View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3965_high_15 (Length: 240)
Name: NF3965_high_15
Description: NF3965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3965_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 8548394 - 8548193
Alignment:
| Q |
1 |
tcaatatgagtgagataaaggaagaaaattaatattacaatgtattgcaggaaccaattttaataatatttacaaggactaaaataagacaannnnnnna |
100 |
Q |
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| T |
8548394 |
tcaatatgagtgagataaaggaagaaaattaatattacaatgtattgcaggaaccaatttttataatatttacaaggactaaaataagacaattttttta |
8548295 |
T |
|
| Q |
101 |
tagactaaaaacagaaaatgtttatatttgtaggatccaaatgtatatttaaacctctttttaatctataaaagcatgagcattaaccaactggttgtgc |
200 |
Q |
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| T |
8548294 |
tagactaaaaacagaaaatgtttatatttgtaggatccaaatgtatatttaaacctctatttaatctataaaagcatgagcattaaccaactggttgtgc |
8548195 |
T |
|
| Q |
201 |
tc |
202 |
Q |
| |
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|| |
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|
| T |
8548194 |
tc |
8548193 |
T |
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