View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3950_low_8 (Length: 206)

Name: NF3950_low_8
Description: NF3950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3950_low_8
NF3950_low_8
[»] chr7 (48 HSPs)
chr7 (42-149)||(20597807-20597914)
chr7 (79-149)||(9802651-9802721)
chr7 (41-149)||(3779286-3779394)
chr7 (150-206)||(17235949-17236005)
chr7 (153-206)||(45846280-45846333)
chr7 (150-206)||(8471951-8472007)
chr7 (165-206)||(12462930-12462971)
chr7 (150-206)||(8469889-8469945)
chr7 (150-206)||(8941683-8941739)
chr7 (150-206)||(14268584-14268640)
chr7 (81-149)||(15304117-15304185)
chr7 (51-120)||(19416739-19416808)
chr7 (65-149)||(12223046-12223130)
chr7 (150-203)||(5294104-5294158)
chr7 (150-203)||(5295277-5295331)
chr7 (150-203)||(5296450-5296504)
chr7 (150-203)||(3387805-3387858)
chr7 (149-206)||(10500275-10500332)
chr7 (149-206)||(10505304-10505361)
chr7 (49-125)||(9065008-9065084)
chr7 (149-201)||(15375581-15375633)
chr7 (51-110)||(16812441-16812501)
chr7 (79-149)||(9762159-9762229)
chr7 (148-198)||(13870592-13870642)
chr7 (90-124)||(16411456-16411490)
chr7 (150-192)||(29051790-29051832)
chr7 (91-140)||(2501605-2501654)
chr7 (177-206)||(4072153-4072182)
chr7 (177-206)||(8755821-8755850)
chr7 (150-203)||(9944683-9944736)
chr7 (150-203)||(10062534-10062587)
chr7 (150-203)||(14317172-14317225)
chr7 (149-198)||(14947987-14948036)
chr7 (150-203)||(18431941-18431994)
chr7 (177-206)||(23556711-23556740)
chr7 (73-125)||(1878895-1878947)
chr7 (177-205)||(10658523-10658551)
chr7 (101-149)||(13263306-13263354)
chr7 (177-205)||(15203528-15203556)
chr7 (150-198)||(16233769-16233817)
chr7 (150-198)||(16411306-16411354)
chr7 (177-205)||(18008287-18008315)
chr7 (177-205)||(18959293-18959321)
chr7 (150-198)||(20383992-20384040)
chr7 (150-198)||(26354848-26354896)
chr7 (150-198)||(26357300-26357348)
chr7 (178-206)||(36704252-36704280)
chr7 (147-203)||(48274853-48274909)
[»] scaffold0606 (1 HSPs)
scaffold0606 (49-138)||(4981-5070)
[»] chr8 (23 HSPs)
chr8 (44-149)||(17879100-17879205)
chr8 (150-206)||(11361764-11361820)
chr8 (150-206)||(17450386-17450442)
chr8 (150-206)||(25147368-25147424)
chr8 (150-206)||(38546921-38546977)
chr8 (149-206)||(5339694-5339750)
chr8 (65-124)||(17687439-17687498)
chr8 (65-140)||(24498726-24498801)
chr8 (44-125)||(15598255-15598337)
chr8 (150-198)||(26220917-26220965)
chr8 (149-195)||(24484917-24484963)
chr8 (86-140)||(24634828-24634882)
chr8 (152-206)||(32123000-32123054)
chr8 (177-206)||(19700511-19700540)
chr8 (150-203)||(20045065-20045118)
chr8 (98-139)||(21287923-21287964)
chr8 (177-206)||(22583332-22583361)
chr8 (177-206)||(23948614-23948643)
chr8 (150-203)||(39835274-39835327)
chr8 (98-139)||(45568507-45568548)
chr8 (150-198)||(5609487-5609535)
chr8 (150-198)||(14408313-14408361)
chr8 (150-198)||(18676930-18676978)
[»] scaffold0340 (1 HSPs)
scaffold0340 (49-149)||(17439-17539)
[»] scaffold0003 (3 HSPs)
scaffold0003 (150-206)||(153014-153070)
scaffold0003 (90-124)||(168-202)
scaffold0003 (150-198)||(18-66)
[»] chr2 (28 HSPs)
chr2 (41-125)||(33240175-33240259)
chr2 (41-125)||(33248096-33248180)
chr2 (150-206)||(24672224-24672280)
chr2 (149-203)||(22172655-22172709)
chr2 (150-206)||(20320614-20320670)
chr2 (150-206)||(22611685-22611741)
chr2 (150-206)||(23705894-23705950)
chr2 (150-206)||(23932830-23932886)
chr2 (50-124)||(16735548-16735622)
chr2 (49-110)||(40202959-40203020)
chr2 (150-203)||(22106574-22106628)
chr2 (149-203)||(26393648-26393702)
chr2 (150-206)||(24919385-24919441)
chr2 (147-198)||(23134575-23134626)
chr2 (91-149)||(25918228-25918286)
chr2 (150-203)||(29602416-29602470)
chr2 (177-206)||(25046470-25046499)
chr2 (150-195)||(28578349-28578394)
chr2 (149-198)||(34401393-34401442)
chr2 (150-203)||(45026881-45026934)
chr2 (150-198)||(18810189-18810237)
chr2 (150-198)||(23132108-23132156)
chr2 (150-198)||(23136813-23136861)
chr2 (163-203)||(24941933-24941973)
chr2 (150-198)||(26506622-26506670)
chr2 (150-198)||(26509099-26509147)
chr2 (150-198)||(27919635-27919683)
chr2 (150-198)||(39683562-39683610)
[»] scaffold0839 (1 HSPs)
scaffold0839 (149-206)||(776-833)
[»] scaffold0711 (1 HSPs)
scaffold0711 (150-206)||(6413-6469)
[»] scaffold0059 (2 HSPs)
scaffold0059 (150-206)||(30134-30190)
scaffold0059 (150-206)||(60908-60964)
[»] scaffold0035 (2 HSPs)
scaffold0035 (150-206)||(107778-107834)
scaffold0035 (150-206)||(116279-116335)
[»] scaffold0002 (1 HSPs)
scaffold0002 (150-206)||(387286-387342)
[»] chr4 (34 HSPs)
chr4 (150-206)||(15488954-15489010)
chr4 (150-206)||(52871149-52871205)
chr4 (152-206)||(14826766-14826820)
chr4 (150-206)||(1604188-1604244)
chr4 (150-206)||(15480499-15480555)
chr4 (150-202)||(23802003-23802055)
chr4 (65-149)||(24619141-24619225)
chr4 (163-206)||(14745175-14745218)
chr4 (150-206)||(19858915-19858971)
chr4 (145-203)||(19243927-19243986)
chr4 (150-196)||(55990637-55990683)
chr4 (150-206)||(14827079-14827135)
chr4 (149-203)||(54797525-54797579)
chr4 (150-203)||(14281612-14281665)
chr4 (150-203)||(44616528-44616581)
chr4 (150-206)||(363613-363669)
chr4 (150-198)||(44771967-44772015)
chr4 (150-201)||(44432008-44432059)
chr4 (52-138)||(5902137-5902223)
chr4 (44-110)||(15193199-15193265)
chr4 (149-203)||(44927546-44927600)
chr4 (177-206)||(21537-21566)
chr4 (150-203)||(14872956-14873009)
chr4 (177-206)||(15613443-15613472)
chr4 (150-203)||(18238481-18238534)
chr4 (150-198)||(1836388-1836436)
chr4 (150-198)||(7640055-7640103)
chr4 (65-121)||(10328915-10328971)
chr4 (150-198)||(14717588-14717636)
chr4 (151-203)||(18214181-18214233)
chr4 (177-205)||(25093281-25093309)
chr4 (177-205)||(27997140-27997168)
chr4 (150-198)||(29268601-29268649)
chr4 (177-205)||(51993915-51993943)
[»] chr3 (29 HSPs)
chr3 (150-206)||(20629014-20629070)
chr3 (152-206)||(12118596-12118650)
chr3 (149-206)||(17681563-17681620)
chr3 (51-124)||(19431878-19431951)
chr3 (150-203)||(24514686-24514739)
chr3 (150-206)||(55318198-55318254)
chr3 (150-206)||(16854173-16854229)
chr3 (150-203)||(22792517-22792570)
chr3 (68-124)||(1463816-1463872)
chr3 (44-140)||(7921292-7921387)
chr3 (65-124)||(17769626-17769685)
chr3 (65-124)||(19070927-19070986)
chr3 (49-124)||(19225269-19225344)
chr3 (150-203)||(55477729-55477782)
chr3 (73-140)||(16093923-16093990)
chr3 (96-139)||(45862180-45862223)
chr3 (150-203)||(1864036-1864090)
chr3 (149-203)||(29171531-29171585)
chr3 (153-203)||(54587270-54587320)
chr3 (177-206)||(12277150-12277179)
chr3 (96-149)||(13953758-13953811)
chr3 (98-139)||(13953790-13953831)
chr3 (150-203)||(15978774-15978827)
chr3 (150-198)||(7780222-7780270)
chr3 (150-198)||(21619749-21619797)
chr3 (150-198)||(27166392-27166440)
chr3 (150-198)||(28847487-28847535)
chr3 (150-198)||(34160571-34160619)
chr3 (150-198)||(41125078-41125126)
[»] chr1 (32 HSPs)
chr1 (150-206)||(43543922-43543978)
chr1 (66-140)||(18515486-18515560)
chr1 (150-206)||(20943762-20943818)
chr1 (150-206)||(34771020-34771076)
chr1 (150-206)||(37524951-37525007)
chr1 (50-138)||(23917304-23917394)
chr1 (149-206)||(21506581-21506638)
chr1 (149-201)||(42314334-42314386)
chr1 (65-142)||(25398861-25398938)
chr1 (150-201)||(16402269-16402320)
chr1 (150-203)||(1573585-1573638)
chr1 (150-203)||(12759226-12759279)
chr1 (150-203)||(13990106-13990159)
chr1 (149-206)||(29299485-29299542)
chr1 (150-203)||(49262345-49262398)
chr1 (150-194)||(21737625-21737669)
chr1 (150-206)||(22049888-22049944)
chr1 (96-139)||(21543563-21543606)
chr1 (150-203)||(21440971-21441025)
chr1 (150-203)||(23592612-23592666)
chr1 (99-149)||(47194833-47194883)
chr1 (150-203)||(16274228-16274281)
chr1 (149-198)||(21473952-21474001)
chr1 (177-206)||(24727718-24727747)
chr1 (150-191)||(27161024-27161065)
chr1 (149-198)||(29777872-29777921)
chr1 (177-206)||(44821702-44821731)
chr1 (150-198)||(9044172-9044220)
chr1 (150-198)||(12945619-12945667)
chr1 (150-198)||(16363165-16363213)
chr1 (150-198)||(21842017-21842065)
chr1 (65-149)||(22639744-22639827)
[»] scaffold1272 (1 HSPs)
scaffold1272 (150-205)||(1425-1480)
[»] chr5 (13 HSPs)
chr5 (50-149)||(12078309-12078407)
chr5 (150-206)||(24474310-24474366)
chr5 (65-136)||(26119189-26119260)
chr5 (150-191)||(41860242-41860283)
chr5 (150-205)||(11580135-11580190)
chr5 (143-197)||(21573995-21574049)
chr5 (150-203)||(31062564-31062618)
chr5 (150-203)||(36315772-36315826)
chr5 (150-203)||(41094487-41094541)
chr5 (98-139)||(32160273-32160314)
chr5 (150-198)||(20910260-20910308)
chr5 (150-198)||(23065703-23065751)
chr5 (150-202)||(29331231-29331283)
[»] scaffold0452 (1 HSPs)
scaffold0452 (148-206)||(215-273)
[»] scaffold0047 (2 HSPs)
scaffold0047 (152-206)||(23576-23630)
scaffold0047 (150-206)||(23889-23945)
[»] scaffold0040 (1 HSPs)
scaffold0040 (152-206)||(21062-21116)
[»] scaffold0005 (2 HSPs)
scaffold0005 (152-206)||(12889-12943)
scaffold0005 (150-206)||(12574-12630)
[»] chr6 (31 HSPs)
chr6 (49-138)||(12183480-12183569)
chr6 (150-204)||(15876864-15876918)
chr6 (150-203)||(18318083-18318136)
chr6 (150-205)||(20184076-20184131)
chr6 (150-205)||(22151860-22151915)
chr6 (149-203)||(21738518-21738572)
chr6 (150-203)||(15738444-15738497)
chr6 (150-203)||(23531550-23531603)
chr6 (150-203)||(23540317-23540370)
chr6 (150-201)||(8056272-8056323)
chr6 (150-203)||(4642739-4642793)
chr6 (150-203)||(18324145-18324199)
chr6 (150-203)||(3850660-3850713)
chr6 (150-203)||(4971477-4971530)
chr6 (177-206)||(12041304-12041333)
chr6 (49-102)||(13242687-13242740)
chr6 (150-203)||(15741224-15741277)
chr6 (150-203)||(16198737-16198790)
chr6 (150-203)||(17882365-17882418)
chr6 (150-203)||(18179635-18179688)
chr6 (65-110)||(31720232-31720277)
chr6 (177-206)||(31731558-31731587)
chr6 (149-198)||(33865523-33865572)
chr6 (150-198)||(2290046-2290094)
chr6 (65-149)||(14757808-14757891)
chr6 (148-192)||(15900261-15900305)
chr6 (150-190)||(19102119-19102159)
chr6 (150-198)||(20104455-20104503)
chr6 (178-206)||(24549841-24549869)
chr6 (152-203)||(25753751-25753803)
chr6 (150-198)||(33863042-33863090)
[»] scaffold0116 (1 HSPs)
scaffold0116 (150-206)||(46120-46176)
[»] scaffold1339 (1 HSPs)
scaffold1339 (49-149)||(1704-1805)
[»] scaffold0107 (1 HSPs)
scaffold0107 (148-205)||(11185-11242)
[»] scaffold0317 (1 HSPs)
scaffold0317 (150-202)||(5928-5980)
[»] scaffold0306 (1 HSPs)
scaffold0306 (150-202)||(10331-10383)
[»] scaffold0112 (2 HSPs)
scaffold0112 (150-206)||(19646-19702)
scaffold0112 (150-206)||(28325-28381)
[»] scaffold0043 (1 HSPs)
scaffold0043 (163-203)||(11316-11356)
[»] scaffold0513 (1 HSPs)
scaffold0513 (150-197)||(9299-9346)
[»] scaffold0254 (1 HSPs)
scaffold0254 (145-203)||(21975-22034)
[»] scaffold1439 (1 HSPs)
scaffold1439 (150-203)||(1400-1453)
[»] scaffold0230 (3 HSPs)
scaffold0230 (150-203)||(22333-22386)
scaffold0230 (150-203)||(20156-20210)
scaffold0230 (149-198)||(15193-15242)
[»] scaffold0747 (1 HSPs)
scaffold0747 (154-206)||(1912-1964)
[»] scaffold0601 (1 HSPs)
scaffold0601 (150-206)||(9749-9804)
[»] scaffold0028 (5 HSPs)
scaffold0028 (149-203)||(137919-137973)
scaffold0028 (149-203)||(142857-142911)
scaffold0028 (150-203)||(135450-135503)
scaffold0028 (150-203)||(140388-140441)
scaffold0028 (150-203)||(145326-145379)
[»] scaffold1137 (1 HSPs)
scaffold1137 (150-203)||(1232-1285)
[»] scaffold0319 (1 HSPs)
scaffold0319 (150-203)||(6819-6872)
[»] scaffold0247 (1 HSPs)
scaffold0247 (150-203)||(16901-16954)
[»] scaffold0191 (1 HSPs)
scaffold0191 (150-191)||(3946-3987)
[»] scaffold0142 (1 HSPs)
scaffold0142 (150-191)||(17978-18019)
[»] scaffold0037 (1 HSPs)
scaffold0037 (150-191)||(83337-83378)
[»] scaffold0031 (1 HSPs)
scaffold0031 (150-203)||(55878-55931)
[»] scaffold0021 (1 HSPs)
scaffold0021 (150-203)||(1061-1114)
[»] scaffold0574 (1 HSPs)
scaffold0574 (150-206)||(7698-7754)
[»] scaffold0970 (1 HSPs)
scaffold0970 (150-201)||(1152-1203)
[»] scaffold1327 (1 HSPs)
scaffold1327 (150-203)||(82-136)
[»] scaffold0577 (1 HSPs)
scaffold0577 (150-200)||(5084-5134)
[»] scaffold0022 (1 HSPs)
scaffold0022 (148-198)||(117798-117848)
[»] scaffold0908 (1 HSPs)
scaffold0908 (96-149)||(4461-4514)
[»] scaffold0632 (1 HSPs)
scaffold0632 (150-203)||(210-263)
[»] scaffold0461 (1 HSPs)
scaffold0461 (150-203)||(12894-12947)
[»] scaffold0331 (1 HSPs)
scaffold0331 (177-206)||(11789-11818)
[»] scaffold0220 (1 HSPs)
scaffold0220 (96-149)||(2346-2399)
[»] scaffold0211 (1 HSPs)
scaffold0211 (98-139)||(19-60)
[»] scaffold0132 (2 HSPs)
scaffold0132 (150-203)||(29616-29669)
scaffold0132 (98-139)||(38627-38668)
[»] scaffold0122 (1 HSPs)
scaffold0122 (149-198)||(33490-33539)
[»] scaffold0084 (1 HSPs)
scaffold0084 (98-139)||(930-971)
[»] scaffold0075 (1 HSPs)
scaffold0075 (177-206)||(61236-61265)
[»] scaffold0010 (1 HSPs)
scaffold0010 (177-206)||(125975-126004)
[»] scaffold0008 (1 HSPs)
scaffold0008 (150-195)||(72928-72973)
[»] scaffold0671 (1 HSPs)
scaffold0671 (177-205)||(7548-7576)
[»] scaffold0436 (2 HSPs)
scaffold0436 (150-190)||(9363-9403)
scaffold0436 (150-190)||(13498-13538)
[»] scaffold0363 (1 HSPs)
scaffold0363 (150-198)||(10492-10540)
[»] scaffold0077 (1 HSPs)
scaffold0077 (177-205)||(6302-6330)
[»] scaffold0019 (1 HSPs)
scaffold0019 (152-196)||(159031-159075)
[»] scaffold0001 (2 HSPs)
scaffold0001 (177-205)||(499397-499425)
scaffold0001 (150-206)||(502305-502361)


Alignment Details
Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 20597807 - 20597914
Alignment:
Q  42 ttcagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacat 141  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20597807 ttcagtgcccttgtcacttacacgagatttgtcactataatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaaccacat 20597906  T
Q  142 aggcaaga 149  Q
    ||||||||    
T  20597907 aggcaaga 20597914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 9802651 - 9802721
Alignment:
Q  79 taatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||    
T  9802651 taatcacacaagattacaattgctcaagcacataagcaagagacttcctatgctcaagcacacaagcaaga 9802721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 3779394 - 3779286
Alignment:
Q  41 gttcagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    ||||||| ||| ||||||||||  ||||||| ||||| |||||| ||| ||||||||||||||||||| |  ||||||| |||| |||||||||||||||    
T  3779394 gttcagtccccctgtcacttacatgagatttttcactataatcaaacatgattacaattgctcaagcaaacaagcaagatacttcctatgctcaagcaca 3779295  T
Q  141 taggcaaga 149  Q
     | ||||||    
T  3779294 caagcaaga 3779286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 17236005 - 17235949
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17236005 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 17235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 45846280 - 45846333
Alignment:
Q  153 aacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45846280 aacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 45846333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8472007 - 8471951
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  8472007 tgtaacgccctctttgaattatttgttttatttgattattttattgaatttagagtc 8471951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 12462971 - 12462930
Alignment:
Q  165 gaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12462971 gaattatttgttttatttgattattttattgagtttagagtc 12462930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8469945 - 8469889
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| |||||||||    
T  8469945 tgtaacgccatctttgaattatttgttttatttgattattttattgaatttagagtc 8469889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8941739 - 8941683
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  8941739 tgtaacaccctctttgaattatttgttttatttgattactttattgagtttagagtc 8941683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 14268584 - 14268640
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||  ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14268584 tgtaacgtcctctttgaattatttgttttatttgattattttattaagtttagagtc 14268640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 15304117 - 15304185
Alignment:
Q  81 atcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||| |||||||||||||||||||||||||  ||||||||||||  |||||||||||||| | ||||||    
T  15304117 atcacacaagattacaattgctcaagcacacaagcaagagacttcatatgctcaagcacacaagcaaga 15304185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 19416739 - 19416808
Alignment:
Q  51 cttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagag 120  Q
    |||||||||||   ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||    
T  19416739 cttgtcacttataagagatttttcactataatcacacaagattacaattgctcaagcacacaagcaagag 19416808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 12223130 - 12223046
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    ||||||| ||||| |||||| |||||||||||||||||||| ||||  ||||||||||||   || |||||||||| | ||||||    
T  12223130 gagatttttcactataatcacacaagattacaattgctcaaacacacaagcaagagactttaaatactcaagcacacaagcaaga 12223046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 5294104 - 5294158
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  5294104 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 5294158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 5295277 - 5295331
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  5295277 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 5295331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 5296450 - 5296504
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  5296450 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 5296504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 3387858 - 3387805
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  3387858 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 3387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 10500275 - 10500332
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  10500275 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 10500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 10505304 - 10505361
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  10505304 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 10505361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 9065008 - 9065084
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactta 125  Q
    |||||||||| |||  |||| || ||||| ||||||  ||||||||||||||||||||||||  ||||||| |||||    
T  9065008 cccttgtcacctacaagagacttttcactataatcactcaagattacaattgctcaagcacacaagcaagatactta 9065084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 15375581 - 15375633
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| ||||||||||    
T  15375581 atgtaacgccctctttgaattatttgatttattttattatttaattgagttta 15375633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 16812441 - 16812501
Alignment:
Q  51 cttgtcacttacgcgagatttgtcactgtaatcatacaa-gattacaattgctcaagcaca 110  Q
    ||||||||||||  ||||||| ||||| ||||||||||| |||||||||||||||| ||||    
T  16812441 cttgtcacttacaagagatttttcactataatcatacaaggattacaattgctcaaacaca 16812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 9762159 - 9762229
Alignment:
Q  79 taatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||| ||||||||||||||| | |||||||  ||||||||||||  |||||||||| ||| | ||||||    
T  9762159 taatcacacaagattacaattggttaagcacacaagcaagagacttcatatgctcaagtacacaagcaaga 9762229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 13870642 - 13870592
Alignment:
Q  148 gatgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  13870642 gatgtaacgccctctttgaattatttgatttatttaattatttaattgagt 13870592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 16411456 - 16411490
Alignment:
Q  90 gattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||||||||||||||||| |||||||||||||    
T  16411456 gattacaattgctcaagcacaatagcaagagactt 16411490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 29051790 - 29051832
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttta 192  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  29051790 tgtaacgctctctttgaattatttgatttatttgattgtttta 29051832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 2501654 - 2501605
Alignment:
Q  91 attacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    ||||||||||||||||||||  ||||||||| || |||||||||| ||||    
T  2501654 attacaattgctcaagcacacaagcaagagattttctatgctcaaacaca 2501605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 4072182 - 4072153
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  4072182 ttatttgattattttattgagtttagagtc 4072153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 8755821 - 8755850
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  8755821 ttatttgattattttattgagtttagagtc 8755850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 9944683 - 9944736
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  9944683 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 9944736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 10062534 - 10062587
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| ||||||||||| |||||||| ||||||| ||||||| ||||    
T  10062534 tgtaacgccctctttgaattatttcttttatttaattatttaattgagtctaga 10062587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 14317172 - 14317225
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  14317172 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 14317225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 14947987 - 14948036
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  14947987 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14948036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18431994 - 18431941
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  18431994 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18431941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 23556740 - 23556711
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  23556740 ttatttgattattttattgagtttagagtc 23556711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 1878947 - 1878895
Alignment:
Q  73 tcactgtaatcatacaagattacaattgctcaagcacattagcaagagactta 125  Q
    ||||| |||||| | |||||||||||| ||||||||||  |||||||||||||    
T  1878947 tcactataatcacataagattacaatttctcaagcacagaagcaagagactta 1878895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 10658523 - 10658551
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  10658523 ttatttgattattttattgagtttagagt 10658551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 13263306 - 13263354
Alignment:
Q  101 ctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||| ||| ||||||||||||| ||||||||||||||| | ||||||    
T  13263306 ctcaagtacactagcaagagacttcctatgctcaagcacaaaagcaaga 13263354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 15203556 - 15203528
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  15203556 ttatttgattattttattgagtttagagt 15203528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 16233817 - 16233769
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  16233817 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16233769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 16411354 - 16411306
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  16411354 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 18008315 - 18008287
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  18008315 ttatttgattattttattgagtttagagt 18008287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 18959321 - 18959293
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  18959321 ttatttgattattttattgagtttagagt 18959293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 20383992 - 20384040
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  20383992 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20384040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 26354848 - 26354896
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  26354848 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 26354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 26357300 - 26357348
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  26357300 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 26357348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 36704252 - 36704280
Alignment:
Q  178 tatttgattattttattgagtttagagtc 206  Q
    |||||||||||||||||||||||||||||    
T  36704252 tatttgattattttattgagtttagagtc 36704280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 48274909 - 48274853
Alignment:
Q  147 agatgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||||  ||| |||||||||||||||||||| ||||||| ||| ||| ||||    
T  48274909 agatgtaacgtcctctttgaattatttgttttatttaattatttaattaagtctaga 48274853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 4981 - 5070
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagca 138  Q
    |||||||||||| |  ||||||| ||||| |||||||||||||||||||||||||||| |||  |||||||||||| |||||||||||||    
T  4981 cccttgtcacttgcaagagatttttcactataatcatacaagattacaattgctcaaggacacaagcaagagacttcctatgctcaagca 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 17879100 - 17879205
Alignment:
Q  44 cagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacatag 143  Q
    |||| ||||||||||||||  ||||||| |||   |||||| |||||||||||||||||||||||||  |||||||||||| | |||||||||||||||     
T  17879100 cagtccccttgtcacttacaagagatttttcataataatcacacaagattacaattgctcaagcacacaagcaagagactttcaatgctcaagcacataa 17879199  T
Q  144 gcaaga 149  Q
    ||||||    
T  17879200 gcaaga 17879205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 11361820 - 11361764
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11361820 tgtaacgtcctctttgaattatttgttttatttgattattttattgagtttagagtc 11361764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 17450386 - 17450442
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17450386 tgtaacgtcctctttgaattatttgttttatttgattattttattgagtttagagtc 17450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 25147424 - 25147368
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25147424 tgtaacaccctctttgaattatttgttttatttgattattttattgagtttagagtc 25147368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 38546921 - 38546977
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38546921 tgtaatgccctctttgaattatttgttttatttgattattttattgagtttagagtc 38546977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 5339694 - 5339750
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  5339694 atgtaacgccctctttgaattatttgttt-atttgattattttattgagtttagagtc 5339750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 17687439 - 17687498
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||| ||||| |||||| | |||||||||||||||||||||||  ||||||||||||    
T  17687439 gagatttttcactataatcacataagattacaattgctcaagcacacaagcaagagactt 17687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 24498801 - 24498726
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||  ||||||| ||||   |||||||||||||    
T  24498801 gagattttccactataatcacacaagattacaattgctcaagcacacaagcaagatacttcaaatgctcaagcaca 24498726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 15598255 - 15598337
Alignment:
Q  44 cagtgcccttgtcacttacgcgagatttgtc-actgtaatcatacaagattacaattgctcaagcacattagcaagagactta 125  Q
    |||| ||||||||||||||  ||||||| |  ||| |||||| ||||||||||||||| |||||||||  |||||||||||||    
T  15598255 cagttcccttgtcacttacaagagatttttttactataatcacacaagattacaattggtcaagcacacaagcaagagactta 15598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 26220965 - 26220917
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  26220965 tgtaacgccctctttgaattatttgttttatttaattatttaattgagt 26220917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 24484917 - 24484963
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattg 195  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  24484917 atgtaacgccctctttgaattatttgttttatttaattatttaattg 24484963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 24634828 - 24634882
Alignment:
Q  86 acaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    |||||||||||| | ||||||||||  || ||||||||| |||||||||||||||    
T  24634828 acaagattacaaattctcaagcacacaagtaagagacttcctatgctcaagcaca 24634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 32123054 - 32123000
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  32123054 taacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 32123000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 19700540 - 19700511
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  19700540 ttatttgattattttattgagtttagagtc 19700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 20045065 - 20045118
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  20045065 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 20045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 21287923 - 21287964
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  21287923 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 21287964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 22583332 - 22583361
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  22583332 ttatttgattattttattgagtttagagtc 22583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 23948643 - 23948614
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  23948643 ttatttgattattttattgagtttagagtc 23948614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 39835327 - 39835274
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||| ||||||||||| ||||| | ||||||||    
T  39835327 tgtaacgccctctttgaattatttgatttatttgattgttttaataagtttaga 39835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 45568548 - 45568507
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  45568548 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 45568507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 5609487 - 5609535
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||  |||||||||| ||||||||||||||||||    
T  5609487 tgtaacgccctctttgaaacatttgttttagttgattattttattgagt 5609535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 14408313 - 14408361
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  14408313 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14408361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 18676930 - 18676978
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  18676930 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 18676978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 17439 - 17539
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaag 148  Q
    ||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||| ||  |  ||||||||| ||||||||||||||||| |||||    
T  17439 cccttgtcacttacaagagatttttcactataatcacacaagattacaattgctcaagcgcacaaaaaagagactttctatgctcaagcacataagcaag 17538  T
Q  149 a 149  Q
    |    
T  17539 a 17539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 153070 - 153014
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  153070 tgtaacgctctctttgaattatttgttttatttgattattttattgagtttagagtc 153014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 168 - 202
Alignment:
Q  90 gattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||||||||||||||||| |||||||||||||    
T  168 gattacaattgctcaagcacaatagcaagagactt 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 66 - 18
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  66 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 33240175 - 33240259
Alignment:
Q  41 gttcagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactta 125  Q
    ||||||| ||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||||||  |||||||||||||    
T  33240175 gttcagtccccttgtcacttacaagagatttttcactataatcacacaagattacaattgctcaagcacacaagcaagagactta 33240259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 33248096 - 33248180
Alignment:
Q  41 gttcagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactta 125  Q
    ||||||| ||||||||||||||  ||||||| ||||| |||||| |||||||||||||||||||||||||  |||||||||||||    
T  33248096 gttcagtccccttgtcacttacaagagatttttcactataatcacacaagattacaattgctcaagcacacaagcaagagactta 33248180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24672280 - 24672224
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24672280 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 24672224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 22172655 - 22172709
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22172655 atgtaacgccctctttgaattatttgttttatttgattattttattgagtttaga 22172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 20320614 - 20320670
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  20320614 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaaagtc 20320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 22611685 - 22611741
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  22611685 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaaagtc 22611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 23705894 - 23705950
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  23705894 tgtaacgccctctttgaattatttgttttatttgattattttattgagtatagagtc 23705950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 23932886 - 23932830
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  23932886 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaaagtc 23932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 16735622 - 16735548
Alignment:
Q  50 ccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    |||||||||||||  ||||||| ||||| |||||| ||||||||||||||||| |||||||  ||||||||||||    
T  16735622 ccttgtcacttacaagagatttttcactataatcacacaagattacaattgcttaagcacacaagcaagagactt 16735548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 40203020 - 40202959
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcaca 110  Q
    ||||||||||||||  ||||||| ||||| |||||| ||||||||||||||| |||||||||    
T  40203020 cccttgtcacttacatgagatttttcactataatcacacaagattacaattgttcaagcaca 40202959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 22106628 - 22106574
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  22106628 tgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 22106574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 26393702 - 26393648
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||| ||||| ||||    
T  26393702 atgtaacgccctctttgaattatttgatttatttgattattttaatgagtctaga 26393648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24919441 - 24919385
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  24919441 tgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 24919385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 23134626 - 23134575
Alignment:
Q  147 agatgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  23134626 agatgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23134575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 25918228 - 25918286
Alignment:
Q  91 attacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    ||||||| ||||||||||||  |||||||||  ||||||||||||||||| | ||||||    
T  25918228 attacaaatgctcaagcacacaagcaagagatctactatgctcaagcacaaaagcaaga 25918286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 29602470 - 29602416
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  29602470 tgtaacgccctctttgaagtatttgttttatttgattatttttaatgagtttaga 29602416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 25046499 - 25046470
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  25046499 ttatttgattattttattgagtttagagtc 25046470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 28578394 - 28578349
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattg 195  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  28578394 tgtaacgccctctttgaattatttgttttatttaattatttaattg 28578349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 34401393 - 34401442
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  34401393 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 34401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 45026881 - 45026934
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  45026881 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 45026934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 18810237 - 18810189
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||| | ||| |||||||||||||||||||| ||||||| |||||||    
T  18810237 tgtaacaccctctttgaattatttgttttatttaattatttaattgagt 18810189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 23132156 - 23132108
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  23132156 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23132108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 23136861 - 23136813
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  23136861 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23136813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 24941973 - 24941933
Alignment:
Q  163 ttgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||||||||||||||| ||||||| ||||||| ||||    
T  24941973 ttgaattatttgttttatttaattatttaattgagtctaga 24941933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 26506670 - 26506622
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  26506670 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 26506622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 26509147 - 26509099
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  26509147 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 26509099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 27919635 - 27919683
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  27919635 tgtaacgccctctttgaattatttgatttatttcattatttaattgagt 27919683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 39683610 - 39683562
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  39683610 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 39683562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 776 - 833
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  776 atgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 6413 - 6469
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6413 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 6469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 30134 - 30190
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30134 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 30190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 60964 - 60908
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  60964 tgtaacgccctctttgaatcatttattttatttgattattttattgagtttagagtc 60908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 107834 - 107778
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  107834 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 107778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 116335 - 116279
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  116335 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 116279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 387286 - 387342
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  387286 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 387342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 3e-19; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 15488954 - 15489010
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15488954 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 15489010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 52871205 - 52871149
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52871205 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 52871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 14826766 - 14826820
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14826766 taacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 14826820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 1604188 - 1604244
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  1604188 tgtaacgccctctttgaattattttttttatttgattattttattgagtttagagtc 1604244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 15480499 - 15480555
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  15480499 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaaagtc 15480555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 23802003 - 23802055
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttag 202  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  23802003 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttag 23802055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 24619141 - 24619225
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||  ||||||||||||   ||||||||||||| | ||||||    
T  24619141 gagatttttcactttaatcacacaagattacaattgctcaagcacacaagcaagagactttaaatgctcaagcacaaaagcaaga 24619225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 14745175 - 14745218
Alignment:
Q  163 ttgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14745175 ttgaattatttgttttatttgattattttattgagtttagagtc 14745218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 19858971 - 19858915
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||    
T  19858971 tgtaacgccctctctgaattatttgttttatttgattattctattgagtttagagtc 19858915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 19243986 - 19243927
Alignment:
Q  145 caagatgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  19243986 caagatgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 19243927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 55990683 - 55990637
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattga 196  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  55990683 tgtaacgccctctttgaattatttgttttatttgattattttattga 55990637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 14827135 - 14827079
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| | ||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  14827135 tgtaacaccctctttgaattatctgttttatttgattatattattgagtttagagtc 14827079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 54797525 - 54797579
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  54797525 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 54797579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 14281665 - 14281612
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  14281665 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtgtaga 14281612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 44616581 - 44616528
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  44616581 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 44616528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 363669 - 363613
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  363669 tgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 363613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 44771967 - 44772015
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  44771967 tgtaacgccctctttgaattatttgttttatttaattatttaattgagt 44772015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 44432059 - 44432008
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| ||||||||||    
T  44432059 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 44432008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 5902223 - 5902137
Alignment:
Q  52 ttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagca 138  Q
    |||||||||||   |||||| ||||| | || | ||||||||||||||| |||||||||  ||||||| |||| | |||||||||||    
T  5902223 ttgtcacttacaatagatttttcactattattacacaagattacaattgttcaagcacacaagcaagaaacttccaatgctcaagca 5902137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 15193199 - 15193265
Alignment:
Q  44 cagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcaca 110  Q
    |||| ||||||||||||||  || |||| | ||| |||||| ||||||||||||||||| |||||||    
T  15193199 cagtccccttgtcacttacaagaaattttttactataatcacacaagattacaattgcttaagcaca 15193265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 44927546 - 44927600
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||| ||||||||||| ||||| | ||||||||    
T  44927546 atgtaacgccctctttgaattatttgatttatttgattgttttaataagtttaga 44927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 21566 - 21537
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  21566 ttatttgattattttattgagtttagagtc 21537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 14872956 - 14873009
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||| || ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  14872956 tgtaatgccctctttgaattatttgttttatttaattatttaattgagtctaga 14873009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 15613472 - 15613443
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  15613472 ttatttgattattttattgagtttagagtc 15613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 18238481 - 18238534
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  18238481 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18238534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 1836388 - 1836436
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  1836388 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 1836436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 7640055 - 7640103
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  7640055 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 7640103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 10328971 - 10328915
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagaga 121  Q
    ||||||| ||||| |||||| |||||||||||| |||| |||||||  |||||||||    
T  10328971 gagatttttcactataatcacacaagattacaaatgctaaagcacacaagcaagaga 10328915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 14717588 - 14717636
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  14717588 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 14717636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 18214181 - 18214233
Alignment:
Q  151 gtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||| ||| |||||||||||| ||||||||||| ||| ||||||| ||||    
T  18214181 gtaacgccctctttgaattatttgatttatttgattgtttaattgagtctaga 18214233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 25093309 - 25093281
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  25093309 ttatttgattattttattgagtttagagt 25093281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 27997168 - 27997140
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  27997168 ttatttgattattttattgagtttagagt 27997140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 29268649 - 29268601
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  29268649 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 29268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 51993943 - 51993915
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  51993943 ttatttgattattttattgagtttagagt 51993915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 20629014 - 20629070
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20629014 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 20629070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 12118596 - 12118650
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12118596 taacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 12118650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 17681620 - 17681563
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  17681620 atgtaacgccctctttgaattatttgttttatttgattattttatttagtttagagtc 17681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 19431951 - 19431878
Alignment:
Q  51 cttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||| |||  ||||||||||||    
T  19431951 cttgtcacttacacgagatttttcactataatcacacaagattacaattgctcaagaacacaagcaagagactt 19431878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 24514739 - 24514686
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24514739 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttaga 24514686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 55318198 - 55318254
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  55318198 tgtaacgccttctttgaattatttgttttatttgattattttattgagtttagagtc 55318254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 16854173 - 16854229
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  16854173 tgtaacgccctctttgaattatttgttttatttaattatttgattgagtttagagtc 16854229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 22792570 - 22792517
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||| |||||||||||||||||||||||    
T  22792570 tgtaacgccctctttgaaatatttgttttagttgattattttattgagtttaga 22792517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 1463816 - 1463872
Alignment:
Q  68 atttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||  ||||||||||||    
T  1463816 atttttcactataatcatgcaagattacaattgctcaagcacacaagcaagagactt 1463872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 7921387 - 7921292
Alignment:
Q  44 cagtgcccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    |||| ||||||||||||||  ||||||| ||||| ||||||  || ||||| || ||||||||||||  ||||||||||||  ||||||||||||||    
T  7921387 cagtccccttgtcacttacaagagatttttcactataatcaatca-gattataaatgctcaagcacacaagcaagagacttcatatgctcaagcaca 7921292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 17769685 - 17769626
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||  |||| |||||||    
T  17769685 gagatttttcactataatcacacaagattacaattgctcaagcacacaagcatgagactt 17769626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 19070986 - 19070927
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||  |||| |||||||    
T  19070986 gagatttttcactataatcacacaagattacaattgctcaagcacacaagcatgagactt 19070927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 19225269 - 19225344
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagactt 124  Q
    ||||||||| ||||  ||||||| ||||  |||||| |||||||||||||||||||||||||  ||||||| ||||    
T  19225269 cccttgtcatttacaagagatttttcaccataatcaaacaagattacaattgctcaagcacacaagcaagaaactt 19225344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 55477782 - 55477729
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  55477782 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 55477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 16093923 - 16093990
Alignment:
Q  73 tcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    ||||| |||||| ||||||||||||| |||||||||||   |||| ||| || |||||||||||||||    
T  16093923 tcactataatcacacaagattacaatcgctcaagcacacatgcaaaagaatttctatgctcaagcaca 16093990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 45862223 - 45862180
Alignment:
Q  96 aattgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  45862223 aattgctcaagcacacaagcaagagacttcctatgctcaagcac 45862180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 1864036 - 1864090
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  1864036 tgtaacgccctctttgaattatttgttttattcgattatttttaatgagtttaga 1864090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 29171531 - 29171585
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||| ||||||||||| ||||| | ||||||||    
T  29171531 atgtaacgccctctttgaattatttgatttatttgattgttttaataagtttaga 29171585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 54587320 - 54587270
Alignment:
Q  153 aacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  54587320 aacgccctctttgaattatttgttttatttaattatttaattgagtctaga 54587270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 12277179 - 12277150
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  12277179 ttatttgattattttattgagtttagagtc 12277150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 13953758 - 13953811
Alignment:
Q  96 aattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||||||||||||  |||||||||||| || |||||||||||| | ||||||    
T  13953758 aattgctcaagcacacaagcaagagacttcctttgctcaagcacacaagcaaga 13953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 13953790 - 13953831
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  13953790 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 13953831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 15978827 - 15978774
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  15978827 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 15978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 7780222 - 7780270
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  7780222 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 7780270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 21619797 - 21619749
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  21619797 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21619749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 27166440 - 27166392
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  27166440 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 27166392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 28847487 - 28847535
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  28847487 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 28847535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 34160619 - 34160571
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  34160619 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 34160571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 41125126 - 41125078
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| ||||||||||| |||||||| ||||||| |||||||    
T  41125126 tgtaacgccctctttgaattatttattttatttaattatttaattgagt 41125078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 43543978 - 43543922
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43543978 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 43543922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 18515486 - 18515560
Alignment:
Q  66 agatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcaca 140  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||  ||||| |||||| |||||||||||||||    
T  18515486 agatttttcactataatcacacaagattacaattgctcaagcacacaagcaaaagactttctatgctcaagcaca 18515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 20943762 - 20943818
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  20943762 tgtaacgccctctttgaattatttgttttatttgattattttattgaggttagagtc 20943818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 34771076 - 34771020
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  34771076 tgtaacgccttctttgaattatttgttttatttgattattttattgagtttagagtc 34771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 37525007 - 37524951
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  37525007 tgtaacgccctctttgaactatttgttttatttgattattttattgagtttagagtc 37524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 23917304 - 23917394
Alignment:
Q  50 ccttgtcacttacgcgagatttgt--cactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagca 138  Q
    |||||||||||||  ||||||| |  |||| |||||| |||||||||||||||||||||||||  ||||||||||||  ||||||||||||    
T  23917304 ccttgtcacttacaagagatttttttcactataatcacacaagattacaattgctcaagcacacaagcaagagacttcttatgctcaagca 23917394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 21506638 - 21506581
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  21506638 atgtaacgtcctctttgaattatttgttttattttattattttattgagtttagagtc 21506581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 42314334 - 42314386
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  42314334 atgtaacgccctctttgaattatttgttttatttgattattttatttagttta 42314386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 25398861 - 25398938
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacata 142  Q
    ||||||| |||||  ||||| |||||||||||||||||||||||||  |  || |||||| |||||||||||||||||    
T  25398861 gagatttttcactacaatcacacaagattacaattgctcaagcacacaactaaaagacttcctatgctcaagcacata 25398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 16402320 - 16402269
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    |||||||| ||  |||||||||||||||||||||||||||||| ||||||||    
T  16402320 tgtaacgccctgtttgaattatttgttttatttgattattttaatgagttta 16402269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 1573585 - 1573638
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  1573585 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 1573638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 12759279 - 12759226
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  12759279 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 12759226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 13990159 - 13990106
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  13990159 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 13990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 29299542 - 29299485
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    ||||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  29299542 atgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 29299485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 49262398 - 49262345
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||| |||||||||||| ||||||||||    
T  49262398 tgtaacgccctctttgaaatatttgttttagttgattattttaatgagtttaga 49262345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 21737625 - 21737669
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttatt 194  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||    
T  21737625 tgtaacaccctctttgaattatttgttttatttgattattttatt 21737669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 22049888 - 22049944
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  22049888 tgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 22049944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 21543563 - 21543606
Alignment:
Q  96 aattgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||||  |||||||||||| ||||||||||||||    
T  21543563 aattgctcaagcacacaagcaagagactttctatgctcaagcac 21543606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 21441025 - 21440971
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  21441025 tgtaacgccctctttgaagtatttgttttatttgattatttttaatgagtttaga 21440971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 23592612 - 23592666
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  23592612 tgtaacgccctctttgaattatttgttttattcgattatttttaatgagtttaga 23592666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 47194833 - 47194883
Alignment:
Q  99 tgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||||||||||  ||||||| ||| | ||||||||||||||||||||||    
T  47194833 tgctcaagcacataggcaagagtcttccaatgctcaagcacataggcaaga 47194883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 16274228 - 16274281
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| ||||||| ||||    
T  16274228 tgtaacgccctctttgaattatttgatttatttaattatttaattgagtctaga 16274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 21473952 - 21474001
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  21473952 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 24727747 - 24727718
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  24727747 ttatttgattattttattgagtttagagtc 24727718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 27161024 - 27161065
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttt 191  Q
    ||||||||  || |||||||||||||||||||||||||||||    
T  27161024 tgtaacgcattctttgaattatttgttttatttgattatttt 27161065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 29777921 - 29777872
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  29777921 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 29777872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 44821702 - 44821731
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  44821702 ttatttgattattttattgagtttagagtc 44821731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 9044172 - 9044220
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  9044172 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 9044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 12945667 - 12945619
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  12945667 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 12945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 16363213 - 16363165
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  16363213 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 16363165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 21842065 - 21842017
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  21842065 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 21842017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 22639744 - 22639827
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    ||||||| ||||| |||||  ||||||||| |||| ||||||||||  ||||||||||||   ||||||||||||| | ||||||    
T  22639744 gagatttttcactataatcgcacaagatta-aattactcaagcacacaagcaagagacttcaaatgctcaagcacaaaagcaaga 22639827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 1425 - 1480
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagt 205  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  1425 tgtaacgccctctttgaattatttgttttatttgattattttattgagtttagagt 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 12078309 - 12078407
Alignment:
Q  50 ccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||||||||||  ||||||| ||||| |||| |  ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| | ||||||    
T  12078309 ccttgtcacttacaagagatttttcactataattac-caagattacaattgctcaagcacacaagcaagagacttcctatgctcaagcacacaagcaaga 12078407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 24474366 - 24474310
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  24474366 tgtaacgccctctttgaattatttgttttatttgattattttattaagtttagagtc 24474310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 26119260 - 26119189
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaag 136  Q
    ||||||| ||||| |||||| ||||||||||||||||||||| |||| || |||||||||  ||||||||||    
T  26119260 gagatttttcactataatcacacaagattacaattgctcaagaacataagaaagagactttttatgctcaag 26119189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 41860242 - 41860283
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttt 191  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  41860242 tgtaacgccctctttgaattatttgttttatttgattatttt 41860283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 11580135 - 11580190
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagt 205  Q
    |||||||| ||| |||||||| ||| ||||||||||| ||||| ||||||||||||    
T  11580135 tgtaacgccctctttgaattacttgatttatttgattgttttaatgagtttagagt 11580190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 21574049 - 21573995
Alignment:
Q  143 ggcaagatgtaacgctctcattgaattatttgttttatttgattattttattgag 197  Q
    ||||||||||||| | ||| |||||||||||| ||||||| ||||||||| ||||    
T  21574049 ggcaagatgtaacaccctctttgaattatttgatttatttaattattttaatgag 21573995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 31062618 - 31062564
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||  ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  31062618 tgtaacgtcctctttgaattatttgttttatttgattatttttaatgagtttaga 31062564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 36315826 - 36315772
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||||||||||||||||| ||||| ||||| ||||||||||    
T  36315826 tgtaacgccctctttgaattatttgttttattcgattatttttaatgagtttaga 36315772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 41094487 - 41094541
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  41094487 tgtaacgccctctttgaagtatttgttttatttgattatttttaatgagtttaga 41094541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Original strand, 32160273 - 32160314
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  32160273 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 32160314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 20910308 - 20910260
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  20910308 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20910260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 23065751 - 23065703
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  23065751 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 23065703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 29331283 - 29331231
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttag 202  Q
    |||||||| ||| |||||||||||| ||||||||||| ||||| | |||||||    
T  29331283 tgtaacgccctctttgaattatttgatttatttgattgttttaataagtttag 29331231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 273 - 215
Alignment:
Q  148 gatgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  273 gatgtaacgccctctttgaattatttattttatttgattattttattgagtttagagtc 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 23576 - 23630
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23576 taacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 23630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 23945 - 23889
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| | ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  23945 tgtaacaccctctttgaattatttgttttatttgattatattattgagtttagagtc 23889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 21116 - 21062
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21116 taacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 21062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 12943 - 12889
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12943 taacgccctctttgaattatttgttttatttgattattttattgagtttagagtc 12889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 12574 - 12630
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||| | ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  12574 tgtaacaccctctttgaattatttgttttatttgattatattattgagtttagagtc 12630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 12183569 - 12183480
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagca 138  Q
    ||||||||||||||  ||||||| | ||| ||||||||||||||||||||||||||  ||||  |||||||||||| | |||||||||||    
T  12183569 cccttgtcacttacaagagattttttactataatcatacaagattacaattgctcagccacacaagcaagagactttcaatgctcaagca 12183480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 15876918 - 15876864
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagag 204  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  15876918 tgtaacgccctctttgagttatttgttttatttgattattttattgagtttagag 15876864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18318136 - 18318083
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||| | ||| |||||||||||||||||||||||||||||| ||||||||||    
T  18318136 tgtaacaccctctttgaattatttgttttatttgattattttaatgagtttaga 18318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 20184131 - 20184076
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagt 205  Q
    |||||||| ||| |||||| ||||| ||||||||| ||||||||||||||||||||    
T  20184131 tgtaacgccctctttgaatcatttgatttatttgagtattttattgagtttagagt 20184076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 22151860 - 22151915
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagt 205  Q
    |||||||| ||| |||||| ||||| ||||||||| ||||||||||||||||||||    
T  22151860 tgtaacgccctctttgaatcatttgatttatttgagtattttattgagtttagagt 22151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 21738518 - 21738572
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  21738518 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 21738572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 15738497 - 15738444
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  15738497 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 15738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 23531550 - 23531603
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  23531550 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 23531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 23540370 - 23540317
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||| |||||||||||| |||| ||||||||||    
T  23540370 tgtaacgccctctttgaattatttgatttatttgattactttaatgagtttaga 23540317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 8056323 - 8056272
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| ||||||||||    
T  8056323 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 8056272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 4642739 - 4642793
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  4642739 tgtaacaccctctttgaattatttgttttatttgattatttttaatgagtttaga 4642793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18324199 - 18324145
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||| ||||||||||    
T  18324199 tgtaacgccctccttgaattatttgttttattttattatttttaatgagtttaga 18324145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 3850660 - 3850713
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||  |||||||||||||||||||| ||||||| ||||||| ||||    
T  3850660 tgtaacgccctttttgaattatttgttttatttaattatttaattgagtctaga 3850713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 4971477 - 4971530
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  4971477 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 4971530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 12041304 - 12041333
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  12041304 ttatttgattattttattgagtttagagtc 12041333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 13242687 - 13242740
Alignment:
Q  49 cccttgtcacttacgcgagatttgtcactgtaatcatacaagattacaattgct 102  Q
    ||||||||||||||  ||||||| ||||  |||||| |||||||||||||||||    
T  13242687 cccttgtcacttacaagagatttttcacaataatcacacaagattacaattgct 13242740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 15741277 - 15741224
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||| | ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  15741277 tgtaacaccctctttgaattatttgttttatttaattatttaattgagtctaga 15741224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 16198790 - 16198737
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  16198790 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 16198737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 17882365 - 17882418
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  17882365 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 17882418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 18179688 - 18179635
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  18179688 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 18179635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 31720277 - 31720232
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcaca 110  Q
    ||||||| ||||| |||||| ||||||||||||||| |||||||||    
T  31720277 gagatttttcactataatcacacaagattacaattgttcaagcaca 31720232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 31731558 - 31731587
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  31731558 ttatttgattattttattgagtttagagtc 31731587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 33865572 - 33865523
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  33865572 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33865523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 2290046 - 2290094
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  2290046 tgtaacgcactctttgaattatttgatttatttaattatttaattgagt 2290094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 14757808 - 14757891
Alignment:
Q  65 gagatttgtcactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||| ||  ||||||||||||   || |||||||||| | ||||||    
T  14757808 gagatttttcactataatcacacaagattacaaatgctcaagc-cacaagcaagagacttcaaatactcaagcacacaagcaaga 14757891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 15900261 - 15900305
Alignment:
Q  148 gatgtaacgctctcattgaattatttgttttatttgattatttta 192  Q
    |||||||||| ||| |||||||||||| ||||||||||| |||||    
T  15900261 gatgtaacgccctctttgaattatttgatttatttgattgtttta 15900305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 19102119 - 19102159
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattt 190  Q
    |||||||| ||| |||||||||||||||||||| |||||||    
T  19102119 tgtaacgccctctttgaattatttgttttatttaattattt 19102159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 20104455 - 20104503
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  20104455 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 20104503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 24549841 - 24549869
Alignment:
Q  178 tatttgattattttattgagtttagagtc 206  Q
    |||||||||||||||||||||||||||||    
T  24549841 tatttgattattttattgagtttagagtc 24549869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 25753803 - 25753751
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||| ||| ||||||||||||||| ||||||||| ||||| ||||||||||    
T  25753803 taacgccctctttgaattatttgtttgatttgattatttttaatgagtttaga 25753751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 33863090 - 33863042
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  33863090 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 46120 - 46176
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46120 tgtaacgtcctctttgaattatttgttttatttgattattttattgagtttagagtc 46176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 1704 - 1805
Alignment:
Q  49 cccttgtcacttacgcgagatttgt-cactgtaatcatacaagattacaattgctcaagcacattagcaagagacttactatgctcaagcacataggcaa 147  Q
    ||||||||||||||  ||||||| | |||| |||||| ||||||||||||||||| ||| |||  |||||| ||||| ||||||||||||||| | ||||    
T  1704 cccttgtcacttacaagagattttttcactataatcacacaagattacaattgcttaagaacacaagcaagcgacttcctatgctcaagcacaaaagcaa 1803  T
Q  148 ga 149  Q
    ||    
T  1804 ga 1805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 11242 - 11185
Alignment:
Q  148 gatgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagt 205  Q
    |||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||    
T  11242 gatgtaacgccctctttgaattatttattttatttaattattttattgagtttagagt 11185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 5928 - 5980
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttag 202  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  5928 tgtaacgccctctttgaattatttgttttacttgattattttattgagtttag 5980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 202
Target Start/End: Original strand, 10331 - 10383
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttag 202  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  10331 tgtaacgccctctttgaattatttgttttacttgattattttattgagtttag 10383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 19646 - 19702
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  19646 tgtaacgccctctttgaattatttgttttatttggttattttattgaatttagagtc 19702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 28325 - 28381
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  28325 tgtaacgccctctttgaattatttgttttatttggttattttattgaatttagagtc 28381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 11356 - 11316
Alignment:
Q  163 ttgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11356 ttgaattatttgttttatttgattattttattgagtttaga 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 9299 - 9346
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgag 197  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  9299 tgtaacgccctctttgaattatttgttttatttgattattttattgag 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 22034 - 21975
Alignment:
Q  145 caagatgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||||    
T  22034 caagatgtaacgccctctttgaattatttgttttatttgattatttttaatgagtttaga 21975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 1453 - 1400
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||  |||||||||||||||||||||||||||||| ||||||||||    
T  1453 tgtaacgccctttttgaattatttgttttatttgattattttaatgagtttaga 1400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 22333 - 22386
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||| | ||| |||||||||||||||||||||||||||||| ||||||||||    
T  22333 tgtaacaccctctttgaattatttgttttatttgattattttaatgagtttaga 22386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 20156 - 20210
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgatta-ttttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||| ||||||||||    
T  20156 tgtaacgccctccttgaattatttgttttattttattatttttaatgagtttaga 20210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 15242 - 15193
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  15242 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 15193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 1964 - 1912
Alignment:
Q  154 acgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||| ||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  1964 acgccctctttgaattatttgttttatttgattcttttatcgagtttagagtc 1912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 9749 - 9804
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  9749 tgtaacgccctctttgaattatttattttattt-attattttattgagtttagagtc 9804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000007; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 137973 - 137919
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  137973 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 137919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 142911 - 142857
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  142911 atgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 142857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 135503 - 135450
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  135503 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 135450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 140441 - 140388
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  140441 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 140388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 145379 - 145326
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  145379 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 145326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 1232 - 1285
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| ||||| ||||||||||  |||||||||||||||||||||||    
T  1232 tgtaacgccctctttgaaatatttgttttggttgattattttattgagtttaga 1285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 6872 - 6819
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||| | ||| |||||||||||||||||||| ||||||| ||||||||||||    
T  6872 tgtaacaccctctttgaattatttgttttatttaattatttaattgagtttaga 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 16901 - 16954
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  16901 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 16954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 3987 - 3946
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttt 191  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  3987 tgtaacgccctctttgaattatttgttttatttgattatttt 3946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 18019 - 17978
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttt 191  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  18019 tgtaacgccctctttgaattatttgttttatttgattatttt 17978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 83378 - 83337
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatttt 191  Q
    |||||||| ||| |||||||||||||||||||||||||||||    
T  83378 tgtaacgccctctttgaattatttgttttatttgattatttt 83337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 55878 - 55931
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  55878 tgtaacgccctctttgaattatttgttttatttaattatttaattgagtctaga 55931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 1114 - 1061
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| | | ||||||||||||| ||| |||||||||||||||||||||||    
T  1114 tgtaacgcccactttgaattatttgtattacttgattattttattgagtttaga 1061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 7754 - 7698
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||| ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  7754 tgtaacgccctctttgaattatttgttttatttatttatttatttgagtttagagtc 7698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0970 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 1203 - 1152
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagttta 201  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| ||||||||||    
T  1203 tgtaacgccctctttgaattatttgatttatttaattatttaattgagttta 1152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1327 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 136 - 82
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattatt-ttattgagtttaga 203  Q
    |||||||| ||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  136 tgtaacgccctctttgaattatttattttatttgattattgttaatgagtttaga 82  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 5084 - 5134
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagttt 200  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| |||||||||    
T  5084 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagttt 5134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 117848 - 117798
Alignment:
Q  148 gatgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||||| ||| |||||||||||||||||||| ||| ||| |||||||    
T  117848 gatgtaacgccctctttgaattatttgttttatttaattttttaattgagt 117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 4514 - 4461
Alignment:
Q  96 aattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||||||||||||  |||||||||||| || |||||||||||| | ||||||    
T  4514 aattgctcaagcacacaagcaagagacttcctttgctcaagcacacaagcaaga 4461  T

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Target: scaffold0632 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 263 - 210
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||||||| ||| ||| ||||||| ||||    
T  263 tgtaacgccctctttgaattatttgttttatttaattgtttaattgagtctaga 210  T

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Target: scaffold0461 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 12947 - 12894
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| ||||||| ||||    
T  12947 tgtaacgccctctttgaattatttgatttatttaattatttaattgagtctaga 12894  T

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Target: scaffold0331 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 11789 - 11818
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  11789 ttatttgattattttattgagtttagagtc 11818  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 2399 - 2346
Alignment:
Q  96 aattgctcaagcacattagcaagagacttactatgctcaagcacataggcaaga 149  Q
    |||||||||||||||   ||||||||||| ||||||||||||||| | ||||||    
T  2399 aattgctcaagcacacaggcaagagacttcctatgctcaagcacacaagcaaga 2346  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 60 - 19
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  60 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 19  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 29669 - 29616
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttaga 203  Q
    |||||||| ||| |||||||||||||||| ||| ||||||| ||||||| ||||    
T  29669 tgtaacgccctctttgaattatttgttttgtttaattatttaattgagtctaga 29616  T

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Target: scaffold0132; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 38668 - 38627
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  38668 ttgctcaagcacacaagcaagagactttctatgctcaagcac 38627  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 33490 - 33539
Alignment:
Q  149 atgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    ||||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  33490 atgtaacgccctctttgaattatttgatttatttaattatttaattgagt 33539  T

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Target: scaffold0084 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 971 - 930
Alignment:
Q  98 ttgctcaagcacattagcaagagacttactatgctcaagcac 139  Q
    |||||||||||||  |||||||||||| ||||||||||||||    
T  971 ttgctcaagcacacaagcaagagacttcctatgctcaagcac 930  T

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Target: scaffold0075 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 61265 - 61236
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  61265 ttatttgattattttattgagtttagagtc 61236  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 206
Target Start/End: Original strand, 125975 - 126004
Alignment:
Q  177 ttatttgattattttattgagtttagagtc 206  Q
    ||||||||||||||||||||||||||||||    
T  125975 ttatttgattattttattgagtttagagtc 126004  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 72973 - 72928
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattg 195  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  72973 tgtaacgccctctttgaattatttgttttatttaattatttaattg 72928  T

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Target: scaffold0671 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 7576 - 7548
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  7576 ttatttgattattttattgagtttagagt 7548  T

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Target: scaffold0436 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 9403 - 9363
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattt 190  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  9403 tgtaacgccctctttgaattatttgatttatttgattattt 9363  T

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Target: scaffold0436; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 13538 - 13498
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattt 190  Q
    |||||||| ||| |||||||||||| |||||||||||||||    
T  13538 tgtaacgccctctttgaattatttgatttatttgattattt 13498  T

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Target: scaffold0363 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 10540 - 10492
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagt 198  Q
    |||||||| ||| |||||||||||| ||||||| ||||||| |||||||    
T  10540 tgtaacgccctctttgaattatttgatttatttaattatttaattgagt 10492  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 6330 - 6302
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  6330 ttatttgattattttattgagtttagagt 6302  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 159075 - 159031
Alignment:
Q  152 taacgctctcattgaattatttgttttatttgattattttattga 196  Q
    |||||||||| |||||||||||||||||||| ||| ||| |||||    
T  159075 taacgctctctttgaattatttgttttatttaattgtttaattga 159031  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 499425 - 499397
Alignment:
Q  177 ttatttgattattttattgagtttagagt 205  Q
    |||||||||||||||||||||||||||||    
T  499425 ttatttgattattttattgagtttagagt 499397  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 502361 - 502305
Alignment:
Q  150 tgtaacgctctcattgaattatttgttttatttgattattttattgagtttagagtc 206  Q
    |||||||  ||| ||||||||||||||||||||  ||||||  ||||||||||||||    
T  502361 tgtaacgtcctctttgaattatttgttttatttatttatttatttgagtttagagtc 502305  T

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