View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3953_high_8 (Length: 223)
Name: NF3953_high_8
Description: NF3953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3953_high_8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 34134021 - 34134243
Alignment:
| Q |
1 |
agagttgatcccggtgtcgggcctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctga |
100 |
Q |
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| T |
34134021 |
agagttgatcccggtgtcggacctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctga |
34134120 |
T |
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| Q |
101 |
gaaacaagatttccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtatt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34134121 |
gaaacaagatgtccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtatt |
34134220 |
T |
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| Q |
201 |
taatcagttcattcttcaccttc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
34134221 |
taatcagttcattcttcaccttc |
34134243 |
T |
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