacacatttcataaggttgagacacacaagtaaaatacgcttttgccctctcggcagttaactg 28112852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 266
Target Start/End: Original strand, 34622436 - 34622542
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| |||| || |||  ||  ||||||| |||| ||||||||||||| || ||||| |  ||| | ||||||    
T  34622436 aattgttgttgacacattgcataaggctgaggcacacaagtaatttacgtttttgcccccttgacagttaactgcagaggaattaagaaaccgactgcag 34622535  T
Q  260 ttaactg 266  Q
    |||||||    
T  34622536 ttaactg 34622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 41049324 - 41049212
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||  ||||||| |||||||   ||||| | | |||  |||||||||  || |||||||||||  ||||||||    
T  41049324 aattgttgttgacacattgcataaggctgatgcacataagtaaaatacgcttttg-ttcttcggtagttaactgtcgaagaattcaataatcggctgcag 41049226  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  41049225 ttaactgccgagga 41049212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 47060864 - 47060976
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||| ||||||||| |||||||||||||||| || | || |||||||  ||||||| |||||| ||||||||||  || |||||||| ||  ||||| ||    
T  47060864 aattattgttgacatatttcataaggctgaggcatacaagtaaaatacgtttttgccccctcggcagttaactgtcgaggaattcaa-aatcggctgtag 47060962  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  47060963 ttaactgccgagga 47060976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 273
Target Start/End: Original strand, 47776281 - 47776382
Alignment:
Q  172 cacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgag 271  Q
    ||||||| |||||||||||| |||  | |||||||   |||||| |||||||||||||||||| ||  |||| || | |||||||||||||||||| |||    
T  47776281 cacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgag 47776380  T
Q  272 ga 273  Q
    ||    
T  47776381 ga 47776382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 10705184 - 10705292
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||| |||||| ||||||||||||| || |||| || ||||||| |||||| | |||| | ||||||||||| ||  |||| || ||  |||||||    
T  10705184 aaattgttattgacatatttcataaggctaaggcacacaagtaaaatacatttttccccccttggcagttaactgccgagaaattaaaaaatcggctgca 10705283  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  10705284 gttaactgc 10705292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 258 - 318
Target Start/End: Complemental strand, 43686919 - 43686859
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcat 318  Q
    |||||||||| ||| || |||||||||||||||| || ||| |||||||||||||||||||    
T  43686919 agttaactgccgagaattttctgctacaaatctgacataagctctctcatccattattcat 43686859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 45364227 - 45364168
Alignment:
Q  263 actgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||| |||||||||| ||||||||||||| ||||| ||||| ||| |||||||||||||    
T  45364227 actgccgaggatcttcggctacaaatctggtagaagctctcttatctattattcatctca 45364168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 47673065 - 47673018
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  47673065 aaattgatgttgacatatttcataaggctgagacacacaaataaaata 47673018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 36186609 - 36186496
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||| |||||||||| | ||||  | |||||||   |||||| |||||| ||||||| ||| || |||||| | ||| || ||||    
T  36186609 aaattgttgttgacacattgcataaggctgtgtcacacgagtaaaatacgcttttgccccctcggcagttaaatgccgaggaattcga-aaccggttgca 36186511  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  36186510 gttaactgccgagga 36186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 40590627 - 40590553
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgc 234  Q
    ||||||||||  ||||||| |||||||||||| |||  |||||||||  ||||||| |||||| |||||||||||    
T  40590627 aattgttgttcccacatttgataaggctgagaaacacgaataaaatacgtttttgccccctcggcagttaactgc 40590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 42681931 - 42682044
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||| |||||| |||| ||||||||||| ||||||| ||||||  |||||||   |||||  ||||||| | |||  ||||||| |||  |||||||    
T  42681931 aattgttcttgacatattttataaggctgaggcacataagtaaaatgcatttttgtctcctcggtagttaacggttgagaaattcaaaaaccagctgcag 42682030  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  42682031 ttaactgccgagga 42682044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 46860457 - 46860553
Alignment:
Q  169 tgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaact 265  Q
    ||||||||| |||||||||||| |||| || |||||||   |||||| |||||| ||||||||||  || ||||| || ||| | ||||||||||||    
T  46860457 tgacacattacataaggctgaggcacacaagtaaaatacgcttttgccccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaact 46860553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 19044231 - 19044314
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 243  Q
    |||| ||||||||||||| |||||||||||| ||||| | |||||||  |||||| || |||| ||||||| ||| || |||||    
T  19044231 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt 19044314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 20710405 - 20710322
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaatt 243  Q
    |||| ||||||||||||| |||||||||||| ||||| | |||||||  |||||| || |||| ||||||| ||| || |||||    
T  20710405 aattattgttgacacattgcataaggctgaggcacatgagtaaaatacgtttttgttcactcggcagttaattgccgaggaatt 20710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 42684292 - 42684226
Alignment:
Q  167 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    ||||||| ||| ||||||||||||||||| || |||||||  |||||| ||| ||| ||||||||||    
T  42684292 gttgacatattgcataaggctgagacacacaagtaaaatacgtttttgttccatcggcagttaactg 42684226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 48316295 - 48316259
Alignment:
Q  284 caaatctggcagaaggtctctcatccattattcatct 320  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  48316295 caaatctggcagaagctctctcatccattattaatct 48316259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 265
Target Start/End: Original strand, 19053995 - 19054101
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||||||||| |||  | |||||||  ||||||| |||||||||||||||||| || |||||||| ||| |||||||    
T  19053995 aaattgttgttgacacatttcataaggctgagaaacacgagtaaaatacgtttttgccccctcgacagttaactgccgaggaattcaaaaaccggctgca 19054094  T
Q  259 gttaact 265  Q
    |||||||    
T  19054095 gttaact 19054101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 27487684 - 27487614
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27487684 ggctgcagttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 27487614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 14174942 - 14174859
Alignment:
Q  239 gaattcaataactggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| ||  |||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  14174942 gaattcaaaaatcggctgcagttaactgccgaggatcttctgctaaaaatctggcagaagctctctcatccattattcatctca 14174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 46973140 - 46973254
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||   |||||| |||| | ||||||||||| || |||||||| ||| |||||||    
T  46973140 aaattgttgttgacacatttcattaggctgagacacacaagtaaaatacgattttgcccccttggcagttaactgccgaggaattcaaaaaccggctgca 46973239  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  46973240 gttaactgccgagga 46973254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 29763231 - 29763167
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29763231 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 29763167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 42572769 - 42572705
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572769 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 42572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 13173772 - 13173885
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| |||||| |||||||||||||  |||||||| ||| |||||||    
T  13173772 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatactattttgccccctcggcagttaactgctg-ggaattcaaaaaccggctgca 13173870  T
Q  259 gttaactgctgagga 273  Q
    |||||| || |||||    
T  13173871 gttaacagccgagga 13173885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 11183123 - 11183236
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||| |||||||||||| | |  | |||||||  |||||||||||| |||||||||||||||| ||||| || | | ||||||||    
T  11183123 aattgttgttgacacatttgataaggctgagaaatacgagtaaaatacgtttttgctcccttgacagttaactgctgaggaattaaaaatccggctgcag 11183222  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  11183223 ttaactgccgagga 11183236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 322
Target Start/End: Complemental strand, 35527150 - 35526983
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| | ||||||||||||||||||||||| |||| || |||||||  |||||||   || | ||||||| ||| || ||| |||| ||| |||||||    
T  35527150 aaattgctcttgacacatttcataaggctgaggcacacaagtaaaatacgtttttgccttcttggcagttaattgccgaagaaatcaaaaacaggctgca 35527051  T
Q  259 gttaactgctgaggatcttctgctac--aaatctggcagaaggtc--tctcatccattattcatctca 322  Q
    ||||||||  ||||||||||||||||  |||| ||||||||  ||  |||||||||||||||||||||    
T  35527050 gttaactgtagaggatcttctgctacaaaaatatggcagaacctctatctcatccattattcatctca 35526983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 44596893 - 44596960
Alignment:
Q  255 tgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||||||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  44596893 tgcagttaactgctgagtatcttctgctacaaatttggcagaaactctctcatccattattcatctca 44596960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 41804170 - 41804056
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||   |||||| || ||| ||||||||||| || |||||||| ||| | |||||    
T  41804170 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgcttttgccccttcggcagttaactgccgaggaattcaaaaaccgactgca 41804071  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  41804070 gttaactgccgagga 41804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 258 - 320
Target Start/End: Complemental strand, 49927513 - 49927451
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49927513 agttaactaccgaggatcttctgctacaaatctggcagaagctctctcatccattattcatct 49927451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 26637257 - 26637204
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26637257 gaggatcttctgctacaaatctggcagaagctctctcatccattattcatctca 26637204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 36908514 - 36908627
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| ||||||||||||| |||||| |||| |||| || ||||||| ||||||||  ||||| ||||||||||  || |||||||| ||| |||||||    
T  36908514 aaattgatgttgacacattttataaggatgaggcacacaagtaaaatacatttttgcctcctcggcagttaactgtcgaagaattcaaaaaccggctgca 36908613  T
Q  259 gttaactgctgagg 272  Q
    ||||||||| ||||    
T  36908614 gttaactgccgagg 36908627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 46141719 - 46141832
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||| ||| ||||||||||||  ||| || |||||||   |||||| | |||| ||||||||||| || |||||||||||| ||||||||    
T  46141719 aattgttgttgacatattgcataaggctgaggtacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaattcaataaccggctgcag 46141818  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  46141819 ttaactgccgagga 46141832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 49426742 - 49426813
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  49426742 ggctgcaattaactgccgaggatcttctgctacaaatctggcagaatctcctctcatccattattcatctca 49426813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 13972001 - 13972112
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||||||||||||||||| ||| || |||||||  ||||||| || ||| ||||| ||||| || ||||| || ||||||||||||    
T  13972001 aattgttgttgacacatttcataaggctgagaaacacaagtaaaatacgtttttgccccttcggcagtt-actgccgaggaatt-aaaaactggctgcag 13972098  T
Q  260 ttaactgctgagga 273  Q
    ||||| || |||||    
T  13972099 ttaacagccgagga 13972112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 13972134 - 13972187
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  13972134 gaggatcttctgctacaaatctggcagaagctctctcatctattattcatctca 13972187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 6434809 - 6434873
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||  ||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  6434809 agttaactgccaaggatcttctgctacaaatctggtagaagcactctcatccattattcatctca 6434873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 13178267 - 13178155
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||| |||||  || ||   | |||||||  |||||||||||||| ||||||||||||||  |||| || |||  ||||||    
T  13178267 aaattgttgttgacacatttcattaggctatgaaacg--agtaaaatacgtttttgctccctcggcagttaactgctgagaaatttaaaaaccagctgca 13178170  T
Q  259 gttaactgctgagga 273  Q
    |||||||||||||||    
T  13178169 gttaactgctgagga 13178155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 49395664 - 49395714
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  49395664 agttaactgccgaggatcttctgctacaaatctggcagaagctctctcatc 49395714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 18975256 - 18975143
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||  |||| ||||||  ||| || |||||||  ||||||| |||||| | ||||||||  || ||||| ||||||||| |||||    
T  18975256 aattgttgttgacacattgtataaagctgaggtacacaagtaaaatacgtttttgccccctcggcggttaactgtcgaggaatttaataactggttgcag 18975157  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  18975156 ttaactgcagagga 18975143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 23276244 - 23276131
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||| || ||||| |||||||||||| |||  | |||||||  ||||||| |||||| |||||||||||||| ||||| || | | |||| |||    
T  23276244 aattgttgttcacgcatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgctgaggaattaaaaatccggctacag 23276145  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  23276144 ttaactgccgagga 23276131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 26633466 - 26633577
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||| |||| |||| || |||||||   |||||| ||||||   ||||||| | || |||||||| ||| || ||||    
T  26633466 aaattgttgttgacacatttcataaggttgaggcacacaagtaaaatacgcttttgccccctcg---gttaactaccgaagaattcaaaaaccggttgca 26633562  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  26633563 gttaactgccgagga 26633577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 29435034 - 29435097
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||| || |||||||||| ||||||||| |||||||||||||||||||||||    
T  29435034 agttaactgcagaggatttt-tgctacaaatttggcagaagttctctcatccattattcatctca 29435097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 35521550 - 35521654
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||   |||||| | |||| ||||||||||| || ||| | || ||| |||||||    
T  35521550 aaattgttgttgacacattttataaggctgaggcacacaagtaaaatacgattttgccctctcggcagttaactgccgaggaaataaaaaaccggctgca 35521649  T
Q  259 gttaa 263  Q
    |||||    
T  35521650 gttaa 35521654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 19499247 - 19499135
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||  ||||| ||||||| |||||||||| || |||||||  ||||||  |||||||||||||||||||||  |||| || |   |||||||    
T  19499247 aaattgttgttcgcacatatcataagactgagacacacaagtaaaatacgtttttg--ccctcgacagttaactgctgagaaatttaaaattcggctgca 19499150  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  19499149 gttaactgccgagga 19499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 262
Target Start/End: Complemental strand, 21944517 - 21944414
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||  |||||   ||||||| || ||||||  ||  |||| || ||| |||||||    
T  21944517 aaattgttgttgacacatatcataaggctgggacacataaataaaatacgtttttatcccctcgatagataactgtcgagaaatttaaaaaccggctgca 21944418  T
Q  259 gtta 262  Q
    ||||    
T  21944417 gtta 21944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 6437675 - 6437570
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||| |||||| |||| || |||||||   |||||| | |||| ||||||||||| || ||| |||||||  | ||||||    
T  6437675 aattgttgttgacacattgcataaagctgaggcacacaagtaaaatacgcttttgccctctcggcagttaactgccgaggaagtcaataatcgactgcag 6437576  T
Q  260 ttaact 265  Q
    ||||||    
T  6437575 ttaact 6437570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 13147556 - 13147621
Alignment:
Q  257 cagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||||||  || ||||||||||||||||||||| | ||  |||||||||||||||||||||||    
T  13147556 cagttaactgtcgatgatcttctgctacaaatctggtaaaaactctctcatccattattcatctca 13147621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 51269010 - 51269063
Alignment:
Q  269 gaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||||||| | ||||||| |||||||| ||||||||||||||    
T  51269010 gaggatcttctgctacaaatttagcagaagctctctcattcattattcatctca 51269063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 4208454 - 4208502
Alignment:
Q  270 aggatcttctgctacaaatctggcagaaggtctctcatccattattcat 318  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||    
T  4208454 aggatcttctgctacaaatctaccagaagctctctcatccattattcat 4208502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 1656221 - 1656155
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacag 226  Q
    ||||||||||||||||||||||||||| ||||| |||  | |||||||| ||||||| ||||||||||    
T  1656221 aaattgttgttgacacatttcataaggttgagaaacacgagtaaaatatgtttttgc-ccctcgacag 1656155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 49927649 - 49927542
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||||||||||||||||||||| ||| |||| |||  | |||||||  ||||||  |||||| ||||||||||| || ||||| || ||| ||||  ||    
T  49927649 aattgttgttgacacatttcatatggccgagaaacacgagtaaaatacgtttttgtcccctcggcagttaactgccgaagaatttaaaaaccggctatag 49927550  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  49927549 ttaactgc 49927542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 36076694 - 36076581
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| |||||||||||||||||||||||||| ||| || |||||||   |||| | || |||  |||||||  | || |||||||| ||| |||||||    
T  36076694 aaattgctgttgacacatttcataaggctgagaaacacaagtaaaata-cgttttaccccttcggtagttaaccaccgaggaattcaaaaaccggctgca 36076596  T
Q  259 gttaactgctgagga 273  Q
    ||||||||| |||||    
T  36076595 gttaactgccgagga 36076581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 49857984 - 49857873
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||| |||||| ||||||||  || |||||||  |   ||| |||||| ||||||||||| |||||||| || ||   ||||||    
T  49857984 aaattgttgttgacacattttataaggttgagacac--aagtaaaatacgtaaatgccccctcggcagttaactgccgatgaatttaaaaatcagctgca 49857887  T
Q  259 gttaactgctgagg 272  Q
    ||||||||| ||||    
T  49857886 gttaactgccgagg 49857873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 49924793 - 49924906
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| ||||  | |||  ||  ||||||| || ||| || |||||||| ||  ||||||| ||| |||| |||    
T  49924793 aattgttgttgacacattgcataaggctgaggcacacgagtaatttacgtttttgccccttcggcaattaactgccgaaaaattcaaaaaccggctacag 49924892  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  49924893 ttaactgccgagga 49924906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 7965977 - 7966032
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttg 214  Q
    ||||||||||||||| ||||||||||| |||| |||| || ||||||| |||||||    
T  7965977 aaattgttgttgacatatttcataaggttgaggcacaaaagtaaaatacatttttg 7966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 267
Target Start/End: Original strand, 27485008 - 27485103
Alignment:
Q  172 cacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    ||||||| |||||||||||| |||  | |||||||  ||||||| |||||| |||||||||||  | ||||| || | | ||||||||||||||||    
T  27485008 cacatttgataaggctgagaaacacgagtaaaatacgtttttgccccctcggcagttaactgcctaggaattaaaaatccggctgcagttaactgc 27485103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 36072306 - 36072353
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    ||||||||||||||||||||||||||| | || |||| ||||||||||    
T  36072306 aaattgttgttgacacatttcataaggttaaggcacacaaataaaata 36072353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 29709309 - 29709259
Alignment:
Q  272 gatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||| ||||| |||||| ||||||| ||| |||||||||||||||||||    
T  29709309 gatcttttgctataaatctagcagaagctctttcatccattattcatctca 29709259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 36908648 - 36908699
Alignment:
Q  275 cttctgctacaaatctggcagaaggtctc----tcatccattattcatctca 322  Q
    |||||||||||||||||||||||| ||||    |||||||||||||||||||    
T  36908648 cttctgctacaaatctggcagaagctctctcattcatccattattcatctca 36908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 36911803 - 36911737
Alignment:
Q  161 attgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagt 227  Q
    |||||||||||||||||||||||||||||| |  |||| |||||||  |||||| | ||||| ||||    
T  36911803 attgttgttgacacatttcataaggctgaggcggataagtaaaatacgtttttgtttcctcggcagt 36911737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 41779766 - 41779804
Alignment:
Q  284 caaatctggcagaaggtctctcatccattattcatctca 322  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  41779766 caaatctagcagaagctctctcatccattattcatctca 41779804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 42570078 - 42570152
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    |||||||||||||||| ||||||||||||||| |||| || ||||| |   |||| |  ||||||||||||||||    
T  42570078 aaattgttgttgacacgtttcataaggctgaggcacacaagtaaaacacgattttacatcctcgacagttaactg 42570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 35181334 - 35181387
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatattttt 213  Q
    |||||||||||||||||| ||||| |||||  ||||  ||||||||||||||||    
T  35181334 aattgttgttgacacattgcataaagctgaagcacacgaataaaatatattttt 35181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 35258997 - 35258904
Alignment:
Q  171 acacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaac 264  Q
    ||||||||||||||||||||||||| || |||||||  |   |||||  ||| ||||||||||| || ||||| || | | |||||||||||||    
T  35258997 acacatttcataaggctgagacacacaagtaaaatacgtaaatgctcattcggcagttaactgccgaggaattaaaaatccggctgcagttaac 35258904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 24364716 - 24364680
Alignment:
Q  279 tgctacaaatctggcagaaggtctctcatccattatt 315  Q
    |||||||||||||||||||| |||| |||||||||||    
T  24364716 tgctacaaatctggcagaagctctcacatccattatt 24364680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 44338264 - 44338216
Alignment:
Q  272 gatcttctgctacaaatctggcagaaggtctctcatccattattcatct 320  Q
    |||||||||||||||||||  || ||| ||||||||| |||||||||||    
T  44338264 gatcttctgctacaaatctatcataagttctctcatctattattcatct 44338216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 29061282 - 29061395
Alignment:
Q  209 tttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatc 308  Q
    ||||||| |||||| ||||||||||| || |||||  | |   |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||||    
T  29061282 tttttgccccctcggcagttaactgccgaggaattagaaattcggctgcagttaacttccgaggatcttctgctacaaatctggtagaagctctctcatc 29061381  T
Q  309 cattattcatctca 322  Q
    ||||||||||||||    
T  29061382 cattattcatctca 29061395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 32034410 - 32034340
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  32034410 ggctgcagttaactgccgatgatcttctgctacaaatctggcagaagatctcttatccattattcgtctca 32034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 12783969 - 12783905
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  12783969 agttaactgccgaggatcttctgctacaaatctggaaaaagctctctcatccattattcatctca 12783905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 271
Target Start/End: Original strand, 13479662 - 13479774
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||   |||||| ||||||  |||||||||  |  |||||||| |||  ||||||    
T  13479662 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaatacgcttttgccccctcggtagttaactgtcggggaattcaaaaaccagctgca 13479761  T
Q  259 gttaactgctgag 271  Q
    |||||||||||||    
T  13479762 gttaactgctgag 13479774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 29065791 - 29065853
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29065791 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 29074804 - 29074866
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29074804 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 29079568 - 29079630
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29079568 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29079630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 29107377 - 29107439
Alignment:
Q  260 ttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  29107377 ttaactgtcgaggatcttctgctacaaatctggcggaagctctctcatccattattcatctca 29107439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 35021399 - 35021286
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||| |||||||||||||| ||| |||||||| |||  | ||||||| | |||||| |||||| ||||||| ||| || |||||||| ||| ||||||||    
T  35021399 aattattgttgacacattttatatggctgagaaacacgagtaaaatacacttttgccccctcggcagttaaatgcggaagaattcaaaaaccggctgcag 35021300  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  35021299 ttaactgccgagga 35021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 13401547 - 13401611
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||| | |||||||||||||||||||| || |||||| |||||||||||||||||||||||    
T  13401547 agttaactaccgaggatcttctgctacaaatatgacagaagctctctcatccattattcatctca 13401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 23958826 - 23958940
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||||||||||||||| | |||||||||||||||  || |||||||  ||||||  |||||| ||||||||||| ||  ||||| | ||| |||||||    
T  23958826 aaattgttgttgacacatatgataaggctgagacacccaactaaaatacgtttttgtcccctcggcagttaactgccgagaaattccaaaaccggctgca 23958925  T
Q  259 gttaactgctgagga 273  Q
    ||||| ||| |||||    
T  23958926 gttaaatgccgagga 23958940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 262
Target Start/End: Complemental strand, 12784074 - 12783991
Alignment:
Q  179 cataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagtta 262  Q
    |||||||||||| |||| || |||||||   |||||| || ||| ||||||||||| ||||||||||||||| |||||||||||    
T  12784074 cataaggctgaggcacacaagtaaaatacgcttttgccccatcggcagttaactgccgatgaattcaataaccggctgcagtta 12783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 26701795 - 26701861
Alignment:
Q  166 tgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaact 232  Q
    |||||||||||||||| |||||||| |||| |||||||||||  |||||| | ||||||||||||||    
T  26701795 tgttgacacatttcattaggctgaggcacacaaataaaatatgattttgcccactcgacagttaact 26701861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 267
Target Start/End: Complemental strand, 23986099 - 23986010
Alignment:
Q  178 tcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    |||||||||||||||||| || |||||||  ||||||| |||| | ||||||||||| ||  ||||||| ||| || |||||||||||||    
T  23986099 tcataaggctgagacacacaagtaaaatacgtttttgcccccttggcagttaactgccgagaaattcaaaaaccggttgcagttaactgc 23986010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 267
Target Start/End: Complemental strand, 13404768 - 13404661
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||| ||||||| |||||||| ||| |||| || |||||||    ||||| ||||||  |||||||||  || ||||||||||||  |||||||    
T  13404768 aattgttgttaacacattgcataaggccgaggcacacaagtaaaatacgcgtttgccccctcggtagttaactgtcgaggaattcaataacctgctgcag 13404669  T
Q  260 ttaactgc 267  Q
    ||||||||    
T  13404668 ttaactgc 13404661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 32026041 - 32026088
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaata 206  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||    
T  32026041 aaattgttgttgacacatttcataaggctgaggcacacaagtaaaata 32026088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 273
Target Start/End: Original strand, 2050974 - 2051078
Alignment:
Q  168 ttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactgc 267  Q
    |||||||||| |||||||||||  ||||  | |||||||  |||||||||| ||| ||||||||||| ||||||||  | ||| || |||||||||||||    
T  2050974 ttgacacattgcataaggctgatgcacacgagtaaaatacgtttttgctccttcggcagttaactgccgatgaatttga-aaccggttgcagttaactgc 2051072  T
Q  268 tgagga 273  Q
     |||||    
T  2051073 cgagga 2051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 13401423 - 13401536
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| ||||||||||||| |||||| ||||  |||  | | ||||||  |||||| |||||| ||||||||||| || ||||| || ||  ||||||||    
T  13401423 aattgatgttgacacattttataaggttgagtaacacgagttaaatatgcttttgccccctcggcagttaactgccgaggaattaaaaaatcggctgcag 13401522  T
Q  260 ttaactgctgagga 273  Q
    ||||||||| ||||    
T  13401523 ttaactgctaagga 13401536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Complemental strand, 25141215 - 25141102
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| |||||||||||| ||||  |||||  ||||||||||  |  ||| ||||||||||  || ||||||||  ||  ||| |||    
T  25141215 aattgttgttgacacattgcataaggctgaggcacacgaataatttatatttttgtccattcggcagttaactgtcgaggaattcaaataccagctacag 25141116  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  25141115 ttaactgccgagga 25141102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 26855976 - 26856013
Alignment:
Q  278 ctgctacaaatctggcagaaggtctctcatccattatt 315  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26855976 ctgctacaaatctggcagaagctctctcatccattatt 26856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 17596808 - 17596764
Alignment:
Q  278 ctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||| |||||||||||||| | |||||||||||||||||||||    
T  17596808 ctgctataaatctggcagaagctatctcatccattattcatctca 17596764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 18001150 - 18001257
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    ||||||||||||||||||||||||||| ||||  ||| || |||||||| |   ||| |  ||| |||||||||| ||| ||||| || ||| |||||||    
T  18001150 aaattgttgttgacacatttcataaggttgaggtacacaagtaaaatatgtaaatgccctatcggcagttaactgttgaggaatt-aaaaaccggctgca 18001248  T
Q  259 gttaactgc 267  Q
    |||||||||    
T  18001249 gttaactgc 18001257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 6320625 - 6320552
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactg 233  Q
    |||||||||||||| |||| |||||| ||||| |||  |||||||||| ||||||   ||||| ||||||||||    
T  6320625 aattgttgttgacatatttgataaggttgagaaacacgaataaaatatgtttttgtctcctcggcagttaactg 6320552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 29286166 - 29286279
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    |||||||||||||||||| ||||||| |||| |||| || |||  ||  ||||||| ||||||  |||||||||| || ||| | |  ||| || |||||    
T  29286166 aattgttgttgacacattgcataaggttgaggcacacaagtaatttacgtttttgccccctcggtagttaactgccgaggaaataagaaaccggttgcag 29286265  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  29286266 ttaactgccgagga 29286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 271
Target Start/End: Complemental strand, 11847 - 11735
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgca 258  Q
    |||||| ||||||||||||| |||||  ||||| ||| || ||||||| | |||||| || ||| |||||||||||||| |||||||| ||| |||||||    
T  11847 aaattgctgttgacacattttataagattgagatacacaagtaaaatacacttttgccccttcggcagttaactgctgaagaattcaaaaaccggctgca 11748  T
Q  259 gttaactgctgag 271  Q
    |||||||||||||    
T  11747 gttaactgctgag 11735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 252 - 322
Target Start/End: Original strand, 851 - 921
Alignment:
Q  252 ggctgcagttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||| ||||| |||||||||||||||||    
T  851 ggctgcagttaactgccgaggatcttcctctacaaatctggcagaagctctcttatccattattcatctca 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 18911 - 18847
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggtctctcatccattattcatctca 322  Q
    |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  18911 agttaactgtcgaggatcttctgctacaaatctggcagaagctttctcatccattattcatctca 18847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 12400 - 12335
Alignment:
Q  258 agttaactgctgaggatcttctgctacaaatctggcagaaggt-ctctcatccattattcatctca 322  Q
    |||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  12400 agttaactgccgaggatcttctgctacaaatctggcagaatctactctcatccattattcatctca 12335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 267
Target Start/End: Complemental strand, 7433 - 7333
Alignment:
Q  167 gttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcagttaactg 266  Q
    ||||||| ||||||||||| |||| ||||| | |||||||| |||||||  ||| ||||||||| |||||| |||||||| ||| ||||||| | |||||    
T  7433 gttgacaaatttcataaggttgaggcacatgagtaaaatatgtttttgcctccttgacagttaattgctgaggaattcaaaaaccggctgcaatcaactg 7334  T
Q  267 c 267  Q
    |    
T  7333 c 7333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 273
Target Start/End: Original strand, 3823 - 3935
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataactggctgcag 259  Q
    ||||| |||||||| |||  |||||| |||| |||| || |||||||| ||||||  |||||| ||||||||||  || |||||||| ||  ||||||||    
T  3823 aattgatgttgacaaattggataaggttgaggcacacaagtaaaatat-tttttgtcccctcggcagttaactgtcgaggaattcaaaaatcggctgcag 3921  T
Q  260 ttaactgctgagga 273  Q
    |||||||| |||||    
T  3922 ttaactgccgagga 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 266
Target Start/End: Complemental strand, 570 - 464
Alignment:
Q  160 aattgttgttgacacatttcataaggctgagacacataaataaaatatatttttgctccctcgacagttaactgctgatgaattcaataa-ctggctgca 258  Q
    ||||| |||| |||||||| ||||| |||||| |||  | |||||||   ||||||||||||| ||||||||||| || ||||| ||||| | |||||||    
T  570 aattgatgtttacacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaatt-aataatccggctgca 472  T
Q  259 gttaactg 266  Q
    ||||||||    
T  471 gttaactg 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 932 - 884
Alignment:
Q  159 aaattgttgttgacacatttcataaggctgagacacataaataaaatat 207  Q
    |||||| |||||||| |||||||||||||||| |||| || ||||||||    
T  932 aaattgctgttgacatatttcataaggctgaggcacacaagtaaaatat 884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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