View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3950_high_6 (Length: 238)
Name: NF3950_high_6
Description: NF3950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3950_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 22733473 - 22733275
Alignment:
| Q |
19 |
ttaaagactcagaaatttgaaacataaccacttatatatacccagacagcattatcagagagatatatgttctatcataatctttgtgctatgttagcat |
118 |
Q |
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| T |
22733473 |
ttaaagactcagaaatttgaaacataaccacttatatatacccagacagcattatcagagagatatatgttctatcataatctttgtgctatgttagtat |
22733374 |
T |
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| Q |
119 |
aaatgtgtcctttttcttcttcnnnnnnnnngatacccctacctttttaacttctttccctacattgtcatgtttttagctctacacatatagaaaatt |
217 |
Q |
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| T |
22733373 |
aaatgtgtcctttttcttcttcaaaaaaaaagatatccctacctttttaacttctttccctatattgtcatgtttttagctgtacacatatagaaaatt |
22733275 |
T |
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