View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3946_high_11 (Length: 243)
Name: NF3946_high_11
Description: NF3946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3946_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 34426756 - 34426996
Alignment:
| Q |
1 |
aaagactcaaatctatgctattaagaatctgaaaatatctaaactaataatcgagtctgagaccattggtcaagtcaagaaaggattatctaaaaagcta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
34426756 |
aaagactcaaatctatgctattaagaatctgaaaatatctaaactaataatcgagtctgagaccattggtcaagtcaagaaaggattatctaacaagcta |
34426855 |
T |
|
| Q |
101 |
caatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaagggcacaggatgtttgacatcaggagtacaaagtta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
34426856 |
caatatttaaggttgaggcaacatcaaatttcatgctgttcatttgcattgtcaatcacataaagggcacaggatgtttgacatcagtagtacaaagtta |
34426955 |
T |
|
| Q |
201 |
atcaagatatgagataatatttcatagtttatacctctctg |
241 |
Q |
| |
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||||||||||||||||||| ||||||||||||||||||||| |
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| T |
34426956 |
atcaagatatgagataataattcatagtttatacctctctg |
34426996 |
T |
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