View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3963_high_31 (Length: 316)
Name: NF3963_high_31
Description: NF3963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3963_high_31 |
 | |
|
| [»] chr5 (15 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 38452901 - 38452585
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
38452901 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatgaatgatgaatt |
38452802 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
38452801 |
tgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactacatgtcgtgaatgatgaattcgaagatattctaaaa |
38452702 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaa-ttttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattgg |
299 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38452701 |
tcgttttggaagcgttgctttttgaagcctaatgtagttctctaattttttttttgaagtgtagttaaattgtacggattcaaattgattaatatattgg |
38452602 |
T |
|
| Q |
300 |
ttcttttttatcatgga |
316 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
38452601 |
ttcttttttatcatgga |
38452585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 38170009 - 38170325
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
38170009 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttgtgaatgatgaatt |
38170108 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38170109 |
tgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
38170208 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcact-aattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattgg |
299 |
Q |
| |
|
|| |||||||||| |||||||||||| |||||||||||| || || |||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38170209 |
tcgttttggaagcattgctttttgaaggctaatgtagttctctaaaaaaaaaattgaagtgtagttaaattgtacggattcaaattgattaatatattgg |
38170308 |
T |
|
| Q |
300 |
ttcttttttatcatgga |
316 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
38170309 |
ttctattttatcatgga |
38170325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 38182591 - 38182276
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38182591 |
ctcctactacgcctccacatccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38182492 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38182491 |
tgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaa |
38182392 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38182391 |
tcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38182292 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38182291 |
tcttttttatcatgga |
38182276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 38188540 - 38188855
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38188540 |
ctcctactacgcctccacatccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38188639 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38188640 |
tgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaa |
38188739 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38188740 |
tcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38188839 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38188840 |
tcttttttatcatgga |
38188855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 38209817 - 38209502
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38209817 |
ctcctactacgcctccacatccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38209718 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38209717 |
tgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaa |
38209618 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38209617 |
tcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38209518 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38209517 |
tcttttttatcatgga |
38209502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 38220127 - 38220373
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
38220127 |
ctcctactacgcctccacctccgtccatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatgaatgatgaatt |
38220226 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38220227 |
tgaagatattctaaaattttatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
38220326 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaatt |
247 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
38220327 |
tcgttttggaagtgttgctttttgaaacctaatgtagttctctaatt |
38220373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 38215765 - 38216080
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38215765 |
ctcctactacgcctccacatccgttcatggcgagtaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38215864 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38215865 |
tgaagatattctaaaattatatttgaagcgcaatttttttaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaa |
38215964 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
|| ||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38215965 |
tcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38216064 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38216065 |
tcttttttatcatgga |
38216080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 316
Target Start/End: Original strand, 38185798 - 38186112
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38185798 |
ctcctactacgcctccacatccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38185897 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38185898 |
tgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattctaaaa |
38185996 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
| ||||||||||||||||||||||| |||||| || || |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38185997 |
ttgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38186096 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38186097 |
tcttttttatcatgga |
38186112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 316
Target Start/End: Complemental strand, 38212559 - 38212245
Alignment:
| Q |
1 |
ctcctactacgcctccacctccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatt |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |||||||||| |
|
|
| T |
38212559 |
ctcctactacgcctccacatccgttcatggcgactaaggacacggttacaaaagctgagatgaagaaattttgcggaatacatgttgtgaatgatgaatt |
38212460 |
T |
|
| Q |
101 |
tgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| ||||||||||||||| |
|
|
| T |
38212459 |
tgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattctaaaa |
38212361 |
T |
|
| Q |
201 |
tctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggt |
300 |
Q |
| |
|
| ||||||||||||||||||||||| |||||| || || |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
38212360 |
ttgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggt |
38212261 |
T |
|
| Q |
301 |
tcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38212260 |
tcttttttatcatgga |
38212245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 137 - 316
Target Start/End: Original strand, 38220590 - 38220768
Alignment:
| Q |
137 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
38220590 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta |
38220689 |
T |
|
| Q |
237 |
gttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttttatcatgga |
316 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38220690 |
gttctctaattttcttttgaagtgtagtc-aattgtacggattcaaattgattaatatattggttctattttatcatgga |
38220768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 91 - 316
Target Start/End: Original strand, 38156187 - 38156409
Alignment:
| Q |
91 |
atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
38156187 |
atgatgaatttgaagatattctaaaattgtttttgaagcgcaatttttctaagaagaaggaatttcatggacttcatgttgtgaatgatgaattcgaaga |
38156286 |
T |
|
| Q |
191 |
tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta |
290 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| | ||||| ||||||||| || || |
|
|
| T |
38156287 |
tattctaaaatcgttttggaagcgttgctttttgaagcctaatgtagttctctaatttttttttgaagtgtagt--tactgtacagattcaaatcgagta |
38156384 |
T |
|
| Q |
291 |
atatattggttcttttttatcatgga |
316 |
Q |
| |
|
|||||||||||| ||||||||||||| |
|
|
| T |
38156385 |
atatattggttc-tttttatcatgga |
38156409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 38220372 - 38220482
Alignment:
| Q |
137 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
38220372 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta |
38220471 |
T |
|
| Q |
237 |
gttcactaatt |
247 |
Q |
| |
|
|||| |||||| |
|
|
| T |
38220472 |
gttctctaatt |
38220482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 38220481 - 38220591
Alignment:
| Q |
137 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
38220481 |
ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcattttggaagtgttgctttttgaaacctaatgta |
38220580 |
T |
|
| Q |
237 |
gttcactaatt |
247 |
Q |
| |
|
|||| |||||| |
|
|
| T |
38220581 |
gttctctaatt |
38220591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 197
Target Start/End: Original strand, 38443690 - 38443853
Alignment:
| Q |
34 |
ctaaggacacggttacaaaagctgagatgaagaaatttcgcggactacatgttatggatgatgaatttgaagatattctaaaattgtatttgacgtgcaa |
133 |
Q |
| |
|
||||||| ||||| |||||| || |||||||| |||||| ||||| ||| | || |||||||||||||||||||||||||| ||| ||||| | | || |
|
|
| T |
38443690 |
ctaaggatacggtcacaaaaactaagatgaagcaatttcatggactgcatatcgtgaatgatgaatttgaagatattctaaaactgtttttgaagcgtaa |
38443789 |
T |
|
| Q |
134 |
tttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattcta |
197 |
Q |
| |
|
|||||| ||| |||||||||||| ||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
38443790 |
tttttcaaagaagaaggaatttcatggactacacatcgtgaacgatgaattcgaagatattcta |
38443853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 38443718 - 38443772
Alignment:
| Q |
146 |
gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa |
200 |
Q |
| |
|
|||| ||||||| ||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
38443718 |
gaagcaatttcatggactgcatatcgtgaatgatgaatttgaagatattctaaaa |
38443772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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