View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3963_high_17 (Length: 424)

Name: NF3963_high_17
Description: NF3963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3963_high_17
NF3963_high_17
[»] chr4 (18 HSPs)
chr4 (9-136)||(56436371-56436498)
chr4 (330-391)||(29240010-29240071)
chr4 (337-386)||(31910323-31910372)
chr4 (353-386)||(41824029-41824062)
chr4 (228-268)||(48647757-48647797)
chr4 (229-292)||(11511469-11511532)
chr4 (229-292)||(29977915-29977978)
chr4 (230-289)||(50813902-50813961)
chr4 (334-384)||(6034172-6034222)
chr4 (334-384)||(48182971-48183021)
chr4 (181-211)||(56436338-56436368)
chr4 (353-386)||(3481791-3481824)
chr4 (227-292)||(23608263-23608328)
chr4 (343-388)||(30036996-30037041)
chr4 (337-386)||(40574910-40574959)
chr4 (227-292)||(54473540-54473605)
chr4 (227-267)||(480479-480519)
chr4 (330-386)||(48647646-48647702)
[»] chr3 (20 HSPs)
chr3 (229-292)||(13898062-13898125)
chr3 (229-292)||(14623846-14623909)
chr3 (330-392)||(35536750-35536812)
chr3 (330-386)||(14623759-14623815)
chr3 (229-292)||(8956792-8956855)
chr3 (330-392)||(13897969-13898031)
chr3 (337-391)||(20764830-20764884)
chr3 (330-392)||(30801647-30801709)
chr3 (330-386)||(8076517-8076573)
chr3 (330-386)||(8956886-8956942)
chr3 (229-292)||(35536656-35536719)
chr3 (334-384)||(17470533-17470583)
chr3 (330-386)||(35093709-35093765)
chr3 (229-292)||(31456719-31456782)
chr3 (343-386)||(35965702-35965745)
chr3 (230-292)||(27714898-27714960)
chr3 (330-392)||(43746463-43746525)
chr3 (351-392)||(24699869-24699910)
chr3 (232-292)||(8076426-8076486)
chr3 (330-386)||(33118770-33118826)
[»] chr6 (9 HSPs)
chr6 (330-391)||(31952945-31953006)
chr6 (229-288)||(31953041-31953100)
chr6 (337-386)||(31976379-31976428)
chr6 (343-386)||(22421999-22422042)
chr6 (334-389)||(28536405-28536460)
chr6 (334-384)||(11427746-11427796)
chr6 (334-384)||(29857955-29858005)
chr6 (334-384)||(32869806-32869856)
chr6 (229-292)||(28536495-28536556)
[»] chr5 (12 HSPs)
chr5 (229-292)||(33825331-33825394)
chr5 (229-292)||(16327931-16327994)
chr5 (330-386)||(33825244-33825300)
chr5 (334-379)||(13811780-13811825)
chr5 (330-386)||(31009112-31009168)
chr5 (331-386)||(9603938-9603993)
chr5 (330-386)||(2177488-2177544)
chr5 (229-292)||(42414309-42414372)
chr5 (334-384)||(2740402-2740452)
chr5 (229-267)||(14831844-14831882)
chr5 (334-384)||(14831942-14831992)
chr5 (330-388)||(35943810-35943868)
[»] chr8 (12 HSPs)
chr8 (330-392)||(42354502-42354564)
chr8 (330-386)||(8841352-8841408)
chr8 (330-386)||(10284551-10284607)
chr8 (334-384)||(12831175-12831225)
chr8 (330-386)||(5957954-5958010)
chr8 (334-384)||(504043-504093)
chr8 (334-384)||(14548050-14548100)
chr8 (334-384)||(23122519-23122569)
chr8 (337-386)||(4854783-4854832)
chr8 (227-292)||(12831075-12831140)
chr8 (232-292)||(8841439-8841499)
chr8 (229-289)||(34307246-34307306)
[»] chr1 (10 HSPs)
chr1 (332-393)||(11152291-11152352)
chr1 (227-292)||(13414789-13414854)
chr1 (337-386)||(32813378-32813427)
chr1 (348-388)||(49811445-49811485)
chr1 (337-392)||(45044474-45044529)
chr1 (334-384)||(9474798-9474848)
chr1 (334-384)||(41758933-41758983)
chr1 (348-389)||(23597008-23597049)
chr1 (337-386)||(37926358-37926407)
chr1 (230-267)||(47452352-47452389)
[»] chr2 (14 HSPs)
chr2 (337-393)||(41758718-41758774)
chr2 (330-386)||(20700939-20700995)
chr2 (351-389)||(41575273-41575311)
chr2 (229-292)||(7465742-7465805)
chr2 (229-292)||(9058510-9058573)
chr2 (229-292)||(33436107-33436170)
chr2 (229-267)||(5574520-5574558)
chr2 (334-384)||(10249304-10249354)
chr2 (334-384)||(13438471-13438521)
chr2 (353-391)||(33436348-33436386)
chr2 (336-393)||(38732484-38732541)
chr2 (337-386)||(40613822-40613871)
chr2 (227-260)||(43490149-43490182)
chr2 (336-384)||(27864821-27864869)
[»] chr7 (17 HSPs)
chr7 (337-386)||(46033721-46033770)
chr7 (330-386)||(27744229-27744285)
chr7 (330-386)||(35468775-35468831)
chr7 (334-379)||(19436114-19436159)
chr7 (337-386)||(46374744-46374793)
chr7 (228-292)||(16374831-16374895)
chr7 (336-384)||(36362144-36362192)
chr7 (342-390)||(39255840-39255888)
chr7 (330-386)||(41423806-41423862)
chr7 (229-292)||(18207210-18207272)
chr7 (337-392)||(35523007-35523062)
chr7 (334-384)||(4999436-4999486)
chr7 (229-267)||(35137563-35137601)
chr7 (353-386)||(16374744-16374777)
chr7 (353-386)||(21234548-21234581)
chr7 (227-292)||(38267068-38267133)
chr7 (336-384)||(36361847-36361895)
[»] scaffold0237 (1 HSPs)
scaffold0237 (334-384)||(4157-4207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (337-386)||(8783-8832)
[»] scaffold1268 (1 HSPs)
scaffold1268 (330-386)||(849-905)
[»] scaffold1267 (1 HSPs)
scaffold1267 (330-386)||(849-905)
[»] scaffold0018 (1 HSPs)
scaffold0018 (229-273)||(152528-152572)


Alignment Details
Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 56436498 - 56436371
Alignment:
Q  9 gagatgaaaatggagggtgattgctgttgcagggagaaaaggggaagaacggagtcgaattacccctctatttcacgccaaatccattcctgttctattt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56436498 gagatgaaaatggagggtgattgctgttgcagggagaaaaggggaagaacggagtcgaattacccctctatttcacgccaaatccattcctgttctattt 56436399  T
Q  109 gtgtcaaagattgtgcctatttatttat 136  Q
    |||||||| ||||||||||||| |||||    
T  56436398 gtgtcaaaaattgtgcctatttttttat 56436371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 29240010 - 29240071
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttcttt 391  Q
    |||||||||||| |||| |||  |||||| ||||||| ||||||||||||||||||| ||||    
T  29240010 ctagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacattttccttt 29240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 31910323 - 31910372
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||| |||  |||||| |||||||||||||||||||||||||||    
T  31910323 atgggatgtacaagagtgtatgggaataaatggtgtctatgtaacatttt 31910372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 41824029 - 41824062
Alignment:
Q  353 tgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||||||||||||||||||||||||||||||||    
T  41824029 tgtatgagaataaatggtgtctatgtaacatttt 41824062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 48647797 - 48647757
Alignment:
Q  228 acaatacaccccttgacacccacataaaaatctaacacgtg 268  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  48647797 acaatacacctcttaacacccacataaaaatctaacacgtg 48647757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 11511532 - 11511469
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| ||||||||||||||||||||| ||||||  ||| ||| ||| | |||||||||    
T  11511532 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 11511469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 29977915 - 29977978
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||||||||| ||||||||| |||||||| ||||||  |||| || ||| |||||||||||    
T  29977915 caatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcac 29977978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 289
Target Start/End: Complemental strand, 50813961 - 50813902
Alignment:
Q  230 aatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaag 289  Q
    |||||||||||||||||||||| |||||||| ||| ||| |||| |||||| | ||||||    
T  50813961 aatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 6034172 - 6034222
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  6034172 tgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 48183021 - 48182971
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  48183021 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 56436368 - 56436338
Alignment:
Q  181 tagtatattcgtaatattatatttttaactt 211  Q
    |||||||||||||||||||||||||||||||    
T  56436368 tagtatattcgtaatattatatttttaactt 56436338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 3481791 - 3481824
Alignment:
Q  353 tgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||||| |||||||||||||||||||    
T  3481791 tgtatgagaataaagggtgtctatgtaacatttt 3481824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 23608263 - 23608328
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||  |||||||||||| |||||||| ||||||  ||| ||||||  |||||||||||    
T  23608263 gacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcac 23608328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 30036996 - 30037041
Alignment:
Q  343 tgtagaaggatgtatgagaataaatggtgtctatgtaacatttttc 388  Q
    |||| |||||||||||| |||||| ||||||||||||| |||||||    
T  30036996 tgtacaaggatgtatgaaaataaagggtgtctatgtaatatttttc 30037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 40574910 - 40574959
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| |||||||||||||| ||||||||| |||||||||    
T  40574910 atggggtgtacaagggtgtatgagaataaaaggtgtctatctaacatttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 54473605 - 54473540
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||  |||||||||||| |||||||||||||||  ||| ||| ||| | |||||||||    
T  54473605 gacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 54473540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 480519 - 480479
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgt 267  Q
    |||||||||||| |||||||||||| |||||||| ||||||    
T  480519 gacaatacaccctttgacacccacacaaaaatctgacacgt 480479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 48647702 - 48647646
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||||||| | ||||| || ||||||| | |||||||| |||||||||||||||||    
T  48647702 ctagtgcatagaatgtacaaagatgtataaaaataaatgatgtctatgtaacatttt 48647646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 13898125 - 13898062
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  13898125 caatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcac 13898062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 14623909 - 14623846
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  14623909 caatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcac 14623846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 35536750 - 35536812
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  35536750 ctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttcctttt 35536812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 14623815 - 14623759
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  14623815 ctagtgcatgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 14623759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 8956792 - 8956855
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||| || ||||||||||||||||||| | ||||||||||||||| |||| ||||||||||    
T  8956792 caatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcac 8956855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 13898031 - 13897969
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    |||||| ||||| |||||||   |||||||||||||||||||||||| |||||||||||||||    
T  13898031 ctagtgtatggggtgtagaaaagtgtatgagaataaatggtgtctatctaacatttttctttt 13897969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 20764884 - 20764830
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttcttt 391  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  20764884 atggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttccttt 20764830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 30801709 - 30801647
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    ||||| |||||| |||| |||| |||||||||||||| ||||||||||||||||||| |||||    
T  30801709 ctagtacatggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcctttt 30801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 8076517 - 8076573
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| ||   ||||||||||||||||||||||||||||||||||    
T  8076517 ctagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacatttt 8076573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 8956886 - 8956942
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||||||  || ||||||||| |||||||||||||||| |||||||||||||||||    
T  8956886 ctagtgcacagggtgtagaagggtgtatgagaataaatgctgtctatgtaacatttt 8956942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 35536656 - 35536719
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||  ||||||||||||||||||| | ||||||| ||||||| |||| ||||||||||    
T  35536656 caatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcac 35536719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 17470533 - 17470583
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||| ||||    
T  17470533 tgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcatt 17470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 35093709 - 35093765
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||| |||||| || | |||||||||||||||| |||||| ||||||||||    
T  35093709 ctagtgcatgagatgtacaaaggtgtatgagaataaatgatgtctaggtaacatttt 35093765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 31456719 - 31456782
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| |||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||    
T  31456719 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 31456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 35965745 - 35965702
Alignment:
Q  343 tgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||| |||| |||||||||||||| |||||||||||||||||||    
T  35965745 tgtacaagggtgtatgagaataaaaggtgtctatgtaacatttt 35965702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 27714960 - 27714898
Alignment:
Q  230 aatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||||| |||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||    
T  27714960 aatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 27714898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 43746463 - 43746525
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    |||||||||| | |||| |||| ||||||| || ||| ||||| |||||||||||||||||||    
T  43746463 ctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatttttctttt 43746525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 392
Target Start/End: Complemental strand, 24699910 - 24699869
Alignment:
Q  351 gatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  24699910 gatgtatgagaataaaagatgtctatgtaacattttcctttt 24699869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 8076426 - 8076486
Alignment:
Q  232 tacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||| |||||||||||| |||||||||||||||  ||| ||| ||| | |||||||||    
T  8076426 tacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 8076486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 33118826 - 33118770
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||| ||||||  |||||| |||||||| ||||||||||    
T  33118826 ctagtgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacatttt 33118770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 31953006 - 31952945
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttcttt 391  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31953006 ctagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttccttt 31952945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 31953100 - 31953041
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaa 288  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  31953100 caatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaa 31953041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 31976379 - 31976428
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  31976379 atggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatttt 31976428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 386
Target Start/End: Complemental strand, 22422042 - 22421999
Alignment:
Q  343 tgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  22422042 tgtacaagggtgtatgagaataaatggtgtctatgtaacatttt 22421999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Complemental strand, 28536460 - 28536405
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttct 389  Q
    |||||||| |||| |||| ||||||| |||||||| |||| |||||||||||||||    
T  28536460 tgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgtaacatttttct 28536405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 11427746 - 11427796
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  11427746 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 29857955 - 29858005
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||| ||||    
T  29857955 tgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 32869806 - 32869856
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  32869806 tgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 28536556 - 28536495
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||| ||||||||||||||| |||||||| ||||  | ||||||| ||| |||||||||||    
T  28536556 caatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcac 28536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 33825394 - 33825331
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  33825394 caatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcac 33825331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 16327931 - 16327994
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||| || ||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  16327931 caatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcac 16327994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 33825300 - 33825244
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  33825300 ctagtgcatggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacatttt 33825244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 13811780 - 13811825
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgta 379  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  13811780 tgcatgggatgtacaaggatgtatgggaataaatggtgtctatgta 13811825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 31009112 - 31009168
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| || | |||||||||||||| |||||||||||||||||||    
T  31009112 ctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacatttt 31009168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 9603938 - 9603993
Alignment:
Q  331 tagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||| ||||||||| || | ||||||||||||||||||||||| ||||||||||    
T  9603938 tagtgcttgggatgtacaaaggtgtatgagaataaatggtgtctacgtaacatttt 9603993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 2177488 - 2177544
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||||||| ||||||| |||| ||||||||||||||  |||||| |||||||||||    
T  2177488 ctagtgcattggatgtacaagggtgtatgagaataaaatgtgtctctgtaacatttt 2177544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 42414372 - 42414309
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| |||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||    
T  42414372 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 42414309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 2740402 - 2740452
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||||||||||| |||| |||||| ||||||| |||||||||||| ||||    
T  2740402 tgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcatt 2740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 14831844 - 14831882
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgt 267  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  14831844 caatacaccctttgacacccacataaaaatctgacacgt 14831882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 14831942 - 14831992
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  14831942 tgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 35943868 - 35943810
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttc 388  Q
    |||||||||||| |||| |||| ||||||  ||||||  ||||||||||||||||||||    
T  35943868 ctagtgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatttttc 35943810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 42354564 - 42354502
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  42354564 ctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttcctttt 42354502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 8841408 - 8841352
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||  ||||||||||||||||||||||||||||||||||    
T  8841408 ctagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacatttt 8841352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 10284607 - 10284551
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||| ||||| |||||||| |||||||||||||||||||    
T  10284607 ctagtgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacatttt 10284551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 12831175 - 12831225
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||| ||||    
T  12831175 tgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 5957954 - 5958010
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||| | |||| |||| |||||||||||||| ||||| |||||||||||||    
T  5957954 ctagtgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacatttt 5958010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 504093 - 504043
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  504093 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 14548050 - 14548100
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  14548050 tgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14548100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 23122569 - 23122519
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  23122569 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 4854832 - 4854783
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||| |||| | ||||||||||||  ||||||||||||||||||    
T  4854832 atgggatgtacaagggtatatgagaataaagagtgtctatgtaacatttt 4854783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 12831075 - 12831140
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||| |||||||||||| |||||||| ||||||  ||| ||| ||| | |||||||||    
T  12831075 gacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 12831140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 8841499 - 8841439
Alignment:
Q  232 tacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||| |||||||||||| |||||||||||||||  ||| ||| ||| | |||||||||    
T  8841499 tacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 8841439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Original strand, 34307246 - 34307306
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaag 289  Q
    ||||||||||||||||||||||| |||||||| ||| |||  ||| |||||| | ||||||    
T  34307246 caatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaag 34307306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 11152352 - 11152291
Alignment:
Q  332 agtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttta 393  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  11152352 agtgcatggggtgtagaaggatgtatgagaataaatggtgtctatataacattttcctttta 11152291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 13414789 - 13414854
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||| |||||||||||| |||||||||||||||  ||| ||| ||| |||||||||||    
T  13414789 gacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcac 13414854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 32813378 - 32813427
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| |||||| |||||||||||||||||||||||||||    
T  32813378 atggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatttt 32813427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 49811485 - 49811445
Alignment:
Q  348 aaggatgtatgagaataaatggtgtctatgtaacatttttc 388  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  49811485 aagggtgtatgagaataaagggtgtctatgtaacatttttc 49811445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Complemental strand, 45044529 - 45044474
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||||||||| |||||    
T  45044529 atggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttcctttt 45044474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 9474848 - 9474798
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||||||||||| |||| ||||||||||||||  ||||||||||| ||||    
T  9474848 tgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcatt 9474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 41758933 - 41758983
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  41758933 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 23597049 - 23597008
Alignment:
Q  348 aaggatgtatgagaataaatggtgtctatgtaacatttttct 389  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  23597049 aaggatgtatgagaataaaaaatgtctatgtaacatttttct 23597008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 37926407 - 37926358
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| ||||||||||| ||||||||||||||||| ||| |||||    
T  37926407 atggggtgtacaaggatgtatgtgaataaatggtgtctatataatatttt 37926358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 47452389 - 47452352
Alignment:
Q  230 aatacaccccttgacacccacataaaaatctaacacgt 267  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  47452389 aatacaccctttgacacccacacaaaaatctaacacgt 47452352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 41758718 - 41758774
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttta 393  Q
    ||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  41758718 atggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatttttctttta 41758774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 20700939 - 20700995
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||| |||||| ||||||| |||||||||||||||||||    
T  20700939 ctagtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatttt 20700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 41575273 - 41575311
Alignment:
Q  351 gatgtatgagaataaatggtgtctatgtaacatttttct 389  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  41575273 gatgtatgagaataaatagtgtctatgtaacatttttct 41575311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 7465805 - 7465742
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| |||||||||||| |||||||| ||||||  ||| ||| ||| |||||||||||    
T  7465805 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcac 7465742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 9058510 - 9058573
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| |||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||    
T  9058510 caatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcac 9058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 33436170 - 33436107
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||| |||||||||||| |||||||||||||||  ||| ||| ||| | |||||||||    
T  33436170 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcac 33436107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 5574558 - 5574520
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgt 267  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  5574558 caatacaccctttgacacccacataaaaatctgacacgt 5574520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 10249354 - 10249304
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  10249354 tgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 13438471 - 13438521
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| ||||||||||| ||||||| |||||||||||| ||||    
T  13438471 tgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Original strand, 33436348 - 33436386
Alignment:
Q  353 tgtatgagaataaatggtgtctatgtaacatttttcttt 391  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  33436348 tgtatgagaataaaaggtgtctatgtaacattttccttt 33436386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 38732484 - 38732541
Alignment:
Q  336 catgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttta 393  Q
    |||| |||||| |||||||||||  | |||| ||||||||||||||||||| ||||||    
T  38732484 catgagatgtacaaggatgtatgcaattaaaaggtgtctatgtaacattttcctttta 38732541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 40613871 - 40613822
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| |||||| ||||||| |||||||||||||||||||    
T  40613871 atggggtgtacaagggtgtatgggaataaagggtgtctatgtaacatttt 40613822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 43490149 - 43490182
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatct 260  Q
    ||||||||||||||||||||||||| ||||||||    
T  43490149 gacaatacaccccttgacacccacacaaaaatct 43490182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 27864821 - 27864869
Alignment:
Q  336 catgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||||||||| |||| |||||||||||||| |||||| ||||| ||||    
T  27864821 catgggatgtacaagggtgtatgagaataaagggtgtcaatgtatcatt 27864869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 46033770 - 46033721
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  46033770 atggggtgtacaagggtgtatgagaataaatggtgtctatgtaacatttt 46033721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 27744285 - 27744229
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| ||| |||||||||    
T  27744285 ctagtgcatgggatgtacaaggatatatgggaataaatggtgtttatataacatttt 27744229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 35468831 - 35468775
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||||| ||||||||||||||||||| ||||| |||||||||||||    
T  35468831 ctagttcatgagatgtataaggatgtatgagaataaaaggtgtatatgtaacatttt 35468775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 19436159 - 19436114
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgta 379  Q
    |||||||| |||| |||| |||||||||||||||||||||||||||    
T  19436159 tgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 46374793 - 46374744
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| |||||| |||||||||||||||||||||||||||    
T  46374793 atggggtgtacaagggtgtatgggaataaatggtgtctatgtaacatttt 46374744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 16374895 - 16374831
Alignment:
Q  228 acaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||| ||||||||| ||||| |||||||| ||||||| ||| ||| | |||||||||||||    
T  16374895 acaatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcac 16374831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 36362144 - 36362192
Alignment:
Q  336 catgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||||||||| |||| |||||||||||||| |||||||||||| ||||    
T  36362144 catgggatgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Complemental strand, 39255888 - 39255840
Alignment:
Q  342 atgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctt 390  Q
    ||||| |||| ||||||| |||||| |||||||||||||||||||||||    
T  39255888 atgtacaagggtgtatgataataaagggtgtctatgtaacatttttctt 39255840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 386
Target Start/End: Original strand, 41423806 - 41423862
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| || | |||||||||||||| ||||| |||||||||||||    
T  41423806 ctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacatttt 41423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 292
Target Start/End: Original strand, 18207210 - 18207272
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    ||||||||| ||||||||||| | ||||||||||||||||  || ||||||| |||||||||||    
T  18207210 caatacacctcttgacacccatacaaaaatctaacacgtg-gcacgtgaaccccacacaagcac 18207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 35523007 - 35523062
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttttctttt 392  Q
    ||||| |||| |||| |||||| ||||||||||||| ||||||||||||| |||||    
T  35523007 atggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttcctttt 35523062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Complemental strand, 4999486 - 4999436
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||||||||||| |||||||||||| ||||    
T  4999486 tgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 35137563 - 35137601
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgt 267  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  35137563 caatacaccctttgacacccacacaaaaatctaacacgt 35137601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 16374777 - 16374744
Alignment:
Q  353 tgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||||| |||||||||||||||||||    
T  16374777 tgtatgagaataaagggtgtctatgtaacatttt 16374744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 386
Target Start/End: Original strand, 21234548 - 21234581
Alignment:
Q  353 tgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||||| |||||||||||||||||||    
T  21234548 tgtatgagaataaaaggtgtctatgtaacatttt 21234581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 38267068 - 38267133
Alignment:
Q  227 gacaatacaccccttgacacccacataaaaatctaacacgtgttcatgtgaacctcacacaagcac 292  Q
    |||||||||||| |||||||||||| |||||||| ||||||  ||| ||| ||| | |||||||||    
T  38267068 gacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 38267133  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 36361895 - 36361847
Alignment:
Q  336 catgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||| ||||    
T  36361895 catggaatgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36361847  T

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Target: scaffold0237 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 4157 - 4207
Alignment:
Q  334 tgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatt 384  Q
    |||||||| |||| |||| |||||| |||||||||||||||||||| ||||    
T  4157 tgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 4207  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 8832 - 8783
Alignment:
Q  337 atgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    ||||| |||| |||| ||||| |||||||| |||||||||||||||||||    
T  8832 atggggtgtacaagggtgtataagaataaaaggtgtctatgtaacatttt 8783  T

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Target: scaffold1268 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 905 - 849
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||  |||||| ||||||| ||||| |||||||||||||    
T  905 ctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatttt 849  T

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Target: scaffold1267 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 386
Target Start/End: Complemental strand, 905 - 849
Alignment:
Q  330 ctagtgcatgggatgtagaaggatgtatgagaataaatggtgtctatgtaacatttt 386  Q
    |||||||||||| |||| |||  |||||| ||||||| ||||| |||||||||||||    
T  905 ctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacatttt 849  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 152528 - 152572
Alignment:
Q  229 caatacaccccttgacacccacataaaaatctaacacgtgttcat 273  Q
    ||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  152528 caatacaccccttgacacccacacaaaaatctgacatgtggtcat 152572  T

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