View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3963_low_48 (Length: 251)
Name: NF3963_low_48
Description: NF3963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3963_low_48 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 42410186 - 42409944
Alignment:
| Q |
9 |
gagaagaacctctgaaatcaaacccactcttcccaggcattgtagtctcggctacaaagtaaggctgcaaagacaatcaagtcaacaagctggatgagat |
108 |
Q |
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| T |
42410186 |
gagaagaacctctgaaatcaaacccactcttcccaggcattgtagtctcggctacaaagtaaggctgcaaagacaatcaagtcaacaagctggatgagat |
42410087 |
T |
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| Q |
109 |
tgctagaaactaactggtattattacaaaatataggaataaattttctcgattacaaacagcaacacaactttgagggtctttccacatccaaatgtgcc |
208 |
Q |
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| T |
42410086 |
tgctagaaactaactggtattattacaaaatataggaataaattttctcgattacaaacagcaacacaactttgagggtctttccacatccaaatgtgcc |
42409987 |
T |
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| Q |
209 |
aaaagaccctaaataacttcaataagaacacaatcccctctct |
251 |
Q |
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||||||||||||||||||||||||||||||| ||| ||||||| |
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| T |
42409986 |
aaaagaccctaaataacttcaataagaacacgatctcctctct |
42409944 |
T |
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