View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3963_low_39 (Length: 291)

Name: NF3963_low_39
Description: NF3963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3963_low_39
NF3963_low_39
[»] chr4 (41 HSPs)
chr4 (13-273)||(28300293-28300565)
chr4 (206-269)||(23819098-23819161)
chr4 (190-261)||(51630104-51630175)
chr4 (17-75)||(28289441-28289499)
chr4 (206-263)||(47145971-47146028)
chr4 (199-256)||(53673669-53673726)
chr4 (192-268)||(43932430-43932506)
chr4 (206-250)||(47800632-47800676)
chr4 (206-269)||(2996582-2996645)
chr4 (206-269)||(4471177-4471240)
chr4 (189-268)||(7694009-7694088)
chr4 (190-265)||(20907340-20907415)
chr4 (206-269)||(46019627-46019690)
chr4 (206-263)||(17884077-17884134)
chr4 (190-255)||(18628555-18628620)
chr4 (13-74)||(28281334-28281395)
chr4 (200-269)||(35743285-35743354)
chr4 (190-274)||(23459621-23459705)
chr4 (225-269)||(27123350-27123394)
chr4 (190-242)||(29778788-29778840)
chr4 (199-242)||(18011873-18011916)
chr4 (206-249)||(24169272-24169315)
chr4 (225-256)||(25548139-25548170)
chr4 (206-269)||(29263379-29263442)
chr4 (102-136)||(4212813-4212847)
chr4 (206-264)||(10192293-10192350)
chr4 (208-250)||(10206185-10206227)
chr4 (206-256)||(16494816-16494866)
chr4 (227-273)||(42461281-42461327)
chr4 (206-268)||(50742835-50742897)
chr4 (231-268)||(24747353-24747390)
chr4 (200-249)||(28615526-28615575)
chr4 (206-263)||(40532598-40532655)
chr4 (208-253)||(47118979-47119024)
chr4 (189-262)||(49202637-49202710)
chr4 (225-269)||(1137740-1137784)
chr4 (217-269)||(19250566-19250618)
chr4 (189-256)||(25332766-25332834)
chr4 (217-269)||(46247225-46247277)
chr4 (206-266)||(52746841-52746901)
chr4 (216-256)||(53792590-53792630)
[»] chr1 (53 HSPs)
chr1 (189-274)||(34290228-34290313)
chr1 (206-256)||(26779936-26779986)
chr1 (207-269)||(37593682-37593744)
chr1 (190-271)||(14629962-14630043)
chr1 (206-269)||(10199406-10199469)
chr1 (210-269)||(46252680-46252739)
chr1 (199-269)||(4920768-4920838)
chr1 (205-263)||(15361048-15361106)
chr1 (189-251)||(43332476-43332538)
chr1 (189-265)||(6279391-6279467)
chr1 (189-269)||(7136996-7137076)
chr1 (190-254)||(38867844-38867908)
chr1 (206-269)||(25479590-25479653)
chr1 (215-273)||(38503458-38503517)
chr1 (203-269)||(6292499-6292565)
chr1 (206-256)||(16322858-16322908)
chr1 (215-269)||(28689450-28689504)
chr1 (190-268)||(31517739-31517817)
chr1 (206-268)||(37842354-37842416)
chr1 (190-268)||(44031998-44032076)
chr1 (189-254)||(4700079-4700144)
chr1 (216-269)||(8016276-8016329)
chr1 (225-269)||(5276321-5276365)
chr1 (221-269)||(38170688-38170736)
chr1 (225-269)||(43722326-43722370)
chr1 (206-269)||(4576814-4576877)
chr1 (218-269)||(5886992-5887043)
chr1 (206-269)||(27140487-27140550)
chr1 (206-269)||(35017585-35017648)
chr1 (210-269)||(35925703-35925762)
chr1 (203-265)||(4445714-4445776)
chr1 (199-269)||(4868402-4868472)
chr1 (189-251)||(7472303-7472365)
chr1 (227-269)||(11695891-11695933)
chr1 (206-256)||(12564510-12564560)
chr1 (102-136)||(45855732-45855766)
chr1 (227-269)||(47877139-47877181)
chr1 (191-256)||(2294905-2294970)
chr1 (206-251)||(5047155-5047200)
chr1 (207-256)||(11893604-11893653)
chr1 (208-253)||(26461955-26462000)
chr1 (189-269)||(32515439-32515520)
chr1 (236-269)||(47917275-47917308)
chr1 (235-263)||(1725183-1725211)
chr1 (215-251)||(9602676-9602712)
chr1 (215-251)||(19092399-19092435)
chr1 (206-269)||(19389910-19389974)
chr1 (102-138)||(27820493-27820529)
chr1 (206-254)||(29270294-29270342)
chr1 (221-269)||(30815651-30815699)
chr1 (197-269)||(37811852-37811924)
chr1 (190-242)||(44422692-44422744)
chr1 (190-242)||(52286671-52286723)
[»] chr7 (28 HSPs)
chr7 (199-269)||(25596035-25596105)
chr7 (200-269)||(7244683-7244752)
chr7 (203-251)||(12792579-12792627)
chr7 (206-269)||(529384-529447)
chr7 (194-269)||(6552290-6552365)
chr7 (190-256)||(7623131-7623197)
chr7 (189-241)||(12110352-12110404)
chr7 (190-262)||(28165084-28165156)
chr7 (190-230)||(34441082-34441122)
chr7 (189-256)||(44821951-44822018)
chr7 (206-269)||(45859525-45859587)
chr7 (203-249)||(12792642-12792688)
chr7 (216-269)||(21247944-21247998)
chr7 (224-254)||(22204495-22204525)
chr7 (224-254)||(22230214-22230244)
chr7 (215-269)||(43250697-43250751)
chr7 (206-269)||(48917342-48917407)
chr7 (206-267)||(24363601-24363662)
chr7 (217-274)||(35267382-35267439)
chr7 (189-242)||(46104327-46104380)
chr7 (197-269)||(9423592-9423664)
chr7 (203-251)||(12792514-12792562)
chr7 (217-269)||(25670584-25670636)
chr7 (221-269)||(29286815-29286863)
chr7 (206-262)||(34035926-34035982)
chr7 (225-269)||(46082064-46082108)
chr7 (206-242)||(46086456-46086492)
chr7 (206-250)||(47130802-47130846)
[»] chr3 (48 HSPs)
chr3 (191-269)||(52440660-52440738)
chr3 (199-269)||(37273136-37273206)
chr3 (189-269)||(39602208-39602288)
chr3 (215-269)||(47513671-47513725)
chr3 (206-271)||(20669181-20669246)
chr3 (216-269)||(36139897-36139950)
chr3 (206-267)||(36887513-36887574)
chr3 (192-256)||(2719463-2719527)
chr3 (225-269)||(3044257-3044301)
chr3 (225-269)||(25925770-25925814)
chr3 (206-262)||(35394503-35394559)
chr3 (189-269)||(54837032-54837112)
chr3 (210-269)||(33883748-33883807)
chr3 (206-269)||(52619012-52619075)
chr3 (203-253)||(34924552-34924602)
chr3 (206-268)||(40665438-40665500)
chr3 (215-269)||(42745056-42745110)
chr3 (216-269)||(36101587-36101640)
chr3 (207-256)||(41671320-41671369)
chr3 (217-269)||(5166343-5166395)
chr3 (229-269)||(5391911-5391951)
chr3 (225-269)||(45432937-45432981)
chr3 (206-269)||(20502066-20502129)
chr3 (193-256)||(24281044-24281106)
chr3 (206-269)||(24785214-24785277)
chr3 (215-266)||(29771856-29771907)
chr3 (201-256)||(34414795-34414850)
chr3 (215-262)||(38902084-38902131)
chr3 (102-145)||(46886843-46886886)
chr3 (204-242)||(2825154-2825192)
chr3 (100-134)||(5495810-5495844)
chr3 (215-269)||(23808062-23808116)
chr3 (206-248)||(25170817-25170858)
chr3 (206-256)||(34382951-34383001)
chr3 (227-265)||(43116443-43116481)
chr3 (207-256)||(13371127-13371176)
chr3 (206-251)||(21367676-21367721)
chr3 (199-256)||(26478947-26479004)
chr3 (228-269)||(36445856-36445897)
chr3 (205-250)||(36878774-36878819)
chr3 (204-269)||(45541578-45541643)
chr3 (102-138)||(5456741-5456777)
chr3 (204-256)||(16790389-16790441)
chr3 (209-249)||(24280723-24280763)
chr3 (206-262)||(26320107-26320163)
chr3 (206-269)||(33965486-33965550)
chr3 (102-134)||(34034042-34034074)
chr3 (190-269)||(41724204-41724284)
[»] chr6 (32 HSPs)
chr6 (192-269)||(31624085-31624162)
chr6 (206-269)||(6647396-6647459)
chr6 (215-274)||(13908481-13908540)
chr6 (199-269)||(33887832-33887902)
chr6 (204-269)||(4420650-4420715)
chr6 (189-269)||(769131-769210)
chr6 (205-265)||(17241254-17241314)
chr6 (222-269)||(6536972-6537019)
chr6 (206-269)||(30863255-30863318)
chr6 (223-269)||(9027604-9027650)
chr6 (206-268)||(31583688-31583750)
chr6 (204-249)||(2455817-2455862)
chr6 (216-269)||(3528822-3528875)
chr6 (225-269)||(2460149-2460193)
chr6 (225-269)||(7931724-7931768)
chr6 (190-265)||(5566179-5566254)
chr6 (206-269)||(20368178-20368241)
chr6 (190-269)||(21024204-21024283)
chr6 (215-265)||(32206015-32206065)
chr6 (206-251)||(835265-835310)
chr6 (206-251)||(1497990-1498035)
chr6 (227-256)||(2023397-2023426)
chr6 (215-256)||(9559553-9559594)
chr6 (207-256)||(20512655-20512704)
chr6 (206-251)||(27894055-27894100)
chr6 (224-269)||(34403882-34403927)
chr6 (225-269)||(9667983-9668027)
chr6 (206-254)||(20370892-20370940)
chr6 (206-250)||(26694887-26694931)
chr6 (225-269)||(27909636-27909680)
chr6 (206-242)||(31812038-31812074)
chr6 (222-262)||(34882426-34882466)
[»] chr5 (41 HSPs)
chr5 (206-269)||(13604847-13604910)
chr5 (190-269)||(32408590-32408669)
chr5 (206-269)||(11707064-11707127)
chr5 (189-256)||(12425563-12425630)
chr5 (206-269)||(17258881-17258944)
chr5 (206-269)||(33533537-33533600)
chr5 (206-269)||(36639531-36639594)
chr5 (206-269)||(5284446-5284509)
chr5 (193-256)||(18906338-18906401)
chr5 (206-269)||(21768195-21768258)
chr5 (199-256)||(7319019-7319076)
chr5 (206-262)||(4014429-4014485)
chr5 (189-269)||(10272429-10272509)
chr5 (220-256)||(31694541-31694577)
chr5 (191-263)||(39594801-39594873)
chr5 (218-269)||(8089957-8090008)
chr5 (189-248)||(18637039-18637098)
chr5 (190-269)||(33234354-33234433)
chr5 (206-269)||(41957449-41957512)
chr5 (102-136)||(3520302-3520336)
chr5 (215-269)||(12459999-12460053)
chr5 (215-269)||(12521546-12521600)
chr5 (190-256)||(12975340-12975405)
chr5 (199-269)||(13264103-13264172)
chr5 (190-248)||(35553207-35553265)
chr5 (216-269)||(2092543-2092596)
chr5 (193-262)||(7984965-7985034)
chr5 (204-269)||(10125716-10125781)
chr5 (225-254)||(10296439-10296468)
chr5 (225-274)||(10638528-10638577)
chr5 (232-269)||(29281174-29281211)
chr5 (223-256)||(35531165-35531198)
chr5 (207-256)||(38104868-38104917)
chr5 (189-242)||(39105456-39105509)
chr5 (189-241)||(2563202-2563254)
chr5 (189-269)||(2568650-2568730)
chr5 (206-262)||(9202753-9202809)
chr5 (206-254)||(12242723-12242771)
chr5 (233-265)||(16863816-16863848)
chr5 (208-240)||(38829663-38829695)
chr5 (199-271)||(41052870-41052942)
[»] chr2 (39 HSPs)
chr2 (206-268)||(35379015-35379077)
chr2 (189-269)||(680495-680575)
chr2 (190-269)||(8017427-8017506)
chr2 (206-269)||(16867748-16867811)
chr2 (206-269)||(34652034-34652097)
chr2 (203-269)||(44443327-44443393)
chr2 (189-256)||(656788-656855)
chr2 (210-269)||(12313171-12313230)
chr2 (206-249)||(43985021-43985064)
chr2 (204-262)||(7928304-7928362)
chr2 (199-264)||(42817379-42817444)
chr2 (201-269)||(1939330-1939398)
chr2 (206-262)||(40682400-40682455)
chr2 (197-269)||(41817168-41817240)
chr2 (190-249)||(1056371-1056430)
chr2 (199-242)||(3067404-3067447)
chr2 (193-268)||(9556235-9556310)
chr2 (206-273)||(10563552-10563619)
chr2 (206-269)||(29316773-29316836)
chr2 (206-269)||(33941918-33941981)
chr2 (206-245)||(36863647-36863686)
chr2 (206-269)||(43910997-43911060)
chr2 (102-136)||(2416194-2416228)
chr2 (204-270)||(9530725-9530791)
chr2 (227-269)||(13234536-13234578)
chr2 (207-265)||(31096311-31096369)
chr2 (206-264)||(38078413-38078471)
chr2 (216-259)||(44644297-44644342)
chr2 (215-256)||(12464682-12464723)
chr2 (228-269)||(14666579-14666620)
chr2 (216-265)||(25790145-25790194)
chr2 (207-256)||(26372748-26372797)
chr2 (206-251)||(40279416-40279461)
chr2 (189-242)||(41875678-41875731)
chr2 (189-274)||(42419989-42420074)
chr2 (210-267)||(43199784-43199841)
chr2 (225-269)||(1056127-1056171)
chr2 (206-262)||(9174824-9174880)
chr2 (189-249)||(12464491-12464551)
[»] chr8 (36 HSPs)
chr8 (199-248)||(11494148-11494197)
chr8 (204-265)||(42215084-42215145)
chr8 (203-265)||(11493971-11494033)
chr8 (200-269)||(20672753-20672822)
chr8 (205-269)||(25869264-25869328)
chr8 (189-269)||(42215304-42215384)
chr8 (206-266)||(44236824-44236884)
chr8 (206-252)||(4762518-4762564)
chr8 (228-269)||(3600736-3600777)
chr8 (228-269)||(14339603-14339644)
chr8 (189-249)||(27028823-27028883)
chr8 (203-267)||(33714236-33714300)
chr8 (217-269)||(37822657-37822708)
chr8 (206-249)||(1433557-1433600)
chr8 (230-269)||(4281579-4281618)
chr8 (206-269)||(11569455-11569518)
chr8 (190-269)||(28769337-28769416)
chr8 (229-268)||(30389131-30389170)
chr8 (206-269)||(33553249-33553312)
chr8 (199-269)||(779059-779129)
chr8 (215-265)||(11185239-11185289)
chr8 (215-269)||(21653099-21653153)
chr8 (204-249)||(6875285-6875330)
chr8 (206-251)||(7714251-7714296)
chr8 (216-249)||(31875613-31875646)
chr8 (215-256)||(39866745-39866786)
chr8 (229-269)||(2594995-2595035)
chr8 (222-254)||(7039835-7039867)
chr8 (225-269)||(9700029-9700073)
chr8 (206-262)||(9956819-9956875)
chr8 (227-255)||(12132865-12132893)
chr8 (217-261)||(12558996-12559040)
chr8 (100-136)||(14956460-14956496)
chr8 (197-269)||(28784794-28784865)
chr8 (189-269)||(38421256-38421336)
chr8 (225-269)||(41606901-41606945)
[»] scaffold0089 (1 HSPs)
scaffold0089 (207-256)||(33638-33687)


Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 273
Target Start/End: Complemental strand, 28300565 - 28300293
Alignment:
Q  13 gagaatgaaagccccatcgcttgaccaggtccatgataagggtcctaaataaaccaaaa------------tcagtgaagtaaaagaaagagatttagac 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||    
T  28300565 gagaatgaaagccccattgcttgaccaggtccatgataagggtcctaaataaaccaaaaccaaaaccaaaatcagtgaagtaaaagaaagagatttagac 28300466  T
Q  101 ttgtttggataaccaacttattttcagcttatagcatatgtgcttgcaagttctataacgaaagaaaaaataaagttaaannnnnnnngtataagctgta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||        ||||||||| ||    
T  28300465 ttgtttggataaccaacttattttcagcttatagcatatgtgcttgcaagttctataatcaaagaaaaaataaagttaaattgtttttgtataagctata 28300366  T
Q  201 aactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggct 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28300365 aactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggct 28300293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 23819098 - 23819161
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||||||||||||||  ||||||| ||||||||||||| | ||||||||||    
T  23819098 ttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtcata 23819161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 51630104 - 51630175
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaac 261  Q
    |||||||| ||| ||||||||||| |||||||||||||  ||||||||||||| |||||||| |||| ||||    
T  51630104 tataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaacatcttacgaac 51630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 28289499 - 28289441
Alignment:
Q  17 atgaaagccccatcgcttgaccaggtccatgataagggtcctaaataaaccaaaatcag 75  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||  ||||||||||||    
T  28289499 atgaaagccccattgcttgaccaggtccatcataaggttcctaaaataaccaaaatcag 28289441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 47145971 - 47146028
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacat 263  Q
    ||||||||  || |||||||||||||||||||||||| ||||||||||||| ||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatgaacat 47146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 53673726 - 53673669
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||| |||||||| ||||||||| |||||||||| ||||||| |||||||||||||    
T  53673726 taaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaactta 53673669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 43932430 - 43932506
Alignment:
Q  192 taagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||| ||||||||||||||| | |||  |||||| ||| |||||||||| ||||||||||||| | |||||||||    
T  43932430 taagctataaactattttcataagttattctgaagaacttgtgaaaataagatgaaaacaacttatggacatgtcat 43932506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 47800632 - 47800676
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaac 250  Q
    |||||||| |||||||||||||||||||||||||||| |||||||    
T  47800632 ttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 2996582 - 2996645
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||| | |||| | ||||||||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcata 2996645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 4471177 - 4471240
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||||| ||||| ||||||||||||||| |||||||| | | ||||||||    
T  4471177 ttttcataagctatcttgaaaagcttctgaaaataagttgaatacaacttatggatatgtcata 4471240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 7694088 - 7694009
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    ||||||||| ||| || |||||||| | |||| || |||| ||||| ||||||| ||||||||||||| |||||||||||    
T  7694088 gtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcat 7694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 20907340 - 20907415
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||||| |||||| |||||| | |||||| |||||| |  |||||||||||||||||||||||||  |||||||    
T  20907340 tataagctataaactgttttcacaagctatcctgaagaaccaatgaaaataagttgaaaacaacttataaacatgt 20907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 46019690 - 46019627
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| | ||||  |||||||||||||| |||||||||||||||||||  |||||||||||    
T  46019690 ttttcataagttatcccgaagagcttatgaatataagttgaaaacaacttatcaacatgtcata 46019627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 17884077 - 17884134
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacat 263  Q
    |||||||| ||||| ||| ||||||||||||||| || ||||||||||||| ||||||    
T  17884077 ttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaacat 17884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 18628620 - 18628555
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactt 255  Q
    |||||| | |||||| |||||||| | ||||||| |||||||||| ||||||| ||||||||||||    
T  18628620 tataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 28281395 - 28281334
Alignment:
Q  13 gagaatgaaagccccatcgcttgaccaggtccatgataagggtcctaaataaaccaaaatca 74  Q
    |||||||| |||||||| |||||||||||||||  |||||| |||||||  |||||||||||    
T  28281395 gagaatgatagccccattgcttgaccaggtccagaataaggttcctaaaagaaccaaaatca 28281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 35743285 - 35743354
Alignment:
Q  200 aaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| |||||||  ||||| ||||||| ||||| |||||||||| ||||||||||  |||||||||||    
T  35743285 aaactactttcataaactatcatgaagagtttatggaaataagttggaaacaacttataaacatgtcata 35743354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 274
Target Start/End: Original strand, 23459621 - 23459705
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    |||||||| ||| || |||||||| |  |||||||| | |||||||| |||||||||||| ||||||  ||||||||||| ||||    
T  23459621 tataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaacatgtcataagctt 23459705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 27123394 - 27123350
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||    
T  27123394 agagcttatggaaataagttgaaaacaacttaaagacatgtcata 27123350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 29778788 - 29778840
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    ||||||||||||  | |||||||| |||| |||||||||||||||||||||||    
T  29778788 tataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataag 29778840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 18011873 - 18011916
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  18011873 taaactgttttcataagctatcttgaagagtttatgaaaataag 18011916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 24169272 - 24169315
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    |||||| | ||||||||| |||||||||||||||||||||||||    
T  24169272 ttttcacaagctatcttggagagcttatgaaaataagttgaaaa 24169315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 256
Target Start/End: Complemental strand, 25548170 - 25548139
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||||||||||||||||||||||||||    
T  25548170 agagcttatgaaaataagttgaaaacaactta 25548139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 29263379 - 29263442
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| || ||||||| || ||||||| ||||||||||||| |||||| |||||    
T  29263379 ttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaacatatcata 29263442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 4212813 - 4212847
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagca 136  Q
    ||||||||||| |||||||||||||||||||||||    
T  4212813 tgtttggataaacaacttattttcagcttatagca 4212847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 10192293 - 10192350
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatg 264  Q
    |||||| | |||||| || |||||| ||||||||||||||||||||||||| |||||||    
T  10192293 ttttcaaaagctatcctggagagct-atgaaaataagttgaaaacaacttacgaacatg 10192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 10206227 - 10206185
Alignment:
Q  208 ttcataggctatcttgaagagcttatgaaaataagttgaaaac 250  Q
    |||||| |||||| ||||||||||||||| |||||||||||||    
T  10206227 ttcataagctatcatgaagagcttatgaagataagttgaaaac 10206185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 16494866 - 16494816
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| ||||||||| ||||||| | ||| ||||||||||||||||||    
T  16494866 ttttcataagctatcttggagagcttgtaaaactaagttgaaaacaactta 16494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 42461281 - 42461327
Alignment:
Q  227 agcttatgaaaataagttgaaaacaacttaagaacatgtcataggct 273  Q
    |||||||||||||||| ||||| ||||||| ||||| ||||||||||    
T  42461281 agcttatgaaaataagctgaaatcaacttatgaacacgtcataggct 42461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 50742897 - 50742835
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| |||||| || ||||||||||||||| |||||||||||   || |||||||||||    
T  50742897 ttttcataagctatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcat 50742835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 24747353 - 24747390
Alignment:
Q  231 tatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  24747353 tatgaaaataagctgaaaacaacttatgaacatgtcat 24747390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 28615526 - 28615575
Alignment:
Q  200 aaactattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||| |||| ||||||||||||| |||||||||| ||||||| ||||||    
T  28615526 aaactgtttttataggctatcttggagagcttatggaaataaggtgaaaa 28615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 40532655 - 40532598
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacat 263  Q
    |||||||| ||| ||||| ||||| || ||||||||| ||||||||||||| ||||||    
T  40532655 ttttcataagctgtcttggagagcctacgaaaataagatgaaaacaacttatgaacat 40532598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 47119024 - 47118979
Alignment:
Q  208 ttcataggctatcttgaagagcttatgaaaataagttgaaaacaac 253  Q
    |||||| ||||||||||||| |||||||| ||||| ||||||||||    
T  47119024 ttcatatgctatcttgaagaacttatgaagataagctgaaaacaac 47118979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 49202637 - 49202710
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    ||||||||| |||  | ||||| || ||||||||| | | || ||||||||||||||||||||||||| |||||    
T  49202637 gtataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaaca 49202710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 1137740 - 1137784
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||  ||||||||||||| ||||||||||||    
T  1137740 agagcttatggaaataaactgaaaacaacttatgaacatgtcata 1137784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 19250566 - 19250618
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| ||| |||||||||||||| || |||| | ||||||||||    
T  19250566 tatcttgaagagcatataaaaataagttgaaatcagcttatggacatgtcata 19250618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 25332766 - 25332834
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttga-agagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||| ||| ||||||| ||| ||||||||   ||| |||||||||||||| |||||||||||||    
T  25332766 gtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaacaactta 25332834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 46247225 - 46247277
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| ||||||||||| ||| |||||||||| ||||||||  |||||||||||    
T  46247225 tatcctgaagagcttaagaatataagttgaagacaacttatcaacatgtcata 46247277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 52746901 - 52746841
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtc 266  Q
    |||||||| ||||||||| |  |||||||||||| || |||||||| |||| |||||||||    
T  52746901 ttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtc 52746841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 53792590 - 53792630
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| |||| ||||||||||||| |||||||||||||    
T  53792590 ctatcttggagagtttatgaaaataagctgaaaacaactta 53792630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 34290228 - 34290313
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    ||||||||| ||| || |||||||| ||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||| ||||    
T  34290228 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatatgtcataagctt 34290313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 26779986 - 26779936
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26779986 ttttcataagctatcttgaagaacttatgaaaataagttgaaaacaactta 26779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 37593744 - 37593682
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcata 37593682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 14630043 - 14629962
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcatagg 271  Q
    |||||||| ||| ||||||||||| ||||||||| |||  ||||| ||||||| ||||||||||||| |||||| |||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaacatatcatagg 14629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 10199469 - 10199406
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||| ||  |||||||||||||||||| ||||||||||||| ||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtcata 10199406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 46252739 - 46252680
Alignment:
Q  210 cataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| ||||||||| |||||||||||||||||  ||||||||||||| ||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaacatgtcata 46252680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 4920838 - 4920768
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||  |||||||||  |||||||||||||||| | |||||||| |||||||||||||||    
T  4920838 taaactatttccataacctatcttgagtagcttatgaaaataagctaaaaacaacctaagaacatgtcata 4920768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 15361048 - 15361106
Alignment:
Q  205 attttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacat 263  Q
    |||||||| ||||||| || |||||||||||||||||| ||||||||||||| ||||||    
T  15361048 attttcattggctatcctggagagcttatgaaaataagctgaaaacaacttatgaacat 15361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 43332476 - 43332538
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    ||||||| ||||| || |||||||| ||||||||||||||||||| |||||||| ||||||||    
T  43332476 gtataagttgtaagctgttttcataagctatcttgaagagcttattaaaataagctgaaaaca 43332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 6279391 - 6279467
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||||||| ||||||||||||||| |||||| |  |||||||||| ||||| | ||||||||||||| | ||||||    
T  6279391 gtataagctttaaactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgt 6279467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 7137076 - 7136996
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| || ||| || |||||||| ||||||||| ||| |||||||||||||| |||||| |||||| ||| ||||||||    
T  7137076 gtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcata 7136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 38867908 - 38867844
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaact 254  Q
    |||||||| |||||| |||||||| | ||||||||||| |||||||||||||| | |||||||||    
T  38867908 tataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaacaact 38867844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 25479590 - 25479653
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| |  |||||||||||||||||| ||||||||||| | ||||||||||||    
T  25479590 ttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcata 25479653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 273
Target Start/End: Complemental strand, 38503517 - 38503458
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaac-atgtcataggct 273  Q
    ||||||||| ||| |||||||||||||| ||||||||||||| |||| ||||||||||||    
T  38503517 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggct 38503458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 6292499 - 6292565
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||  |||| ||| |||||||||||||||||| |||||||| |||| ||||||||||||    
T  6292499 ctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcata 6292565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 16322858 - 16322908
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||||||| |||||||||||||| ||||||| | |||||||||||    
T  16322858 ttttcataggctattttgaagagcttatggaaataagctaaaaacaactta 16322908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 28689504 - 28689450
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| | |||||||||||||||| ||||||||||||| | ||||||||||    
T  28689504 gctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcata 28689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 31517817 - 31517739
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| ||| || | ||||||  || ||||| |||||||||||||||||| |||||||| |||| |||||||||||    
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcat 31517739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 37842416 - 37842354
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| ||||||||||||| ||||| |||||||| |||||||  |||| |||||||||||    
T  37842416 ttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcat 37842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 268
Target Start/End: Complemental strand, 44032076 - 44031998
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| |||||||||||| || | |||||||||||||||||| |||| || |||||| | |||| | |||||||||    
T  44032076 tataagctataaactattttcttaagttatcttgaagagcttatggaaattagctgaaaatagcttatggacatgtcat 44031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 4700144 - 4700079
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaact 254  Q
    ||||||||| |||||| |||| |||  ||||| || |||||||||||||||||| |||||||||||    
T  4700144 gtataagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 8016276 - 8016329
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||||    
T  8016276 ctatcttggagagcttaggaaaataagctgaaaacaagttatgaacatgtcata 8016329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 5276321 - 5276365
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||    
T  5276321 agagcttaagaaaataacttgaaaacaacttatgaacatgtcata 5276365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 38170736 - 38170688
Alignment:
Q  221 ttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||| ||||| ||| ||||||||||||| ||||||||||||    
T  38170736 ttgaagagcttaggaaaacaagctgaaaacaacttatgaacatgtcata 38170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 43722370 - 43722326
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||    
T  43722370 agagcttataaaaataagctgaaaacaacataagaacatgtcata 43722326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 4576814 - 4576877
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||| ||||| | |||||||||||||| |||| ||||||||  |||||||||||    
T  4576814 ttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcata 4576877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 5887043 - 5886992
Alignment:
Q  218 atcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| ||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  5887043 atcttggagaacttacgaaaataagctgaaaacaacttatgaacatgtcata 5886992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 27140487 - 27140550
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| ||| |||||| || |||||||||| ||||||| ||||||||||||| | ||||||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcata 27140550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 35017585 - 35017648
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||| || || |||||||||| |||||||||||||| |||||| | ||||||||||    
T  35017585 ttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatggacatgtcata 35017648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 269
Target Start/End: Original strand, 35925703 - 35925762
Alignment:
Q  210 cataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| |||||| || |||| ||||| |||||||||||||||| |||| ||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcata 35925762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 4445714 - 4445776
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||||||||| |||  |||| ||||||| ||||||||||||||||||| |||  ||||||||    
T  4445714 ctattttcataagctgacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgt 4445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 4868402 - 4868472
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| ||||| ||  |||| ||||| |||||||| |||||||||||||||||||||   ||||||||||    
T  4868402 taaactgttttcgtaaactattttgaaaagcttatgtaaataagttgaaaacaacttattgacatgtcata 4868472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 7472303 - 7472365
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||| || ||| || ||| |||| ||||||||| |||||||||||||||||| ||||||||    
T  7472303 gtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 11695891 - 11695933
Alignment:
Q  227 agcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||| |||| | ||||||||||    
T  11695891 agcttatgaaaataagttgaaaacagcttatggacatgtcata 11695933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 12564560 - 12564510
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| ||||||||| ||| |||||| ||||||| |||||||||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaactta 12564510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 45855732 - 45855766
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagca 136  Q
    |||||||||||||||||||||| ||||||||||||    
T  45855732 tgtttggataaccaacttatttgcagcttatagca 45855766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 47877139 - 47877181
Alignment:
Q  227 agcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||| ||||||||||||| || |||||||||    
T  47877139 agcttatgaaaataagctgaaaacaacttatgagcatgtcata 47877181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 2294905 - 2294970
Alignment:
Q  191 ataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| ||| |||||||||||  |||||||| ||| |||| ||||||||| |||||||| ||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagctta 2294970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 5047155 - 5047200
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||| |||||| ||||||||||||| ||||||| ||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaaca 5047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 11893653 - 11893604
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| ||||| |||||||| ||||| ||||||| |||||||||||||    
T  11893653 tttcataagctattttgaagagtttatggaaataagctgaaaacaactta 11893604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 26462000 - 26461955
Alignment:
Q  208 ttcataggctatcttgaagagcttatgaaaataagttgaaaacaac 253  Q
    |||||| |||||| || |||||||||||||||||| ||||||||||    
T  26462000 ttcataagctatcctgcagagcttatgaaaataagctgaaaacaac 26461955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 32515520 - 32515439
Alignment:
Q  189 gtataagctgtaaactatt-ttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| ||||  |||||| |||||| || |||||||||  | |||||||||||||||||||   ||||||||||    
T  32515520 gtataagctgtaagctataattcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcata 32515439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 269
Target Start/End: Original strand, 47917275 - 47917308
Alignment:
Q  236 aaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||| ||||||||||||    
T  47917275 aaataagttgaaaacaacttatgaacatgtcata 47917308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 1725211 - 1725183
Alignment:
Q  235 aaaataagttgaaaacaacttaagaacat 263  Q
    |||||||||||||||||||||||||||||    
T  1725211 aaaataagttgaaaacaacttaagaacat 1725183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 9602712 - 9602676
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||| |||||| |||||||||||||||||||||||    
T  9602712 gctatcctgaagaacttatgaaaataagttgaaaaca 9602676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 19092435 - 19092399
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  19092435 gctatcctgaagagcttatgaaaataaggtgaaaaca 19092399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 19389910 - 19389974
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaa-caacttaagaacatgtcata 269  Q
    |||||||| ||||||||| ||||||| |||||||||| | |||| ||||||| |||||| |||||    
T  19389910 ttttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaacatatcata 19389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 27820529 - 27820493
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagcata 138  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  27820529 tgtttggataaacaacttatttgcagcttatagcata 27820493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 29270342 - 29270294
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaact 254  Q
    |||| ||| |||||| |||||| ||||| ||||||||||||||||||||    
T  29270342 tttttataagctatcatgaagaacttatcaaaataagttgaaaacaact 29270294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 30815699 - 30815651
Alignment:
Q  221 ttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| |||||||||||||| ||||||||  ||| ||||||||||||    
T  30815699 ttgaagaacttatgaaaataagctgaaaacattttatgaacatgtcata 30815651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 37811852 - 37811924
Alignment:
Q  197 tgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| || |||||||| || ||| || |||||| ||| ||||||||||||||||  ||| ||||||||||||    
T  37811852 tgtaagctgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcata 37811924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 44422692 - 44422744
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||||| ||| ||||||| ||| |||||| || ||||||||||||||||||    
T  44422692 tataagctataagctatttttataagctatcctggagagcttatgaaaataag 44422744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 52286671 - 52286723
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||||| ||||||||||||||| |  ||||||||||| ||||| |||||||    
T  52286671 tataagctataaactattttcataagtcatcttgaagagtttatggaaataag 52286723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 25596035 - 25596105
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  25596035 taaactcttttcataagctatcttggagagcttatgaaaataagttgaaaacaacttagtaacttgtcata 25596105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 7244683 - 7244752
Alignment:
Q  200 aaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||| ||||||||||||| || |||||||||    
T  7244683 aaactgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcata 7244752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 12792627 - 12792579
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  12792627 ctattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 529384 - 529447
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| |||||||||||||||| |||||||||| |||| |||| |||||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcata 529447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 269
Target Start/End: Complemental strand, 6552365 - 6552290
Alignment:
Q  194 agctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| |||||||||||||||  ||||| || |||| ||||||||||||| |||||||| |||| ||| ||||||||    
T  6552365 agctataaactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatgaatatgtcata 6552290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 7623131 - 7623197
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||||| |||||||||||  ||||||||||||| ||| |||||||||   |||||||||||    
T  7623131 tataagctgtaagctattttcataaactatcttgaagagtttacgaaaataagccaaaaacaactta 7623197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 12110352 - 12110404
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataa 241  Q
    ||||||||| ||| || |||||||| ||||||||||||| |||||||||||||    
T  12110352 gtataagctataagctgttttcataagctatcttgaagaacttatgaaaataa 12110404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 262
Target Start/End: Original strand, 28165084 - 28165156
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| |||||| | || ||| |||||| || |||||||||| |||||||||||||||| |||| |||||    
T  28165084 tataagctataaactgtctttataagctatcatggagagcttatggaaataagttgaaaacagcttatgaaca 28165156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 34441082 - 34441122
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagct 230  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  34441082 tataagctgtaaactattttcataagctattttgaagagct 34441122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 44821951 - 44822018
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| | ||| || |||||||| |||||  || ||| ||||||||||||||||||||||||||||    
T  44821951 gtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaactta 44822018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 45859587 - 45859525
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| ||||| ||||||||||||  ||||||| |||||||||| || ||||||||||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaac-tatgaacatgtcata 45859525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 12792688 - 12792642
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  12792688 ctattttcataagctatcttgaagagcatatggaaataagctgaaaa 12792642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 21247944 - 21247998
Alignment:
Q  216 ctatcttgaagagctta-tgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||| |||||||||| | ||||||||||| ||||||||||||    
T  21247944 ctatcttggagagcttactgaaaataagcttaaaacaacttatgaacatgtcata 21247998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 254
Target Start/End: Original strand, 22204495 - 22204525
Alignment:
Q  224 aagagcttatgaaaataagttgaaaacaact 254  Q
    |||||||||||||||||||||||||||||||    
T  22204495 aagagcttatgaaaataagttgaaaacaact 22204525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 254
Target Start/End: Complemental strand, 22230244 - 22230214
Alignment:
Q  224 aagagcttatgaaaataagttgaaaacaact 254  Q
    |||||||||||||||||||||||||||||||    
T  22230244 aagagcttatgaaaataagttgaaaacaact 22230214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 43250751 - 43250697
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| ||| |||||||||||| ||||  ||||||||||||| ||||||||||||    
T  43250751 gctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtcata 43250697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 48917407 - 48917342
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttg--aaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| |||||||||||||||||| ||  || |||||||  ||||||||||||    
T  48917407 ttttcataagctatcttggagagcttatgaaaataagctggaaacacaacttgtgaacatgtcata 48917342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 24363662 - 24363601
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtca 267  Q
    |||||||| |||||| || |||| ||||| ||||||| ||||||||||||| | ||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtca 24363601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 35267382 - 35267439
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    ||||||| |||||||||  ||||||| |||||||||| || |||||||||||| ||||    
T  35267382 tatcttggagagcttatagaaataagctgaaaacaacctatgaacatgtcataagctt 35267439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 46104380 - 46104327
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    ||||||||| |||||| |||||||| | ||||||||||| ||||||||| ||||    
T  46104380 gtataagctataaactgttttcataagttatcttgaagaacttatgaaactaag 46104327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 9423664 - 9423592
Alignment:
Q  197 tgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| || |||| ||| |||||| || ||||||| |  ||||||| ||||||||||||| ||||||||||||    
T  9423664 tgtaagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcata 9423592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 12792562 - 12792514
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    ||||||||||| |||||||||||||||||||  ||||||| ||| ||||    
T  12792562 ctattttcataagctatcttgaagagcttattgaaataagctgataaca 12792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 25670636 - 25670584
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| ||||||| |||||||||| ||||||||| |||  |||||||||||    
T  25670636 tatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcata 25670584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 29286815 - 29286863
Alignment:
Q  221 ttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| |||||||| ||||||| ||||||||||| | ||||||||||||    
T  29286815 ttgaaaagcttatgtaaataagctgaaaacaactgatgaacatgtcata 29286863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 34035926 - 34035982
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| ||||||||  ||| |||  ||||||||||||||||||||||| |||||    
T  34035926 ttttcataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaaca 34035982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 46082064 - 46082108
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||||| ||||||||||||| |  |||||||||    
T  46082064 agagcttatgaaaataagctgaaaacaacttatggtcatgtcata 46082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 46086456 - 46086492
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataag 242  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  46086456 ttttcataggctatcttgaagagtttatggaaataag 46086492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 47130846 - 47130802
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaac 250  Q
    |||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  47130846 ttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 191 - 269
Target Start/End: Complemental strand, 52440738 - 52440660
Alignment:
Q  191 ataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| ||| |||||||||||   ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  52440738 ataagctataagctattttcataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaacatgtcata 52440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 37273136 - 37273206
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| |||||||| ||||||||| ||| |||||| ||||||||||||||||||||| | ||||||||||    
T  37273136 taaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcata 37273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 39602288 - 39602208
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| | ||| || |||||||| ||||||||  ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  39602288 gtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcata 39602208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 47513671 - 47513725
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||    
T  47513671 gctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcata 47513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 20669181 - 20669246
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcatagg 271  Q
    |||||||| ||||||||| |||||||||| |||||||  ||||||| |||| ||||||||||||||    
T  20669181 ttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcatagg 20669246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 36139897 - 36139950
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  36139897 ctatcttgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcata 36139950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 36887513 - 36887574
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtca 267  Q
    |||||||| || |||||||||| |||||||||||||| |||||||| |||| ||||||||||    
T  36887513 ttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaacatgtca 36887574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 256
Target Start/End: Original strand, 2719463 - 2719527
Alignment:
Q  192 taagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||| |||||| |||||||| ||||||||| ||| |||||||||||||| ||| |||||||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaactta 2719527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 3044301 - 3044257
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  3044301 agagcttatgaaaataagttgaaaacagcttatgaacatgtcata 3044257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 25925770 - 25925814
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  25925770 agagcttatgaaaataagttgaaaacagcttatgaacatgtcata 25925814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 35394559 - 35394503
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| |||||||||||||  |||||||||||||||||||||| |||| |||||    
T  35394559 ttttcataagctatcttgaagaatttatgaaaataagttgaaaacagcttatgaaca 35394503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 54837112 - 54837032
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| ||||||  |||||||||| ||||||||| | ||||||| ||||||||  |||||||| ||| ||||||||||||    
T  54837112 gtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcata 54837032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 33883807 - 33883748
Alignment:
Q  210 cataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| ||||||||  ||| |||||||||||||| ||||||||||||| ||||||||||||    
T  33883807 cataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaacatgtcata 33883748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 52619012 - 52619075
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| | ||||||||||||||||| |||||||||| |||||| | |||| ||||||||||||    
T  52619012 ttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaacatgtcata 52619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 34924602 - 34924552
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaac 253  Q
    ||||||||||| ||||||||  |||||||||||||||||| ||||||||||    
T  34924602 ctattttcataagctatcttagagagcttatgaaaataagctgaaaacaac 34924552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 40665438 - 40665500
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| | ||||||| ||||||||| |||||||| |||||||| |||| |||||||||||    
T  40665438 ttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 42745056 - 42745110
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| || |||||||| ||||||| ||||||||||||| ||||||||||||    
T  42745056 gctatcttcaaaagcttatggaaataagatgaaaacaacttatgaacatgtcata 42745110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 36101587 - 36101640
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| ||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  36101587 ctatcctgaagagcttatgaaaataagctgaaaacagcttgtgaacatgtcata 36101640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 41671320 - 41671369
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  41671320 tttcataagctatcttgaaaaatttatgaaaataagttgaaaacaactta 41671369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 5166343 - 5166395
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| |||||| |||||||||||| |||||||| |||| ||||||||||||    
T  5166343 tatcttcaagagcgtatgaaaataagatgaaaacagcttatgaacatgtcata 5166395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 5391911 - 5391951
Alignment:
Q  229 cttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgtcata 5391951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 45432981 - 45432937
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||| ||||||||||||| ||||||||||||    
T  45432981 agagcttatggaaataagctgaaaacaacttatgaacatgtcata 45432937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 20502129 - 20502066
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| |||||||||||||| |||||| ||||||||| | | | ||||||||||    
T  20502129 ttttcataagctatcctgaagagcttatgagaataagctgaaaacaaatgacggacatgtcata 20502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 24281044 - 24281106
Alignment:
Q  193 aagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||| |||||| || |||||| ||||| || ||||||||||||| ||||||||||||||||||    
T  24281044 aagctataaactgttgtcatag-ctatcatggagagcttatgaaagtaagttgaaaacaactta 24281106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 24785214 - 24785277
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| |  |||||||||| ||||||| | ||||||||||| ||||||||||||    
T  24785214 ttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaacatgtcata 24785277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 266
Target Start/End: Original strand, 29771856 - 29771907
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtc 266  Q
    ||||||||||  |||||||| ||||||||||||||||||||| | |||||||    
T  29771856 gctatcttgagaagcttatggaaataagttgaaaacaacttatggacatgtc 29771907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 34414850 - 34414795
Alignment:
Q  201 aactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||||||  ||||| || |||| ||||||||||||| |||||||||||||    
T  34414850 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 34414795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 38902084 - 38902131
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    ||||||||||||| || |||||||||||||||||||||| || |||||    
T  38902084 gctatcttgaagaactcatgaaaataagttgaaaacaacgtatgaaca 38902131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 46886886 - 46886843
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagcatatgtgctt 145  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||    
T  46886886 tgtttggataaacaacttatttgcagcttatagcataagtgctt 46886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 2825154 - 2825192
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  2825154 tattttcataagctatcttggagagcttatgaaaataag 2825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 134
Target Start/End: Original strand, 5495810 - 5495844
Alignment:
Q  100 cttgtttggataaccaacttattttcagcttatag 134  Q
    |||||||||||||||||||||||| ||||||||||    
T  5495810 cttgtttggataaccaacttatttgcagcttatag 5495844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 23808116 - 23808062
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||| ||||||||||||| ||||||||| ||  ||||||||||||    
T  23808116 gctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcata 23808062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 25170817 - 25170858
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaa 248  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  25170817 ttttcataagctatcttga-gagcttatgaaaataagttgaaa 25170858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 34382951 - 34383001
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| |||||| |||| |||||| ||||||||| |||||||||||||    
T  34382951 ttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaactta 34383001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 43116481 - 43116443
Alignment:
Q  227 agcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  43116481 agcttatgcaaataagttgaaaagaacttaagaacatgt 43116443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 13371127 - 13371176
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctgaaaacaactta 13371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 21367676 - 21367721
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 21367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 26478947 - 26479004
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||| |||||||||| |||||| | |||||  |||||||||||||| |||||||||||    
T  26478947 taaattattttcataagctatcctaaagagtatatgaaaataagttaaaaacaactta 26479004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 36445856 - 36445897
Alignment:
Q  228 gcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
T  36445856 gcttatgaaaataagatgaaaacaactaatgaacatgtcata 36445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 36878819 - 36878774
Alignment:
Q  205 attttcataggctatcttgaagagcttatgaaaataagttgaaaac 250  Q
    ||||||||| ||||||||||||| |||||||||| ||| |||||||    
T  36878819 attttcataagctatcttgaagaacttatgaaaaaaagctgaaaac 36878774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 45541578 - 45541643
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||||| | | ||||||| |||||  |||||||| |||| ||||||||||||    
T  45541578 tattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcata 45541643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 5456741 - 5456777
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagcata 138  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  5456741 tgtttggataactaacttatttgcagcttatagcata 5456777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 16790441 - 16790389
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||| ||||||||| | |||||||||||||||  |||||||| ||||    
T  16790441 tattttcataagctatcttggatagcttatgaaaataaactgaaaacagctta 16790389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 24280723 - 24280763
Alignment:
Q  209 tcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||| |||||| || |||||||||||||||||||||||||    
T  24280723 tcataagctatcatggagagcttatgaaaataagttgaaaa 24280763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 26320163 - 26320107
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| ||| ||||||||| |||| ||||||||  ||||||||||||| |||||    
T  26320163 ttttcataagctctcttgaagaacttacgaaaataaactgaaaacaacttatgaaca 26320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 33965550 - 33965486
Alignment:
Q  206 ttttcataggctatcttgaagagcttat-gaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||||||||||||| ||||| ||| |||||| |||||| |  |||||||||    
T  33965550 ttttcataagctatcttgaagagcttatggaaaaaaagctgaaaataacttatgggcatgtcata 33965486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 134
Target Start/End: Original strand, 34034042 - 34034074
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatag 134  Q
    ||||||||||| |||||||||||||||||||||    
T  34034042 tgtttggataaacaacttattttcagcttatag 34034074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 41724204 - 41724284
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatg-aaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| |||||||  |||||| |  |||||||||  |||||||| ||||||||||||| | ||||||||||    
T  41724204 tataagctataaactgttttcatcagctatccttgagagcttatataaaataagctgaaaacaacttatggacatgtcata 41724284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 31624085 - 31624162
Alignment:
Q  192 taagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| ||| || |||||||||||||||||| |||  |||||||||||||||||||||| |||| ||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcata 31624162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 6647396 - 6647459
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||| ||||||||||||    
T  6647396 ttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcata 6647459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 13908481 - 13908540
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    |||||| ||||||||||||||||||||| |||||||| |||| |||||||||||| ||||    
T  13908481 gctatcatgaagagcttatgaaaataagctgaaaacagcttacgaacatgtcataagctt 13908540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 33887832 - 33887902
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| |||||||| |||||| ||||  ||||||| ||||||||||||||||||||  ||||||||||||    
T  33887832 taaactgttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaacatgtcata 33887902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 4420650 - 4420715
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| || ||||||||| |||||||||| ||||||| |||||||| |||| ||||||||||||    
T  4420650 tattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcata 4420715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 769131 - 769210
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||||| |||||||| |||| ||||| || |||| |||| ||||||||||||| |||| ||||||||||||    
T  769131 gtataagctataaactgttttcataagctaacttgagga-cttaagaaagtaagttgaaaacagcttatgaacatgtcata 769210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 17241314 - 17241254
Alignment:
Q  205 attttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||||||  ||||||||| |||| ||||| ||||||||||||||||||||| ||||||||    
T  17241314 attttcattagctatcttggagagtttatggaaataagttgaaaacaacttatgaacatgt 17241254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 6536972 - 6537019
Alignment:
Q  222 tgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  6536972 tgaagagcttatggaaataagctgaaaacaacttatgaacatgtcata 6537019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 30863255 - 30863318
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| ||||||||||||||  || |||| ||||||||||||| | ||||||||||    
T  30863255 ttttcataggctagcttgaagagcttatagaagtaagctgaaaacaacttatgtacatgtcata 30863318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 9027604 - 9027650
Alignment:
Q  223 gaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||||||| ||||||||||||| | ||||||||||    
T  9027604 gaagagcttatgaaaataagctgaaaacaacttatggacatgtcata 9027650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 31583688 - 31583750
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| ||||||  ||| |||||||| ||||||||||||||||||||| | |||||||||    
T  31583688 ttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggacatgtcat 31583750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 2455817 - 2455862
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||    
T  2455817 tattttcataagctatcttggagagcttatggaaataagttgaaaa 2455862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 3528822 - 3528875
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||||||||||||| ||||||||| ||| | ||||||||||    
T  3528822 ctatcttggagagcttatgaaaataagatgaaaacaagttatggacatgtcata 3528875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 2460193 - 2460149
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||    
T  2460193 agagcttatggaaataagttgaaaacaacttaaagacatgtcata 2460149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 7931768 - 7931724
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||    
T  7931768 agagcttacggaaataagctgaaaacaacttaagaacatgtcata 7931724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 5566254 - 5566179
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||||| |||  ||||||||||  | |||||||||||  |||| ||||||||||||||||||||| | ||||||    
T  5566254 tataagctataagatattttcataatccatcttgaagagagtatggaaataagttgaaaacaacttatggacatgt 5566179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 20368241 - 20368178
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||| ||||| ||| ||||||||||||||||||||  | |||| ||||||||||||    
T  20368241 ttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcata 20368178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 21024204 - 21024283
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||  ||| |||||||||||  ||||| |  ||| ||||||||||||||||||||||||| || ||| ||||||||    
T  21024204 tataagcaataagctattttcatatactatcctcgagaacttatgaaaataagttgaaaacaacatatgaatatgtcata 21024283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 32206065 - 32206015
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||||| | ||||||| |||||||||| | ||||||||||||||||||||    
T  32206065 gctatctcggagagcttgtgaaaataagataaaaacaacttaagaacatgt 32206015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 1497990 - 1498035
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    ||||||||  |||||||| |||||||||||||||||| ||||||||    
T  1497990 ttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 2023426 - 2023397
Alignment:
Q  227 agcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||||||||||||||||||||||||    
T  2023426 agcttatgaaaataagttgaaaacaactta 2023397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 9559594 - 9559553
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  9559594 gctatcttgaataacttatgaaaataagttgaaaacagctta 9559553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 20512704 - 20512655
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctgaaaacaactta 20512655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 27894055 - 27894100
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||| | ||||||||| |||||||||||||||| ||||||||    
T  27894055 ttttcataagatatcttgaaaagcttatgaaaataagctgaaaaca 27894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 34403882 - 34403927
Alignment:
Q  224 aagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||| ||||||| |||||||| |||| ||||||||||||    
T  34403882 aagagcttatggaaataaggtgaaaacaccttatgaacatgtcata 34403927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 9668027 - 9667983
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| |||||||||||||||| |||| | ||||||||||    
T  9668027 agagcttatggaaataagttgaaaacagcttatggacatgtcata 9667983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 20370892 - 20370940
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaact 254  Q
    |||||||| ||||||| | || ||||||||||||||| |||||||||||    
T  20370892 ttttcatatgctatctaggagtgcttatgaaaataagatgaaaacaact 20370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 26694887 - 26694931
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaac 250  Q
    ||||||||  |||||||||||| |||||||||||||| |||||||    
T  26694887 ttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 27909680 - 27909636
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||| ||||||||||||| | ||||||||||    
T  27909680 agagcttatggaaataagctgaaaacaacttatggacatgtcata 27909636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 31812074 - 31812038
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  31812074 ttttcataagctatcttggagagcttatgaaaataag 31812038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 34882466 - 34882426
Alignment:
Q  222 tgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||| ||||||||||||||| |||||||||||| |||||    
T  34882466 tgaagaacttatgaaaataagtggaaaacaacttatgaaca 34882426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 13604910 - 13604847
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  13604910 ttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcata 13604847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 32408669 - 32408590
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||| |||||||  |||| ||||||| | ||||||||||    
T  32408669 tataagctataaactattttcataagctatcctgaagagcttatggaaataagcagaaaccaacttacggacatgtcata 32408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 11707064 - 11707127
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| ||||||| |||||||||| |||||||||||||  |||||||||||    
T  11707064 ttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcata 11707127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 12425563 - 12425630
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||| ||| || |||||| | ||||||||| ||| ||||||||||||||||||||||||||||    
T  12425563 gtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaactta 12425630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 17258944 - 17258881
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||  ||||| ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  17258944 ttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcata 17258881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 33533600 - 33533537
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| | ||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||    
T  33533600 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcata 33533537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 36639531 - 36639594
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||| | ||| ||||||    
T  36639531 ttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatggacacgtcata 36639594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 5284509 - 5284446
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||| | |||| | ||||||||||    
T  5284509 ttttcataggctatcatgaagagctaatgaaaataagctgaaaaaagcttatggacatgtcata 5284446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 18906338 - 18906401
Alignment:
Q  193 aagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||| |||||| |||||||| ||||||||||| |||||||  ||||||| |||||||||||||    
T  18906338 aagctataaactgttttcataagctatcttgaaaagcttatcgaaataagctgaaaacaactta 18906401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 21768258 - 21768195
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| | |||||||||||||||| |||||||||||||||||| | || | ||||||||||    
T  21768258 ttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcata 21768195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 7319076 - 7319019
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||| |||||||| ||||||||| ||| |||||||||||||| ||| |||||||||    
T  7319076 taaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaactta 7319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 4014485 - 4014429
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||| |||| |||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 10272509 - 10272429
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||  | |||||||| || |||||| |||| ||||||||||||| |||||||||||||   ||||||||||    
T  10272509 gtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacagacatgtcata 10272429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 31694541 - 31694577
Alignment:
Q  220 cttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31694541 cttgtagagcttatgaaaataagttgaaaacaactta 31694577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 39594801 - 39594873
Alignment:
Q  191 ataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacat 263  Q
    ||||| ||||| || |||||||| | |||||||  || |||||||||||||| |||||||||||||| |||||    
T  39594801 ataagttgtaagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaacttaataacat 39594873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 8089957 - 8090008
Alignment:
Q  218 atcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||| |||||||| |||| ||| || |||||    
T  8089957 atcttgaagagcttatgaaaataagctgaaaacagcttaggaatatatcata 8090008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 18637098 - 18637039
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaa 248  Q
    ||||||||| ||| ||||||||||  |||||||||||||  ||||||||||||| |||||    
T  18637098 gtataagctataagctattttcattagctatcttgaagatattatgaaaataagctgaaa 18637039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 33234354 - 33234433
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||| |||||||| || | |||  ||||||||||||| |||| |||||||||||| ||| ||| ||||||||    
T  33234354 tataagctataagctattttcgtaagttatgctgaagagcttatgtaaatgagttgaaaacaagttatgaatatgtcata 33234433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 41957512 - 41957449
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| |  ||| |||||||||||||| ||||||||||||| | ||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcata 41957449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 3520302 - 3520336
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagca 136  Q
    ||||||||||| |||||||||||||||||||||||    
T  3520302 tgtttggataaacaacttattttcagcttatagca 3520336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 12460053 - 12459999
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| ||||||||||||||||||   |||||||| || ||||||||||||    
T  12460053 gctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcata 12459999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 12521546 - 12521600
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| |||||||||||||| ||||||| |||||||| |||| |||||| |||||    
T  12521546 gctattttgaagagcttatggaaataagctgaaaacagcttatgaacatatcata 12521600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 12975340 - 12975405
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||| ||| || | |||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  12975340 tataagctataagctgtgttcataagctatcttggagagcttatggaa-taagttgaaaacaactta 12975405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 13264172 - 13264103
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| | |||||| |||||||||||| |||||||| |||||||| |||| ||| ||| ||||    
T  13264172 taaactattttcacatgctatcatgaagagcttat-aaaataagctgaaaacagcttatgaatatggcata 13264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 35553265 - 35553207
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaa 248  Q
    |||||||| ||||||||||||||| |||||  || |||||||||| ||||||| |||||    
T  35553265 tataagctataaactattttcatacgctattctggagagcttatggaaataagctgaaa 35553207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 2092596 - 2092543
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||| | ||||||||| ||||||||||||||||| | ||||| ||||    
T  2092596 ctatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccata 2092543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Original strand, 7984965 - 7985034
Alignment:
Q  193 aagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    ||||| ||| || |||||||| ||||||||| |||  ||||||||||||| |||||||| |||| |||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaaca 7985034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 10125781 - 10125716
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| | || | || |||||||||||||||||| |||||||| ||||  |||||||||||    
T  10125781 tattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcata 10125716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 254
Target Start/End: Original strand, 10296439 - 10296468
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaact 254  Q
    ||||||||||||||||||||||||||||||    
T  10296439 agagcttatgaaaataagttgaaaacaact 10296468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 10638577 - 10638528
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    ||||||||||||||| | |||||||||||||| | |||||||||| ||||    
T  10638577 agagcttatgaaaatgaattgaaaacaacttatggacatgtcataagctt 10638528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 29281174 - 29281211
Alignment:
Q  232 atgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  29281174 atgaaaataagttgaaaagaacttatgaacatgtcata 29281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 35531165 - 35531198
Alignment:
Q  223 gaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||||||||||||||||||||||| ||||    
T  35531165 gaagagcttatgaaaataagttgaaaacagctta 35531198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 38104917 - 38104868
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| ||||||||  |||||||||| ||||||| |||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaactta 38104868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 39105456 - 39105509
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    ||||||||| ||| || |||||||| ||||||||| ||| ||||||||||||||    
T  39105456 gtataagctataatctgttttcataagctatcttggagaacttatgaaaataag 39105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 2563202 - 2563254
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataa 241  Q
    ||||||||| ||||||||||||| | ||||||||| ||||  |||||||||||    
T  2563202 gtataagctataaactattttcacaagctatcttggagagtctatgaaaataa 2563254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 2568650 - 2568730
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||  | |||||||| |||||| || |||||| ||||||||||| | |||| |||||| ||| ||||||||    
T  2568650 gtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcata 2568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 9202809 - 9202753
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| | ||||||||||| |||||||||||||| || ||||| |||| |||||    
T  9202809 ttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaaca 9202753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 12242771 - 12242723
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaact 254  Q
    |||||||| ||||||||| |||||||||| || |||| |||||||||||    
T  12242771 ttttcataagctatcttggagagcttatggaagtaagctgaaaacaact 12242723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 16863816 - 16863848
Alignment:
Q  233 tgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||||||| ||||||||||||||||||||||    
T  16863816 tgaaaataagctgaaaacaacttaagaacatgt 16863848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 38829695 - 38829663
Alignment:
Q  208 ttcataggctatcttgaagagcttatgaaaata 240  Q
    |||||| ||||||||||||||||||||||||||    
T  38829695 ttcataagctatcttgaagagcttatgaaaata 38829663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 41052870 - 41052942
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcatagg 271  Q
    |||||| ||||||||  |||| ||| |||||||||| ||||||||| |||| |  ||| ||||||||||||||    
T  41052870 taaactgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcatagg 41052942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 35379077 - 35379015
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| |||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcat 35379015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 680495 - 680575
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| ||| ||||||||||| ||||||||||||| ||| |||||||||| ||||||||  |||  |||||||||||    
T  680495 gtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcata 680575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 8017427 - 8017506
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||| |||||||| ||||||||| ||| |||||||||||| |  |||||||| ||| |||||| |||||    
T  8017427 tataagctgtaaactgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatcata 8017506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 16867748 - 16867811
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| | ||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||    
T  16867748 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcata 16867811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 34652097 - 34652034
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||| |||| | ||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcata 34652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 44443327 - 44443393
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||| ||||||||  ||||| |||||||||||| ||||||||||||| |||||| |||||    
T  44443327 ctattttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttcata 44443393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 656855 - 656788
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||||||  |  ||||||| ||||||||| |||||||||||||||||| ||||||| |||||    
T  656855 gtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataagatgaaaactactta 656788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 12313230 - 12313171
Alignment:
Q  210 cataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| ||||||||| |||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  12313230 cataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcata 12313171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 43985064 - 43985021
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  43985064 ttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 7928362 - 7928304
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||| | ||||||||||| ||| |||||||||||||| ||||||||||||| |||||    
T  7928362 tatttttacaggctatcttggagaacttatgaaaataagctgaaaacaacttatgaaca 7928304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 42817444 - 42817379
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatg 264  Q
    |||||| |||||||| |||||  ||||||||||||| || |||| | |||||||||||||||||||    
T  42817444 taaactgttttcataagctattctgaagagcttatggaagtaagctaaaaacaacttaagaacatg 42817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 1939398 - 1939330
Alignment:
Q  201 aactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||| |||||||| |||||  || |||||||||| |||||||||||||||| |||| | ||||||||||    
T  1939398 aactgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcata 1939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 40682455 - 40682400
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| | |||||||| || |||||||||||||||||||||||||||| |||||    
T  40682455 ttttcataagatatcttga-gaacttatgaaaataagttgaaaacaacttatgaaca 40682400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 41817168 - 41817240
Alignment:
Q  197 tgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| |||||||||||  ||||| || |||||||||| ||||||| ||||||||| |||  |||||||||||    
T  41817168 tgtaagctattttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcata 41817240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 1056430 - 1056371
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||| |||||| ||||||||||| |||||||||||||| ||||  ||||||| ||||||    
T  1056430 tataacctgtaagctattttcataagctatcttgaagagtttatagaaataagctgaaaa 1056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 242
Target Start/End: Complemental strand, 3067447 - 3067404
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    |||||| |||||||| |||||||||||||| |||||||||||||    
T  3067447 taaactgttttcataagctatcttgaagagtttatgaaaataag 3067404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 9556235 - 9556310
Alignment:
Q  193 aagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    ||||| |||||| |||||||| |||||| |  | |||||||||||||||||||||| | ||||| | |||||||||    
T  9556235 aagctataaactgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcat 9556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 10563619 - 10563552
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggct 273  Q
    |||||||| |||||  ||||||||||| ||||||||| |||||| | |||| | ||||||||||||||    
T  10563619 ttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatggacatgtcataggct 10563552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 29316836 - 29316773
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||  ||||||||| ||| |||||| ||||||| |||||| |||||| ||||||||||||    
T  29316836 ttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaacatgtcata 29316773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 33941918 - 33941981
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||||||||| |||| |||||| |||||||||||| || |||| |||| |||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcata 33941981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 36863686 - 36863647
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttg 245  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  36863686 ttttcataagctatcttggagagcttatgaaaataagttg 36863647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 43911060 - 43910997
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| | ||||||||| | ||||| ||| |||||| ||||||||||||| ||||||||||||    
T  43911060 ttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaacatgtcata 43910997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 2416194 - 2416228
Alignment:
Q  102 tgtttggataaccaacttattttcagcttatagca 136  Q
    ||||||||||| |||||||||||||||||||||||    
T  2416194 tgtttggataaacaacttattttcagcttatagca 2416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 9530791 - 9530725
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcatag 270  Q
    |||||||||| |||||| || ||||||||||||| |||| | |||| |||||| | |||||||||||    
T  9530791 tattttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatggacatgtcatag 9530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 13234536 - 13234578
Alignment:
Q  227 agcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||||||||||||||| | ||||||||||    
T  13234536 agcttatgaagataagttgaaaacaacttatggacatgtcata 13234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 31096311 - 31096369
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||| |||||||||| |||| |||||||||||||||| |||||| |||| | ||||||    
T  31096311 tttcacaggctatctttaagaacttatgaaaataagtttaaaacagcttatggacatgt 31096369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 38078471 - 38078413
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatg 264  Q
    |||||||| ||||||||| |||||||||| |||| || | ||||||||||| |||||||    
T  38078471 ttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacatg 38078413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 44644297 - 44644342
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaa--aacaacttaaga 259  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  44644297 ctatcttgaagagcttatgaaaataagctgaatcaacaacttaaga 44644342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 12464682 - 12464723
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||||||||| |||||||||||||| ||| |||||||||    
T  12464682 gctatcttgaagaacttatgaaaataagctgagaacaactta 12464723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 14666579 - 14666620
Alignment:
Q  228 gcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||| |||||||||| || ||||||||||||    
T  14666579 gcttatgaaaataaggtgaaaacaacctatgaacatgtcata 14666620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 25790145 - 25790194
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||| || |||||||||||||||||||| |||||| |||| ||||||||    
T  25790145 ctatcctggagagcttatgaaaataagttcaaaacagcttaggaacatgt 25790194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 26372797 - 26372748
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| | ||||||| |||| || ||||||||||||||||||||||||    
T  26372797 tttcataagttatcttggagaggttgtgaaaataagttgaaaacaactta 26372748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 40279416 - 40279461
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||| ||||| ||| ||| |||||||||||||||||||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaaca 40279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 41875731 - 41875678
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataag 242  Q
    ||||||||||||| || |||||||| |||||||||  ||||||| |||||||||    
T  41875731 gtataagctgtaagctgttttcataagctatcttggtgagcttaagaaaataag 41875678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 42419989 - 42420074
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctt 274  Q
    |||||| || ||| ||||||||||| |||||| || | |||||||| |||| || ||||||||| ||| ||||||| |||| ||||    
T  42419989 gtataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataagctt 42420074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 43199841 - 43199784
Alignment:
Q  210 cataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtca 267  Q
    |||| ||||||||| || |||||||||| |||| |||||||||||||  |||||||||    
T  43199841 cataagctatcttggagggcttatgaaattaagctgaaaacaacttataaacatgtca 43199784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 1056171 - 1056127
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||| ||| ||||||||||| | ||||||||||||    
T  1056171 agagcttatgaaaacaagctgaaaacaactaatgaacatgtcata 1056127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 9174824 - 9174880
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    |||||||| ||||||||  |||||||||||||||||| |||||| | |||| |||||    
T  9174824 ttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaaca 9174880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 249
Target Start/End: Complemental strand, 12464551 - 12464491
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||| ||| ||| ||||||||||| ||||||||| ||| ||| |||||||||| ||||||    
T  12464551 gtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 11494148 - 11494197
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaa 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  11494148 taaactattttcataagctatcttgaagagcttatgaaaataagctgaaa 11494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 42215145 - 42215084
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||| ||||||||    
T  42215145 tattttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaacatgt 42215084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 11493971 - 11494033
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    ||||||||||| ||||||||||||||||||||||| |||| |||| ||| |||| ||||||||    
T  11493971 ctattttcatacgctatcttgaagagcttatgaaagtaagctgaacacagcttatgaacatgt 11494033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 20672753 - 20672822
Alignment:
Q  200 aaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| |||| ||| |||||| || |||||||||||||||||| |||||||| |||| ||||||||||||    
T  20672753 aaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcata 20672822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 25869328 - 25869264
Alignment:
Q  205 attttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||| || |||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatggacatgtcata 25869264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 42215384 - 42215304
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| || ||| ||||||||||| |||||| || |||||||||| ||||||| |||||||| |||| ||||| ||||||    
T  42215384 gtataatctataacctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatgaacaagtcata 42215304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 44236884 - 44236824
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtc 266  Q
    |||||||| ||||| ||| |||||||||||||||||| |||||| ||||||||| ||||||    
T  44236884 ttttcataagctatattggagagcttatgaaaataagctgaaaataacttaagagcatgtc 44236824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 4762518 - 4762564
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaa 252  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  4762518 ttttcataagctatcttgaagagcttatgtaaataagctgaaaacaa 4762564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 3600777 - 3600736
Alignment:
Q  228 gcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  3600777 gcttatgaaaataagttgaaaacaacttatggacatgtcata 3600736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 14339644 - 14339603
Alignment:
Q  228 gcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  14339644 gcttatgaaaataagttgaaaacaacttatggacatgtcata 14339603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 249
Target Start/End: Original strand, 27028823 - 27028883
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||| ||| ||| || |||||||| ||||||||| |||||||||||||||||| ||||||    
T  27028823 gtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 33714300 - 33714236
Alignment:
Q  203 ctattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtca 267  Q
    ||||||||||| ||||||| | ||||||||| |||||||| |||||||| |||| ||||| ||||    
T  33714300 ctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaacaagtca 33714236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 37822708 - 37822657
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  37822708 tatcttgaagagcttatgaaaataag-tgaaaacaacttacaaacatatcata 37822657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 1433557 - 1433600
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    |||||||| |||||| || |||||||||||||||||||||||||    
T  1433557 ttttcataagctatcctggagagcttatgaaaataagttgaaaa 1433600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 4281579 - 4281618
Alignment:
Q  230 ttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  4281579 ttatgaaaataagatgaaaacaacttatgaacatgtcata 4281618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 11569518 - 11569455
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||| || |||| || |||||||||| ||||||||||||| | ||||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcata 11569455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 28769416 - 28769337
Alignment:
Q  190 tataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| ||| || |||||||| ||||| ||| |||| ||||| ||||||| ||||||||||||| | |||| |||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggacatatcata 28769337  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 268
Target Start/End: Original strand, 30389131 - 30389170
Alignment:
Q  229 cttatgaaaataagttgaaaacaacttaagaacatgtcat 268  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  30389131 cttatgaaaataagctgaaaacaacttatgaacatgtcat 30389170  T

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Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 33553249 - 33553312
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||| |||||||||||||||||||| ||||||| ||  |||| |||| | ||||||||||    
T  33553249 ttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcata 33553312  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 779129 - 779059
Alignment:
Q  199 taaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||| ||||||||  |||||||| ||||  ||  |||||||| ||||||||||||| ||||||||||||    
T  779129 taaactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcata 779059  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 11185239 - 11185289
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgt 265  Q
    |||||| || |||||| ||| ||||||||||||||||||||| ||||||||    
T  11185239 gctatcatggagagctgatggaaataagttgaaaacaacttatgaacatgt 11185289  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 21653099 - 21653153
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||||| |||||||||||||||||| |||||| | |||| |||| |||||||    
T  21653099 gctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgtcata 21653153  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 6875330 - 6875285
Alignment:
Q  204 tattttcataggctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    |||||||||| ||||||||| |||||||| | ||||||||||||||    
T  6875330 tattttcatatgctatcttggagagcttaaggaaataagttgaaaa 6875285  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 7714251 - 7714296
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaaca 251  Q
    |||||||  ||||||||| |||||| ||||||||||||||||||||    
T  7714251 ttttcatgagctatcttggagagctcatgaaaataagttgaaaaca 7714296  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 31875646 - 31875613
Alignment:
Q  216 ctatcttgaagagcttatgaaaataagttgaaaa 249  Q
    ||||||| ||||||||||||||||||||||||||    
T  31875646 ctatcttcaagagcttatgaaaataagttgaaaa 31875613  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 256
Target Start/End: Complemental strand, 39866786 - 39866745
Alignment:
Q  215 gctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    |||||||||||||||||||||||||||  |||||||| ||||    
T  39866786 gctatcttgaagagcttatgaaaataaactgaaaacagctta 39866745  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 2595035 - 2594995
Alignment:
Q  229 cttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| |||||| ||||||||||||| ||||||||||||    
T  2595035 cttatgagaataagctgaaaacaacttatgaacatgtcata 2594995  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Original strand, 7039835 - 7039867
Alignment:
Q  222 tgaagagcttatgaaaataagttgaaaacaact 254  Q
    ||||||||||||| |||||||||||||||||||    
T  7039835 tgaagagcttatggaaataagttgaaaacaact 7039867  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 9700029 - 9700073
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||||||||||| |||||||| |||| | ||||||||||    
T  9700029 agagcttatgaaaataaggtgaaaacagcttatggacatgtcata 9700073  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 9956875 - 9956819
Alignment:
Q  206 ttttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaaca 262  Q
    ||||||||  |||||||| ||| |||||||||||||| ||||||| ||||| |||||    
T  9956875 ttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaaca 9956819  T

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Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 12132865 - 12132893
Alignment:
Q  227 agcttatgaaaataagttgaaaacaactt 255  Q
    |||||||||||||||||||||||||||||    
T  12132865 agcttatgaaaataagttgaaaacaactt 12132893  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Original strand, 12558996 - 12559040
Alignment:
Q  217 tatcttgaagagcttatgaaaataagttgaaaacaacttaagaac 261  Q
    ||||||| | |||||||||||||||||| ||||||||||| ||||    
T  12558996 tatcttggatagcttatgaaaataagttaaaaacaacttatgaac 12559040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 14956496 - 14956460
Alignment:
Q  100 cttgtttggataaccaacttattttcagcttatagca 136  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  14956496 cttgtttggataaacaacttatttgcagcttatagca 14956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 28784865 - 28784794
Alignment:
Q  197 tgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||| ||||||||||| ||||||||  ||||||| | |||||||| |||||| | |||| ||||||||||||    
T  28784865 tgtaagctattttcataagctatcttagagagcttgtaaaaataagctgaaaa-agcttatgaacatgtcata 28784794  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 38421256 - 38421336
Alignment:
Q  189 gtataagctgtaaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    ||||||| |||||  | |||||| | ||||||||||||| ||| || || |||| ||||||||||||| | ||||||||||    
T  38421256 gtataagttgtaagttgttttcaaaagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatggacatgtcata 38421336  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 41606945 - 41606901
Alignment:
Q  225 agagcttatgaaaataagttgaaaacaacttaagaacatgtcata 269  Q
    |||||||||| ||||||| ||||||||||||  ||||||||||||    
T  41606945 agagcttatggaaataagctgaaaacaacttttgaacatgtcata 41606901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 33687 - 33638
Alignment:
Q  207 tttcataggctatcttgaagagcttatgaaaataagttgaaaacaactta 256  Q
    ||||||| |||||  ||||||||||||| ||||||| |||||||||||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctgaaaacaactta 33638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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