View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3962_low_7 (Length: 482)
Name: NF3962_low_7
Description: NF3962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3962_low_7 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22805740 - 22805419
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||||| || | | || ||| ||||||||| |||| |
|
|
| T |
22805740 |
catcacatttatatcttgatggttttgctgagttaacctcagatggcatactaagactcaccaatgatacagaacaagtaataggtcatgctttctatcc |
22805641 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
22805640 |
aaatccaatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccaccttttactggc |
22805541 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
22805540 |
catggaattgtttttgttctttctccaacaaaagggctaccaaattcactaccaaatcaataccttggtctctttaatgattccaacaatggaaacagtg |
22805441 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22805440 |
gcaaccatgtttttggtgttga |
22805419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22815458 - 22815137
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||| |||||||| |||| |
|
|
| T |
22815458 |
catcacatttaaatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaaagagccaaaggatatgctttctatcc |
22815359 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||| |||| |
|
|
| T |
22815358 |
aaatcctatagttttcaaaaacacttccaatgaaagtgtgtcttctttctcaactacttttgtgtttgcaataagacctcaatatccaccttttagtggc |
22815259 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22815258 |
caaggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaacgattccaacaatggaaacagta |
22815159 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
22815158 |
acaaccatgtttttggtgttga |
22815137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22889723 - 22889402
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||| || |||||||||| |||| |||| |
|
|
| T |
22889723 |
catcacatttatatcttgatggtattgctgagttaactacaaatggcttactaaaactcaccaatgatacagaaagagacaaaggacatggtttctatcc |
22889624 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| |
|
|
| T |
22889623 |
aaatccaatagttttcaaaaacacttccagtgaaagcgtgtcttctttctcaactacttttttatttgccataatacctcaatatgcaaatattggtggc |
22889524 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
22889523 |
catggaattgtttttgttatttctccaacaaaagggctaccagattcactaccaagtcaataccttggtctctttaacgattccaacagtggaaacagta |
22889424 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22889423 |
gcaaccatgtttttggtgttga |
22889402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22876347 - 22876026
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||| |||| |||| |
|
|
| T |
22876347 |
catcaaatttatatcttgatggtattgctgagttaacctcaaatggcttactaaaactcaccaatgatacagaatatgaaaaaggacatggtttctatcc |
22876248 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||| |
|
|
| T |
22876247 |
aaatcctatagttttcaaaaacacttccaatggaagtgtgtcttctttctcaactacttttgtatttgccataagacctcaatatccaactattagtggt |
22876148 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||| | ||||||||| |||||||||||||||| ||||| |||| |||||||||||||||| |
|
|
| T |
22876147 |
gatggaattgtttttgttgtttctcctacaaaagggctaccaaactcactaccacgtcaataccttggtctctttaacaattcaaacaatggaaacagta |
22876048 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22876047 |
gcaaccatgtttttggtgttga |
22876026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22898694 - 22898373
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||||| ||||||||||| | |||||||||| |||| | | ||||||| |||||||||| |||| |
|
|
| T |
22898694 |
catcacatttatatcttgatggtattgctaatttaacctccaatggcttacttagactcaccaatgataccaagcaagaaaaagcacatgctttctatcc |
22898595 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
|||||||||||||||||| |||||||| | || |||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| | ||| |||| |
|
|
| T |
22898594 |
aaatcctatagttttcaagaacacttctaatggaagtgtttcttctttctcaactacttttgtgtttgccataagacctcaatatccaactcttagtggc |
22898495 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||| | ||||| ||||||||||||||| ||||||||| || |||||||||||||||| ||||| | |||||||||||||| |||| |
|
|
| T |
22898494 |
catggaattgtttttgttgtctctcctacaaaagggctaccaaattcactacaaagtcaataccttggtctctttaacaaatccaacaatggaaatagta |
22898395 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22898394 |
gcaaccatgtttttggtgttga |
22898373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22810075 - 22809754
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||||| ||||| || | |||||||||||||||||| |||| |
|
|
| T |
22810075 |
catcacatttatatcttgatggtattgctgagttaaccccagatggcttactaagactcaccaatgatacagaacatgaaaaaggacatgctttctatcc |
22809976 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| | ||| | | |
|
|
| T |
22809975 |
aaatcctgtagttttcaaaaacactatcagtgaaagtgtatcttctttctcaactacttttgtatttgccataagacctcaatatccaactcttagttcc |
22809876 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
||||||||||| |||||| |||| || ||||||||||| ||| ||||| | ||| |||||| ||||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
22809875 |
catggaattgtatttgttgtttcacctacaaaagggctgccaaattcaaaagcaagtcaatatcttggtctctttaaccaatccaacaatggaaacagta |
22809776 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
| ||||||||||| |||||||| |
|
|
| T |
22809775 |
gtaaccatgttttcggtgttga |
22809754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22840483 - 22840162
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||| ||||| || | ||||||||||| |||||| |||| |
|
|
| T |
22840483 |
catcaaatttatatcttgatggtaccgctgagttagcctcaactggcttactaagactcaccaatgatacaaaacaagaaaaaggacaagctttctatcc |
22840384 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||||| | || ||||||| | ||| |||| |
|
|
| T |
22840383 |
aaatcctatagttttcaaaaacacttccagcggaagtgtttcttctttctcaactacttttgtattttccataaaatcttcatatccaactcttagtggc |
22840284 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||| |||||||||||||||| ||||| | ||||||| ||||||| || |
|
|
| T |
22840283 |
catggaattgttttcgttatttctcctacaaaagggctaccaaattcactaccaagtcaataccttggtctctttaaccaatccaacattggaaacggtg |
22840184 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22840183 |
gcaaccatgtttttggtgttga |
22840162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22831462 - 22831141
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||| |||| || | || | |||||||| |||| |
|
|
| T |
22831462 |
catcacatttatatcttgatggtattgctgagttaacttcagatggcttactaagactcaccaatgataccgggccagatacagcatatgctttctatcc |
22831363 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||||| ||||||||| ||||||||||| | || ||||||||| |||||||||||||||||||||||| |||||| | | |||||| | ||| |||| |
|
|
| T |
22831362 |
aaatcatatagtttttaaaaacacttcgaatgcaagtgtgtcatctttctcaactacttttgtatttaccataaaatccatgtatccatctattagtggc |
22831263 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||| | ||||||| ||||||||||| |
|
|
| T |
22831262 |
catggaattgtttttgttctttctcctacaaaagggctaccaaattcactaccaaatcaatactttggtctctttaactactccaacattggaaacagta |
22831163 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
22831162 |
gcaaccatgtttttggtgttga |
22831141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22880995 - 22880674
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||| ||||||||||||||||| |||||||||| | ||| ||| | |||||| |||||||| |||| |
|
|
| T |
22880995 |
catcacatttatatcttgatggtattgctaaggtaaactcaaatggcttactaagactcaccaatgacacagaaagagccaaaggatatgctttctatcc |
22880896 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | | || ||| || | | |||| |
|
|
| T |
22880895 |
aaatcctatagttttcaaaaacacttccaatgaaagtgtgtattctttctcaactacttttgtatttgccatcaaatctaggtatacagctacttgtggc |
22880796 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||| ||||||||||| |||| |||||||||||||||||| |||| ||||||| | |||||||||||||| || || || ||||| |||||||| || |
|
|
| T |
22880795 |
catggacttgtttttgttgtttcaccaacaaaagggctaccaaattcgctaccaagtaaataccttggtctctttgacactttcaacactggaaacatta |
22880696 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
||||||||||||||| |||||| |
|
|
| T |
22880695 |
gcaaccatgtttttgctgttga |
22880674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 22894375 - 22894054
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
|||| ||||| |||||||||||| ||||| | |||||||| ||||||||||||| |||||||||| | || || | ||||||| |||||||||| |||| |
|
|
| T |
22894375 |
catctcatttgtatcttgatggtattgctaatttaacctccaatggcttactaagactcaccaatgacaccaaacaagaaaaagcacatgctttctatcc |
22894276 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||| ||||||||||| || |||||||||| || |||||| ||||| |||||||||||||||||||||||||||| || |||| |||| || || |||| |
|
|
| T |
22894275 |
aaaccctatagttttgaagaacacttccaatggaagtgtttcttcattctcaactacttttgtatttgccataagacatcaaggtccaacttatagtggc |
22894176 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||| ||||||| | | | ||||||||||||| || ||||||||||||||||||| || |
|
|
| T |
22894175 |
catggaattgtttttgttctttctcctacaaaagggctaccaaattcactccaaggttcataccttggtctctttgacgattccaacaatggaaatccta |
22894076 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
22894075 |
gcaaccacgtttttggtgttga |
22894054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 322 - 469
Target Start/End: Complemental strand, 22805359 - 22805212
Alignment:
| Q |
322 |
atatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaatccaataca |
421 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
22805359 |
atatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaacagtagacctttccagtggaaatcctataca |
22805260 |
T |
|
| Q |
422 |
ggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805259 |
ggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
22805212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 6 - 320
Target Start/End: Complemental strand, 22842590 - 22842264
Alignment:
| Q |
6 |
catttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatccaaatc |
105 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||| |||||||| || |||||||||| ||||| || | | ||||| |||||||| ||||||| | |
|
|
| T |
22842590 |
catttgtatcttgatggtattgctgagttaacctcaggtggcttaccaagactcaccaatgatacaaaacaatacaaaggtcatgctttatatccaaaac |
22842491 |
T |
|
| Q |
106 |
ctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatcc---act---ttttactgg |
199 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||| | |||| ||| | ||| ||| |
|
|
| T |
22842490 |
caatagttttcaaaaacacttctagtgaaagtgtgtcttctttctcaactacttttttatttgccataaaatctccagatccagaactaactcttagtgg |
22842391 |
T |
|
| Q |
200 |
ccatggaattgttt--ttgtt----ctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatgga |
293 |
Q |
| |
|
||| || ||||||| ||||| ||||| || |||||||||| |||| ||||||||||| |||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
22842390 |
ccacgggattgttttgttgtttcaactttcacctacaaaagggcaaccaaattcactaccaggtcaataccttggtctctttaacaattccaacaatgga |
22842291 |
T |
|
| Q |
294 |
aacagtagcaaccatgtttttggtgtt |
320 |
Q |
| |
|
|| |||||||||||||||||||||||| |
|
|
| T |
22842290 |
aatagtagcaaccatgtttttggtgtt |
22842264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 88 - 322
Target Start/End: Complemental strand, 22885934 - 22885704
Alignment:
| Q |
88 |
atgctttccatccaaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatcc |
187 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||| |||| | || ||||||| |
|
|
| T |
22885934 |
atgctttctatccaaatcctatagttttcaaaaacact--cagtgaaagtgtgtcttctttctcaactaattctttatttgctataaaatcttaatatcc |
22885837 |
T |
|
| Q |
188 |
actttttactggccatggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaac |
287 |
Q |
| |
|
| | || |||||||||||||||||||||| |||| || ||||||||||||||| ||||||||| | || |||||||||||||| |||| |||||||| |
|
|
| T |
22885836 |
aactcatagtggccatggaattgtttttgttatttcacctacaaaagggctaccaaattcactacaatattaataccttggtctc--taacaattccaac |
22885739 |
T |
|
| Q |
288 |
aatggaaacagtagcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| |
|
|
| T |
22885738 |
aatggaaacagtagcagccatgtttttggtattga |
22885704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22858850 - 22858677
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||| | || | || |||||||||| |||| |
|
|
| T |
22858850 |
catcacatttatatcttgatggtattgctgagttaacttcaactggcttactaagactcaccaatgatatcgggcaagatacagcacatgctttctatcc |
22858751 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataa |
174 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22858750 |
aaatcctatagttttcaaaaacacttctagtgaaactgtgtcttctttctcaactacttttttatttgccataa |
22858677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 22914099 - 22913783
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||| ||||||| | | |||||| || || | | |||| || ||||||||| |||| |
|
|
| T |
22914099 |
catcacatttatatcttgatggtgttgctgaattaacctcaaatggtttactaagattaaccaatgattcaagacaacaaaagggtcatgctttctatcc |
22914000 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
||| |||||||||||||| || ||| | ||| ||||||||||| ||||||||||| |||||||||| | || | | ||| | ||| |||| |
|
|
| T |
22913999 |
aaaccctatagttttcaacaatggaagtagtagtaatgtatcttctttctctactacttttgtttttgccataaaatctgagtttcctaatcttagtggc |
22913900 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| | || || || ||||||||||||| | |
|
|
| T |
22913899 |
catggaattgtttttgttctttctccaacaaaagggttaccaaattcactaccaagtcaataccttggtctattcaatgaatcaaacaatggaaacaaca |
22913800 |
T |
|
| Q |
301 |
gcaaccatgtttttggt |
317 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
22913799 |
ataaccatgtttttggt |
22913783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 469
Target Start/End: Complemental strand, 22889345 - 22889195
Alignment:
| Q |
319 |
ttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaatccaat |
418 |
Q |
| |
|
|||||||||||||| ||||||||| || |||||| |||||| ||||| |||| | |||||||| ||| | || ||||||||||||| | || || |
|
|
| T |
22889345 |
ttgatatcaatgatttgaaatcagctgattcaactcctgcaggatattatgatggttatggtcaattcaaggatttatccctttccagtggataccctat |
22889246 |
T |
|
| Q |
419 |
acaggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889245 |
gcaggtatggattgaatatgatggagtgaagaaaaagattgatgttacttt |
22889195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 22858665 - 22858572
Alignment:
| Q |
229 |
caaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagtagcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||| ||||||| ||||| ||||||||||||| | ||||||||||||||| |||||||| |||||||||||| |||| |||||| |
|
|
| T |
22858665 |
caaaagggctaccagattcacttccaaaccaataccttggtccctttaacgattccaacattggaaacactagcaaccatgtgtttgctgttga |
22858572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 319 - 466
Target Start/End: Complemental strand, 22831084 - 22830937
Alignment:
| Q |
319 |
ttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaatccaat |
418 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||| |||||| ||||| |||||| ||||| | |||| | | || |||| |||||||| |||| || |
|
|
| T |
22831084 |
ttgatatcaatgatttgaaatcagctaattcaactcctgcaggatattatgatgatactggtcgattcaggaatttatcccttaccagtggacatcctat |
22830985 |
T |
|
| Q |
419 |
acaggtatggattgattatgatggagtgaagaaaaagattgatgttac |
466 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
22830984 |
gcaggtatggattgaatatgatggagtgaagaaaaagattgatgttac |
22830937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 469
Target Start/End: Complemental strand, 22815078 - 22814930
Alignment:
| Q |
321 |
gatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaatccaatac |
420 |
Q |
| |
|
||||||||| || ||||||||| | |||||| |||||| ||||| |||||||||||||| |||| || |||||||| |||| ||| |||| |
|
|
| T |
22815078 |
gatatcaattatttgaaatcagctaattcaactcctgcaggatattataatgatcatggtcaattcagggagttatccctttccaatggatttcctatac |
22814979 |
T |
|
| Q |
421 |
aggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22814978 |
aggtatggattgactatgatggagtgaagaaaaagattgatgttacttt |
22814930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 22880565 - 22880497
Alignment:
| Q |
398 |
cctttccagtggaaatccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttac |
466 |
Q |
| |
|
||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
22880565 |
cctttccagtggatatcccatgcaggtatggattgactatgatggagtgaagaaaaagattgaggttac |
22880497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 22875890 - 22875819
Alignment:
| Q |
398 |
cctttccagtggaaatccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
||||| ||||||| |||| || |||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
22875890 |
ccttttcagtggatatcccatgcaggtatggattgactatgatggagtgaaaaaaaagattgatgttacttt |
22875819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 469
Target Start/End: Complemental strand, 22898322 - 22898166
Alignment:
| Q |
313 |
ttggtgttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaa |
412 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | |||||| |||||| ||||| |||| | |||||||| ||| | | | ||||| |||||| || |
|
|
| T |
22898322 |
ttggtattgatatcaatgatttgaaatcagctaaatcaactcctgcaggatattatgatgttaatggtcaactcaagaatttgacccttttcagtggcaa |
22898223 |
T |
|
| Q |
413 |
tccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
||| || |||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
22898222 |
tcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttacttt |
22898166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 466
Target Start/End: Complemental strand, 22840111 - 22839958
Alignment:
| Q |
313 |
ttggtgttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaa |
412 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | |||||| |||||| ||||||||||| || || | |||| | || ||| ||||||||| | |
|
|
| T |
22840111 |
ttggtattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattacgatgaatataatcgattcagggatttatccctctccagtggata |
22840012 |
T |
|
| Q |
413 |
tccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttac |
466 |
Q |
| |
|
||| || || ||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
22840011 |
tcctatgcaagtatggattgaatatgatagagtgaagaaaaagattgatgttac |
22839958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 22858436 - 22858368
Alignment:
| Q |
398 |
cctttccagtggaaatccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttac |
466 |
Q |
| |
|
|||||| |||||| |||| || ||||||||||| || |||||||||||||||||||| ||||||||||| |
|
|
| T |
22858436 |
cctttctagtggatatcctatgcaggtatggatagaatatgatggagtgaagaaaaatattgatgttac |
22858368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 469
Target Start/End: Complemental strand, 22894003 - 22893847
Alignment:
| Q |
313 |
ttggtgttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaa |
412 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | |||||| |||||| ||||| |||| | |||||||| ||| | | || |||| |||||| | |
|
|
| T |
22894003 |
ttggtattgatatcaatgatttgaaatcagctaattcaactcctgcaggatattatgatggtaatggtcaattcaagaatataagccttatcagtggcta |
22893904 |
T |
|
| Q |
413 |
tccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
||| || |||||||||||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
22893903 |
tcctatgcaggtatggattgaatatgatggtgaaaagaaaaagattgatgttacttt |
22893847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 469
Target Start/End: Complemental strand, 22913602 - 22913568
Alignment:
| Q |
435 |
tatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
22913602 |
tatgatggagtgaagaaaaagattgatgttacttt |
22913568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 322
Target Start/End: Original strand, 21150283 - 21150604
Alignment:
| Q |
1 |
catcacatttatatcttgatggttttgctgagttaacctcaaatggcttactaaaactcaccaattatacacaaaacgaaaaaggacatgctttccatcc |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| | | ||||| | | |||| ||| ||||||||| |||| |
|
|
| T |
21150283 |
catcacatttatatcttgatggtattgctgagttaacctcaaatggcttactaagactcactagtgatacagatcatgaaatagggcatgctttctatcc |
21150382 |
T |
|
| Q |
101 |
aaatcctatagttttcaaaaacacttccagtgaaagtgtgtcttctttctcaactacttttgtatttgccataatacctcaatatccactttttactggc |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||| | |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| | || |||| |
|
|
| T |
21150383 |
aaatcctatagttttcgaaaacacttccggcgaaagtgtgttttctttttcaactacttttgtatttgccataagacctcaatatccaactcttggtggc |
21150482 |
T |
|
| Q |
201 |
catggaattgtttttgttctttctccaacaaaagggctaccacattcactaccaaatcaataccttggtctcattaacgattccaacaatggaaacagta |
300 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
21150483 |
catggaattgtttttgttatttctcctacaaaagagctaccaaattcactaccaacacaataccttggtctctttaacaattccaacaatggaaacagta |
21150582 |
T |
|
| Q |
301 |
gcaaccatgtttttggtgttga |
322 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
21150583 |
gcaaccatgtttttggtgttga |
21150604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 469
Target Start/End: Original strand, 21150655 - 21150811
Alignment:
| Q |
313 |
ttggtgttgatatcaatgatctgaaatcagttgtctcaactactgcagcctattacgatgatcatggtcaaatcagaactgtagacctttccagtggaaa |
412 |
Q |
| |
|
||||| |||||||||||||| ||||||||| | ||||||| |||||| |||||| |||||| ||| | | ||| | || ||||| ||||||| | |
|
|
| T |
21150655 |
ttggtattgatatcaatgatttgaaatcagctaactcaacttctgcaggctattatgatgataatgatggattcaatgatttatcccttttcagtggata |
21150754 |
T |
|
| Q |
413 |
tccaatacaggtatggattgattatgatggagtgaagaaaaagattgatgttacttt |
469 |
Q |
| |
|
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| T |
21150755 |
tcctatgcatgtatggattgaatatgatggtgaaaagaagaagattaatgttacttt |
21150811 |
T |
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