View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3951_high_9 (Length: 236)
Name: NF3951_high_9
Description: NF3951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3951_high_9 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 47760451 - 47760577
Alignment:
| Q |
94 |
caacattcttagattgtgatatccaatggatggattcttcaagatcggtttcatggtgtgtgggttgaatggtaacataagcaggtttagaagaaaagtg |
193 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47760451 |
caacatacttagattgtgatatccaatggatggattcttcaaggtcggtttcatggtgtgtgggttgaatggtaacataagcaggtttagaagaaaagtg |
47760550 |
T |
|
| Q |
194 |
gttttgacgtttggaagaagaaaaaca |
220 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
47760551 |
gttttgacgtttggaagaagaaaaaca |
47760577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University