View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3951_low_13 (Length: 236)

Name: NF3951_low_13
Description: NF3951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3951_low_13
NF3951_low_13
[»] chr4 (17 HSPs)
chr4 (1-185)||(47566748-47566941)
chr4 (1-62)||(36769735-36769796)
chr4 (1-64)||(36771652-36771715)
chr4 (1-62)||(4558566-4558627)
chr4 (1-62)||(15312576-15312637)
chr4 (3-62)||(15317219-15317278)
chr4 (1-62)||(8529528-8529588)
chr4 (1-62)||(15831406-15831466)
chr4 (1-62)||(18587226-18587286)
chr4 (1-58)||(4570349-4570404)
chr4 (1-62)||(7050137-7050196)
chr4 (188-222)||(47567001-47567035)
chr4 (1-62)||(4885130-4885190)
chr4 (1-62)||(11853824-11853885)
chr4 (3-62)||(16688806-16688864)
chr4 (1-62)||(16489609-16489669)
chr4 (1-64)||(4555925-4555986)
[»] chr6 (16 HSPs)
chr6 (1-64)||(12166008-12166071)
chr6 (1-62)||(5165705-5165766)
chr6 (1-62)||(13883733-13883794)
chr6 (2-61)||(33216087-33216146)
chr6 (1-62)||(3577350-3577410)
chr6 (1-62)||(13467330-13467391)
chr6 (1-58)||(17038495-17038551)
chr6 (1-62)||(19701769-19701829)
chr6 (1-62)||(25465766-25465826)
chr6 (1-62)||(31248556-31248616)
chr6 (1-62)||(17694713-17694773)
chr6 (1-62)||(25941928-25941988)
chr6 (1-64)||(16786193-16786254)
chr6 (1-56)||(13878997-13879051)
chr6 (1-55)||(30987375-30987427)
chr6 (1-57)||(26887094-26887149)
[»] chr7 (17 HSPs)
chr7 (1-62)||(44016526-44016587)
chr7 (1-62)||(44143734-44143793)
chr7 (1-59)||(42006919-42006977)
chr7 (1-62)||(7464377-7464437)
chr7 (1-62)||(25351611-25351671)
chr7 (1-62)||(25405673-25405733)
chr7 (1-62)||(30247230-30247291)
chr7 (1-58)||(44010619-44010676)
chr7 (1-56)||(3319888-3319942)
chr7 (1-56)||(3324656-3324710)
chr7 (1-56)||(15540863-15540917)
chr7 (1-51)||(2075365-2075415)
chr7 (1-57)||(7070055-7070109)
chr7 (1-60)||(21369899-21369958)
chr7 (1-39)||(8378390-8378428)
chr7 (1-62)||(25357305-25357366)
chr7 (1-64)||(34546742-34546803)
[»] chr3 (22 HSPs)
chr3 (1-64)||(7418317-7418380)
chr3 (1-62)||(3330148-3330209)
chr3 (1-62)||(10093935-10093995)
chr3 (1-62)||(10200817-10200877)
chr3 (1-60)||(10949129-10949186)
chr3 (1-62)||(11079774-11079833)
chr3 (1-62)||(6303570-6303630)
chr3 (1-62)||(10099936-10099996)
chr3 (1-62)||(20031182-20031243)
chr3 (1-64)||(29913814-29913877)
chr3 (1-57)||(5858802-5858856)
chr3 (1-62)||(10897264-10897324)
chr3 (1-62)||(22625841-22625901)
chr3 (1-62)||(27761852-27761912)
chr3 (1-61)||(47882751-47882809)
chr3 (1-57)||(54193485-54193539)
chr3 (1-39)||(16462456-16462494)
chr3 (1-62)||(47878039-47878097)
chr3 (1-62)||(10594895-10594955)
chr3 (1-62)||(10612639-10612699)
chr3 (1-62)||(29897539-29897600)
chr3 (1-57)||(54188769-54188823)
[»] chr1 (6 HSPs)
chr1 (1-62)||(4144549-4144610)
chr1 (1-62)||(9521984-9522044)
chr1 (1-62)||(2393145-2393204)
chr1 (4-62)||(21353209-21353267)
chr1 (1-56)||(2232853-2232907)
chr1 (1-62)||(25134327-25134387)
[»] chr5 (12 HSPs)
chr5 (1-61)||(10627622-10627682)
chr5 (1-56)||(16093163-16093218)
chr5 (1-62)||(11962299-11962359)
chr5 (1-62)||(42238516-42238576)
chr5 (1-55)||(1240688-1240741)
chr5 (1-57)||(22673092-22673146)
chr5 (1-62)||(28786658-28786718)
chr5 (1-57)||(35385320-35385375)
chr5 (1-52)||(25445752-25445803)
chr5 (1-52)||(25452751-25452802)
chr5 (1-62)||(1171070-1171130)
chr5 (1-62)||(20437176-20437237)
[»] chr8 (16 HSPs)
chr8 (1-56)||(21034126-21034181)
chr8 (1-64)||(33032910-33032973)
chr8 (1-62)||(23179422-23179481)
chr8 (4-58)||(26268100-26268154)
chr8 (1-62)||(28891024-28891083)
chr8 (1-62)||(4812345-4812405)
chr8 (1-62)||(25684900-25684960)
chr8 (1-56)||(16752393-16752447)
chr8 (1-56)||(16757129-16757183)
chr8 (1-56)||(28328166-28328220)
chr8 (1-56)||(28332889-28332943)
chr8 (1-62)||(28895761-28895820)
chr8 (1-62)||(17799290-17799350)
chr8 (1-61)||(3276554-3276613)
chr8 (1-57)||(9020974-9021029)
chr8 (30-62)||(36865986-36866018)
[»] chr2 (16 HSPs)
chr2 (1-62)||(22717095-22717154)
chr2 (1-62)||(17943794-17943855)
chr2 (1-62)||(37170619-37170679)
chr2 (1-56)||(39680304-39680358)
chr2 (1-56)||(39687248-39687302)
chr2 (1-56)||(45679981-45680035)
chr2 (1-62)||(20049878-20049940)
chr2 (1-62)||(20054622-20054684)
chr2 (1-62)||(22712386-22712445)
chr2 (1-62)||(27517503-27517562)
chr2 (1-62)||(12781085-12781145)
chr2 (1-62)||(33670829-33670889)
chr2 (1-63)||(2741201-2741261)
chr2 (1-62)||(2736465-2736524)
chr2 (1-62)||(38191274-38191333)
chr2 (1-62)||(17462695-17462755)
[»] scaffold1050 (1 HSPs)
scaffold1050 (1-62)||(2931-2991)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-62)||(17752-17812)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-62)||(231374-231433)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-58)||(16586-16642)
[»] scaffold0209 (1 HSPs)
scaffold0209 (1-62)||(16897-16957)


Alignment Details
Target: chr4 (Bit Score: 131; Significance: 4e-68; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 47566748 - 47566941
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc-----------acaacaaccatgattaatcatacatacaattc 89  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||           ||||||||||||||||||||||||||  ||||    
T  47566748 ttgattacttggtattaatttgctccatgcatcaagtttattattggtgtggttttctcaaagaattcacaacaaccatgattaatcatacata--attc 47566845  T
Q  90 tttcctgttgttattagtgagttttgaatcatacatacaattctttcatggccatgattctccccaaattgaccaattctaccaaaatttctgtaa 185  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47566846 tttcctattgttattagtgagttttaaatcatacatacaattctttcatggccatgattctccccaaattgaccaattctaccaaaatttctgtaa 47566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36769735 - 36769796
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  36769735 ttgattacttgatattaatttgcttcacgcatcaagtttattattggtgtggttttcacaac 36769796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36771652 - 36771715
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    ||||||| ||||||||||||||||  | |||||||||||||||||| |||||||||||||||||    
T  36771652 ttgattatttggtattaatttgctcaacgcatcaagtttattattgttgtggttttcacaacaa 36771715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4558566 - 4558627
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||| ||||||||| || |||||||||||||||||| |||||||||| ||||    
T  4558566 ttgattacttggtaataatttgctccacgcatcaagtttattattggtgtggttttctcaac 4558627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15312576 - 15312637
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  15312576 ttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctcaac 15312637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 15317219 - 15317278
Alignment:
Q  3 gattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||| ||||||| |||||||||||||| |||||| |||||||||| ||||    
T  15317219 gattacttggtattcatttgctccatgcatcaagttttttattggtgtggttttctcaac 15317278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8529528 - 8529588
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  8529528 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 8529588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15831406 - 15831466
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  15831406 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 15831466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 18587226 - 18587286
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  18587226 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 18587286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4570349 - 4570404
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttca 58  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||||    
T  4570349 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttca 4570404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7050196 - 7050137
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||| |||||||||||||||||| || ||||||||||  |||||| |||||||||||||||    
T  7050196 ttgataacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 7050137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 47567001 - 47567035
Alignment:
Q  188 catcaactctagtttcatttctgaccgtgatagat 222  Q
    |||||||||||||||||||||||||||||||||||    
T  47567001 catcaactctagtttcatttctgaccgtgatagat 47567035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4885130 - 4885190
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| |||| |||||    
T  4885130 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgatttttacaac 4885190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11853824 - 11853885
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||| ||||||||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  11853824 ttgattgcttggtattaatttgctccacccatcaagttttttattggtgtggttttctcaac 11853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 16688864 - 16688806
Alignment:
Q  3 gattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||| |||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  16688864 gattacttgatattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 16688806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16489609 - 16489669
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| |||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  16489609 ttgattacttgatattaatttgctccacacatcaagttt-ttattggtgtggttttctcaac 16489669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 4555986 - 4555925
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    ||||||| |||||||||||||||| || ||||||| ||  |||||| |||||||||| ||||||    
T  4555986 ttgattatttggtattaatttgctccacgcatcaaatt--ttattggtgtggttttctcaacaa 4555925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12166071 - 12166008
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  12166071 ttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaacaa 12166008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 5165766 - 5165705
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||    
T  5165766 ttgattacttggtattaatttgctccacgcatcaagtttattattggtgtgtttttcacaac 5165705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13883733 - 13883794
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  13883733 ttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctcaac 13883794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 33216087 - 33216146
Alignment:
Q  2 tgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaa 61  Q
    ||||||||||||||||||||||| || ||||||||||| |||||| ||||||||| ||||    
T  33216087 tgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttttacaa 33216146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3577410 - 3577350
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  3577410 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 3577350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13467391 - 13467330
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||||||||||| || || ||||||| ||| |||||| |||||||||||||||    
T  13467391 ttgattacttggtattaatttactccacgcatcaaattttttattggtgtggttttcacaac 13467330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17038495 - 17038551
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttca 58  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||    
T  17038495 ttgattacttggtattaatttgctccatgcatcaagttt-ttattggtgtgattttca 17038551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19701829 - 19701769
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||| |||||||| | || |||||||||||||||||| |||||||||||||||    
T  19701829 ttgattacttggt-ttaatttgttccacgcatcaagtttattattggtgtggttttcacaac 19701769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25465826 - 25465766
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  25465826 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 25465766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31248616 - 31248556
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  31248616 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 31248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17694773 - 17694713
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  17694773 ttgattacttggtattaatttgctccacacatcaagttt-ttattggtgtggttttctcaac 17694713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25941928 - 25941988
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||| | || ||||||||||| |||||| |||||||||| ||||    
T  25941928 ttgattacttggtattaatttgttccacgcatcaagttt-ttattggtgtggttttctcaac 25941988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16786193 - 16786254
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    |||||||||||||||||||||||| || ||||||||  | |||||| |||||||||| ||||||    
T  16786193 ttgattacttggtattaatttgctccacgcatcaag--tcttattgttgtggttttctcaacaa 16786254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13878997 - 13879051
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| || ||| |||||||||    
T  13878997 ttgattacttggtattaatttgctccacgcatcaagttt-tttttggtgtggtttt 13879051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30987427 - 30987375
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttt 55  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| ||||||||    
T  30987427 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttt 30987375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26887149 - 26887094
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    ||||||||||| |||||||||||| ||  |||||||||| |||||| ||||||||||    
T  26887149 ttgattacttgatattaatttgctccacacatcaagttt-ttattggtgtggttttc 26887094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44016587 - 44016526
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||    
T  44016587 ttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaac 44016526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44143793 - 44143734
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  44143793 ttgattacttggtattaatttgctccatgcatcaagtt--ttattggtgtggttttcacaac 44143734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 42006919 - 42006977
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcac 59  Q
    |||||||||| |||||||||||||||| |||||||||||||||||  | ||||||||||    
T  42006919 ttgattactttgtattaatttgcttcacgcatcaagtttattatttgtatggttttcac 42006977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7464437 - 7464377
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  7464437 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 7464377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25351611 - 25351671
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  25351611 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 25351671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25405673 - 25405733
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  25405673 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 25405733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30247230 - 30247291
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |  ||||||||||| |||||| |||||||||| ||||    
T  30247230 ttgattacttggtattaatttgctccgcgcatcaagttttttattggtgtggttttctcaac 30247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44010676 - 44010619
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttca 58  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||| ||| |||||||    
T  44010676 ttgattacttgatattaatttgctccatgcatcaaatttattattggtgtagttttca 44010619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3319942 - 3319888
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  3319942 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 3319888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3324710 - 3324656
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  3324710 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 3324656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15540917 - 15540863
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  15540917 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 15540863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2075365 - 2075415
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtg 51  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| ||||    
T  2075365 ttgattacttggtattaatttgctccacgcatcaagttttttattggtgtg 2075415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7070055 - 7070109
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| ||||||||||    
T  7070055 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttc 7070109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21369899 - 21369958
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcaca 60  Q
    |||||||||| ||||||||||||| || ||||||| |||||||||  |||| ||||||||    
T  21369899 ttgattacttagtattaatttgctccacgcatcaaatttattattagtgtgcttttcaca 21369958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8378428 - 8378390
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagttt 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  8378428 ttgattacttggtattaatttgctccacgcatcaagttt 8378390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25357305 - 25357366
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| ||||| |||||| ||  |||||||||| |||||| |||||||||| ||||    
T  25357305 ttgattacttgatattattttgctccacacatcaagtttgttattggtgtggttttctcaac 25357366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34546803 - 34546742
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    ||||||||||| |||||||||| | || ||||||||||  |||||| |||||||||| ||||||    
T  34546803 ttgattacttgatattaatttgttccacgcatcaagtt--ttattggtgtggttttctcaacaa 34546742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7418317 - 7418380
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    |||||||||| ||||||||||| | || |||||||||||||||||| |||||||||||||||||    
T  7418317 ttgattactttgtattaatttgttccacgcatcaagtttattattggtgtggttttcacaacaa 7418380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3330148 - 3330209
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |  ||||||||||| |||||| |||||||||||||||    
T  3330148 ttgattacttggtattaatttgctccgcgcatcaagtttgttattggtgtggttttcacaac 3330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10093995 - 10093935
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||    
T  10093995 ttgattacttggtattaatttgctccatgcatcaagttt-ttattggtgtggttttctcaac 10093935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10200877 - 10200817
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||    
T  10200877 ttgattacttggtattaatttgctccatgcatcaagttt-ttattggtgtggttttctcaac 10200817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10949186 - 10949129
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcaca 60  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||||    
T  10949186 ttgattacttggtattaatttgctccacgcatcaagtt--ttattgatgtggttttcaca 10949129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11079774 - 11079833
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||    
T  11079774 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 11079833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 6303570 - 6303630
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  6303570 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 6303630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10099996 - 10099936
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  10099996 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 10099936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20031243 - 20031182
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||||||||||||||  | |||||| |||| |||||| |||||||||||||||    
T  20031243 ttgattacttggtattaatttgctctacgcatcatgttttttattggtgtggttttcacaac 20031182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29913877 - 29913814
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    ||||||||||||||||||| |||| ||  |||||||||| |||||| |||||||||| ||||||    
T  29913877 ttgattacttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaacaa 29913814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5858802 - 5858856
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| ||||||||||    
T  5858802 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttc 5858856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10897264 - 10897324
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||| | || ||||||||||| |||||| |||||||||| ||||    
T  10897264 ttgattacttggtattaatttgttccacgcatcaagttt-ttattggtgtggttttctcaac 10897324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22625901 - 22625841
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  22625901 ttgattacttggtattaatttgctccacacatcaagttt-ttattggtgtggttttctcaac 22625841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27761912 - 27761852
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||| ||| |||||||||||| |||||||||||||| |||||| |||| ||||||||||    
T  27761912 ttgattagttgatattaatttgctccatgcatcaagttt-ttattggtgtgtttttcacaac 27761852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47882809 - 47882751
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaa 61  Q
    ||||||| |||||||||||||||| || ||||||||||  |||||| ||||||||||||||    
T  47882809 ttgattaattggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaa 47882751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 54193485 - 54193539
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| ||||||||||    
T  54193485 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttc 54193539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16462456 - 16462494
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagttt 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  16462456 ttgattacttggtattaatttgctccacgcatcaagttt 16462494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47878097 - 47878039
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| |||||||||||| || ||||||||||  |||||| |||||||||||||||    
T  47878097 ttgattacttg-tattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 47878039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10594955 - 10594895
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||||||||||| || || | ||||||||| |||||| |||||||||| ||||    
T  10594955 ttgattacttggtattaatttactccacgtatcaagttt-ttattggtgtggttttctcaac 10594895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 10612699 - 10612639
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||  ||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  10612699 ttgattatctggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 10612639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29897600 - 29897539
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||| ||||||||||| |||| ||  |||||||||| |||||| |||||||||| ||||    
T  29897600 ttgattatttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaac 29897539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 54188769 - 54188823
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||| ||  |||||| ||||||||||    
T  54188769 ttgattacttggtattaatttgctccacgcatcaaatt--ttattggtgtggttttc 54188823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4144610 - 4144549
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || | |||||| ||||||||| |||||||||||||||    
T  4144610 ttgattacttggtattaatttgctccacgtatcaagattattattggtgtggttttcacaac 4144549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9521984 - 9522044
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  9521984 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 9522044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2393204 - 2393145
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||| |||||  |||||| |||||||||||||||    
T  2393204 ttgattacttggtattaatttgctccacgcataaagtt--ttattggtgtggttttcacaac 2393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 21353267 - 21353209
Alignment:
Q  4 attacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||| ||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  21353267 attacttagtattaatttgctccacgcatcaagtttgttattggtgtggttttctcaac 21353209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2232853 - 2232907
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| ||  |||||||||| |||||| |||||||||    
T  2232853 ttgattacttggtattaatttgctccacacatcaagttt-ttattggtgtggtttt 2232907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25134327 - 25134387
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||| ||| ||||||||| ||||| ||||||| ||| |||||| |||||||||||||||    
T  25134327 ttgattatttgatattaatttacttcacgcatcaaattt-ttattggtgtggttttcacaac 25134387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10627622 - 10627682
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaa 61  Q
    |||||| |||||| |||||||||| || |||||||||||||||||| ||||||||||||||    
T  10627622 ttgattgcttggttttaatttgctccacgcatcaagtttattattggtgtggttttcacaa 10627682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16093218 - 16093163
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    ||||||||||||||||||||| || || |||||||||||||||||| |||||||||    
T  16093218 ttgattacttggtattaatttactccacgcatcaagtttattattggtgtggtttt 16093163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11962359 - 11962299
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||| ||||||||||||| || ||||||||||| |||||| |||||||||||||||    
T  11962359 ttgattacttagtattaatttgctaca-gcatcaagttttttattggtgtggttttcacaac 11962299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42238516 - 42238576
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| ||||||||| |||||    
T  42238516 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttttacaac 42238576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1240688 - 1240741
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttt 55  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| ||||||||    
T  1240688 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttt 1240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22673092 - 22673146
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| ||||||||||    
T  22673092 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttc 22673146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28786658 - 28786718
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||| |||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  28786658 ttgattatttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 28786718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35385375 - 35385320
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| ||| ||||||    
T  35385375 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtagttttc 35385320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25445752 - 25445803
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtgg 52  Q
    |||||||||||||||||||||||| || ||||||||| | |||||| |||||    
T  25445752 ttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25445803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25452751 - 25452802
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtgg 52  Q
    |||||||||||||||||||||||| || ||||||||| | |||||| |||||    
T  25452751 ttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1171070 - 1171130
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| |||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  1171070 ttgattacttgatattaatttgctccacacatcaagttt-ttattggtgtggttttctcaac 1171130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20437176 - 20437237
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||| ||||||||||||  |  ||||||||||||| ||| |||| ||||||||||    
T  20437176 ttgattacttgatattaatttgctcaacacatcaagtttattgttggtgtgattttcacaac 20437237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21034126 - 21034181
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  21034126 ttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttt 21034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33032910 - 33032973
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaacaa 64  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||| ||| |||||||||||||    
T  33032910 ttgattacttgatattaatttgctctatgcatcaagttttttattggtgtcgttttcacaacaa 33032973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23179481 - 23179422
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||    
T  23179481 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 23179422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 26268154 - 26268100
Alignment:
Q  4 attacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttca 58  Q
    ||||| ||||||||||||||| || |||||||||||||||||| |||||||||||    
T  26268154 attacatggtattaatttgctccacgcatcaagtttattattggtgtggttttca 26268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28891024 - 28891083
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||||    
T  28891024 ttgattacttggtattaatttgctccatgcatcaagtt--ttattggtgtggttttctcaac 28891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4812405 - 4812345
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  4812405 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 4812345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25684900 - 25684960
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  25684900 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 25684960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16752447 - 16752393
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  16752447 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 16752393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16757183 - 16757129
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  16757183 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 16757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28328166 - 28328220
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  28328166 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 28328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28332889 - 28332943
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  28332889 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 28332943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28895761 - 28895820
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||| ||||    
T  28895761 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttctcaac 28895820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17799350 - 17799290
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||||||||||| |||||   ||||||||| |||||| |||||||||||||||    
T  17799350 ttgattacttggtattaatttacttcacatatcaagttt-ttattggtgtggttttcacaac 17799290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3276554 - 3276613
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaa 61  Q
    ||||||||||| |||||||||||| || ||||||||||| |||||| ||||||||| ||||    
T  3276554 ttgattacttgttattaatttgctccacgcatcaagttt-ttattggtgtggttttaacaa 3276613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9021029 - 9020974
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttc 57  Q
    |||||||||||||||||||||||| || |||| |||| | |||||| ||||||||||    
T  9021029 ttgattacttggtattaatttgctccacgcattaagtct-ttattggtgtggttttc 9020974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 36865986 - 36866018
Alignment:
Q  30 catcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||| ||||||||||||||||||||||    
T  36865986 catcaagtttgttattgatgtggttttcacaac 36866018  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22717154 - 22717095
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| |||||||||||||  |||||| |||||||||| ||||    
T  22717154 ttgattacttggtattaatttgctccatgcatcaagtt--ttattggtgtggttttctcaac 22717095  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17943794 - 17943855
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| ||||| ||||    
T  17943794 ttgattacttggtattaatttgctccacgcatcaagtttgttattggtgtgtttttctcaac 17943855  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37170679 - 37170619
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| ||||||||||    
T  37170679 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgattttcacaac 37170619  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39680304 - 39680358
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  39680304 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 39680358  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39687248 - 39687302
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  39687248 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 39687302  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45679981 - 45680035
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggtttt 56  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||    
T  45679981 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggtttt 45680035  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20049940 - 20049878
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaag-tttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||||||| ||| |||||| |||||||||| ||||    
T  20049940 ttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaac 20049878  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20054684 - 20054622
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaag-tttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||||||| ||| |||||| |||||||||| ||||    
T  20054684 ttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaac 20054622  T

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Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22712445 - 22712386
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||| ||||    
T  22712445 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttctcaac 22712386  T

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Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27517562 - 27517503
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||| ||||    
T  27517562 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttctcaac 27517503  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12781145 - 12781085
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| | |||||||| ||||    
T  12781145 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtatggttttctcaac 12781085  T

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Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33670889 - 33670829
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||| | || ||||||||||| |||||| |||||||||| ||||    
T  33670889 ttgattacttggtattaatttgatccacgcatcaagttt-ttattggtgtggttttctcaac 33670829  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2741201 - 2741261
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaaca 63  Q
    ||||||||||||||||||||||||  | ||||||||||  |||||| |||||||||| |||||    
T  2741201 ttgattacttggtattaatttgctctacgcatcaagtt--ttattggtgtggttttctcaaca 2741261  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2736465 - 2736524
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||||||||||||||||||  | ||||||||||  |||||| |||||||||| ||||    
T  2736465 ttgattacttggtattaatttgctctacgcatcaagtt--ttattggtgtggttttctcaac 2736524  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38191274 - 38191333
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || |||| |||||  |||||| |||| ||||||||||    
T  38191274 ttgattacttggtattaatttgctccacgcattaagtt--ttattggtgtgattttcacaac 38191333  T

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Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17462695 - 17462755
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    ||||||||| |||||||||||||| ||  |||||||||| |||||| |||||||||| ||||    
T  17462695 ttgattactcggtattaatttgctccacacatcaagttt-ttattggtgtggttttctcaac 17462755  T

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Target: scaffold1050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2991 - 2931
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  2991 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 2931  T

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Target: scaffold0131 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17752 - 17812
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||||||||| ||||    
T  17752 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtggttttctcaac 17812  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 231374 - 231433
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||||| || ||||||||||  |||||| |||||||||| ||||    
T  231374 ttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttctcaac 231433  T

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Target: scaffold0256 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16586 - 16642
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttca 58  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| |||| ||||||    
T  16586 ttgattacttggtattaatttgctccacgcatcaagttt-ttattggtgtgattttca 16642  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16957 - 16897
Alignment:
Q  1 ttgattacttggtattaatttgcttcatgcatcaagtttattattgatgtggttttcacaac 62  Q
    |||||||||||||||||||||  | || ||||||||||| |||||| |||||||||| ||||    
T  16957 ttgattacttggtattaattttttccacgcatcaagttt-ttattggtgtggttttctcaac 16897  T

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