View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3962_low_3 (Length: 590)

Name: NF3962_low_3
Description: NF3962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3962_low_3
NF3962_low_3
[»] chr7 (46 HSPs)
chr7 (20-569)||(45841064-45841612)
chr7 (303-537)||(47848607-47848838)
chr7 (341-524)||(36101896-36102076)
chr7 (303-427)||(30200188-30200308)
chr7 (332-440)||(41948478-41948586)
chr7 (341-427)||(42187441-42187527)
chr7 (388-539)||(38135329-38135476)
chr7 (341-444)||(35906409-35906512)
chr7 (341-408)||(42177259-42177326)
chr7 (313-427)||(39811900-39812014)
chr7 (341-543)||(28628045-28628244)
chr7 (341-444)||(12841483-12841586)
chr7 (341-444)||(13859216-13859319)
chr7 (341-444)||(31005194-31005297)
chr7 (341-444)||(34869391-34869494)
chr7 (341-427)||(36514432-36514516)
chr7 (341-427)||(43282376-43282465)
chr7 (341-444)||(49029247-49029350)
chr7 (365-439)||(38920789-38920863)
chr7 (303-421)||(48736130-48736248)
chr7 (341-421)||(27893779-27893857)
chr7 (377-461)||(12966029-12966113)
chr7 (340-483)||(19262603-19262743)
chr7 (487-543)||(30814783-30814839)
chr7 (490-542)||(40830319-40830371)
chr7 (344-427)||(28020938-28021021)
chr7 (341-440)||(14593732-14593835)
chr7 (303-444)||(37617877-37618019)
chr7 (341-427)||(40008642-40008728)
chr7 (341-383)||(48202959-48203001)
chr7 (362-427)||(27021917-27021982)
chr7 (303-444)||(46356064-46356205)
chr7 (487-543)||(44401237-44401293)
chr7 (341-444)||(11593931-11594034)
chr7 (341-444)||(44855380-44855483)
chr7 (341-426)||(5335893-5335976)
chr7 (341-440)||(16013255-16013358)
chr7 (346-444)||(33350014-33350112)
chr7 (362-452)||(40169641-40169731)
chr7 (502-543)||(1011176-1011217)
chr7 (502-543)||(12966145-12966186)
chr7 (396-461)||(35713721-35713786)
chr7 (490-535)||(36245524-36245569)
chr7 (319-444)||(43491257-43491382)
chr7 (490-542)||(14593877-14593929)
chr7 (314-427)||(47796361-47796476)
[»] chr1 (38 HSPs)
chr1 (341-543)||(43423690-43423889)
chr1 (362-543)||(40416363-40416541)
chr1 (346-543)||(38868858-38869052)
chr1 (341-437)||(17815445-17815539)
chr1 (314-427)||(51812469-51812582)
chr1 (304-483)||(14225998-14226175)
chr1 (303-426)||(9599620-9599743)
chr1 (362-543)||(36339915-36340093)
chr1 (339-477)||(19908214-19908352)
chr1 (354-538)||(26016421-26016602)
chr1 (341-442)||(51440975-51441076)
chr1 (378-520)||(13827705-13827844)
chr1 (341-444)||(1210716-1210819)
chr1 (341-440)||(9509289-9509388)
chr1 (377-532)||(5338731-5338883)
chr1 (303-367)||(4379938-4380002)
chr1 (341-543)||(32404638-32404836)
chr1 (362-543)||(3818968-3819146)
chr1 (341-444)||(34792557-34792660)
chr1 (387-543)||(8796226-8796379)
chr1 (379-543)||(48431518-48431679)
chr1 (303-440)||(27848017-27848153)
chr1 (341-422)||(35828780-35828861)
chr1 (308-461)||(40419577-40419730)
chr1 (304-424)||(16943109-16943228)
chr1 (372-427)||(7921837-7921892)
chr1 (361-440)||(8343070-8343149)
chr1 (362-444)||(22090088-22090170)
chr1 (341-427)||(32231179-32231265)
chr1 (341-520)||(38877478-38877652)
chr1 (490-539)||(8342997-8343046)
chr1 (341-402)||(43375829-43375889)
chr1 (341-444)||(8671891-8671992)
chr1 (490-542)||(10272375-10272427)
chr1 (377-421)||(13827948-13827992)
chr1 (303-407)||(39422287-39422390)
chr1 (372-444)||(51602058-51602130)
chr1 (303-375)||(52442781-52442853)
[»] chr4 (48 HSPs)
chr4 (341-427)||(33709895-33709981)
chr4 (313-539)||(54470150-54470373)
chr4 (303-427)||(49987361-49987485)
chr4 (304-427)||(51252686-51252807)
chr4 (341-407)||(10775667-10775733)
chr4 (341-427)||(44047573-44047659)
chr4 (346-444)||(53707770-53707868)
chr4 (303-444)||(56375223-56375364)
chr4 (341-440)||(25257793-25257890)
chr4 (410-543)||(13805377-13805507)
chr4 (341-444)||(31960022-31960125)
chr4 (341-444)||(48174301-48174404)
chr4 (341-444)||(52569723-52569826)
chr4 (341-427)||(37797823-37797909)
chr4 (490-544)||(45569120-45569174)
chr4 (303-407)||(17900413-17900517)
chr4 (303-427)||(38570972-38571095)
chr4 (491-543)||(49987526-49987578)
chr4 (341-477)||(10209009-10209141)
chr4 (313-392)||(20998955-20999034)
chr4 (303-419)||(31403250-31403369)
chr4 (450-543)||(47147453-47147543)
chr4 (346-444)||(33227185-33227283)
chr4 (487-537)||(34233142-34233192)
chr4 (303-406)||(43070014-43070113)
chr4 (303-420)||(50662322-50662437)
chr4 (303-405)||(45423552-45423650)
chr4 (303-420)||(50680672-50680789)
chr4 (341-440)||(50471499-50471596)
chr4 (487-543)||(53540404-53540460)
chr4 (341-427)||(28236156-28236240)
chr4 (341-477)||(28497459-28497596)
chr4 (364-427)||(31459024-31459087)
chr4 (341-444)||(33191056-33191159)
chr4 (303-407)||(44360016-44360124)
chr4 (341-461)||(46715563-46715678)
chr4 (490-544)||(7682021-7682075)
chr4 (362-444)||(43433916-43433998)
chr4 (346-444)||(47265410-47265508)
chr4 (510-543)||(33225945-33225978)
chr4 (493-538)||(38865758-38865803)
chr4 (303-359)||(2588914-2588970)
chr4 (303-392)||(34233291-34233382)
chr4 (362-426)||(35555873-35555937)
chr4 (487-543)||(37488205-37488261)
chr4 (372-444)||(37773659-37773731)
chr4 (362-454)||(41192828-41192920)
chr4 (341-444)||(48622751-48622852)
[»] chr5 (30 HSPs)
chr5 (341-544)||(7359371-7359570)
chr5 (332-542)||(14749269-14749476)
chr5 (345-542)||(31636033-31636225)
chr5 (342-543)||(15489604-15489802)
chr5 (377-477)||(43475247-43475347)
chr5 (341-444)||(2075682-2075785)
chr5 (362-542)||(2712936-2713113)
chr5 (303-420)||(32516491-32516606)
chr5 (341-440)||(33667189-33667286)
chr5 (341-444)||(4496355-4496458)
chr5 (386-543)||(42199302-42199456)
chr5 (346-444)||(24178486-24178584)
chr5 (308-543)||(6888931-6889163)
chr5 (487-543)||(9235163-9235217)
chr5 (345-426)||(18351134-18351215)
chr5 (348-426)||(43558053-43558133)
chr5 (313-426)||(30588396-30588505)
chr5 (303-426)||(34194724-34194845)
chr5 (341-444)||(1275236-1275338)
chr5 (341-427)||(11002648-11002732)
chr5 (490-544)||(3775178-3775232)
chr5 (487-545)||(5305753-5305811)
chr5 (362-440)||(34273019-34273097)
chr5 (307-460)||(4026527-4026679)
chr5 (490-543)||(9917562-9917615)
chr5 (490-543)||(12576972-12577025)
chr5 (303-528)||(21952284-21952512)
chr5 (487-543)||(6788181-6788237)
chr5 (341-444)||(12492592-12492698)
chr5 (303-374)||(33006595-33006664)
[»] chr3 (25 HSPs)
chr3 (312-543)||(39600793-39601021)
chr3 (303-477)||(19736929-19737104)
chr3 (303-477)||(19757832-19758007)
chr3 (303-461)||(36820152-36820308)
chr3 (317-440)||(49503766-49503889)
chr3 (341-444)||(47233804-47233907)
chr3 (377-543)||(42510128-42510289)
chr3 (346-427)||(54128354-54128435)
chr3 (332-427)||(29600861-29600957)
chr3 (386-543)||(21200564-21200718)
chr3 (489-544)||(33755453-33755508)
chr3 (341-440)||(52138771-52138870)
chr3 (341-423)||(3987018-3987100)
chr3 (341-427)||(26388452-26388538)
chr3 (341-407)||(50249355-50249421)
chr3 (490-543)||(31261054-31261107)
chr3 (490-543)||(40982013-40982066)
chr3 (363-440)||(50960845-50960922)
chr3 (364-427)||(26490309-26490372)
chr3 (341-444)||(28245408-28245511)
chr3 (487-538)||(40116585-40116636)
chr3 (341-407)||(31454471-31454536)
chr3 (362-543)||(45289203-45289383)
chr3 (496-544)||(46367499-46367547)
chr3 (487-543)||(54365087-54365143)
[»] chr2 (27 HSPs)
chr2 (303-543)||(9556481-9556717)
chr2 (341-543)||(38434922-38435122)
chr2 (341-543)||(37481729-37481928)
chr2 (344-426)||(11412695-11412777)
chr2 (341-543)||(43752059-43752258)
chr2 (366-536)||(18958903-18959074)
chr2 (341-427)||(13240970-13241056)
chr2 (467-543)||(33504320-33504393)
chr2 (303-393)||(36039156-36039246)
chr2 (362-454)||(11017306-11017398)
chr2 (446-543)||(26784452-26784546)
chr2 (341-440)||(41763254-41763352)
chr2 (341-427)||(19024151-19024237)
chr2 (303-440)||(8180713-8180850)
chr2 (490-543)||(19235096-19235149)
chr2 (342-413)||(7615271-7615340)
chr2 (376-444)||(24583840-24583908)
chr2 (341-427)||(40759070-40759157)
chr2 (378-427)||(14197387-14197437)
chr2 (303-384)||(21834486-21834567)
chr2 (303-407)||(23714506-23714607)
chr2 (303-407)||(24102178-24102279)
chr2 (502-543)||(33287550-33287591)
chr2 (365-425)||(12141539-12141599)
chr2 (487-543)||(37452338-37452394)
chr2 (372-542)||(44437834-44438001)
chr2 (487-531)||(45436956-45437000)
[»] chr8 (39 HSPs)
chr8 (303-542)||(32043523-32043759)
chr8 (341-539)||(5908613-5908812)
chr8 (313-403)||(44681288-44681378)
chr8 (318-543)||(10080019-10080239)
chr8 (341-427)||(9695602-9695688)
chr8 (341-426)||(13171875-13171960)
chr8 (341-407)||(11733718-11733784)
chr8 (345-422)||(42493536-42493611)
chr8 (494-543)||(4011204-4011253)
chr8 (366-427)||(41444551-41444612)
chr8 (313-421)||(2518623-2518730)
chr8 (303-374)||(16252868-16252937)
chr8 (346-426)||(30113423-30113503)
chr8 (303-444)||(36545080-36545223)
chr8 (341-444)||(36565449-36565552)
chr8 (415-543)||(35914713-35914838)
chr8 (341-423)||(39051113-39051195)
chr8 (487-544)||(16705861-16705918)
chr8 (303-384)||(28300380-28300461)
chr8 (341-401)||(35601992-35602050)
chr8 (490-543)||(45512607-45512660)
chr8 (483-543)||(5127382-5127442)
chr8 (487-543)||(35643718-35643774)
chr8 (303-406)||(36069576-36069676)
chr8 (487-542)||(2216402-2216457)
chr8 (341-407)||(25985492-25985556)
chr8 (341-427)||(2796528-2796614)
chr8 (341-427)||(7046305-7046391)
chr8 (377-427)||(18474185-18474235)
chr8 (493-542)||(24399902-24399951)
chr8 (361-426)||(29700267-29700332)
chr8 (308-440)||(30748397-30748527)
chr8 (490-543)||(32931078-32931131)
chr8 (362-427)||(40813316-40813381)
chr8 (372-444)||(12491346-12491418)
chr8 (341-444)||(18125146-18125247)
chr8 (437-539)||(38178376-38178475)
chr8 (491-543)||(38392005-38392057)
chr8 (491-544)||(41444451-41444506)
[»] scaffold0018 (3 HSPs)
scaffold0018 (341-444)||(31439-31542)
scaffold0018 (361-440)||(44080-44159)
scaffold0018 (490-543)||(178532-178585)
[»] chr6 (11 HSPs)
chr6 (308-440)||(33083996-33084128)
chr6 (488-543)||(34617-34672)
chr6 (341-408)||(12134145-12134212)
chr6 (362-500)||(14389323-14389457)
chr6 (502-543)||(9593820-9593861)
chr6 (361-426)||(21870299-21870364)
chr6 (378-474)||(6293564-6293660)
chr6 (377-429)||(7513614-7513666)
chr6 (487-543)||(8364670-8364726)
chr6 (378-543)||(24665818-24665981)
chr6 (492-544)||(33997655-33997707)
[»] scaffold0050 (1 HSPs)
scaffold0050 (487-543)||(45556-45611)


Alignment Details
Target: chr7 (Bit Score: 522; Significance: 0; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 20 - 569
Target Start/End: Complemental strand, 45841612 - 45841064
Alignment:
Q  20 catcaaagcatcttgagcttggttataaaaggactcaaggtgatgaagttgaagatatgtatattttgttacgcgaagtcaaaaggcagatcccctctgt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45841612 catcaaagcatcttgagcttggttataaaaggactcaaggtgatgaagttgaagatatgtatattttgttacgcgaagtcaagaggcagatcccctctgt 45841513  T
Q  120 tactgctgtgtgttccggtgccattgcatctgattatcagagactgcgcgtcgaaagtgtttgttctaggttaggtcttgtttctttggcttatttgtgg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45841512 tactgctgtgtgttccggtgccattgcatctgattatcagagactgcgcgtcgaaagtgtttgttctaggttaggtcttgtttctttggcttatttgtgg 45841413  T
Q  220 aaacaagatcagtccttgctcctcaatgaaatggtaaatttggatttatgtttatgtagttttcaatattttcttctttagacgttgtgttgaatgtgtg 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45841412 aaacaagatcagtccttgctcctcaatgaaatggtaaatttggatttatgtttatgtagttttcaatattttcttctttagatgttgtgttgaatgtgtg 45841313  T
Q  320 gtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtt 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45841312 gtaagcttagaagagatacggttagaaatgacaacattagatagagagttga-gtaacacctataatagaaaagacggtggaaactaggtttagttggtt 45841214  T
Q  420 tgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaa 519  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45841213 tgggcatgcagtgagatgacctgtacattttgtagcaaggagcataaatcagatggagcgtagtcgccagatcactagagacagaggaacacctagaaaa 45841114  T
Q  520 attatgagagaaactattaagaaaatgctttagatagaaatatgatatag 569  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45841113 attacgagagaaactattaagaaaatgctttagatagaaatatgatatag 45841064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 303 - 537
Target Start/End: Original strand, 47848607 - 47848838
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||||  |||| | |||| | | |||| ||| ||||||||| ||||||||| |||| | |||||| ||||||||| |||||||    
T  47848607 gttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagttggggtagcgcctatagtagaaaagatggtggaa 47848706  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagaca 502  Q
    | |||| |||| |||||||||||||  | |||| |||  ||| ||| ||||  ||||||  || |||||||||||  ||||   | ||||||||||| ||    
T  47848707 aataggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggatagt---ctgatcactagaggca 47848803  T
Q  503 gaggaacacctagaaaaattatgagagaaactatt 537  Q
    |||||| | ||||||||| ||| ||||||||||||    
T  47848804 gaggaagaactagaaaaactataagagaaactatt 47848838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 524
Target Start/End: Complemental strand, 36102076 - 36101896
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||||||||||||| ||   |||||  ||||| |||||||||||||||||| | |||||| |||| |||| ||||||||| ||| || |||| ||||    
T  36102076 ttagaaatgacaacatttgaggaagagtgaaggtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacc 36101977  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattat 524  Q
      || |||||||| || ||||  || |||| ||||||  ||||   ||||||||||||| |||||||| |||||||||||||||    
T  36101976 tatagattttgtaacagggagagtagatcatatggagaatagt---cagatcactagaggcagaggaagacctagaaaaattat 36101896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 303 - 427
Target Start/End: Complemental strand, 30200308 - 30200188
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| |||||||||||| ||||| | |||| | ||||||||||||||||||||    |||||  ||||||||||||| ||||||||| |||||||    
T  30200308 gttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacattaga----gagttagggtaacacctatagtagaaaagatggtggaa 30200213  T
Q  403 actaggtttagttggtttgggcatg 427  Q
    |||||| |||| || ||| ||||||    
T  30200212 actaggcttaggtgattttggcatg 30200188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 41948478 - 41948586
Alignment:
Q  332 gagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagt 431  Q
    |||||||| ||||||||||||||||||||  ||||||||  ||| ||| || ||||||||||| ||||||||||||| |||  ||||||||||||| ||     
T  41948478 gagatacgattagaaatgacaacattagagtgagagttggcgtagcacttacaatagaaaagatggtggaaactaggcttaagtggtttgggcatgtaga 41948577  T
Q  432 gagatgacc 440  Q
    |||| ||||    
T  41948578 gagaagacc 41948586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 42187441 - 42187527
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||||| || ||||||| ||||||| | |||| |||||||||||||||||| |||||||| |||| |||| |||||||||||||    
T  42187441 ttagaaatggcagcattagaaagagagtcggggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgggcatg 42187527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 539
Target Start/End: Complemental strand, 38135476 - 38135329
Alignment:
Q  388 gaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgcc 487  Q
    ||||||| |||||||| |||| |||| |||||||| |||| ||  ||| |||| ||| ||||||||| |||||| ||| |||||||||||  ||||   |    
T  38135476 gaaaagatggtggaaaataggcttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggag-atagatcagatggaggatagt---c 38135381  T
Q  488 agatcactagagacagaggaacacctagaaaaattatgagagaaactattaa 539  Q
    |||||| ||||| |||| ||| ||||||||||| ||| ||||||||||||||    
T  38135380 agatcattagaggcagatgaagacctagaaaaagtataagagaaactattaa 38135329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 35906512 - 35906409
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| |||||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  35906512 ttaggaatgacaccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 35906413  T
Q  441 cgta 444  Q
    ||||    
T  35906412 cgta 35906409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 42177326 - 42177259
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactagg 408  Q
    ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||| |||| ||||||||    
T  42177326 ttagaaatgacaatattagagagagagttgaggtatcacctatagtagaaaagatggtgaaaactagg 42177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 427
Target Start/End: Original strand, 39811900 - 39812014
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggttta 412  Q
    ||||||||||||  |||| | |||| | |||||||||||||||||||| ||||||||| || | ||||||| |||||||| | |||| ||||| || |||    
T  39811900 atgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagttggggcagcacctatcatagaaaaaatggtgaaaactcggctta 39811999  T
Q  413 gttggtttgggcatg 427  Q
    | | |||||||||||    
T  39812000 ggtagtttgggcatg 39812014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 28628244 - 28628045
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||| ||||||||||| || ||||||  ||| |||||| | |||||| || |||||||| | || |||| ||||||||||||| |  ||||  |||    
T  28628244 ttagaaattacaacattagagagggagttggagtagcacctagagtagaaatgatggtggaaaattggcttaggtggtttgggcatgtaaagagaaaacc 28628145  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
     ||| ||| ||||| ||||||  || ||| |||||||  ||||   || ||||| ||||  ||||||| ||||||||||| ||| ||||||||||||| |    
T  28628144 tgtagattatgtagtaaggagagtagatccgatggaggatagt---caaatcacaagaggtagaggaagacctagaaaaactataagagaaactattagg 28628048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 12841586 - 12841483
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||  ||||||| ||||||| |||||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  12841586 ttaggaatgaccccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 12841487  T
Q  441 cgta 444  Q
    ||||    
T  12841486 cgta 12841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 13859319 - 13859216
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  13859319 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 13859220  T
Q  441 cgta 444  Q
    ||||    
T  13859219 cgta 13859216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 31005194 - 31005297
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||| ||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| ||||||||| ||||||||||||| || |||| ||||    
T  31005194 ttaggaataacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacc 31005293  T
Q  441 cgta 444  Q
    ||||    
T  31005294 cgta 31005297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 34869391 - 34869494
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  34869391 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 34869490  T
Q  441 cgta 444  Q
    ||||    
T  34869491 cgta 34869494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 36514516 - 36514432
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||| ||||||||||||  |||||||| |||| |||||||| ||||||||| ||| ||||||||  |||| |||||||||||||    
T  36514516 ttagaaaggacaacattaga--gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatg 36514432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 43282376 - 43282465
Alignment:
Q  341 ttagaaatgacaacatt---agatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||   ||| ||||||||| |||| |||||||| |||||||| |||||||||||||| |||| ||  |||||||||    
T  43282376 ttagaaatgacaacatttagagagagagagttggggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgggcatg 43282465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 49029247 - 49029350
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  49029247 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 49029346  T
Q  441 cgta 444  Q
    ||||    
T  49029347 cgta 49029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 365 - 439
Target Start/End: Original strand, 38920789 - 38920863
Alignment:
Q  365 gagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgac 439  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||| |||  ||||||||||||| || ||||||||    
T  38920789 gagttggggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgggcatgtagagagatgac 38920863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 421
Target Start/End: Complemental strand, 48736248 - 48736130
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||||||||||||||||  |||| ||||||   ||||||||||| |||||| | ||||||||| |||| |||||| | ||||||||| ||  |||    
T  48736248 gttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagttggggtagcacctacagtagaaaagatgggagaa 48736149  T
Q  403 actaggtttagttggtttg 421  Q
    |||||  |||| |||||||    
T  48736148 actagacttaggtggtttg 48736130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 421
Target Start/End: Complemental strand, 27893857 - 27893779
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttg 421  Q
    ||||||| ||||| ||||||  |||||||||||||||||||||| ||||| ||| |||||||| |||| |||| |||||||    
T  27893857 ttagaaacgacaatattaga--gagagttgaggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttg 27893779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 12966029 - 12966113
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    ||||||||  |||||||| ||||||||||| | |||| ||||||||||||| || |||| |||||||| ||| ||||| ||||||    
T  12966029 cacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacccgtaaattctgtagtaaggag 12966113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 483
Target Start/End: Complemental strand, 19262743 - 19262603
Alignment:
Q  340 gttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgac 439  Q
    |||||||||||||| |||||  ||||||||| |||| |||||||  ||||||||| ||| |||||| || |||| ||||||| ||||| || |||| |||    
T  19262743 gttagaaatgacaatattag--agagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagac 19262646  T
Q  440 ccgtacattttgtagcaaggagcataaatcagatggagcgtagt 483  Q
    | ||| | ||||||| ||| ||  || ||||||||||| |||||    
T  19262645 ctgtaga-tttgtagtaagaagagtagatcagatggagtgtagt 19262603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 30814839 - 30814783
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| |||||||| ||||||||| | ||| ||||||||||||||||||    
T  30814839 cagatcactagaggcagaggaagacctagaaacactataagagaaactattaagaaa 30814783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 40830319 - 40830371
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    ||||||||||||||||||| ||||||||||  ||| |||||||||||||||||    
T  40830319 atcactagagacagaggaagacctagaaaatctataagagaaactattaagaa 40830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 28020938 - 28021021
Alignment:
Q  344 gaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||| ||||||||| | ||||||| |||| ||| |||  ||||||||| |||||||||| || |||| |||||||||||||    
T  28020938 gaaatgataacattagagaaagagttggggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatg 28021021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 14593732 - 14593835
Alignment:
Q  341 ttagaaatgacaacattagatagagagt----tgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagat 436  Q
    |||||||||||||||||||| |||||||    || ||| ||||||||| ||||||| | ||| ||||||||  |||| || |||||||||| |||||||     
T  14593732 ttagaaatgacaacattagagagagagtgagctggggtgacacctatagtagaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 14593831  T
Q  437 gacc 440  Q
    ||||    
T  14593832 gacc 14593835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 444
Target Start/End: Original strand, 37617877 - 37618019
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| ||| ||||||||  ||||  ||||| | |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||    
T  37617877 gttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaa 37617976  T
Q  403 ac-taggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |  |||| |||| ||||||||||||| || |||| ||||||||    
T  37617977 aaataggcttagatggtttgggcatgtagagagaagacccgta 37618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 40008728 - 40008642
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggt--aacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||||||||||||||||  |||||||| ||   ||||||||| | |||||||| |||||||||| || |||| |||||||||||||    
T  40008728 ttagaaatgacaacattaga--gagagttggggataaacacctatcaaagaaaagatggtggaaactcggattaggtggtttgggcatg 40008642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 48203001 - 48202959
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctat 383  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  48203001 ttagaaatgacaacattagagagagagttggggtaacacctat 48202959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 427
Target Start/End: Complemental strand, 27021982 - 27021917
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||||| |||| |||||||| ||||||||  |||| |||||||| |||| |||||||||||||    
T  27021982 agagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgggcatg 27021917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 444
Target Start/End: Complemental strand, 46356205 - 46356064
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||||||| ||||||||  ||||   |||| | |||| ||||||| ||| ||| ||||| | | |||| |||||||| ||||||||  ||| |||    
T  46356205 gttgcgttgaatgagtggtaagactagacaggataggattaggaatgacaccatcagagagagaatgggggtagcacctatagtagaaaagttggtagaa 46356106  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    | ||||||||| ||||||||||||| || |||| ||| ||||    
T  46356105 aataggtttagatggtttgggcatgtagagagaagacacgta 46356064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 44401293 - 44401237
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||||||   |||||  ||||||||||||||| ||||||||||||||||||    
T  44401293 cagatcactagaggtggaggatgacctagaaaaattataagagaaactattaagaaa 44401237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 11593931 - 11594034
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| |||| || ||||||| | |||| |||||||| ||||||||  ||| |||| || | |||| ||||||||||||| || |||| ||||    
T  11593931 ttaggaatgacaccatttgagagagagtgggggtagcacctatagtagaaaagttggtagaaaatacggttagatggtttgggcatgtagagagaagacc 11594030  T
Q  441 cgta 444  Q
    ||||    
T  11594031 cgta 11594034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 44855483 - 44855380
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | | ||  ||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  44855483 ttaggaatgacaccattagagagagagtggggatagtacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 44855384  T
Q  441 cgta 444  Q
    ||||    
T  44855383 cgta 44855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 426
Target Start/End: Original strand, 5335893 - 5335976
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    |||||||||| |||||||||  |||||||| |||| || ||||| ||| ||||| ||| ||||||||  |||| ||||||||||||    
T  5335893 ttagaaatgataacattaga--gagagttggggtagcatctatagtaggaaagatggtcgaaactagacttaggtggtttgggcat 5335976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 16013255 - 16013358
Alignment:
Q  341 ttagaaatgacaacattagatagagagt----tgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagat 436  Q
    |||||||||||||||||||| |||||||    || ||| ||||||||| || |||| | ||| ||||||||  |||| || |||||||||| |||||||     
T  16013255 ttagaaatgacaacattagagagagagtgagctggggtgacacctatagtacaaaaaatggtagaaactagacttaggtgatttgggcatgtagtgagaa 16013354  T
Q  437 gacc 440  Q
    ||||    
T  16013355 gacc 16013358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 444
Target Start/End: Complemental strand, 33350112 - 33350014
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| ||||||| ||||||| | |||  |||||||| ||||||||  | | |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  33350112 aatgacaccattagagagagagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagacccgta 33350014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 452
Target Start/End: Original strand, 40169641 - 40169731
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgt 452  Q
    ||||| ||| |||| ||| |||| ||||||||| |||||||| |||| |||| ||||||||||||| || || | ||| |||| |||||||    
T  40169641 agagaattggggtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagacacgtagattttgt 40169731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 1011176 - 1011217
Alignment:
Q  502 agaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||    
T  1011176 agaggaagacctagaaaaattatgagagaaattattaggaaa 1011217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 12966145 - 12966186
Alignment:
Q  502 agaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||    
T  12966145 agaggaagacctagaaaaactataagagaaactattaagaaa 12966186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 461
Target Start/End: Original strand, 35713721 - 35713786
Alignment:
Q  396 ggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||||| |||| |||| ||||||||||||| || |||| |||  ||||||||||||| ||||||    
T  35713721 ggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggag 35713786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 535
Target Start/End: Complemental strand, 36245569 - 36245524
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaacta 535  Q
    ||||||||||||||||||| ||||| ||||| ||| ||||||||||    
T  36245569 atcactagagacagaggaagacctataaaaactataagagaaacta 36245524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 43491257 - 43491382
Alignment:
Q  319 ggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggt 418  Q
    |||||| ||||| | |||| | |||| ||||||| |||| |  ||||||| | ||||||||||||| || ||||   ||| |||| |||| |||| ||||    
T  43491257 ggtaagattagatgggatatgattaggaatgacaccattggggagagagtaggggtaacacctatagtataaaaattggtagaaaataggcttagatggt 43491356  T
Q  419 ttgggcatgcagtgagatgacccgta 444  Q
    ||||||||| || |||| ||||||||    
T  43491357 ttgggcatgtagagagaagacccgta 43491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 14593877 - 14593929
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    ||||||||||  || |||| ||||||||||| ||| |||||||||||||||||    
T  14593877 atcactagaggtaggggaagacctagaaaaactataagagaaactattaagaa 14593929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 427
Target Start/End: Complemental strand, 47796476 - 47796361
Alignment:
Q  314 tgtgtggtaagcttagaagagatacggttagaaatgacaacattagatag--agagttgaggtaacacctataatagaaaagacggtggaaactaggttt 411  Q
    |||||||||||  |||| | |||| | ||||||||||||| |||||||||  |||||||  ||| || ||||| ||||||||  ||| |||| ||||  |    
T  47796476 tgtgtggtaagactagatgggataggattagaaatgacaatattagatagagagagttggagtaccaactatagtagaaaaggtggttgaaaataggcgt 47796377  T
Q  412 agttggtttgggcatg 427  Q
    || |||||||||||||    
T  47796376 aggtggtttgggcatg 47796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 341 - 543
Target Start/End: Original strand, 43423690 - 43423889
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||| ||||||||| ||||||||||||| |||| |||||||| |||| || |||| |||     
T  43423690 ttagaaatgaccacattagagagagagttggggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagact 43423789  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
     ||| ||| ||||| ||| ||  || |  |||||||   |||| | || ||||||||||  ||||||| ||||||||||||||  ||||| || ||||||    
T  43423790 tgtagattatgtagtaagtagagtagactagatgga---tagtagtcaaatcactagaggtagaggaagacctagaaaaattacaagagagaccattaag 43423886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 543
Target Start/End: Original strand, 40416363 - 40416541
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||||||  ||| |||||||| ||||||||| ||||||||| ||| |||| |||||| |||||| || |||| || | ||| ||||||||| ||||||    
T  40416363 agagagttggagtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggag 40416462  T
Q  462 cataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
      || |||||||| ||  ||||   |||||||| | ||||||| ||| ||||||||||| ||| ||| ||||||||||||||    
T  40416463 agtagatcagatgcaggatagt---cagatcaccaaagacagaagaagacctagaaaaactataagacaaactattaagaaa 40416541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 346 - 543
Target Start/End: Original strand, 38868858 - 38869052
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtac 445  Q
    ||||||||||||| | |||| ||||  ||| ||||||| |||||||||| |||||||||| || |||| ||||||||||||| || ||||  ||  |||     
T  38868858 aatgacaacattaaagagagggttggagtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgggcatgtagagagaacactagtag 38868957  T
Q  446 attttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||| | |||| |||||  || || |||||||| |||||   || |||| ||||| |||| ||| ||||||||||| ||| ||||||| ||||||||||    
T  38868958 attctctagcgaggagagtagattagatggagggtagt---caaatcattagaggcagaagaagacctagaaaaactataagagaaattattaagaaa 38869052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 341 - 437
Target Start/End: Original strand, 17815445 - 17815539
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatg 437  Q
    ||||||||||||| |||||| |||||  |||||||  || |||||| ||||||| ||||||||||||| |||||||||||||||||| || ||||||    
T  17815445 ttagaaatgacaatattagagagaga--tgaggtaggacttataatggaaaagatggtggaaactaggcttagttggtttgggcatgtagagagatg 17815539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 427
Target Start/End: Original strand, 51812469 - 51812582
Alignment:
Q  314 tgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttag 413  Q
    ||||||||||| |||||   |||| | ||||||||||| || ||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||||| |||     
T  51812469 tgtgtggtaagattagacacgataagattagaaatgactactttagagagagagttggggtaacaactatagtagaaaagatggtggaaactaggcttat 51812568  T
Q  414 ttggtttgggcatg 427  Q
     || ||||||||||    
T  51812569 gtgatttgggcatg 51812582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 483
Target Start/End: Complemental strand, 14226175 - 14225998
Alignment:
Q  304 ttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaa 403  Q
    |||||||| ||||||||||||  ||||   |||| | ||||||||| ||||||| ||  ||||||||  ||| ||||||| |||||||||| ||||||||    
T  14226175 ttgtgttggatgtgtggtaaggctagacatgataggattagaaatggcaacattgga--gagagttgcagtagcacctatcatagaaaagatggtggaaa 14226078  T
Q  404 ctaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagt 483  Q
     |||| |||| ||||||||||||| || |||    || ||| ||||||||| ||||||  || |||| ||||||||||||    
T  14226077 ataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcacatggagcgtagt 14225998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 303 - 426
Target Start/End: Complemental strand, 9599743 - 9599620
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||| ||||||||  |||| | |||| | |||| ||||||| ||||||| |||||||||  |||||||||||| ||||||||| ||| |||    
T  9599743 gttgtgttggatgagtggtaagactagacgggatatgattaggaatgacatcattagagagagagttggagtaacacctatagtagaaaagatggtagaa 9599644  T
Q  403 actaggtttagttggtttgggcat 426  Q
    | |||| |||| ||||| ||||||    
T  9599643 aataggcttaggtggttcgggcat 9599620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 362 - 543
Target Start/End: Complemental strand, 36340093 - 36339915
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||||||  ||| |||||||| ||||||||| |||||||| ||||||||| |||||| | |||| || |||| ||||  || ||||||||| |||| |    
T  36340093 agagagttggtgtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacctatagattttgtagtaaggcg 36339994  T
Q  462 cataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
      |  |||||||||||  ||  |   ||||||||||||  ||||||| ||||||||||| ||| ||||||||||||| ||||    
T  36339993 ggttgatcagatggaggatacct---agatcactagaggtagaggaagacctagaaaaactatcagagaaactattaggaaa 36339915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 477
Target Start/End: Complemental strand, 19908352 - 19908214
Alignment:
Q  339 ggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatga 438  Q
    ||||||||||||||| |||| | ||||||||| |||| |||||||| || |||||| || |||||| | |||||| || |||||||||| || ||||  |    
T  19908352 ggttagaaatgacaaaattaaagagagagttgtggtagcacctatagtaaaaaagatgggggaaaccaagtttaggtgatttgggcatgtagagagaaaa 19908253  T
Q  439 cccgtacattttgtagcaaggagcataaatcagatggag 477  Q
    || ||| ||| ||||| ||||||   |||||||||||||    
T  19908252 cctgtagattatgtagtaaggagagcaaatcagatggag 19908214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 538
Target Start/End: Original strand, 26016421 - 26016602
Alignment:
Q  354 cattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgta 453  Q
    ||||||| ||||||||| |||||||||||||  |||||||| ||| |||||||| ||||| ||||||||| ||| ||  ||| ||||  | |||| ||||    
T  26016421 cattagagagagagttggggtaacacctatatgagaaaagatggtagaaactagatttaggtggtttgggtatgtagaaagaagacctatgcattctgta 26016520  T
Q  454 gcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactatta 538  Q
    ||||||||  || |||||||| || | |||   |||||||||||||  |   | | ||||||||||| ||| |||||||||||||    
T  26016521 gcaaggagattagatcagatgaaggggagt---cagatcactagaggtaagagtagacctagaaaaactataagagaaactatta 26016602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 442
Target Start/End: Complemental strand, 51441076 - 51440975
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | ||||||||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  51441076 ttaggaatgacaccattagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 51440977  T
Q  441 cg 442  Q
    ||    
T  51440976 cg 51440975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 520
Target Start/End: Complemental strand, 13827844 - 13827705
Alignment:
Q  378 acctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggag 477  Q
    ||||||| ||||||||||||||||||||||| | || |||||||| |||| || |||| ||   ||| ||| ||||| ||||||  || |||| |||||     
T  13827844 acctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatggaa 13827745  T
Q  478 cgtagttgccagatcactagagacagaggaacacctagaaaaa 520  Q
    | ||||   ||||||||||||| |||||||| |||||||||||    
T  13827744 catagt---cagatcactagaggcagaggaagacctagaaaaa 13827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 1210716 - 1210819
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  1210716 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 1210815  T
Q  441 cgta 444  Q
    ||||    
T  1210816 cgta 1210819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 9509289 - 9509388
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||| |||  ||| |||| |||| | ||||||||||| || |||| ||||    
T  9509289 ttagaaatgacaccattagagagagagttggggtagcacctatagtagaaaagatggtaaaaaataggcttaggtagtttgggcatgtagagagaagacc 9509388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 532
Target Start/End: Original strand, 5338731 - 5338883
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatgga 476  Q
    |||||||| ||||||||| ||||||||||  | |||| |||||||||||||||| |||| |||| ||| ||  | ||| ||||||  || ||||||||||    
T  5338731 cacctatagtagaaaagatggtggaaactgagcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatgga 5338830  T
Q  477 gcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaa 532  Q
    |  || |   ||||||||||||| |||| | | ||||||||||| ||| |||||||    
T  5338831 ggatatt---cagatcactagaggcagaagtagacctagaaaaactataagagaaa 5338883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 4379938 - 4380002
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagag 367  Q
    ||||||||| ||||||||||||  ||||| ||||| | |||||||||||||||||||| ||||||    
T  4379938 gttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacattagagagagag 4380002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 32404836 - 32404638
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||| ||||||||| || || |||||| ||||||||||||| || |||||| |||||||| |||| |||| ||||||||  ||| || |||| ||||    
T  32404836 ttagaaacgacaacattcgagagtgagttg-ggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacc 32404738  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
     ||| ||| | ||| ||||||  || |  ||||||||  ||||   || ||||| ||||  ||||||| ||||| ||||| ||| ||||||||||||| |    
T  32404737 tgtagattctatagtaaggagagtagagaagatggaggatagt---catatcacaagaggtagaggaagacctacaaaaactataagagaaactattagg 32404641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 362 - 543
Target Start/End: Complemental strand, 3819146 - 3818968
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||||||||||| |||||||  ||||||||| ||||| ||||||  |||  ||||||||||||| ||  ||| |||  ||  ||| | ||| || |||    
T  3819146 agagagttgaggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagag 3819047  T
Q  462 cataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
      || ||||||||||| ||| |   || | ||||||||| ||||||| |||| |||||| ||| ||||||||||||||||||    
T  3819046 agtagatcagatggagggtaat---caaaccactagagaaagaggaagaccttgaaaaactataagagaaactattaagaaa 3818968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 34792660 - 34792557
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||| | ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  34792660 ttaggaatgaaaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacc 34792561  T
Q  441 cgta 444  Q
    ||||    
T  34792560 cgta 34792557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 543
Target Start/End: Original strand, 8796226 - 8796379
Alignment:
Q  387 agaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgc 486  Q
    |||||| | |||||||| ||||||||| |||||||| |||| || || | |||  |||  ||| |||| ||||||  |||||| |||||||  ||||       
T  8796226 agaaaacaaggtggaaaataggtttaggtggtttggacatgtagagataagacatgtaggtttcgtagtaaggagagtaaatcggatggaggatagt--- 8796322  T
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| |||||||| ||| | ||||| | | ||||||||||||||||||    
T  8796323 cagatcactagaggcagaggaagaccaataaaaactttaagagaaactattaagaaa 8796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 543
Target Start/End: Complemental strand, 48431679 - 48431518
Alignment:
Q  379 cctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagc 478  Q
    |||||| ||||||||| |||||||| |||| |||| ||||||||||||| || |||| |||  ||| ||||||||| || |||  |  |||||||||||     
T  48431679 cctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggagg 48431580  T
Q  479 gtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
     ||||   | ||| || ||||  ||||||| ||| | ||||| ||| ||||||||||||||||||    
T  48431579 atagt---cggattacaagaggtagaggaagacccaaaaaaactataagagaaactattaagaaa 48431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 27848153 - 27848017
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||| ||||||||  |||| | |||| || ||| ||| ||| ||||||| ||||||||| |||| ||||| |  ||||||||| ||| |||    
T  27848153 gttgtgttggatgagtggtaagactagacgggata-ggataggaataacaccattagagagagagttgtggtagcacctgtggtagaaaagatggtagaa 27848055  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    | || | |||| |||||||||||||||| |||| ||||    
T  27848054 aataagcttaggtggtttgggcatgcagagagaagacc 27848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 35828861 - 35828780
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgg 422  Q
    ||||||||||||| |||||| ||||||||   ||| |||||||  ||||||||| |||||||| |||| |||| ||||||||    
T  35828861 ttagaaatgacaatattagagagagagtttgagtagcacctatggtagaaaagatggtggaaaatagggttaggtggtttgg 35828780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 40419577 - 40419730
Alignment:
Q  308 gttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    ||||||||| ||||||   |||| ||||||   |||||||||||||||||||| ||||||||| ||||  || |||| ||||| ||| ||| | ||||||    
T  40419577 gttgaatgtatggtaaaactagatgagatagaattagaaatgacaacattagagagagagttggggtagaacttatagtagaatagatggtagtaactag 40419676  T
Q  408 gtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
      |||  ||||||||||||| || |||| |||  ||  ||| ||||||||||||    
T  40419677 acttaagtggtttgggcatgtagagagaagacatgtggattatgtagcaaggag 40419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 424
Target Start/End: Original strand, 16943109 - 16943228
Alignment:
Q  304 ttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaa 403  Q
    |||||||| ||| ||| ||||  |||| ||||||   ||||| || |||| |||||  ||||||||| ||||  ||||||| ||||||||| ||||||||    
T  16943109 ttgtgttggatgcgtgataagactagacgagataaaattagacattacaatattagggagagagttggggtagtacctatagtagaaaagatggtggaaa 16943208  T
Q  404 ctaggtttagttggtttgggc 424  Q
    |||| ||||| ||||||||||    
T  16943209 ctagatttag-tggtttgggc 16943228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 7921837 - 7921892
Alignment:
Q  372 ggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||| ||||||| ||||||||| |||||||||||||||||  |||||||| ||||    
T  7921837 ggtaaaacctatagtagaaaagatggtggaaactaggtttatgtggtttggacatg 7921892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 8343149 - 8343070
Alignment:
Q  361 tagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||| |||| |||||||||| || ||||||||| ||||||||||||| |||| |||  |||||||| || |||| ||||    
T  8343149 tagagtgttggggtaacacctttagtagaaaagatggtggaaactaggcttaggtggactgggcatgtagagagaagacc 8343070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 444
Target Start/End: Original strand, 22090088 - 22090170
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  22090088 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacccgta 22090170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 32231265 - 32231179
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| |||||||   ||| |||| |||| |||| |||||||||||||    
T  32231265 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttgggcatg 32231179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 520
Target Start/End: Complemental strand, 38877652 - 38877478
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||||||||||  ||||||||| | || || |||| ||||||||||  ||  ||| | || |||| ||||||  ||||| || |||||||||    
T  38877652 ttagaaatgacaacattag--agagagttgggttagcatctatcatagaaaagattgtaaaaattcggcttaggtggtttaagcatgtagagagatgacc 38877555  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaa 520  Q
     ||| |||||| |||||||||  || |  |||||||| |||||   || ||||||| || |||||||| |||||| ||||    
T  38877554 tgtagattttgcagcaaggagggtagactagatggagtgtagt---caaatcactataggcagaggaagacctaggaaaa 38877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 539
Target Start/End: Complemental strand, 8343046 - 8342997
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaa 539  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||| |||||    
T  8343046 atcactagagatagaggaagacctagaaaaactataagagaaacaattaa 8342997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 43375889 - 43375829
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||||||| |||||  ||||||||| ||||| ||||||| | |||||||||||||||    
T  43375889 ttagaaatgacaatattaggaagagagttggggtaa-acctatagttgaaaagacggtggaa 43375829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 8671891 - 8671992
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| |||||||  |||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| || |    
T  8671891 ttaggaatgacaccattaga--gagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatc 8671988  T
Q  441 cgta 444  Q
    ||||    
T  8671989 cgta 8671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 542
Target Start/End: Original strand, 10272375 - 10272427
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    ||||||||||  || |||| |||||||||| |||| |||||||||||||||||    
T  10272375 atcactagaggtaggggaagacctagaaaacttataagagaaactattaagaa 10272427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 13827992 - 13827948
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttg 421  Q
    |||||||| ||||||||| ||||||||||||| |||| |||||||    
T  13827992 cacctatagtagaaaagatggtggaaactagggttaggtggtttg 13827948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 39422390 - 39422287
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||  |||||||||| | ||| | ||||||   ||||||||||||| |||||| |||||||||  ||||||| |||| |||||||||  || |||    
T  39422390 gttgtgttagatgtgtggtaggattatatgagatagaattagaaatgacaatattaga-agagagttggagtaacacatatagtagaaaagatagtagaa 39422292  T
Q  403 actag 407  Q
    |||||    
T  39422291 actag 39422287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 444
Target Start/End: Original strand, 51602058 - 51602130
Alignment:
Q  372 ggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  51602058 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 51602130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 375
Target Start/End: Complemental strand, 52442853 - 52442781
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggta 375  Q
    ||||||||| ||||||||||||  ||||  ||||| | |||||||||| |||||| || ||||||||| ||||    
T  52442853 gttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacattggagagagagttggggta 52442781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 33709895 - 33709981
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  33709895 ttagaaatggcaacattagagagagagttggggtaacacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatg 33709981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 539
Target Start/End: Original strand, 54470150 - 54470373
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggttta 412  Q
    ||||||||||||  |||| | |||| | || ||||| ||||||||||| ||||||||| |||| |||||||| ||||||||| ||||||||||||  |||    
T  54470150 atgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagttggggtagcacctatagtagaaaagatggtggaaactagactta 54470249  T
Q  413 gttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacc 512  Q
      ||||||||||||| || |||| |||  ||| ||| ||||| ||||||  ||||||| |||||| |||||   || || ||||||| || | ||| |||    
T  54470250 agtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaaatggagagtagt---caaattactagaggcaaaagaagacc 54470346  T
Q  513 tagaaaaattatgagagaaactattaa 539  Q
     ||||||| ||| |||||| |||||||    
T  54470347 aagaaaaactataagagaatctattaa 54470373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 427
Target Start/End: Original strand, 49987361 - 49987485
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||||||||||||| | |||||  ||||   |||| | ||||||||||||||||||||||||||||   ||| ||||||||| ||||||||| |||||||    
T  49987361 gttgtgttgaatgtttagtaagactagacatgataggattagaaatgacaacattagatagagagtctgggtcacacctatagtagaaaagatggtggaa 49987460  T
Q  403 actaggtttagttggtttgggcatg 427  Q
    | |||| |||| |||||||| ||||    
T  49987461 aataggcttaggtggtttggtcatg 49987485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 427
Target Start/End: Complemental strand, 51252807 - 51252686
Alignment:
Q  304 ttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaa 403  Q
    |||||||  |||||| |||||  |||| |||||| | ||||||||||| ||||||||  |||||||| |||| ||||| || ||||||||| ||||||||    
T  51252807 ttgtgttagatgtgtcgtaagactagacgagataggattagaaatgactacattaga--gagagttggggtagcacctctagtagaaaagatggtggaaa 51252710  T
Q  404 ctaggtttagttggtttgggcatg 427  Q
    ||||| |||| |||| ||||||||    
T  51252709 ctaggcttaggtggtatgggcatg 51252686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 10775733 - 10775667
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||||||||||||||||||| |||| |||| ||||||||||||| ||||||||| ||| ||||||||    
T  10775733 ttagaaatgacaacattagagagagtgttggggtaacacctatagtagaaaagatggtagaaactag 10775667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 44047659 - 44047573
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||||| ||||||||| |||| |||||||| ||||||||  ||| ||| ||||| |||| |||||||| ||||    
T  44047659 ttagaaatgacaacattagagagagagttggggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatg 44047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 346 - 444
Target Start/End: Original strand, 53707770 - 53707868
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| ||||||| ||||||| |||||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  53707770 aatgacaccattagaaagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 53707868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 303 - 444
Target Start/End: Original strand, 56375223 - 56375364
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| ||| ||||||||  ||||  ||||| | |||| ||||||| ||||||| ||||||| | |||| |||||||||||||||||  ||| |||    
T  56375223 gttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattagagagagagtaggggtagcacctataatagaaaagttggtagaa 56375322  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |  ||| |||| ||||||||||||| || |||| ||||||||    
T  56375323 aacaggcttagatggtttgggcatgtagagagaagacccgta 56375364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 25257890 - 25257793
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||||||||||||||||  |||||||||||||||||||| |||| |||||| ||| ||| ||||  |||| ||||||| ||||| || |||| ||||    
T  25257890 ttagaaatgacaacattaga--gagagttgaggtaacacctacaatataaaagatggtagaagctagacttaggtggtttgagcatgtagagagaagacc 25257793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 543
Target Start/End: Complemental strand, 13805507 - 13805377
Alignment:
Q  410 ttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaac 509  Q
    |||| ||||||||| ||| || |||| ||||  || ||||||||||||||||  || |||| ||||||  | ||   ||||||||||||| ||||||||     
T  13805507 ttaggtggtttgggtatgtagagagaagacctttagattttgtagcaaggagactagatcacatggaggattgt---cagatcactagaggcagaggaaa 13805411  T
Q  510 acctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||| ||| ||||||||||| ||||||    
T  13805410 acctagaaaaactataagagaaactatgaagaaa 13805377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 31960125 - 31960022
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  31960125 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 31960026  T
Q  441 cgta 444  Q
    ||||    
T  31960025 cgta 31960022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 48174404 - 48174301
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | ||||||||||||| ||||||||  ||| |||| |||| |||| || |||||||||| || |||| ||||    
T  48174404 ttaggaatgacaccattagagagagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacc 48174305  T
Q  441 cgta 444  Q
    ||||    
T  48174304 cgta 48174301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 52569826 - 52569723
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  52569826 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 52569727  T
Q  441 cgta 444  Q
    ||||    
T  52569726 cgta 52569723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 37797823 - 37797909
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||| ||||||| ||||||| |||||| |||||||| ||||||||  ||| |||| |||| |||| |||||||| ||||    
T  37797823 ttagaaatgacaccattagagagagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatg 37797909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 45569174 - 45569120
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||    
T  45569174 atcactagaggcagaggaagacctagaaacattataagagaaactattaagaaaa 45569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 407
Target Start/End: Original strand, 17900413 - 17900517
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| ||||||||||||  |||| | ||||   ||||||||||| |||||||| |  |||||| |||| |||||||| ||||||||||||| |||    
T  17900413 gttgcgttggatgtgtggtaagactagatgggataaaattagaaatgacgacattagagacggagttggggtagcacctatagtagaaaagacggtagaa 17900512  T
Q  403 actag 407  Q
    |||||    
T  17900513 actag 17900517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 427
Target Start/End: Complemental strand, 38571095 - 38570972
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||  || |||  ||||| | || |||||||||||||| || |||||| || || | |||||||| || ||||||  ||||||    
T  38571095 gttgtgttggatgtgtggtacact-agacaagataggattggaaatgacaacatttgagagagagctggggaagcacctatagtacaaaagatagtggaa 38570997  T
Q  403 actaggtttagttggtttgggcatg 427  Q
    |||||| |||| |||||||||||||    
T  38570996 actaggcttaggtggtttgggcatg 38570972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 49987526 - 49987578
Alignment:
Q  491 tcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||| |||||||| ||||||||||| ||| ||||||||||||||||||    
T  49987526 tcactagaggcagaggaagacctagaaaaactataagagaaactattaagaaa 49987578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 10209009 - 10209141
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||||||||||||||||    |||||| ||||  ||||||| ||||||||| ||  |||||||   |||||||||||||||||| || |||| ||||    
T  10209009 ttagaaatgacaacattaga----gagttggggtagaacctatagtagaaaagatggcagaaactaaacttagttggtttgggcatgtagcgagaagacc 10209104  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggag 477  Q
     ||  ||||| ||| ||||||  || |||||||||||    
T  10209105 tgtgaattttttagtaaggagagtagatcagatggag 10209141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 392
Target Start/End: Original strand, 20998955 - 20999034
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaa 392  Q
    |||||| |||||  |||| |||||| | |||||||||| || ||||||||| |||||| ||||||||||||| |||||||    
T  20998955 atgtgttgtaagactagacgagataggattagaaatgataatattagatagggagttggggtaacacctatactagaaaa 20999034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 303 - 419
Target Start/End: Complemental strand, 31403369 - 31403250
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattag----atagagagttgaggtaacacctataatagaaaagacggt 398  Q
    |||| |||||||||||||| || ||||| | |||| | |||||||||||||||||||    | | ||||||| |||| |||||||| ||||||| | |||    
T  31403369 gttgagttgaatgtgtggtgagattagacgggataggattagaaatgacaacattagagacagatagagttggggtagcacctatagtagaaaa-atggt 31403271  T
Q  399 ggaaactaggtttagttggtt 419  Q
    |||||||||| |||| |||||    
T  31403270 ggaaactaggcttaggtggtt 31403250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 543
Target Start/End: Original strand, 47147453 - 47147543
Alignment:
Q  450 tgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||| ||||||  |||||||||||||| ||||| |   ||||||||||| |||||||| ||||||||||| |||   ||||||||||||||||    
T  47147453 tgtagtaaggagagtaaatcagatggagagtagtcg---gatcactagaggcagaggaagacctagaaaaactatagaagaaactattaagaaa 47147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 444
Target Start/End: Original strand, 33227185 - 33227283
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| | ||||||||||| || |||| ||||||||    
T  33227185 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagattgtttgggcatgtagagagaagacccgta 33227283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 34233192 - 34233142
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactatt 537  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||||||||||||    
T  34233192 cagatcactagaggcagaggaaaacctagaaaaactatcagagaaactatt 34233142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 406
Target Start/End: Complemental strand, 43070113 - 43070014
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| |||||||||||| |||||   |||| | ||||||||||||||||||||    ||||||||||| | |||||| |||||| || |||||||    
T  43070113 gttgggttggatgtgtggtaagattagacaggataggattagaaatgacaacattaga----gagttgaggtagcgcctatagtagaaatgatggtggaa 43070018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 420
Target Start/End: Original strand, 50662322 - 50662437
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||| | ||||||||||||  || | |||||| | || ||||||||| ||||||  ||||||||  || |||||||||| ||||||||| |||||||    
T  50662322 gttgtgtaggatgtgtggtaagactatatgagataggattggaaatgacagcattag--agagagtttgggcaacacctatagtagaaaagatggtggaa 50662419  T
Q  403 actaggtttagttggttt 420  Q
    | |||| |||| ||||||    
T  50662420 agtaggcttaggtggttt 50662437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 405
Target Start/End: Original strand, 45423552 - 45423650
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||||||||  |||||||||||  |||| | ||||   |||||||||||||||||| |    ||||||||||| |||||||||||||||||| ||| |||    
T  45423552 gttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaacattata----gagttgaggtagcacctataatagaaaagatggtagaa 45423647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 420
Target Start/End: Original strand, 50680672 - 50680789
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||||||||||||||| | |||  || | || ||| | || ||||| ||||||||||| ||||||||  || |||||||||| | ||||||| |||||||    
T  50680672 gttgtgttgaatgtgtagcaagactatatgacataggattggaaataacaacattagagagagagttagggcaacacctatagttgaaaagatggtggaa 50680771  T
Q  403 actaggtttagttggttt 420  Q
    | |||| |||| ||||||    
T  50680772 aataggcttaggtggttt 50680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 50471499 - 50471596
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||| ||||||||||||||  |||| | | |||| |||  ||| ||||||||| |||||||||||||||||  ||||||||||||| || |||| ||||    
T  50471499 ttagagatgacaacattaga--gagactcggggtagcactaatagtagaaaagatggtggaaactaggtttaagtggtttgggcatgtagagagaagacc 50471596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 53540404 - 53540460
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| |||||||| ||||||||||| ||| ||| ||||||||| ||||    
T  53540404 cagatcactagaggcagaggaagacctagaaaaactataagataaactattaggaaa 53540460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 28236156 - 28236240
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||| ||||||| |||||||  |||||| | |||| |||||||| ||||||||  |||||||| |||| |||| |||||||||||||    
T  28236156 ttaggaatgacaccattaga--gagagtgggggtagcacctatagtagaaaagttggtggaaaataggcttagatggtttgggcatg 28236240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 477
Target Start/End: Original strand, 28497459 - 28497596
Alignment:
Q  341 ttagaaatgacaacattagatagagag--ttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatga 438  Q
    |||||||||||||||| ||| ||||||  ||| |||| ||||| || |||||||||  |||||||  ||| |||| ||||||||||||| || |||| ||    
T  28497459 ttagaaatgacaacatcagagagagagagttggggtagcacctttagtagaaaagattgtggaaaa-aggcttaggtggtttgggcatgtagagagaaga 28497557  T
Q  439 cccgtacattttgtagcaaggagcataaatcagatggag 477  Q
    |  ||| ||| ||||| ||||||  || |||||||||||    
T  28497558 cttgtagattatgtagtaaggagagtagatcagatggag 28497596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 31459024 - 31459087
Alignment:
Q  364 agagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||| |||||| |||||||| ||||||||| ||| |||| |||| |||| |||||||||||||    
T  31459024 agagtcgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatg 31459087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 33191159 - 33191056
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||  |||| | ||||||||||| || |||| ||||    
T  33191159 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagattgtttgggcatgtagagagaagacc 33191060  T
Q  441 cgta 444  Q
    ||||    
T  33191059 cgta 33191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 407
Target Start/End: Original strand, 44360016 - 44360124
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagat----agagagttgaggtaacacctataatagaaaagacggt 398  Q
    ||||||||| |||||||||| |  |||  ||||||   ||||||||||||| |||||||    ||||||||| |||| |||||||| ||||||||| |||    
T  44360016 gttgtgttggatgtgtggtaggactaggcgagatagaattagaaatgacaatattagatggagagagagttggggtatcacctatagtagaaaagatggt 44360115  T
Q  399 ggaaactag 407  Q
     ||||||||    
T  44360116 agaaactag 44360124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 461
Target Start/End: Complemental strand, 46715678 - 46715563
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||||||||||| ||||||  |||    |||||||  ||||||||| ||||||||||||| |||| |||| |||||||| || |||| |||     
T  46715678 ttagaaatgacaacattagagagagaga-gag----cacctattgtagaaaagatggtggaaactaggcttaggtggtgtgggcatgtagagagaagaca 46715584  T
Q  441 cgtacattttgtagcaaggag 461  Q
     ||  ||| ||||||||||||    
T  46715583 tgtggattatgtagcaaggag 46715563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 7682075 - 7682021
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||||| |||||||| |||| |||||| ||| ||||||||||| |||||||    
T  7682075 atcactagaggcagaggaagacctggaaaaactataagagaaactatcaagaaaa 7682021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 444
Target Start/End: Original strand, 43433916 - 43433998
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  43433916 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 43433998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 444
Target Start/End: Complemental strand, 47265508 - 47265410
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| ||||| | ||||||| | ||||||||||||| ||||||||   || |||| ||||||||| || |||||||||| || |||| ||| ||||    
T  47265508 aatgacaccattatagagagagtgggggtaacacctatagtagaaaaggtagtagaaaataggtttagatgatttgggcatgtagagagaagacacgta 47265410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 543
Target Start/End: Complemental strand, 33225978 - 33225945
Alignment:
Q  510 acctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||||| ||||||||||||||||||    
T  33225978 acctagaaaaattataagagaaactattaagaaa 33225945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 38865803 - 38865758
Alignment:
Q  493 actagagacagaggaacacctagaaaaattatgagagaaactatta 538  Q
    |||||||||| ||||| || |||||||| |||||||||||||||||    
T  38865803 actagagacataggaagacgtagaaaaactatgagagaaactatta 38865758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 2588914 - 2588970
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattag 359  Q
    |||| |||| ||||||||||||  |||||| |||| | |||||||||||||||||||    
T  2588914 gttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaacattag 2588970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 34233382 - 34233291
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacatt--agatagagagttgaggtaacacctataatagaaaa 392  Q
    ||||||||| ||||||| ||||  |||| | |||| | ||||||| |||||||||  ||||||||||||| | || |||||||| |||||||    
T  34233382 gttgtgttggatgtgtgataagactagatgtgataggattagaaacgacaacattagagatagagagttgggatagcacctatagtagaaaa 34233291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 426
Target Start/End: Complemental strand, 35555937 - 35555873
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    ||||||||  |||| |||||||| ||||||||| ||| ||||||||  |||| ||||||||||||    
T  35555937 agagagttcgggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcat 35555873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 37488205 - 37488261
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||| | || |||||| | ||||||||||| ||| ||||||||||||||||||    
T  37488205 cagatcaccataggcagaggtagacctagaaaaactataagagaaactattaagaaa 37488261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 37773731 - 37773659
Alignment:
Q  372 ggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |||| |||||||| |||||||| |||| |||| |||| |||| ||||||||||||| ||  ||| ||||||||    
T  37773731 ggtagcacctatagtagaaaagtcggtagaaaataggcttagatggtttgggcatgtagatagacgacccgta 37773659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 41192828 - 41192920
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtag 454  Q
    ||||||||| |||| |||||| | ||||||||| ||||||||||||  |||| || |||| ||||| || |||| |||| ||| ||| |||||    
T  41192828 agagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtag 41192920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 48622852 - 48622751
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| |||||||  |||||| | |||| |||| ||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  48622852 ttaggaatgacaccattaga--gagagtgggggtagcacccatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 48622755  T
Q  441 cgta 444  Q
    ||||    
T  48622754 cgta 48622751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 341 - 544
Target Start/End: Complemental strand, 7359570 - 7359371
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||||  ||||| |||||||| |||||||||||||| ||||||| | |||||||| ||||||||| |||||| |||||| || |||| ||      
T  7359570 ttagaaatgacaatgttagagagagagttcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtggttt-ggcatgtagagagaagata 7359472  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
     ||| ||| ||||| ||||||  || |||||||||||  ||||   || |||||||||| ||||||||  ||||||||||  || |||||||||||| ||    
T  7359471 tgtagattctgtagtaaggagagtagatcagatggaggatagt---catatcactagaggcagaggaaagcctagaaaaaccataagagaaactatttag 7359375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 542
Target Start/End: Original strand, 14749269 - 14749476
Alignment:
Q  332 gagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagt 431  Q
    |||||| | |||||||||| ||||||||| |||||||||  ||| |||||||| |||||||   ||| ||||||||  |||| |||||||| |||| ||     
T  14749269 gagataggattagaaatgaaaacattagagagagagttggtgtagcacctatagtagaaaaattggtagaaactagacttagatggtttggacatgtaga 14749368  T
Q  432 gagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaa 531  Q
    |||| |||| ||  ||| ||| | ||||||  |  ||||||||||| | |||   || ||||||| || |||||||| ||||||||||| ||| ||||||    
T  14749369 gagaagacctgtggattctgttgtaaggagagtcgatcagatggaggggagt---caaatcactaaaggcagaggaagacctagaaaaactataagagaa 14749465  T
Q  532 actattaagaa 542  Q
    ||||| |||||    
T  14749466 actatcaagaa 14749476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 542
Target Start/End: Complemental strand, 31636225 - 31636033
Alignment:
Q  345 aaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |||||||| |||||||  || ||||| |||| |||||||| ||||||||| ||| ||||||||  |||| ||||||||||||| || |||| |||||||     
T  31636225 aaatgacagcattaga--gaaagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtg 31636128  T
Q  445 cattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
     || |||||| ||||||  || || |||||| | | |||   || ||||||||||| || |||| | ||||||||| ||| ||||||||||| |||||    
T  31636127 gatgttgtagtaaggagagtagattagatggtggggagt---caaatcactagagataggggaagatctagaaaaactattagagaaactatcaagaa 31636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 342 - 543
Target Start/End: Complemental strand, 15489802 - 15489604
Alignment:
Q  342 tagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgaccc 441  Q
    |||| |||| || |||||| ||||||||| ||||  ||||||  ||||||||| ||| ||||||  | |||| ||||||||||||| || |||| ||       
T  15489802 tagacatgataagattagagagagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagattt 15489703  T
Q  442 gtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaaga 541  Q
    ||| ||||||||  ||||||  || || ||||||||  ||||||    |||||||||| |||||||| |||||||||||  || ||||||||||||||||    
T  15489702 gtagattttgtattaaggagagtagattagatggaggatagttga---atcactagaggcagaggaagacctagaaaaacaataagagaaactattaaga 15489606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 477
Target Start/End: Original strand, 43475247 - 43475347
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatgga 476  Q
    |||||||| ||||||||| ||||||||||||| |||| ||||||||| || ||| |||| |||| ||| || |||||| ||||||  || ||||||||||    
T  43475247 cacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagatgga 43475346  T
Q  477 g 477  Q
    |    
T  43475347 g 43475347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 2075785 - 2075682
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||||||||||| ||||||| | ||||||||||| | ||||||||  ||| || | |||| |||| ||||||||||||| || |||| ||||    
T  2075785 ttaggaatgacaacattagagagagagtgggggtaacacctacagtagaaaagttggtagacaataggcttagatggtttgggcatgtagagagaagacc 2075686  T
Q  441 cgta 444  Q
    ||||    
T  2075685 cgta 2075682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 362 - 542
Target Start/End: Original strand, 2712936 - 2713113
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    ||||||||| |||| |||||||| |  |||||| ||| || |||||  |||| ||||||||||||| || |||| |||| ||  ||| ||||  ||||||    
T  2712936 agagagttggggtagcacctatagtctaaaagatggtagagactagacttaggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggag 2713035  T
Q  462 cataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
      || |||||||||||   |||   || |||||||||| ||| |||| ||||||||||| ||| |||||||||||||||||    
T  2713036 agtagatcagatggaggagagt---caaatcactagagtcaggggaagacctagaaaaactataagagaaactattaagaa 2713113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 420
Target Start/End: Original strand, 32516491 - 32516606
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||||  ||||   ||||   |||||||||||||||||||  |||||||||  ||||||| |||| ||||||||| |||||||    
T  32516491 gttgtgttggatgtgtggtaagactagacaggatagacttagaaatgacaacattag--agagagttggagtaacacttatagtagaaaagatggtggaa 32516588  T
Q  403 actaggtttagttggttt 420  Q
    | |||| |||| ||||||    
T  32516589 aataggcttaggtggttt 32516606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 33667189 - 33667286
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||||||||||||||    |||||||| |||| |||||||| ||||||||| ||| ||||||||  |||| ||||||||||||| || |||| ||||    
T  33667189 ttagaaatgacaacattaac--gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacc 33667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 4496355 - 4496458
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| | ||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  4496355 ttaggaatgacacctttagagagagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacc 4496454  T
Q  441 cgta 444  Q
    ||||    
T  4496455 cgta 4496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 543
Target Start/End: Original strand, 42199302 - 42199456
Alignment:
Q  386 tagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttg 485  Q
    ||||||||| ||||||||||||  |||| ||||||||||||| || |||| |||  ||| ||| ||||| ||||||  || |||| |||||| |||||      
T  42199302 tagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggagagtagt-- 42199399  T
Q  486 ccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
     || |||||||| |  |||| || ||||||||||| ||| ||| |||||||| |||||    
T  42199400 -caaatcactagggggagagaaagacctagaaaaactattagacaaactatttagaaa 42199456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 444
Target Start/End: Original strand, 24178486 - 24178584
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| |||||||||||||  | |||| ||||||||    
T  24178486 aatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacccgta 24178584  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 308 - 543
Target Start/End: Original strand, 6888931 - 6889163
Alignment:
Q  308 gttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||| ||||||||||||  |||| |||||| | ||||||||||||| |||| | | ||||||| |||| ||| ||||   ||||||| |||||||| |||    
T  6888931 gttggatgtgtggtaagactagatgagatatgattagaaatgacaatattacagaaagagttggggtagcacgtatagaggaaaagatggtggaaaatag 6889030  T
Q  408 gtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagagga 507  Q
    | |||  |||||||| |||| || |||| |||  ||  ||| ||| | |||||  |||||| ||||||||  ||||   || | |||| |||  ||||||    
T  6889031 gcttaagtggtttggacatgtagagagaagacttgtggattatgtggtaaggacaataaattagatggaggatagt---caaaccacttgaggaagagga 6889127  T
Q  508 acacctagaaaaattatgagagaaactattaagaaa 543  Q
    |  |||||||||| ||| ||||||||||||| ||||    
T  6889128 aggcctagaaaaactataagagaaactattaggaaa 6889163  T

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Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 9235163 - 9235217
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| |||||||| ||||||||||| ||  ||||||||||||||||||    
T  9235163 cagatcactagaggcagaggaagacctagaaaaacta--agagaaactattaagaaa 9235217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 345 - 426
Target Start/End: Complemental strand, 18351215 - 18351134
Alignment:
Q  345 aaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    ||||||||||||| || | | ||||| |||| |||||||| ||||||| | ||| ||||||||| |||| ||||||||||||    
T  18351215 aaatgacaacattggacatatagttggggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgggcat 18351134  T

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Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 348 - 426
Target Start/End: Complemental strand, 43558133 - 43558053
Alignment:
Q  348 tgacaacattagatagagag--ttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    ||||||||||||| ||||||  ||  |||| || ||||||||||||||| ||||||||||| | |||| ||||||||||||    
T  43558133 tgacaacattagagagagagagttagggtagcatctataatagaaaagatggtggaaactaagcttaggtggtttgggcat 43558053  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 426
Target Start/End: Original strand, 30588396 - 30588505
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggttta 412  Q
    |||||||||||| | | | |||||| | ||||||||||||| ||||||    |||||   ||||||  |||||||||||||| |||||||| ||||||||    
T  30588396 atgtgtggtaagatcaaatgagatatgattagaaatgacaatattaga----gagttagagtaacatgtataatagaaaagatggtggaaaataggttta 30588491  T
Q  413 gttggtttgggcat 426  Q
      ||||||||||||    
T  30588492 agtggtttgggcat 30588505  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 426
Target Start/End: Complemental strand, 34194845 - 34194724
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| |||||||||||   ||||   |||| | |||||||||  |||||||||  |||||||| | |||||||||||| | |||||| |||||||    
T  34194845 gttgtgttggatgtgtggtaaaactagacaggataggattagaaatgtaaacattaga--gagagttgggataacacctataacataaaagatggtggaa 34194748  T
Q  403 actaggtttagttggtttgggcat 426  Q
    || |||  ||| ||||||||||||    
T  34194747 accaggcctaggtggtttgggcat 34194724  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 1275236 - 1275338
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| || |    
T  1275236 ttaggaatgacaccattagagagagagtgg-ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatc 1275334  T
Q  441 cgta 444  Q
    ||||    
T  1275335 cgta 1275338  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 11002732 - 11002648
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||||||||||||||||  |||||||  |||| |||||| | ||||||| | ||| ||||||||  |||| |||||||||||||    
T  11002732 ttagaaatgacaacattaga--gagagttcgggtagcacctacagtagaaaacatggtagaaactagacttaggtggtttgggcatg 11002648  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 544
Target Start/End: Complemental strand, 3775232 - 3775178
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||||| |||| ||| ||||||||||| ||| ||| |||||||||||||||    
T  3775232 atcactagaggcagaagaagacctagaaaaactataagataaactattaagaaaa 3775178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 545
Target Start/End: Original strand, 5305753 - 5305811
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaat 545  Q
    ||||||||||||| |||||||| ||||||||||| |||  |||||||||| | ||||||    
T  5305753 cagatcactagaggcagaggaagacctagaaaaactatatgagaaactatcatgaaaat 5305811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 440
Target Start/End: Original strand, 34273019 - 34273097
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    ||||||| | |||| |||||||||||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  34273019 agagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 34273097  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 460
Target Start/End: Complemental strand, 4026679 - 4026527
Alignment:
Q  307 tgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaacta 406  Q
    ||||| ||||||||||||  |||| |||||| | ||| ||| || ||||| | | ||||||||| |||||||| || | || |||||| |||||||||||    
T  4026679 tgttgtatgtgtggtaagactagatgagataagattaaaaacgagaacatga-agagagagttggggtaacacgtaaagtaaaaaagatggtggaaacta 4026581  T
Q  407 ggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaagga 460  Q
    |  |||| |||||||| |||| || |||  |||| ||| ||| ||||| |||||    
T  4026580 gtcttaggtggtttggacatgtagagaggagacctgtagattctgtagtaagga 4026527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 9917615 - 9917562
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||| ||||||||||||  ||||||||||| ||| |||||||||||| |||||    
T  9917615 atcacaagagacagaggatgacctagaaaaactattagagaaactatttagaaa 9917562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 12577025 - 12576972
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| |||||||| ||||||||||| ||  ||| ||||||||||||||    
T  12577025 atcactagaggcagaggaagacctagaaaaactacaagataaactattaagaaa 12576972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 528
Target Start/End: Original strand, 21952284 - 21952512
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacatt--agatagagagttgaggta----acacctataatagaaaagacg 396  Q
    |||| |||| ||||||||||||  |||| |||||| | |||||||||||| ||||  ||| |||| |||| ||||    ||||||||| ||||||||| |    
T  21952284 gttgcgttgcatgtgtggtaagactagacgagataagattagaaatgacagcattaaagagagagggttggggtaacacacacctatagtagaaaagatg 21952383  T
Q  397 gtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcacta 496  Q
    |  ||||||||  | || |||||||| |||| || |||| | || ||  ||| | ||| |||||| ||| ||||||||||| | |||   || |||||||    
T  21952384 gcagaaactagactcaggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggaggggagt---caaatcacta 21952480  T
Q  497 gagacagaggaacacctagaaaaattatgaga 528  Q
    |||  || |||| ||||||||||| |||||||    
T  21952481 gaggtaggggaagacctagaaaaactatgaga 21952512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 6788181 - 6788237
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| |||||||| ||||||||||| ||| | || |||||||| ||||    
T  6788181 cagatcactagaggcagaggaagacctagaaaaactatcaaaggaactattaggaaa 6788237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 12492698 - 12492592
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacaccta---taatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatg 437  Q
    |||| ||||||| ||||||| ||||||| | |||| ||||||   || ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| |    
T  12492698 ttaggaatgacaccattagagagagagtgggggtagcacctactatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaag 12492599  T
Q  438 acccgta 444  Q
    |||||||    
T  12492598 acccgta 12492592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 33006595 - 33006664
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggt 374  Q
    ||||||||||||||||  |||| ||||| ||||||   ||| |||||||||||||||  |||||||||||||    
T  33006595 gttgtgttgaatgtgttctaagattagacgagataaaattaaaaatgacaacattag--agagagttgaggt 33006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 312 - 543
Target Start/End: Complemental strand, 39601021 - 39600793
Alignment:
Q  312 aatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggttt 411  Q
    |||||||||||||  |||| | |||| | |||||||||||||||||||| ||||||||| ||||  ||||||| ||||||||| ||||||||  | | ||    
T  39601021 aatgtgtggtaagactagatgggataagattagaaatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaaacaagctt 39600922  T
Q  412 agttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacac 511  Q
    || |||||| |||||| |  |||| |||| ||| ||| |||||| |||||  || ||||||| |||  ||||   |||||  | ||||  ||||||| ||    
T  39600921 aggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggatagt---cagattgcaagaggtagaggaagac 39600825  T
Q  512 ctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||| ||| ||||||||||||||||||    
T  39600824 ctagaaaaactataagagaaactattaagaaa 39600793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 477
Target Start/End: Original strand, 19736929 - 19737104
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaa-cacctataatagaaaagacggtgga 401  Q
    ||||||||| ||| ||||||||  |||| | |||||| |||||| ||| | ||||||| ||||||||| ||  | |||||||| ||||||||| ||| ||    
T  19736929 gttgtgttggatgagtggtaagactagacgggatacgattagaagtgaaatcattagagagagagttgggggcagcacctatagtagaaaagatggtaga 19737028  T
Q  402 aactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggag 477  Q
    || ||||||||| ||||||| |||||||| |||| |||| ||| || |||||| ||| ||  || |||||||||||    
T  19737029 aaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggag 19737104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 477
Target Start/End: Original strand, 19757832 - 19758007
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaa-cacctataatagaaaagacggtgga 401  Q
    ||||||||| ||| ||||||||  || | |||||||| |||||| ||| | ||||||| ||||||||| ||  | |||||||| ||||||||| ||| ||    
T  19757832 gttgtgttggatgagtggtaagactacacgagatacgattagaagtgaaatcattagagagagagttgggggcagcacctatagtagaaaagatggtaga 19757931  T
Q  402 aactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggag 477  Q
    || ||||||||| ||||||| |||||||| |||| |||| ||| || |||||| ||| ||  || |||||||||||    
T  19757932 aaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggag 19758007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 303 - 461
Target Start/End: Complemental strand, 36820308 - 36820152
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| ||||||||||||  |||| |||||| | ||||||||||| ||||||||  |||||||| |||| |||||||| ||| ||||| |||||||    
T  36820308 gttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattaga--gagagttggggtagcacctatattagcaaagatggtggaa 36820211  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||| |||| |||||| | |||| |  |||| ||||| || ||| ||||| ||||||    
T  36820210 actaggcttaggtggtttagacatgtaaagagaagacccatagattatgtagtaaggag 36820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 317 - 440
Target Start/End: Complemental strand, 49503889 - 49503766
Alignment:
Q  317 gtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttg 416  Q
    ||||||||  |||| |||||| | || | ||||||| ||||||| |||||||| ||||| |||||||| ||||||||| ||| |||| |||| |||| ||    
T  49503889 gtggtaagactagacgagataggattgggaatgacaccattagagagagagttcaggtagcacctatagtagaaaagatggtagaaaataggcttaggtg 49503790  T
Q  417 gtttgggcatgcagtgagatgacc 440  Q
    ||||||||||| || |||| ||||    
T  49503789 gtttgggcatgtagagagaagacc 49503766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 47233907 - 47233804
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||| ||||||| ||||| | |||||| |||||||| ||||||||  ||| |||| |||| |||| |||||||| |||| || |||| ||||    
T  47233907 ttagaaatgacaccattagagagagaatggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacc 47233808  T
Q  441 cgta 444  Q
    ||||    
T  47233807 cgta 47233804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 543
Target Start/End: Complemental strand, 42510289 - 42510128
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatgga 476  Q
    |||||||| |||||||||  ||||||| |||| |||| |||||||| |||| ||  ||| ||||  || ||||||| | ||||||  || ||||||||||    
T  42510289 cacctatagtagaaaagatagtggaaaataggcttaggtggtttggacatgtag--agaagacctatagattttgtggtaaggagagtagatcagatgga 42510192  T
Q  477 gcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |  ||||   ||||||||||||| || ||||| ||||||||||| ||| |||||||| |||| ||||    
T  42510191 ggatagt---cagatcactagaggcaaaggaagacctagaaaaactatcagagaaaccattaggaaa 42510128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 427
Target Start/End: Original strand, 54128354 - 54128435
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||| ||||||| |||| |||| |||| |||||||| ||||||||| ||| |||| |||| |||| |||||||||||||    
T  54128354 aatgacaccattagagagagtgttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatg 54128435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 29600861 - 29600957
Alignment:
Q  332 gagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactagg-tttagttggtttgggcatg 427  Q
    |||||| | |||||||||||||||||||| |||||||||  ||||| | |||| || |||||| ||| |||| |||| ||||| |||||||||||||    
T  29600861 gagatatgattagaaatgacaacattagagagagagttgtcgtaacgcttatagtaaaaaagatggtagaaaataggttttagatggtttgggcatg 29600957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 543
Target Start/End: Original strand, 21200564 - 21200718
Alignment:
Q  386 tagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttg 485  Q
    ||||||||| ||||||||||||  |||| ||||||||||||| || |||| |||  ||| ||| || || ||||||  || |||| |||||| |||||      
T  21200564 tagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcacatggagagtagt-- 21200661  T
Q  486 ccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
     || |||||||| |  ||||||| ||||||||||| ||| ||| |||||||| |||||    
T  21200662 -caaatcactagggggagaggaagacctagaaaaactattagacaaactatttagaaa 21200718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 489 - 544
Target Start/End: Complemental strand, 33755508 - 33755453
Alignment:
Q  489 gatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    ||||||||||| |||||||| ||||||||||| ||| ||||||||||||| |||||    
T  33755508 gatcactagaggcagaggaaaacctagaaaaactataagagaaactattaggaaaa 33755453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 440
Target Start/End: Original strand, 52138771 - 52138870
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  52138771 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 52138870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 3987018 - 3987100
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttggg 423  Q
    ||||||||||| | ||| || ||||||||| |||| |||||||| ||||||||| ||| ||||||||  |||| |||||||||    
T  3987018 ttagaaatgacgatattggagagagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttggg 3987100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 26388452 - 26388538
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||| | | ||||||| | ||||||||| |  |||||||||||||||||| ||| |||| ||||||||| || ||||||||||    
T  26388452 ttagaaattaaaccattagacatagagttgagatggcacctataatagaaaagatggtagaaaataggtttaggtgatttgggcatg 26388538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 50249355 - 50249421
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||||||||| ||||||||| ||||||||| |||| | | |||| ||||||||| ||||||||||||    
T  50249355 ttagaaatgataacattagagagagagttggggtagcgcgtatagtagaaaagatggtggaaactag 50249421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 31261107 - 31261054
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| |||||||| ||||||||||| ||| ||||||||||| ||||||    
T  31261107 atcactagaggcagaggaagacctagaaaaactataagagaaactatcaagaaa 31261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Original strand, 40982013 - 40982066
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||| ||||| ||||||||||| ||| |||| |||||||||||||    
T  40982013 atcactagagacaaaggaagacctagaaaaactataagagtaactattaagaaa 40982066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 440
Target Start/End: Complemental strand, 50960922 - 50960845
Alignment:
Q  363 gagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||| |||| |||||||| ||||||||| ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacc 50960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 26490309 - 26490372
Alignment:
Q  364 agagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||| |||||||| ||||||||| ||| |||| |||| |||| |||||||| ||||    
T  26490309 agagttgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatg 26490372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 28245408 - 28245511
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||  |||| ||||||||||||| || ||||  |||    
T  28245408 ttaggaatgacatcattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaatagacttagatggtttgggcatgtagagagaaaacc 28245507  T
Q  441 cgta 444  Q
    ||||    
T  28245508 cgta 28245511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 538
Target Start/End: Complemental strand, 40116636 - 40116585
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactatta 538  Q
    ||||||||||||| || ||||| ||||||||||| ||| |||||||||||||    
T  40116636 cagatcactagagccaaaggaagacctagaaaaactataagagaaactatta 40116585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 407
Target Start/End: Complemental strand, 31454536 - 31454471
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||||||||||||||||||| |||| |||| | || |||||||| ||||||||| ||| ||||||||    
T  31454536 ttagaaatgacaacattagagagagtgttg-gttagcacctatagtagaaaagatggtagaaactag 31454471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 543
Target Start/End: Complemental strand, 45289383 - 45289203
Alignment:
Q  362 agagagttgaggtaacacctat--aatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaagg 459  Q
    ||||||||| |||| |||||||  | ||||||||| |||||||| |||| |||| ||||||||||| | || ||||  ||  ||| ||||||||| |||     
T  45289383 agagagttggggtagcacctattcagtagaaaagatggtggaaaataggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaaga 45289284  T
Q  460 agcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||  || |||||||||||  |||||   |||| || ||||| ||||||| | |||  |||| ||| ||||||||||||| ||||    
T  45289283 agagtagatcagatggaggatagtt---agattacaagagatagaggaagatctatgaaaactataagagaaactattaggaaa 45289203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 544
Target Start/End: Complemental strand, 46367547 - 46367499
Alignment:
Q  496 agagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||| |||| ||||| ||||||||| |||||||||||||| ||||    
T  46367547 agagacagtggaagacctaaaaaaattataagagaaactattaaaaaaa 46367499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 54365143 - 54365087
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||| ||| |||| |||||||| ||||||||||| ||| ||||||||||||| ||||    
T  54365143 cagaccacgagaggcagaggaagacctagaaaaactataagagaaactattaggaaa 54365087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 303 - 543
Target Start/End: Complemental strand, 9556717 - 9556481
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| |||||||||||| ||||| | |||| | |||||||||||||||||||| ||| ||||| |||||||| |||| ||||||| | |||||||    
T  9556717 gttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagttggggtaacacttatagtagaaaa-atggtggaa 9556619  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagaca 502  Q
    | |||| |||| |||||| |||||| || |||| |||  ||| ||| ||||| ||| |   || |||||||||||  ||||   || |  ||||||| ||    
T  9556618 aataggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggatagt---caaactactagaggca 9556522  T
Q  503 gaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
     ||||| |||| |||||| ||| ||| ||||||||||||||    
T  9556521 aaggaagaccttgaaaaactataagataaactattaagaaa 9556481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 341 - 543
Target Start/End: Original strand, 38434922 - 38435122
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag-gtttagttggtttgggcatgcagtgagatgac 439  Q
    |||||||||||||||||||| ||||| ||| |||| |||||||| ||||||||| ||||||||||||  ||| | ||||||||||||| |  |||| |||    
T  38434922 ttagaaatgacaacattagagagagaattggggtagcacctatagtagaaaagatggtggaaactagactttgggtggtttgggcatgtaaagagaagac 38435021  T
Q  440 ccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaa 539  Q
      ||| ||  | ||| ||||||  || |||| ||||||  ||||   ||||||||||||| |||||| | ||||||||||| ||  ||||||||||||||    
T  38435022 ttgtagatgctttagtaaggagagtagatcatatggaggatagt---cagatcactagaggcagaggtagacctagaaaaactacaagagaaactattaa 38435118  T
Q  540 gaaa 543  Q
    ||||    
T  38435119 gaaa 38435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 37481928 - 37481729
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||||||||||| ||||||||| ||||   |||||| || |||||| ||| ||| ||||| |||| ||||||| ||||| || |||| |||     
T  37481928 ttagaaatgacaacattagagagagagttggggtagttcctatagtaaaaaagatggttgaacctaggcttaggtggtttgagcatgtagagagaagact 37481829  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
     ||  |||||||||  |||||  || ||||||||||| | ||||   |||||||| |||  ||| ||| ||| ||||||| ||| |||||||||||||||    
T  37481828 tgtgaattttgtagttaggagagtagatcagatggaggggagtt---agatcactggaggtagatgaagaccaagaaaaactattagagaaactattaag 37481732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 344 - 426
Target Start/End: Original strand, 11412695 - 11412777
Alignment:
Q  344 gaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||||||| | |||||||| |||| |||| | ||||||||||    
T  11412695 gaaatgacaacattagagagagagttggggtagcacctatagtagaaaatatggtggaaaataggcttaggttgtttgggcat 11412777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 543
Target Start/End: Complemental strand, 43752258 - 43752059
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||| |||| | |||||| ||||||||| |||| |||||||| ||||||||  ||| |||| |||| |||| || ||||| |||| || |||| ||||    
T  43752258 ttagaactgaccatattagagagagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacc 43752159  T
Q  441 cgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaag 540  Q
      || ||| ||||| | ||||  || |||||||||||  || |   ||||||||| ||| || ||||| ||||||||||| ||| ||||||||||||| |    
T  43752158 tatagattatgtagtagggagagtagatcagatggaggatact---cagatcactggaggcataggaagacctagaaaaactatcagagaaactattagg 43752062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 536
Target Start/End: Original strand, 18958903 - 18959074
Alignment:
Q  366 agttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgg----gcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    ||||| |||| |||||||| ||||||||| |||||||| |||| |||| ||||||||    |||||||| |||| |||| | |  |||||||| ||||||    
T  18958903 agttggggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttggttgggcatgcagagagaagacctgcagcttttgtagtaaggag 18959002  T
Q  462 cataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactat 536  Q
      || |||||||||||  ||||   |||||||  |||| |||||||| ||||||||||| ||  |||||||||||    
T  18959003 agtagatcagatggaggatagt---cagatcatcagaggcagaggaagacctagaaaaactacaagagaaactat 18959074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 13241056 - 13240970
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||||| ||||| |||  ||| ||  |||  ||||||||| ||||||||||||| |||| |||||||||||||    
T  13241056 ttagaaatgacaacattagagagagaattggagtagcaagtatgttagaaaagatggtggaaactaggcttaggtggtttgggcatg 13240970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 467 - 543
Target Start/End: Original strand, 33504320 - 33504393
Alignment:
Q  467 atcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||| |||||   ||||||||||||| ||||| || ||||||||||| ||| ||||||||||||||||||    
T  33504320 atcagatggagggtagt---cagatcactagaggcagagaaaaacctagaaaaactataagagaaactattaagaaa 33504393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 303 - 393
Target Start/End: Original strand, 36039156 - 36039246
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaag 393  Q
    ||||||||| |||||||| ||| ||||| ||| ||   ||| |||||||||||||||| | |||||||| ||||||| |||||||||||||    
T  36039156 gttgtgttggatgtgtggcaagtttagatgagttaaaattataaatgacaacattagagaaagagttgacgtaacacatataatagaaaag 36039246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 454
Target Start/End: Original strand, 11017306 - 11017398
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtag 454  Q
    |||||||||||||| |||||||| |||||||||  ||||||||| || |||  ||||||||| |||  | |||| |||||||| |||||||||    
T  11017306 agagagttgaggtagcacctatagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagacccgtagattttgtag 11017398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 543
Target Start/End: Complemental strand, 26784546 - 26784452
Alignment:
Q  446 attttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||| ||||||  || || |||||||| |||||   || |||||||||| ||||| || ||||||||||| ||| ||||||||||||||||||    
T  26784546 attttgtagtaaggagggtagataagatggagggtagt---caaatcactagaggcagagaaagacctagaaaaactataagagaaactattaagaaa 26784452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 440
Target Start/End: Complemental strand, 41763352 - 41763254
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | ||||||||||||| ||||||||  ||| |||| |||| |||| |||||||| ||||||| |||| ||||    
T  41763352 ttaggaatgacaccattagagagagagtgg-ggtaacacctatagtagaaaagttggtagaaaataggcttaggtggtttggacatgcagagagaagacc 41763254  T

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Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 19024151 - 19024237
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||||| |||| |||  |||| |||||||| | ||||||| |||||||| || | |||| |||||||| ||||    
T  19024151 ttagaaatgacaacattagagagagggtttgggtagcacctatatttgaaaagatggtggaaagtaagcttaggtggtttggacatg 19024237  T

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Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 8180713 - 8180850
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||| ||||||||  ||||   |||| | |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||    
T  8180713 gttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaa 8180812  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    | || | |||| ||||||||||||| || |||| ||||    
T  8180813 aataagcttagatggtttgggcatgtagagagaagacc 8180850  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 19235149 - 19235096
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||||| |||||    
T  19235149 atcactagagatagaggaagacctagaaaaactataagagaaactattgagaaa 19235096  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 413
Target Start/End: Original strand, 7615271 - 7615340
Alignment:
Q  342 tagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttag 413  Q
    |||||||||| ||||||||  |||| ||| ||||||||||||| ||||||||| |||| |||||||| ||||    
T  7615271 tagaaatgaccacattaga--gagacttggggtaacacctatagtagaaaagatggtgcaaactagggttag 7615340  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 24583908 - 24583840
Alignment:
Q  376 acacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||||||||||||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  24583908 acacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 24583840  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 40759070 - 40759157
Alignment:
Q  341 ttagaaatgacaacattagatagaga-gttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||||| ||||| |||| | || ||| |||| ||||||| | ||||||||||||  |||| ||||||| |||||    
T  40759070 ttagaaatgacaacattagagagagaggttgggttagcacttatagtagaaaaaatggtggaaactagagttaggtggtttgtgcatg 40759157  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 14197437 - 14197387
Alignment:
Q  378 acctataatagaaaagacggtggaaactagg-tttagttggtttgggcatg 427  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||||||||||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctttaggtggtttgggcatg 14197387  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 21834486 - 21834567
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctata 384  Q
    |||| |||| ||||||||||||  |||| |||||| | |||||||| ||||||||  | ||| |||||||||| ||||||||    
T  21834486 gttgagttggatgtgtggtaagactagatgagataagattagaaattacaacattgtaaagatagttgaggtagcacctata 21834567  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 23714607 - 23714506
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||||  ||||  | ||| | ||| ||||||| |||||||||||||  ||| |||| ||| |||| ||||||||| |||||||    
T  23714607 gttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag--ttg-ggtagcacatatagtagaaaagatggtggaa 23714511  T
Q  403 actag 407  Q
    |||||    
T  23714510 actag 23714506  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 407
Target Start/End: Complemental strand, 24102279 - 24102178
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||||  ||||  | ||| | ||| ||||||| |||||||||||||  ||| |||| ||| |||| ||||||||| |||||||    
T  24102279 gttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgacgacattagatagag--ttg-ggtagcacatatagtagaaaagatggtggaa 24102183  T
Q  403 actag 407  Q
    |||||    
T  24102182 actag 24102178  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 33287550 - 33287591
Alignment:
Q  502 agaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||    
T  33287550 agaggaagacctagaaaaactataagagaaactattaagaaa 33287591  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 12141539 - 12141599
Alignment:
Q  365 gagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggca 425  Q
    |||||| |||| |||||||| ||||||||| ||||||||  ||| |||| |||||||||||    
T  12141539 gagttggggtagcacctatagtagaaaagatggtggaaaagaggcttaggtggtttgggca 12141599  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 37452394 - 37452338
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||| ||||  ||||||| ||||||||||||||| |||| | |||||||||||    
T  37452394 cagatcacaagaggaagaggaagacctagaaaaattataagaggagctattaagaaa 37452338  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 542
Target Start/End: Complemental strand, 44438001 - 44437834
Alignment:
Q  372 ggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcag 471  Q
    |||||| |||||| ||||||||| ||| ||||||||   ||| |||||| |||||| || |||| |||  ||  ||| ||||  |||||| ||| || ||    
T  44438001 ggtaacccctatagtagaaaagatggtagaaactagacataggtggtttcggcatgtagagagaagacttgtggattctgtaataaggagtatagatgag 44437902  T
Q  472 atggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    |||||| | |||   |||||||||||||  || || | ||||||||||| |||  ||||||||||||||||    
T  44437901 atggaggggagt---cagatcactagaggtaggggtagacctagaaaaactatatgagaaactattaagaa 44437834  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 531
Target Start/End: Original strand, 45436956 - 45437000
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaa 531  Q
    ||||||||||||| |||||||| ||||| ||||||||| ||||||    
T  45436956 cagatcactagaggcagaggaagacctataaaaattataagagaa 45437000  T

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Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 303 - 542
Target Start/End: Original strand, 32043523 - 32043759
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    |||| |||| ||||||||||||  |||| | ||||   |||||||||||||||||||| ||||||||| |||| |||||||| || |||||| ||| |||    
T  32043523 gttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagttggggtatcacctatagtacaaaagatggtagaa 32043622  T
Q  403 actaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagaca 502  Q
    |||||  || | |||||||| |||| || |||| |||| ||  || |||||| |||||| ||| |||||||||||    | || || ||||||||||  |    
T  32043623 actagactttggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggag---gggtgtcaaatcactagaggta 32043719  T
Q  503 gaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    | |||| ||||| ||||| ||| ||||||||||| |||||    
T  32043720 ggggaagacctaaaaaaactattagagaaactatcaagaa 32043759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 341 - 539
Target Start/End: Original strand, 5908613 - 5908812
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggt------ggaaactaggtttagttggtttgggcatgcagtgag 434  Q
    |||||||||||||||||||| ||||||||| ||||  ||||||| ||||||||| |||      |||||||||  |||||||||||||  ||  || |||    
T  5908613 ttagaaatgacaacattagagagagagttggggtagaacctatagtagaaaagatggttgaaatggaaactagacttagttggtttggatat--agagag 5908710  T
Q  435 atgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaact 534  Q
    | |||| ||| ||||||||| ||||||  || ||||| |||||  | ||   |||||||||||||||| ||||| ||||||||||| ||| |||||||||    
T  5908711 aagacctgtagattttgtagtaaggagagtagatcaggtggaggatggt---cagatcactagagacataggaagacctagaaaaactataagagaaact 5908807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 403
Target Start/End: Complemental strand, 44681378 - 44681288
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaa 403  Q
    ||||||||||||  |||| |||||| | |||||||||||||||||||| ||| ||||| |||| |||||||||||||||||| ||||||||    
T  44681378 atgtgtggtaagactagacgagataagattagaaatgacaacattagagagacagttgtggtagcacctataatagaaaagatggtggaaa 44681288  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 543
Target Start/End: Complemental strand, 10080239 - 10080019
Alignment:
Q  318 tggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttgg 417  Q
    |||||||  |||| |||||| | |||||||||||||||||||| |||||||||||||| || ||| | ||||||||| |||||||||||||  | | |||    
T  10080239 tggtaagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcatcta-agtagaaaagatggtggaaactaggcct-gatgg 10080142  T
Q  418 tttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaa 517  Q
    |||||||||| || |||| |||| |   ||||||||| ||||||  || |||| ||| || | |||   || ||||||||||  ||||||| |||||||     
T  10080141 tttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggggagt---caaatcactagaggtagaggaagacctagag 10080045  T
Q  518 aaattatgagagaaactattaagaaa 543  Q
    ||| ||| ||| ||||| ||||||||    
T  10080044 aaactataagaaaaactgttaagaaa 10080019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 9695602 - 9695688
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||| | ||| | ||| |||| |||||||| ||||||||| |||||||||| || |||| |||||||||||||    
T  9695602 ttagaaatgacaacattatagagatatttggggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgggcatg 9695688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 426
Target Start/End: Complemental strand, 13171960 - 13171875
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    ||||||||||||| |||||| ||||||||| || | |||||||| ||||||||| |||||||| || | |||| ||||||||||||    
T  13171960 ttagaaatgacaagattagagagagagttggggaagcacctatagtagaaaagatggtggaaaatatgcttaggtggtttgggcat 13171875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 11733718 - 11733784
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||||||||||||||||||| | ||||||| | |||||||||| |||||| ||| ||||||||||||    
T  11733718 ttagaaatgacaacattagagaaagagttgggataacacctatgatagaatagatggtggaaactag 11733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 345 - 422
Target Start/End: Complemental strand, 42493611 - 42493536
Alignment:
Q  345 aaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgg 422  Q
    ||||||||||||| ||  |||||||| ||||||||||||| |||||||||  |||||||||||| |||| ||||||||    
T  42493611 aaatgacaacattgga--gagagttggggtaacacctatagtagaaaagattgtggaaactaggcttaggtggtttgg 42493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 494 - 543
Target Start/End: Original strand, 4011204 - 4011253
Alignment:
Q  494 ctagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  4011204 ctagagacagaggaagacctagaaaaactataagagaaactattaagaaa 4011253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 41444612 - 41444551
Alignment:
Q  366 agttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||| |||| |||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  41444612 agttggggtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatg 41444551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 2518730 - 2518623
Alignment:
Q  313 atgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggttta 412  Q
    ||||||||||||  |||| |||||| | ||||||||||||| |||||| ||| | ||| |||| |||||  | ||||||||| |||||||| ||||||||    
T  2518730 atgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcacctcaagtagaaaagatggtggaaaataggttta 2518632  T
Q  413 gttggtttg 421  Q
    | |||||||    
T  2518631 ggtggtttg 2518623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 374
Target Start/End: Original strand, 16252868 - 16252937
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggt 374  Q
    ||||||||| |||||||||||| ||||| ||||||   |||||||||||||||||||  |||||||||||||    
T  16252868 gttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacattag--agagagttgaggt 16252937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 426
Target Start/End: Complemental strand, 30113503 - 30113423
Alignment:
Q  346 aatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    |||||||  |||||| ||||||| | |||||||| |||| ||||||||| ||| |||| |||||||| |||||||||||||    
T  30113503 aatgacattattagagagagagtcggggtaacacatatagtagaaaagatggtagaaaataggtttaattggtttgggcat 30113423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 444
Target Start/End: Original strand, 36545080 - 36545223
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagag--ttgaggtaacacctataatagaaaagacggtgg 400  Q
    ||||||||| ||| ||||||||  ||||   |||| | |||| ||||||| ||||||| ||||||  | | ||||||||||||| ||||||||  ||| |    
T  36545080 gttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagagtgggggtaacacctatagtagaaaagttggtag 36545179  T
Q  401 aaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    ||| |||| |||| ||||||||||||| || |||| ||||||||    
T  36545180 aaaataggcttagatggtttgggcatgtagagagaagacccgta 36545223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 444
Target Start/End: Complemental strand, 36565552 - 36565449
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || ||||  |||    
T  36565552 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacc 36565453  T
Q  441 cgta 444  Q
    ||||    
T  36565452 cgta 36565449  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 543
Target Start/End: Complemental strand, 35914838 - 35914713
Alignment:
Q  415 tggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacaccta 514  Q
    ||||||||||| | || |||| ||||  || ||||| ||||||||||  ||  ||||||||||  ||||   |||||| ||||||||||||||| || ||    
T  35914838 tggtttgggcacgtagagagaagacctatagattttatagcaaggagagtaggtcagatggaggatagt---cagatccctagagacagaggaagacata 35914742  T
Q  515 gaaaaattatgagagaaactattaagaaa 543  Q
    |||||| ||| ||||||||||||| ||||    
T  35914741 gaaaaactataagagaaactattaggaaa 35914713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 39051113 - 39051195
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttggg 423  Q
    ||||||||||||| ||| || ||||||||| | |||||||||| || ||||||| ||  |||||| ||||||| |||||||||    
T  39051113 ttagaaatgacaatattcgagagagagttgggataacacctatcattgaaaagatggcagaaactcggtttaggtggtttggg 39051195  T

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Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 487 - 544
Target Start/End: Original strand, 16705861 - 16705918
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||||||||||| ||||| ||||| ||| ||| | |||||||||||||||||||    
T  16705861 cagatcactagagacaaaggaagacctaaaaatattgtaagagaaactattaagaaaa 16705918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 303 - 384
Target Start/End: Complemental strand, 28300461 - 28300380
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctata 384  Q
    ||||||||| |||||| |||||  |||| |||||| | |||||||||||||||||  | ||| |||||| ||||||||||||    
T  28300461 gttgtgttggatgtgtagtaagactagatgagataagattagaaatgacaacattgtagagatagttgacgtaacacctata 28300380  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 341 - 401
Target Start/End: Original strand, 35601992 - 35602050
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtgga 401  Q
    ||||||||||||| |||||| |||||  ||||||||||||||||||| |||||| ||||||    
T  35601992 ttagaaatgacaatattagagagaga--tgaggtaacacctataataaaaaagatggtgga 35602050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 45512660 - 45512607
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| |||||||| ||||||||||| ||| ||||||||||||| ||||    
T  45512660 atcactagaggcagaggaagacctagaaaaactataagagaaactattaggaaa 45512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 543
Target Start/End: Complemental strand, 5127442 - 5127382
Alignment:
Q  483 ttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||| |||||||||||| |||||| |  |||||||||| ||| ||||||||||||||||||    
T  5127442 ttgctagatcactagaggcagaggtaggcctagaaaaactataagagaaactattaagaaa 5127382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 35643774 - 35643718
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||| ||||||| |||||||| ||||||||||| ||| ||||||| ||||||||||    
T  35643774 cagattactagaggcagaggaagacctagaaaaactataagagaaattattaagaaa 35643718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 36069576 - 36069676
Alignment:
Q  303 gttgtgttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaa 402  Q
    ||||||||| ||||||||||||  |||| | |||| | ||||||| |||||||||||  |||||||||| |||  |||||||||| || ||| |||||||    
T  36069576 gttgtgttggatgtgtggtaagactagacgggataagattagaaacgacaacattag--agagagttga-gtagaacctataataaaatagatggtggaa 36069672  T
Q  403 acta 406  Q
    ||||    
T  36069673 acta 36069676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 2216402 - 2216457
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    |||||||||||||  ||||||| |||||||||||  || |||||||||||||||||    
T  2216402 cagatcactagaggtagaggaagacctagaaaaaacataagagaaactattaagaa 2216457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 407
Target Start/End: Original strand, 25985492 - 25985556
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    ||||||| |||||||||||  ||||||||| |||| |||||||| ||||||||| ||| ||||||||    
T  25985492 ttagaaacgacaacattag--agagagttggggtagcacctatagtagaaaagatggtagaaactag 25985556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 2796528 - 2796614
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||| ||||||| ||||||| ||||||| | |||| | |||||| ||||||||  ||| |||| |||| |||| |||||||||||||    
T  2796528 ttaggaatgacaccattagagagagagtgggggtagcgcctatagtagaaaagttggtagaaaataggcttagatggtttgggcatg 2796614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 7046305 - 7046391
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||||||||||||||| ||||||    |||| |||| ||  ||||||||| ||||||| || || |||| |||||||||||||    
T  7046305 ttagaaatgacaacattagagagagaggctgggtagcaccaatcgtagaaaagatggtggaacctcggcttagctggtttgggcatg 7046391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 18474235 - 18474185
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    |||||||| |||||| || ||||||||||||| |||||||||||| |||||    
T  18474235 cacctatagtagaaatgatggtggaaactaggcttagttggtttgagcatg 18474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 542
Target Start/End: Complemental strand, 24399951 - 24399902
Alignment:
Q  493 actagagacagaggaacacctagaaaaattatgagagaaactattaagaa 542  Q
    ||||||| ||||| || || |||||||||||| |||||||||||||||||    
T  24399951 actagaggcagagcaaaacttagaaaaattataagagaaactattaagaa 24399902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 426
Target Start/End: Original strand, 29700267 - 29700332
Alignment:
Q  361 tagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    |||||||||| |||| |||||||| ||||||||| || ||||| | || |||| ||||||||||||    
T  29700267 tagagagttggggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgggcat 29700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 30748397 - 30748527
Alignment:
Q  308 gttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||| ||||||||| || |||||   |||| | |||||||||||||||||| |  |||||||| |||  ||||  || ||||||||| ||||||| | ||    
T  30748397 gttggatgtgtggttagattagacatgataggattagaaatgacaacattaca--gagagttgtggtcgcaccagtagtagaaaagatggtggaatcaag 30748494  T
Q  408 gtttagttggtttgggcatgcagtgagatgacc 440  Q
    | |||| ||||||||||||| || |||| ||||    
T  30748495 gcttaggtggtttgggcatgtagagagaagacc 30748527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 543
Target Start/End: Original strand, 32931078 - 32931131
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| |||||||| ||||| ||||| ||| ||||||||||||| ||||    
T  32931078 atcactagaggcagaggaagacctaaaaaaactatcagagaaactattaggaaa 32931131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 40813316 - 40813381
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatg 427  Q
    ||||||| | |||| |||||||| ||||||||  ||| |||| ||||||||| |||||||||||||    
T  40813316 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatg 40813381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 12491418 - 12491346
Alignment:
Q  372 ggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgta 444  Q
    |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||||||    
T  12491418 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgta 12491346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 18125146 - 18125247
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||||| ||||||  ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| |||||||  |||| || |||| ||||    
T  18125146 ttagaaatgacaccattag--agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacc 18125243  T
Q  441 cgta 444  Q
    ||||    
T  18125244 cgta 18125247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 437 - 539
Target Start/End: Complemental strand, 38178475 - 38178376
Alignment:
Q  437 gacccgtacattttgtagcaaggagcataaatcagatggagcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactat 536  Q
    |||| ||| ||||||||| ||||||  || |||||||||||  ||||   || ||| ||||||  ||||||| ||||||||||| ||| |||||||||||    
T  38178475 gacctgtagattttgtagtaaggagagtagatcagatggaggatagt---caaatcgctagaggtagaggaagacctagaaaaactataagagaaactat 38178379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 543
Target Start/End: Complemental strand, 38392057 - 38392005
Alignment:
Q  491 tcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||| ||||||||||| ||||||||||| |||  ||||||| |||||||||    
T  38392057 tcactatagacagaggaagacctagaaaaactatatgagaaaccattaagaaa 38392005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 544
Target Start/End: Complemental strand, 41444506 - 41444451
Alignment:
Q  491 tcactagagacagaggaacacctaga--aaaattatgagagaaactattaagaaaa 544  Q
    ||||||||| |||||||| |||||||  |||| ||| |||||||||||||||||||    
T  41444506 tcactagaggcagaggaagacctagaaaaaaactataagagaaactattaagaaaa 41444451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 444
Target Start/End: Original strand, 31439 - 31542
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||| ||||||| ||||||| ||||||| | |||| |||||||| ||||||||  ||| |||| |||| |||| ||||||||||||| || |||| ||||    
T  31439 ttaggaatgacaccattagagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacc 31538  T
Q  441 cgta 444  Q
    ||||    
T  31539 cgta 31542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 44159 - 44080
Alignment:
Q  361 tagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacc 440  Q
    |||||||||| |||| |||||||| ||||||||| || ||||| |||| |||| ||||||||||||| || |||| ||||    
T  44159 tagagagttggggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgggcatgtagagagaagacc 44080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 543
Target Start/End: Complemental strand, 178585 - 178532
Alignment:
Q  490 atcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| | ||| || ||||||||||| ||| ||||||||||||||||||    
T  178585 atcactagaggcggagtaagacctagaaaaactataagagaaactattaagaaa 178532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 440
Target Start/End: Original strand, 33083996 - 33084128
Alignment:
Q  308 gttgaatgtgtggtaagcttagaagagatacggttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactag 407  Q
    |||| ||||||||||||  |||| | ||||   ||||||||||| | |||||| ||||||||| |||| |||||||  ||||||||| ||| ||||||||    
T  33083996 gttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagttggggtagcacctatggtagaaaagatggtagaaactag 33084095  T
Q  408 gtttagttggtttgggcatgcagtgagatgacc 440  Q
      |||| ||||||||| ||| || |||| ||||    
T  33084096 acttaggtggtttgggaatgtagagagaagacc 33084128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 543
Target Start/End: Complemental strand, 34672 - 34617
Alignment:
Q  488 agatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||||| |||||||| ||||||||||| ||| |||||||| |||||||||    
T  34672 agatcactagaggcagaggaagacctagaaaaactataagagaaaccattaagaaa 34617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 408
Target Start/End: Complemental strand, 12134212 - 12134145
Alignment:
Q  341 ttagaaatgacaacattagatagagagttgaggtaacacctataatagaaaagacggtggaaactagg 408  Q
    ||||||||||||| |||||| ||||| ||||||||  ||||||| ||||||||| |||||||| ||||    
T  12134212 ttagaaatgacaatattagagagagaattgaggtacgacctatagtagaaaagatggtggaaaatagg 12134145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 500
Target Start/End: Complemental strand, 14389457 - 14389323
Alignment:
Q  362 agagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggag 461  Q
    |||||||||||||| |||||||  ||||||||| ||||||||| |   |||| |||||||| |||| || |||| ||||  || | ||||||| ||||||    
T  14389457 agagagttgaggtagcacctatcgtagaaaagatggtggaaac-aaacttaggtggtttggacatgtagagagaagacctatagactttgtagtaaggag 14389359  T
Q  462 cataaatcagatggagcgtagttgccagatcactagaga 500  Q
     ||| |||||||||||  ||||   ||||||||||||||    
T  14389358 aatagatcagatggaggatagt---cagatcactagaga 14389323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 9593861 - 9593820
Alignment:
Q  502 agaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||    
T  9593861 agaggaagacctagaaaaattataagagaaactattaggaaa 9593820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 21870364 - 21870299
Alignment:
Q  361 tagagagttgaggtaacacctataatagaaaagacggtggaaactaggtttagttggtttgggcat 426  Q
    |||||||||| |||| ||||| || ||||||||| ||| |||||| || |||| ||||||||||||    
T  21870364 tagagagttggggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgggcat 21870299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 474
Target Start/End: Complemental strand, 6293660 - 6293564
Alignment:
Q  378 acctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacattttgtagcaaggagcataaatcagatg 474  Q
    ||||||| || |||| | ||||||||||||||| || ||||||||||||| || ||||  ||| ||| ||| ||||  ||||||  |||||||||||    
T  6293660 acctatagtacaaaatatggtggaaactaggttcaggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatg 6293564  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 7513666 - 7513614
Alignment:
Q  377 cacctataatagaaaagacggtggaaactaggtttagttggtttgggcatgca 429  Q
    |||||||||||||||||| ||| ||| ||||  |||| |||||||||||||||    
T  7513666 cacctataatagaaaagatggtagaacctagacttaggtggtttgggcatgca 7513614  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Original strand, 8364670 - 8364726
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||||||  ||| ||| ||||| ||||| ||| ||||||||||||||||||    
T  8364670 cagatcactagaggaagatgaagacctaaaaaaactataagagaaactattaagaaa 8364726  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 543
Target Start/End: Original strand, 24665818 - 24665981
Alignment:
Q  378 acctataatagaaaagacggtggaaactaggtttagttggtttgggcatgcagtgagatgacccgtacatttt-gtagcaaggagcataaatcagatgga 476  Q
    ||||||| ||||||| | ||| |||| |||| |||| |||||||| |||| || |||| |||| ||| ||||| |||| ||||||  || |||||||| |    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatcagatgaa 24665917  T
Q  477 gcgtagttgccagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    || |||| |   |||||| |||| ||||||||  | ||||| || ||  ||||||||||||||||||    
T  24665918 gcatagtcg---gatcaccagaggcagaggaagtcatagaataactacaagagaaactattaagaaa 24665981  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 544
Target Start/End: Complemental strand, 33997707 - 33997655
Alignment:
Q  492 cactagagacagaggaacacctagaaaaattatgagagaaactattaagaaaa 544  Q
    |||||||| |||||||| |||| | |||| ||| |||||||||||||||||||    
T  33997707 cactagaggcagaggaagaccttggaaaactataagagaaactattaagaaaa 33997655  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 45611 - 45556
Alignment:
Q  487 cagatcactagagacagaggaacacctagaaaaattatgagagaaactattaagaaa 543  Q
    |||||||||| ||||| | |||||||||| |||| ||| ||||||||||||||||||    
T  45611 cagatcactaaagacataagaacacctag-aaaactatcagagaaactattaagaaa 45556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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