View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3966_low_7 (Length: 235)

Name: NF3966_low_7
Description: NF3966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3966_low_7
NF3966_low_7
[»] chr1 (21 HSPs)
chr1 (63-235)||(8137894-8138066)
chr1 (138-235)||(19798981-19799078)
chr1 (138-235)||(33301148-33301245)
chr1 (138-235)||(16035638-16035735)
chr1 (143-235)||(16649581-16649673)
chr1 (138-235)||(10135486-10135583)
chr1 (146-235)||(38620730-38620819)
chr1 (138-235)||(47455354-47455451)
chr1 (138-234)||(47451194-47451290)
chr1 (171-235)||(25843819-25843883)
chr1 (139-206)||(18784546-18784613)
chr1 (159-233)||(28434544-28434618)
chr1 (138-235)||(26927690-26927787)
chr1 (138-235)||(39588335-39588432)
chr1 (138-235)||(51041431-51041527)
chr1 (150-210)||(8900296-8900356)
chr1 (159-235)||(10140140-10140216)
chr1 (155-235)||(11806406-11806486)
chr1 (138-235)||(12260026-12260123)
chr1 (138-235)||(23192786-23192882)
chr1 (138-218)||(5346693-5346773)
[»] chr7 (22 HSPs)
chr7 (138-234)||(8076080-8076176)
chr7 (138-235)||(23866098-23866195)
chr7 (138-235)||(4579538-4579635)
chr7 (138-231)||(12254109-12254202)
chr7 (138-235)||(44510645-44510742)
chr7 (138-233)||(6590953-6591048)
chr7 (159-235)||(12799461-12799537)
chr7 (138-234)||(23246902-23246998)
chr7 (139-233)||(26341230-26341324)
chr7 (138-235)||(8268323-8268420)
chr7 (138-235)||(44423105-44423202)
chr7 (138-235)||(4930263-4930360)
chr7 (138-235)||(25543330-25543427)
chr7 (138-206)||(9650964-9651032)
chr7 (169-235)||(26287113-26287179)
chr7 (178-235)||(42626559-42626616)
chr7 (172-235)||(30258164-30258227)
chr7 (155-220)||(13142884-13142949)
chr7 (159-235)||(9008214-9008290)
chr7 (159-218)||(29150985-29151044)
chr7 (138-235)||(13314204-13314301)
chr7 (138-235)||(21671225-21671322)
[»] chr5 (30 HSPs)
chr5 (138-233)||(7451788-7451883)
chr5 (138-235)||(32461517-32461614)
chr5 (138-235)||(41587128-41587225)
chr5 (138-235)||(39523079-39523176)
chr5 (138-234)||(42001464-42001560)
chr5 (138-235)||(12045107-12045204)
chr5 (138-235)||(12501867-12501964)
chr5 (138-231)||(35679847-35679940)
chr5 (138-234)||(41996695-41996791)
chr5 (138-235)||(556725-556822)
chr5 (138-235)||(561497-561594)
chr5 (138-235)||(3665962-3666059)
chr5 (138-235)||(6514569-6514666)
chr5 (138-231)||(10759792-10759885)
chr5 (138-235)||(20181031-20181128)
chr5 (138-235)||(26667302-26667399)
chr5 (138-235)||(26938899-26938996)
chr5 (138-235)||(39518440-39518537)
chr5 (138-210)||(40147925-40147997)
chr5 (138-235)||(6155387-6155484)
chr5 (138-235)||(12103055-12103152)
chr5 (138-235)||(29167941-29168038)
chr5 (138-235)||(36937479-36937576)
chr5 (138-235)||(36942233-36942330)
chr5 (139-228)||(37248770-37248859)
chr5 (159-235)||(36428760-36428836)
chr5 (138-235)||(12041900-12041997)
chr5 (138-201)||(37652832-37652895)
chr5 (138-235)||(16116217-16116314)
chr5 (148-201)||(37550034-37550087)
[»] scaffold0352 (1 HSPs)
scaffold0352 (138-235)||(7134-7231)
[»] chr8 (21 HSPs)
chr8 (138-235)||(31449834-31449931)
chr8 (138-235)||(18876335-18876432)
chr8 (138-235)||(23548600-23548697)
chr8 (138-231)||(33416577-33416670)
chr8 (138-235)||(36683609-36683706)
chr8 (138-235)||(2965660-2965757)
chr8 (138-235)||(15875636-15875733)
chr8 (138-235)||(19166664-19166761)
chr8 (138-231)||(44925895-44925988)
chr8 (159-235)||(1910937-1911013)
chr8 (138-235)||(40125853-40125950)
chr8 (139-235)||(12820370-12820466)
chr8 (159-235)||(38182205-38182281)
chr8 (138-231)||(1807502-1807596)
chr8 (138-235)||(17025965-17026062)
chr8 (138-235)||(17556457-17556554)
chr8 (138-231)||(28559626-28559719)
chr8 (138-235)||(17953840-17953938)
chr8 (138-231)||(24090657-24090750)
chr8 (138-235)||(34118496-34118593)
chr8 (138-201)||(43302720-43302784)
[»] chr3 (34 HSPs)
chr3 (138-235)||(7571186-7571283)
chr3 (138-235)||(8883198-8883295)
chr3 (138-235)||(8069708-8069804)
chr3 (138-235)||(55431343-55431440)
chr3 (138-235)||(39775696-39775793)
chr3 (140-235)||(18472037-18472132)
chr3 (138-235)||(758336-758433)
chr3 (138-235)||(3657208-3657305)
chr3 (138-231)||(23666095-23666188)
chr3 (138-231)||(24038343-24038436)
chr3 (138-235)||(32474648-32474745)
chr3 (138-230)||(12112614-12112706)
chr3 (138-234)||(20520082-20520178)
chr3 (150-233)||(8887970-8888053)
chr3 (140-231)||(23661436-23661527)
chr3 (138-233)||(49971394-49971489)
chr3 (138-235)||(3672614-3672711)
chr3 (138-235)||(3692646-3692743)
chr3 (138-235)||(14438663-14438760)
chr3 (138-235)||(29350268-29350365)
chr3 (139-234)||(28125145-28125242)
chr3 (138-235)||(3033672-3033769)
chr3 (138-231)||(3419023-3419116)
chr3 (138-235)||(18467253-18467350)
chr3 (170-235)||(27708996-27709061)
chr3 (138-231)||(29715672-29715765)
chr3 (159-231)||(12965845-12965917)
chr3 (151-235)||(17026074-17026157)
chr3 (143-235)||(19276888-19276980)
chr3 (138-235)||(12971601-12971698)
chr3 (187-231)||(55325853-55325897)
chr3 (172-235)||(6596325-6596388)
chr3 (159-205)||(16013759-16013805)
chr3 (203-235)||(25726756-25726788)
[»] chr2 (26 HSPs)
chr2 (138-235)||(29677411-29677508)
chr2 (138-231)||(1934965-1935058)
chr2 (138-231)||(10160696-10160789)
chr2 (138-235)||(19892434-19892531)
chr2 (138-235)||(9180692-9180789)
chr2 (138-235)||(9189771-9189868)
chr2 (138-235)||(12796955-12797052)
chr2 (138-235)||(35638965-35639062)
chr2 (138-235)||(42926727-42926824)
chr2 (138-234)||(21523689-21523785)
chr2 (159-231)||(25497297-25497369)
chr2 (159-235)||(30658314-30658390)
chr2 (138-235)||(30650959-30651056)
chr2 (138-235)||(35601952-35602049)
chr2 (159-235)||(29677818-29677894)
chr2 (153-231)||(19578386-19578464)
chr2 (138-235)||(18344461-18344558)
chr2 (138-235)||(28603328-28603430)
chr2 (159-235)||(31326790-31326866)
chr2 (138-201)||(7737853-7737916)
chr2 (138-233)||(40847565-40847660)
chr2 (139-201)||(30631610-30631672)
chr2 (138-223)||(25478277-25478362)
chr2 (157-231)||(13291512-13291586)
chr2 (170-231)||(32079441-32079502)
chr2 (155-231)||(17545270-17545346)
[»] scaffold0057 (1 HSPs)
scaffold0057 (138-235)||(35664-35761)
[»] chr6 (20 HSPs)
chr6 (138-235)||(33687571-33687668)
chr6 (138-235)||(17964527-17964624)
chr6 (138-235)||(21309061-21309158)
chr6 (138-233)||(6407830-6407925)
chr6 (138-233)||(11570719-11570814)
chr6 (159-233)||(12689022-12689096)
chr6 (138-235)||(24589132-24589229)
chr6 (138-235)||(2700074-2700171)
chr6 (138-227)||(16836132-16836221)
chr6 (150-235)||(20748252-20748337)
chr6 (159-231)||(11614064-11614136)
chr6 (138-235)||(12406321-12406418)
chr6 (138-231)||(29892233-29892326)
chr6 (159-235)||(4157337-4157413)
chr6 (159-235)||(8747833-8747909)
chr6 (138-235)||(13736646-13736743)
chr6 (138-235)||(14509014-14509111)
chr6 (138-235)||(22695239-22695336)
chr6 (187-235)||(11534679-11534727)
chr6 (187-235)||(11560189-11560237)
[»] chr4 (31 HSPs)
chr4 (138-235)||(31269064-31269161)
chr4 (138-235)||(31273551-31273648)
chr4 (138-235)||(55251749-55251846)
chr4 (139-235)||(16421060-16421156)
chr4 (139-235)||(32082059-32082154)
chr4 (159-235)||(37259845-37259921)
chr4 (138-235)||(13059440-13059537)
chr4 (138-235)||(37264532-37264629)
chr4 (155-235)||(4551044-4551124)
chr4 (159-235)||(19102028-19102104)
chr4 (139-235)||(19541129-19541225)
chr4 (138-220)||(5271402-5271484)
chr4 (138-220)||(31765916-31765998)
chr4 (140-233)||(12874571-12874664)
chr4 (138-235)||(31729355-31729452)
chr4 (159-235)||(8693762-8693838)
chr4 (138-206)||(13521989-13522057)
chr4 (159-235)||(47574676-47574752)
chr4 (159-231)||(51697968-51698040)
chr4 (172-235)||(48276617-48276680)
chr4 (165-235)||(47244305-47244375)
chr4 (138-235)||(8030444-8030541)
chr4 (138-235)||(33463324-33463421)
chr4 (138-235)||(42758723-42758820)
chr4 (139-206)||(12823892-12823959)
chr4 (170-233)||(16948063-16948126)
chr4 (150-220)||(19906293-19906363)
chr4 (138-235)||(33468941-33469038)
chr4 (138-218)||(2819874-2819954)
chr4 (159-235)||(5928187-5928263)
chr4 (159-235)||(12878290-12878366)
[»] scaffold0008 (1 HSPs)
scaffold0008 (136-235)||(255845-255944)
[»] scaffold2020 (1 HSPs)
scaffold2020 (138-223)||(401-486)
[»] scaffold0045 (1 HSPs)
scaffold0045 (162-235)||(83120-83193)
[»] scaffold0009 (1 HSPs)
scaffold0009 (138-223)||(165009-165094)
[»] scaffold0182 (1 HSPs)
scaffold0182 (138-235)||(9855-9952)
[»] scaffold0012 (1 HSPs)
scaffold0012 (138-235)||(166054-166151)
[»] scaffold0002 (2 HSPs)
scaffold0002 (139-235)||(4105-4201)
scaffold0002 (138-231)||(443917-444008)
[»] scaffold0054 (2 HSPs)
scaffold0054 (154-233)||(25445-25524)
scaffold0054 (161-235)||(29209-29282)
[»] scaffold0128 (1 HSPs)
scaffold0128 (170-233)||(13334-13397)
[»] scaffold1050 (1 HSPs)
scaffold1050 (162-235)||(1194-1267)
[»] scaffold0011 (1 HSPs)
scaffold0011 (177-235)||(155486-155544)
[»] scaffold0184 (1 HSPs)
scaffold0184 (138-235)||(2339-2435)


Alignment Details
Target: chr1 (Bit Score: 121; Significance: 4e-62; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 63 - 235
Target Start/End: Original strand, 8137894 - 8138066
Alignment:
Q  63 caaattattgtatttgaattcccaaattctagagaatatctcacgaagttgttactagagtcacgactaggttaggtttcgtggcattgtctaaagttgt 162  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  8137894 caaattattgtatttgaattcccaaattctaaagaatatctaccgaagttgttactagagtcgcgactaggttaagtttcgtggcattgcctaaagttgt 8137993  T
Q  163 gcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| |||||||||||||||   ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  8137994 gcaaggcagactatcaaccatatcgcctccaggataaaacaagctcagctacaactgtgcggttaactactgc 8138066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 19799078 - 19798981
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| | || ||| |||||||||||||||||||||||| || ||||||||||||||| |||  ||| ||||||||||||||||||||||||    
T  19799078 gtttcgtggcactatccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgc 19798981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 33301245 - 33301148
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| || ||||  ||||||||||||||||||||||||    
T  33301245 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaatttcatctacaactgtgcggttaactactgc 33301148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 16035638 - 16035735
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||  ||||| |||| |||||||||||||    
T  16035638 gtttcgtggcactgtccaaagttgtgcaagacagattatcaaccacgccgcctccaggataaaacaagctcatctacaaatgtgtggttaactactgc 16035735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 16649673 - 16649581
Alignment:
Q  143 gtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||| |||| ||| |||||||||| ||||||||||||| || |||||| |||||||| |||| ||| |||||||||| |||||||||||||    
T  16649673 gtggcactgtccaaaattgtgcaagatagactatcaaccacgccgcctccgggataaaacaagtccagctacaactgtgtggttaactactgc 16649581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 10135486 - 10135583
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |  ||||| ||||||||| ||||| |||||||| || ||||| ||||||||| |||  ||||| ||||||||||||||||||||||    
T  10135486 gtttcgtggcactacctaaaattgtgcaaggcagacaatcaaccacgccgcctctaggataaaacaagcccagttgcaactgtgcggttaactactgc 10135583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 38620730 - 38620819
Alignment:
Q  146 gcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| ||| ||||||||| |||||||||||| | || ||||||| ||||||| |||| ||  ||||||||||||||||||||||||    
T  38620730 gcattgtccaaaattgtgcaaggcagactatcaactacgccgcctccaagataaaacaagtccaactacaactgtgcggttaactactgc 38620819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 47455451 - 47455354
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| |||||||||||||| ||||||||| || ||||||||||||||| |||   || ||||||||| || |||||||||||    
T  47455451 gtttcgtggcaatgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaagcctagctacaactgttcgattaactactgc 47455354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 47451290 - 47451194
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||| ||||| || | ||| |||||||||||||||||||||||| || ||||||| ||||||| ||| |||  ||||||||| || ||||||||||    
T  47451290 gtttcatggcactgccaaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagctcaactacaactgttcgattaactactg 47451194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 25843819 - 25843883
Alignment:
Q  171 gactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||| || |||||||| |||||| |||  ||| ||||||||||||||||||||||||    
T  25843819 gactatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgc 25843883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 18784613 - 18784546
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagt 206  Q
    |||||||||| || ||||| ||||||||| |||||||||||||| || |||||||| |||||| ||||    
T  18784613 tttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagt 18784546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 28434618 - 28434544
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||||||  |||||||||||||| ||| | ||||||||||||| |||||||  ||||| ||||| ||||||||||    
T  28434618 ttgtgcaccacagactatcaaccttgccgtctccaggataaaacaagttcaactacaattgtgcagttaactact 28434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 26927787 - 26927690
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||| || ||||| |  |||||| |||  ||| ||||||||| |  |||||||||||    
T  26927787 gtttcgtggcattgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaaaataaaacaagcccagctacaactgtacacttaactactgc 26927690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 39588432 - 39588335
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||| ||   ||||||||||||  ||| |||  ||||| ||| || |||||||||||    
T  39588432 gtttcgtggcactgtccaaaattgtgcaagacagactatctaccacgcctactccaggataaagcaagctcatctacaattgttcgattaactactgc 39588335  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 51041527 - 51041431
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||| ||||||| |||  ||| ||||||||| || |||| ||||||    
T  51041527 gtttcgtggcactgcccaaa-ttgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaattactgc 51041431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 8900296 - 8900356
Alignment:
Q  150 tgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcag 210  Q
    ||||||||||||||||| ||| |||||||| ||  | ||||||||||||||| ||||||||    
T  8900296 tgtctaaagttgtgcaaaacatactatcaatcacaccgcctccaggataaaacaagttcag 8900356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 10140140 - 10140216
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| ||||| |||||||| ||  |||| ||||||||| |||  ||| | ||||||||||||||||||||||    
T  10140140 ttgtgcaaggcagacaatcaaccacgccacctctaggataaaacaagcccagctgcaactgtgcggttaactactgc 10140216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 11806406 - 11806486
Alignment:
Q  155 aaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| || |||| |||||||||||||| || |||| ||| |||||| |||||||  ||||| ||||||||||| ||||||    
T  11806406 aaagtggtacaaggcagactatcaaccacgccgccttcagaataaaagaagttcaactacaattgtgcggttaaatactgc 11806486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 12260026 - 12260123
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || || | ||| |||||||||||||||||||||||| || | ||  ||||||||| ||   ||  ||||||| ||||||||||||||||    
T  12260026 gtttcgtgacactgcccaaaattgtgcaagacagactatcaaccacgccgtctttaggataaaacaaacacatgtacaactatgcggttaactactgc 12260123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 23192882 - 23192786
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||| |||| |||||||||||||| ||  |||||||||||||| |||  ||| ||||| ||| || |||||||||||    
T  23192882 gtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgcctcctccaggataaaacaag-ccagctacaattgttcgattaactactgc 23192786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 5346693 - 5346773
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaact 218  Q
    |||| |||||| |||| ||| |||| ||| |||||||||||| || || ||||||| ||| ||| |||||||| |||||||    
T  5346693 gttttgtggcactgtccaaatttgtacaatacagactatcaatcacgccgcctccaagatgaaacaagttcagctacaact 5346773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 8076080 - 8076176
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||| ||| |||| | |||||||||| ||||||||||    
T  8076080 gtttcgtggcactgcctaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcgattaactactg 8076176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 23866098 - 23866195
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  23866098 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactactgc 23866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 4579538 - 4579635
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| |||||||||||| |||||||||||    
T  4579538 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcgattaactactgc 4579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 12254109 - 12254202
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||| |||||| || ||||||||||||||| ||||||||||| || || |||| |||||||||| |||||||| ||||||||||||||||||||    
T  12254109 gttttgtggcactgcctaaagttgtgcaaggcagactatcaatcacgccgcctacaggataaaacaagttcagctacaactgtgcggttaacta 12254202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 44510742 - 44510645
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| |||| ||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||| | ||||||||||||||||| ||||    
T  44510742 gttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgc 44510645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 6591048 - 6590953
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||| |||||| |||||||| ||||||||| |||||||||||||| || |||| |||||||||| ||||||||||| ||||||| | |||||||||    
T  6591048 gttttgtggcactgtctaaaattgtgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaactact 6590953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 12799461 - 12799537
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||||||||||||| ||  | ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  12799461 ttgtgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgc 12799537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 23246998 - 23246902
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||  |||||||||||| ||||||||||    
T  23246998 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcacctacaactgtgcgattaactactg 23246902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 26341230 - 26341324
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| ||||||||| || |||||||||    
T  26341230 tttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactact 26341324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 8268323 - 8268420
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| |||| ||| |||||||||||||||||||||||| ||  |||||| ||||||| |||| ||| ||||||||| || |||||||||||    
T  8268323 gttttgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccatgataaaacaagtccagctacaactgttcgattaactactgc 8268420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 44423202 - 44423105
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||| |||| |||||||||||| | || ||||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  44423202 gtttcgtggcactgaccaaaattgttcaaggcagactatcaactacgccgcctccaggataaaacaagtccatctacaactgtgcggttaactactgc 44423105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 4930263 - 4930360
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||| ||| || ||||||||||| || ||||||||||||||| |||  ||  ||||||||||||||||||||||||    
T  4930263 gtttcgtggcactgcccaaaattgtgtaagtcatactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactgc 4930360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 25543427 - 25543330
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| | || ||||| |||||||||| | |||||||||||    ||||||||||||||| ||||  || ||||||||||||||||||||||||    
T  25543427 gtttcgtggtactgcctaaaattgtgcaagataaactatcaaccacatcgcctccaggataaaacaagtctagctacaactgtgcggttaactactgc 25543330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 9651032 - 9650964
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagt 206  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  9651032 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagt 9650964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 26287179 - 26287113
Alignment:
Q  169 cagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||| || ||||||||||||||| || | ||| ||||||||||| ||||||||||||    
T  26287179 cagactatcaaccacgccgcctccaggataaaacaaatccagctacaactgtgcagttaactactgc 26287113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 42626616 - 42626559
Alignment:
Q  178 aaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| ||| |||||||||||||||| ||| ||||||||||||||||| ||||||    
T  42626616 aaccatgccgccgccaggataaaataagtccagctacaactgtgcggttaattactgc 42626559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 30258164 - 30258227
Alignment:
Q  172 actatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || || ||||||||||||||| |||| ||| |||||| |||||||||||||||||    
T  30258164 actatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgc 30258227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 13142949 - 13142884
Alignment:
Q  155 aaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgt 220  Q
    ||||||||||| |||||||| ||||| | || ||| ||||||||||| |||||||| |||||||||    
T  13142949 aaagttgtgcatgacagactttcaacaacgccgccaccaggataaaacaagttcagctacaactgt 13142884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 9008214 - 9008290
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| ||| ||||||| ||||  ||||||||||||||| |||| ||  |||||||||| | |||||||||||    
T  9008214 ttgtgcaaggcaggctatcaatcatgaagcctccaggataaaacaagtccaactacaactgtgtgattaactactgc 9008290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 29150985 - 29151044
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaact 218  Q
    ||||||||| || ||||||||||| |  ||||||| |||||||||||||||| |||||||    
T  29150985 ttgtgcaaggcaaactatcaaccacgtcgcctccaagataaaataagttcagctacaact 29151044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 13314301 - 13314204
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| | || | ||| |||||||||  ||||||||| ||| |  ||||||||||||||| ||| |||| ||||||||| |  |||||||||||    
T  13314301 gtttcgtggtactgcccaaaattgtgcaaggtagactatcagccacgtcgcctccaggataaaacaagctcagctacaactgttcaattaactactgc 13314204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 21671225 - 21671322
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||||||||||||| ||||| |||||| |    || ||||| |||||| ||| |||  ||||||||||||||||||||||||    
T  21671225 gtttagtggcactgcccaaagttgtgcaaggcagacaatcaacaacttcgcatccagaataaaacaagctcacctacaactgtgcggttaactactgc 21671322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 233
Target Start/End: Original strand, 7451788 - 7451883
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||| |||| ||| ||||||||| |||||||||||||| |||||||||||||||||| ||| |||| | ||||||||||||||||||||    
T  7451788 gtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgctgcctccaggataaaacaagctcagctgcaactgtgcggttaactact 7451883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 32461614 - 32461517
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  32461614 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagttcagctgcaactgtgcggttaactactgc 32461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 41587225 - 41587128
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || |||  ||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  41587225 gtttcgtgacactgttcaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgc 41587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 39523079 - 39523176
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||  | | ||| |||||||||||||||||||||||| || ||||||||||||||| |||| ||| | ||||||||||||||||||||||    
T  39523079 gtttcgtggcaccgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgc 39523176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 42001464 - 42001560
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || | ||| ||||| |||||||||||||||||| || ||||||||||||||| |||  ||| |||||||||||||||||||||||    
T  42001464 gtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactg 42001560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 12045204 - 12045107
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||||||||||||| |||| || ||||||||||||||| |||   || ||||||||||||||||||||||||    
T  12045204 gtttcgtggcactgcccaaaattgtgcaagacagactatcgaccacgccgcctccaggataaaacaagcatagctacaactgtgcggttaactactgc 12045107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 12501964 - 12501867
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||| ||||||||||||||| || ||||||||||||||| |||  ||| ||||||||| ||||||||||||||    
T  12501964 gtttcgtggcactgcccaaaattgtgcaaaacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcggttaactactgc 12501867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 35679940 - 35679847
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| |||| ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||  ||||||||||| ||||||||    
T  35679940 gtttcgtggcactgtcaaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaactgtgcagttaacta 35679847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 41996695 - 41996791
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || | ||| ||||| |||||||||||||||||| || ||||||||||||||| |||  ||  |||||||||||||||||||||||    
T  41996695 gtttcgtggcactgcccaaaattgtgtaagacagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgtgcggttaactactg 41996791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 556725 - 556822
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  556725 gttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgc 556822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 561497 - 561594
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  561497 gttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgc 561594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 3665962 - 3666059
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| ||  |||| ||||||||| |||| ||  ||||||||||||||||||||||||    
T  3665962 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccacctctaggataaaacaagtccaactacaactgtgcggttaactactgc 3666059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 6514666 - 6514569
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| || |||||| |||||||||||||| || ||||||||||||||| ||| | || |||||||||| |||||||||||||    
T  6514666 gtttcgtggcactgcccaaaattttgcaaggcagactatcaaccacgccgcctccaggataaaacaagcttagctacaactgtgtggttaactactgc 6514569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 10759885 - 10759792
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||| |||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  || |||||||||||||||||||||    
T  10759885 gttttgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccatttacaactgtgcggttaacta 10759792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 20181128 - 20181031
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||||| ||| || ||||||||||||||| ||||| ||  |||||| ||||||| ||| |||  ||||| ||||||||||||||||||    
T  20181128 gtttcgtggcattgtccaaaattatgcaagacagactattaaccacgccacctccatgataaaacaagctcaactacaattgtgcggttaactactgc 20181031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 26667302 - 26667399
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| | ||||||| || |||||||||||    
T  26667302 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgc 26667399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 26938899 - 26938996
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| | ||||||| || |||||||||||    
T  26938899 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgttcgattaactactgc 26938996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 39518440 - 39518537
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||  | | ||| ||||||| | |||||||||||||| || ||||||||||||||| |||| ||| | ||||||||||||||||||||||    
T  39518440 gtttcgtggcaccgcccaaaattgtgcatggcagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgc 39518537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 210
Target Start/End: Original strand, 40147925 - 40147997
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcag 210  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  40147925 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaataagctcag 40147997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 6155484 - 6155387
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| || | |||||||||||||||||||  | ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  6155484 gtttcgtggcactgtccaaaattttacaagacagactatcaaccacaccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 6155387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 12103055 - 12103152
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||  ||||| |||||| |||||||||||    
T  12103055 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaaatgtgcgattaactactgc 12103152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 29168038 - 29167941
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||  ||||||||| || |||||||||||    
T  29168038 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccaactacaactgttcgattaactactgc 29167941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 36937576 - 36937479
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  36937576 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 36937479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 36942330 - 36942233
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  36942330 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 36942233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 37248859 - 37248770
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaa 228  Q
    |||||||||| |  ||||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | |||||||||||||||    
T  37248859 tttcgtggcactacctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaa 37248770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 36428760 - 36428836
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  36428760 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 36428836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 12041997 - 12041900
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | |||  | |||||| || ||||||||||| || ||||||||||||||| |||| ||| ||||||||| || |||||||||||    
T  12041997 gtttcgtggcactgcccaaaaatatgcaaggcaaactatcaaccacgccgcctccaggataaaacaagtccagctacaactgttcgattaactactgc 12041900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 37652895 - 37652832
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaa 201  Q
    |||||||| ||||||| ||| ||||||||| |||||||||||||| ||  ||||||||||||||    
T  37652895 gtttcgtgacattgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaa 37652832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 16116314 - 16116217
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || || | ||| |||||||||||| ||||||||||| ||  |||||  ||||||| |||||||  |||||| || | ||||||||||||    
T  16116314 gtttcgtgacactgcccaaaattgtgcaagacaaactatcaaccacgccacctcctagataaaacaagttcaactacaacagtactgttaactactgc 16116217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 37550087 - 37550034
Alignment:
Q  148 attgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaa 201  Q
    |||||| ||| ||||||||| |||||||||||||| ||  ||||||||||||||    
T  37550087 attgtccaaaattgtgcaaggcagactatcaaccacgccacctccaggataaaa 37550034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 7134 - 7231
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  7134 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgc 7231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 31449931 - 31449834
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| |||| ||| | ||||||||||||||||||||||    
T  31449931 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgc 31449834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 18876432 - 18876335
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| ||  |||  ||||||||||||||||||||||||    
T  18876432 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaaactcatctacaactgtgcggttaactactgc 18876335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 23548697 - 23548600
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| ||| |||| ||||||||| | |||||||||||| |  ||||| ||||||||| |||||||| |||||||| |||||||||||||||    
T  23548697 gtttcgtggcactgtgtaaaattgtgcaaggcggactatcaaccacgtcgcctctaggataaaacaagttcagctacaactgcgcggttaactactgc 23548600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 33416577 - 33416670
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||| ||||||| |||  ||| ||||||||||||||||||||    
T  33416577 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgtgcggttaacta 33416670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 36683609 - 36683706
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||| ||| |||||||||||||| |||||||||||||||||| ||| |||| |||| ||||||| |||||||||||    
T  36683609 gtttcgtggcactgcccaaaattgtgtaaggcagactatcaaccacgctgcctccaggataaaacaaggtcagctacatctgtgcgattaactactgc 36683706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 2965660 - 2965757
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || ||||| |||||||||||| |||||||||||  | ||||| ||||||||| |||| ||| ||||||| ||| ||||||||||||    
T  2965660 gtttcgtggcactgcctaaaattgtgcaagacacactatcaaccacaccgcctctaggataaaacaagtccagctacaactatgcagttaactactgc 2965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 15875733 - 15875636
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| ||||| ||| || |||||||||||    
T  15875733 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaattgtacgattaactactgc 15875636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 19166664 - 19166761
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||| | |||||||||||||| || ||||||||||||||| ||| |||  ||||||||||| ||||||||||||    
T  19166664 gtttcgtggcactgcccaaaattgtgcacggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgc 19166761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 44925988 - 44925895
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||  ||||||| ||||||||||||    
T  44925988 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaaggtcatctacaactatgcggttaacta 44925895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 1911013 - 1910937
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||  |||||||||||||| ||||||||||| |||||| ||| |||  ||||||||||||||||||||||||    
T  1911013 ttgtgcaaagcagactatcaaccacgctgcctccagtataaaacaagctcaactacaactgtgcggttaactactgc 1910937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 40125950 - 40125853
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||| ||||||| |||  ||| ||||||||| || |||||||||||    
T  40125950 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactactgc 40125853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 12820370 - 12820466
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||| || ||||| ||||||||  || |||||||| ||  | ||||||||||||||| |||||||| ||||||||||||  ||||||||||    
T  12820370 tttcgtggcactgcctaaaattgtgcaaagcaaactatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgc 12820466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 38182281 - 38182205
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||| ||||||||| || ||||||||||||||| |||  ||| ||||||||||| ||||||||||||    
T  38182281 ttgtgcaaggcagattatcaaccacgccgcctccaggataaaacaagcacagctacaactgtgctgttaactactgc 38182205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 1807502 - 1807596
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggat-aaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||| || || | ||| ||||||||| |||||||||||||| || ||||| ||||| |||| |||| ||| ||||||||||||||||||||    
T  1807502 gtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctctaggataaaaacaagtccagctacaactgtgcggttaacta 1807596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 17025965 - 17026062
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||  ||||||||||||||||||||| || |  ||||||||||||||| ||||  || ||||||||| || |||||||||||    
T  17025965 gtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgc 17026062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 17556457 - 17556554
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||  ||||||||||||||||||||| || |  ||||||||||||||| ||||  || ||||||||| || |||||||||||    
T  17556457 gtttcgtggcactgcccaacattgtgcaagacagactatcaatcacgtcgcctccaggataaaacaagtctagctacaactgttcgattaactactgc 17556554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 28559719 - 28559626
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| |||| ||| ||||||||| || ||||||||||| || | || ||||||||||||||  |||||| |||||| || |||||||    
T  28559719 gtttcgtggcactgtccaaaattgtgcaaggcaaactatcaaccacgccgtctgcaggataaaataagcccagttagaactgttcgattaacta 28559626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 17953938 - 17953840
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttac-aactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||| ||||||||| || ||||||| ||||||| ||| |||  ||| ||||||| | |||||||||||    
T  17953938 gtttcgtggcactgcccaaaattgtgcaagacagaatatcaaccacgccgcctccaagataaaacaagctcacctacaaactgtgtgattaactactgc 17953840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 24090657 - 24090750
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||||||||||||| |||| |||||| || |  ||||||| ||||||| ||| | |  ||||||||||||||||||||    
T  24090657 gtttcgtggcactgcccaaagttgtgcaaggcagaatatcaatcacgtcgcctccaagataaaacaagcttatctacaactgtgcggttaacta 24090750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 34118496 - 34118593
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| |||||||||||||| |  ||||  ||||||||| |||  ||| ||||||||||| ||||||||||||    
T  34118496 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgtcgcctttaggataaaacaagcccagctacaactgtgctgttaactactgc 34118593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 43302784 - 43302720
Alignment:
Q  138 gtttcgtggcattgtctaaag-ttgtgcaagacagactatcaaccatgctgcctccaggataaaa 201  Q
    ||||||||||| |||| |||  |||||||||  ||||||||||||| || |||||||||||||||    
T  43302784 gtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcctccaggataaaa 43302720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 7571283 - 7571186
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||||||||||||||| || || ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  7571283 gtttcgtggcactgcccaaaattgtgcaagacagactatcaatcacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgc 7571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 8883198 - 8883295
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| |||||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  8883198 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgctgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 8883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 8069708 - 8069804
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  8069708 gtttcgtggcactgtccaaa-ttgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 8069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 55431343 - 55431440
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || |||| ||| || |||||| |||||||||||||| || ||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  55431343 gtttcgtgacactgtcaaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgc 55431440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 39775793 - 39775696
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  39775793 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgc 39775696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 235
Target Start/End: Original strand, 18472037 - 18472132
Alignment:
Q  140 ttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| || ||||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  18472037 ttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 18472132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 758433 - 758336
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |  | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  758433 gtttcgtggcactacccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 758336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 3657305 - 3657208
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||||||  |||||| ||||||| |||| ||| |||||||||  | |||||||||||    
T  3657305 gtttcgtggcactgttcaaaattgtgcaagacagactatcaaccatgccacctccaagataaaacaagtccagctacaactgttagattaactactgc 3657208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 23666188 - 23666095
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||    
T  23666188 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaacta 23666095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 24038436 - 24038343
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||    
T  24038436 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaacta 24038343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 32474745 - 32474648
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || | ||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  32474745 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgtctccaggataaaacaagcccagctacaactgttcgattaactactgc 32474648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 12112706 - 12112614
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaact 230  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||  | ||||||||||||||| ||| |||  ||||| || | ||||||||    
T  12112706 gtttcgtggcactgtccaaagttgtgcaagacagactatcaaccacaccgcctccaggataaaacaagctcaactacaaatgggtggttaact 12112614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 234
Target Start/End: Original strand, 20520082 - 20520178
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || | ||  |||||||||  ||||||||||||| || ||||||| ||||||| |||| ||| |||||||||||||||||||||||    
T  20520082 gtttcgtggcactgcccaagattgtgcaagggagactatcaaccacgccgcctccaagataaaacaagtccagctacaactgtgcggttaactactg 20520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 8887970 - 8888053
Alignment:
Q  150 tgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||| ||| |||||||||||||| ||||||||| || ||||||||||||||| || | ||| | ||||||||||||||||||||    
T  8887970 tgtccaaaattgtgcaagacagattatcaaccacgccgcctccaggataaaacaaatccagctgcaactgtgcggttaactact 8888053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 231
Target Start/End: Complemental strand, 23661527 - 23661436
Alignment:
Q  140 ttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||    
T  23661527 ttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaacta 23661436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 49971489 - 49971394
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||| | || ||| ||||||||| ||||||||||| || || ||||||||||||||| |||| ||| | ||||||||| ||||||||||    
T  49971489 gtttcgtggcactatccaaaattgtgcaaggcagactatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcagttaactact 49971394  T

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Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 3672614 - 3672711
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  3672614 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 3672711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 3692646 - 3692743
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  3692646 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 3692743  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 14438760 - 14438663
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |  | ||| ||||||||| ||||| |||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  14438760 gtttcgtggcactacccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 14438663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 29350268 - 29350365
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| ||||| ||| ||||||| ||||||||||||||| ||| |||  |||||||||| |||||| ||||||    
T  29350268 gtttcgtggcactgcccaaaattgtgcaaggcagaccatctaccatgccgcctccaggataaaacaagctcaactacaactgtgtggttaattactgc 29350365  T

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Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 28125145 - 28125242
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggat--aaaataagttcagttacaactgtgcggttaactactg 234  Q
    |||||||||| ||  |||| |||||||||||||||||| |||||  |||||||||||||  |||| |||||||  ||||| |||||||| ||||||||    
T  28125145 tttcgtggcactgcttaaaattgtgcaagacagactattaaccacactgcctccaggattaaaaacaagttcaactacaattgtgcggtcaactactg 28125242  T

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Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 3033672 - 3033769
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||| ||||||||||||||  | ||||| ||||||||| ||| |||| ||||||||| || |||||||||||    
T  3033672 gtttcatggcactgcccaaaattgtgcaaggcagactatcaaccacaccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgc 3033769  T

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Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 3419023 - 3419116
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| ||  ||| |||||||||| ||| |||  | ||||||||||||||||||    
T  3419023 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccaccttcaggataaaacaagctcaactgcaactgtgcggttaacta 3419116  T

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Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 18467253 - 18467350
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||| ||||| || ||||||||||||||| |||| ||  ||||| ||| || |||||||||||    
T  18467253 gtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaactactgc 18467350  T

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Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 27708996 - 27709061
Alignment:
Q  170 agactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  27708996 agactatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactactgc 27709061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 29715672 - 29715765
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||| || |||| ||| |||||| ||  ||||||||||||| || ||||| ||||||||| |||| ||| |||| |||||||||||||||    
T  29715672 gtttcgtgacactgtccaaaattgtgctaggaagactatcaaccacgccgcctctaggataaaacaagtccagctacagctgtgcggttaacta 29715765  T

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Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 12965917 - 12965845
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||| ||  ||||| ||| || |||||||    
T  12965917 ttgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaattgttcgattaacta 12965845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 17026157 - 17026074
Alignment:
Q  151 gtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||| |||||||||||||||||||||| | | || ||  ||||||||| |||||||| ||||| ||||||| ||||||||||    
T  17026157 gtctaaatttgtgcaagacagactatcaacaacgttgtctttaggataaaacaagttcagctacaattgtgcgg-taactactgc 17026074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 19276980 - 19276888
Alignment:
Q  143 gtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||| |||| ||| ||||| |||||||||||||||||| | |||||| || |||||| ||| ||| ||| |||| |||||||| |||||||    
T  19276980 gtggcactgtcgaaaattgtgtaagacagactatcaaccacgttgcctctagaataaaacaagctcaattaaaactatgcggttagctactgc 19276888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 12971698 - 12971601
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||| | ||| |||||||||||||| |||||| || || ||||| ||||||||| |||  ||  ||||||||| |  |||||||||||    
T  12971698 gtttcgtggcattgcccaaaattgtgcaagacagattatcaatcacgccgcctctaggataaaacaagcccaactacaactgttcaattaactactgc 12971601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 55325853 - 55325897
Alignment:
Q  187 gcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||    
T  55325853 gcctccaggataaaacaagcccagttacaactgtgcggttaacta 55325897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 6596388 - 6596325
Alignment:
Q  172 actatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || ||||||||||||||| ||| |||| ||||| | || |||||||||||||    
T  6596388 actatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgc 6596325  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 16013759 - 16013805
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataag 205  Q
    |||||||||| |||||||| |||| || |||||||||||||||||||    
T  16013759 ttgtgcaagatagactatccaccacgccgcctccaggataaaataag 16013805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 25726788 - 25726756
Alignment:
Q  203 aagttcagttacaactgtgcggttaactactgc 235  Q
    |||| ||||||||||||||||||||||||||||    
T  25726788 aagtgcagttacaactgtgcggttaactactgc 25726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 29677411 - 29677508
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||  |||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  29677411 gtttcgtggcactgcccaaaattgtgcaaagcagactatcaaccacgccgcctccaggataaaataagtccagctacaactgtgcggttaactactgc 29677508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 1935058 - 1934965
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||    
T  1935058 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaacta 1934965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 10160789 - 10160696
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| ||| |||| | ||||||||||||||||||    
T  10160789 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcagctgcaactgtgcggttaacta 10160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 19892531 - 19892434
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| |||| ||| |||||||| ||||||||||||||| || ||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  19892531 gtttcctggcactgtccaaaattgtgcaacacagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgc 19892434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 9180789 - 9180692
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| |||||||||  | |||||||||||    
T  9180789 gtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgc 9180692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 9189868 - 9189771
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| |||||||||  | |||||||||||    
T  9189868 gtttcgtggcactgtccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtttgattaactactgc 9189771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 12796955 - 12797052
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||| |||| ||||||||||||||||||| || | ||||||||||||| |||| | | ||||||||||||||||||||||||    
T  12796955 gttttgtggcactgcccaaaattgttcaagacagactatcaaccacgccgtctccaggataaaacaagtccggctacaactgtgcggttaactactgc 12797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 35639062 - 35638965
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||  ||||||||| || ||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  35639062 gtttcgtggcactgcccaaaattgtgcaagacagcgtatcaaccacgccgcctccaggataaaacaagctcagctacaactgttcgattaactactgc 35638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 42926824 - 42926727
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||  ||||||||||||| || ||||||||||||| | ||| |||  ||||||||||||||||||||||||    
T  42926824 gtttcgtggcactgcccaaaattgtgcaaggtagactatcaaccacgccgcctccaggataatacaagctcaactacaactgtgcggttaactactgc 42926727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 21523785 - 21523689
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactg 234  Q
    ||||||||||| || | ||| |||||||||  ||||||||||||| || || || ||| ||||| |||||||| |||||||||||||||||||||||    
T  21523785 gtttcgtggcactgcccaaaattgtgcaagggagactatcaaccacgccgcttctaggttaaaacaagttcagctacaactgtgcggttaactactg 21523689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 25497369 - 25497297
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||||||||||||||    
T  25497369 ttgtgcaagtcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaacta 25497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 30658314 - 30658390
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  30658314 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 30658390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 30650959 - 30651056
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||| ||||||| |||  ||| ||||||||| || |||||||||||    
T  30650959 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaagataaaacaagcccagctacaactgttcgattaactactgc 30651056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 35601952 - 35602049
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| |||||||||||||| ||||||||| || ||||||||||||||| ||   ||| ||||| ||| || |||||||||||    
T  35601952 gtttcgtggcactgtccaaaattgtgcaagacagagtatcaaccacgccgcctccaggataaaacaaacccagctacaattgttcgattaactactgc 35602049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 29677818 - 29677894
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| || ||||||||||| || |||| |||||||||| |||  ||| ||||||||||||||||||||||||    
T  29677818 ttgtgcaaggcaaactatcaaccaagccgcctacaggataaaaaaagcccagctacaactgtgcggttaactactgc 29677894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 19578464 - 19578386
Alignment:
Q  153 ctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||| |||||||||  |||||||||||||||||||||||||| ||||| |||| ||  ||||| || |||||||||||    
T  19578464 ctaaaattgtgcaaggaagactatcaaccatgctgcctccagggtaaaacaagtccaactacaattgggcggttaacta 19578386  T

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Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 18344461 - 18344558
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||| ||||| || | ||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  18344461 gtttcgtggcactgcccaaaattgtgcaaggcagactattaaccacgccggctccaggataaaacaagcccagctacaactgttcgattaactactgc 18344558  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 28603328 - 28603430
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatg----ctgcctccaggat-aaaataagttcagttacaactgtgcggttaactac 232  Q
    |||||||| || |||| ||| |||||||||||||||||||||||| |    || |||||||||| |||| |||||||| ||||||||| || ||||||||    
T  28603328 gtttcgtgacactgtccaaaattgtgcaagacagactatcaaccacgctacctacctccaggataaaaacaagttcagctacaactgttcgattaactac 28603427  T
Q  233 tgc 235  Q
    |||    
T  28603428 tgc 28603430  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 31326790 - 31326866
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||||||||||||| ||  |||||||||||||| |||  ||  |||||||||||| |||||||||||    
T  31326790 ttgtgcaaggcagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtgcgattaactactgc 31326866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 7737916 - 7737853
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaa 201  Q
    |||| |||||| || | ||| |||||||||||||||||||||||| || |||||||||||||||    
T  7737916 gttttgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaa 7737853  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 40847660 - 40847565
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||| |||||| |||  ||||||||||||| || ||||||||||| ||  ||||| |||||||| |||| ||  |||||||||| |||||||||||    
T  40847660 gttttgtggcactgttcaaagttgtgcaaggcaaactatcaaccacgccacctcctggataaaacaagtccaactacaactgtgtggttaactact 40847565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 201
Target Start/End: Original strand, 30631610 - 30631672
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaa 201  Q
    ||||||||||||| | ||| |||||||||| ||||||||||||| ||  ||||||||||||||    
T  30631610 tttcgtggcattgccaaaaattgtgcaagaaagactatcaaccacgccacctccaggataaaa 30631672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 25478362 - 25478277
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcg 223  Q
    |||||||| || || | ||| ||||||||| |||||||||||||| || |||||||| |||||| |||  ||| ||||||||||||    
T  25478362 gtttcgtgacactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccagaataaaacaagcccagctacaactgtgcg 25478277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 13291586 - 13291512
Alignment:
Q  157 agttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||||||| | ||||||||||| || ||| | | |||| ||||||||||| ||||||| |||| |||||||    
T  13291586 agttgtgcaagataaactatcaaccacgccgccactatgatagaataagttcagctacaactatgcgattaacta 13291512  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 32079441 - 32079502
Alignment:
Q  170 agactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||||| || | || ||||||||||||| | |||||| |||||||||||| |||||||    
T  32079441 agactatcaatcacgttgtctccaggataaaaaaggttcagctacaactgtgcgattaacta 32079502  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 17545346 - 17545270
Alignment:
Q  155 aaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||||||||||| | ||||||||||||| ||  |||| ||||||||| |||  ||  |||||| |||||||||||||    
T  17545346 aaagttgtgcaaaaaagactatcaaccacgccacctcgaggataaaacaagcacatctacaacagtgcggttaacta 17545270  T

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Target: scaffold0057 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 35664 - 35761
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  35664 gtttcgtgacactggccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcggttaactactgc 35761  T

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Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 33687668 - 33687571
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||||||||||||||||||||| | ||||||||||||| ||  |||  ||||||||||||||||||||||||    
T  33687668 gtttcgtggcactggccaaaattgtgcaagacagactatcaaccatgccgtctccaggataaaacaaactcaactacaactgtgcggttaactactgc 33687571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 17964624 - 17964527
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| | || ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  17964624 gtttcgtggcactatccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactactgc 17964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 21309061 - 21309158
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||| ||||| || | ||| ||||||||  |||||||||||||| || ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  21309061 gtttcatggcactgcccaaaattgtgcaatgcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactactgc 21309158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 6407925 - 6407830
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||| || | ||| |||| |||  |||||||||||||| || ||||||||||||||| ||| |||| ||||||||||||||||||||||    
T  6407925 gtttcgtggcactgcccaaaattgtacaaagcagactatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggttaactact 6407830  T

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Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 233
Target Start/End: Complemental strand, 11570814 - 11570719
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||| || | ||| ||||||||| ||||| |||||||| || ||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  11570814 gtttcgtggcactgcccaaaattgtgcaaggcagacaatcaaccacgccgcctccaggataaaacaagctcagctacaactgtgcggtgaactact 11570719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 12689022 - 12689096
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||| |||||||||||||| || | ||||||||||||| ||| |||| ||||||||||||||||||||||    
T  12689022 ttgtgcaaggcagactatcaaccacgccgtctccaggataaaacaagctcagctacaactgtgcggttaactact 12689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 24589229 - 24589132
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || | || ||| |||||||||| ||||||||||||| || | ||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  24589229 gtttcgtgacactttccaaaattgtgcaagatagactatcaaccacgccgtctccaggataaaacaagtccaactacaactgtgcggttaactactgc 24589132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 2700171 - 2700074
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||| || || |||||||||||| |||  ||  ||||||||| || |||||||||||    
T  2700171 gtttcgtggcactgttcaaaattgtgcaagacagactatcaaccacgccgcttccaggataaaacaagcccaactacaactgttcgattaactactgc 2700074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 16836221 - 16836132
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggtta 227  Q
    ||||||||||| || | ||| |||| |||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||||||||||    
T  16836221 gtttcgtggcactgcccaaaattgtacaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggtta 16836132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 20748337 - 20748252
Alignment:
Q  150 tgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| ||| ||||||||| | |||||||||||| || |||||||| |||||| |||| ||  ||||||||||||||||||||||||    
T  20748337 tgtccaaaattgtgcaaggccgactatcaaccacgccgcctccagaataaaacaagtccatctacaactgtgcggttaactactgc 20748252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 11614136 - 11614064
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||| |||||||||||||| || ||||||||||||||| |||  || |||||| ||||||||||||||    
T  11614136 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcacaattacaattgtgcggttaacta 11614064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 12406418 - 12406321
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || |||||||||||||||  |||||||||| || || |||| || ||||||| | | |||  |||||||||| |||||||||||||    
T  12406418 gtttcgtggcagtgcctaaagttgtgcaaggaagactatcaatcacgccgccttcatgataaaacatgctcaactacaactgtgtggttaactactgc 12406321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 29892326 - 29892233
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    |||| |||||| || | ||| |||||||||||| |||||||||||  |  |||||||||||||| |||| ||| |||||||||| |||||||||    
T  29892326 gtttggtggcactgcccaaaattgtgcaagacaaactatcaaccacacctcctccaggataaaacaagtccagctacaactgtgtggttaacta 29892233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 4157413 - 4157337
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||| ||| |||||||  ||||||| ||||||||| ||  |||| |||||| |||||||||||||||||    
T  4157413 ttgtgcaagacatactttcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgc 4157337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 8747833 - 8747909
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||||| |||||||| | || ||||||||||||||| ||| |||| | ||||| || |||||||||||||    
T  8747833 ttgtgcaagacaggctatcaacaacgccgcctccaggataaaacaagctcagctgcaactatgtggttaactactgc 8747909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 13736743 - 13736646
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || ||||| |||||||||  |||||| ||||||  ||||||||||||||||| |||  ||  ||||| ||||||  ||||||||||    
T  13736743 gtttcgtggcactgcctaaaattgtgcaaggaagactaccaaccacactgcctccaggataaaacaagcacatctacaaatgtgcgaataactactgc 13736646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 14509014 - 14509111
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| || |||  ||| |||||||||||||| ||||||||| || || |||| ||||||| ||| |||  ||||||||| || |||||||||||    
T  14509014 gtttcgtgtcactgttcaaaattgtgcaagacagattatcaaccacgccgcttccaagataaaacaagctcatctacaactgttcgattaactactgc 14509111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 22695336 - 22695239
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| |||||   ||| |||||||||||| || ||||| ||  | ||||||| ||||||| |||| ||| |||||||||||||||||| |||||    
T  22695336 gtttcgtgacattgctcaaaattgtgcaagacatacaatcaatcacaccgcctccacgataaaacaagtacagctacaactgtgcggttaaccactgc 22695239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11534727 - 11534679
Alignment:
Q  187 gcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||||||| ||| |||  |||||||||||||| |||||||||    
T  11534727 gcctccaggataaaacaagctcaactacaactgtgcggtgaactactgc 11534679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 11560237 - 11560189
Alignment:
Q  187 gcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||||||| ||| |||  |||||||||||||| |||||||||    
T  11560237 gcctccaggataaaacaagctcaactacaactgtgcggtgaactactgc 11560189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 31269064 - 31269161
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || ||||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| |||||| ||| |||||||||||||    
T  31269064 gtttcgtggcactgcctaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaaccgtgtggttaactactgc 31269161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 31273551 - 31273648
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| |||  ||| |||||||||| |||||||||||||    
T  31273551 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgtggttaactactgc 31273648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 55251749 - 55251846
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||| ||  |||||||||||||| |||  ||  ||||||||| ||||||||||||||    
T  55251749 gtttcgtggcactgtccaaaattgtgcaagacagactatcaaccacgccacctccaggataaaacaagcccaactacaactgtacggttaactactgc 55251846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 16421060 - 16421156
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||| || | ||| ||||||||| |||||||||||||| || |||| |||||||||| |||  ||| ||||||||||||||||||||||||    
T  16421060 tttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctacaggataaaacaagcccagctacaactgtgcggttaactactgc 16421156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 32082154 - 32082059
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| ||||| |||| ||| ||||||||| || ||||||||||| || ||||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  32082154 tttcatggcactgtccaaaattgtgcaaggca-actatcaaccacgccgcctccaggataaaacaagctcagttacaattgtgcggttaactactgc 32082059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 37259921 - 37259845
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||||||||||||||||||    
T  37259921 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggttaactactgc 37259845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 13059440 - 13059537
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| ||  |||| ||||||||||||||||||||||||  | ||||| || |||||| ||| |||| |||||||||| |||||||||||||    
T  13059440 gtttcgtggcactgcataaaattgtgcaagacagactatcaaccactccgcctctagaataaaacaagctcagctacaactgtgtggttaactactgc 13059537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 37264629 - 37264532
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| || |||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  37264629 gtttcgtggcactgcccaaaattatgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaattgtgcggttaactactgc 37264532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 4551044 - 4551124
Alignment:
Q  155 aaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||||||||||||||| | || ||||||||||||||| ||  ||| |||||||| |||| |||||||||||    
T  4551044 aaagttgtgcaagacagactatcaactacgccgcctccaggataaaacaaactcaattacaactctgcgattaactactgc 4551124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 19102028 - 19102104
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||| ||||||||||||||| |  ||||||||||||||| |||| ||  ||||||||||||||||||||||||    
T  19102028 ttgtgcaaaacagactatcaaccacgtcgcctccaggataaaacaagtccaactacaactgtgcggttaactactgc 19102104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 19541225 - 19541129
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| || ||||  ||||||||| |||| ||| |||||| || || |||||||||||    
T  19541225 tttcgtggcattgtttaaaattgtacaagacagactatcaaccacgccgcctataggataaaacaagtccagctacaacagttcgattaactactgc 19541129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 5271484 - 5271402
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgt 220  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| |||| ||  |||||||||    
T  5271484 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagtccaactacaactgt 5271402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 31765916 - 31765998
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgt 220  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||| ||| |||||||||    
T  31765916 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgt 31765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 12874571 - 12874664
Alignment:
Q  140 ttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||| |||||||| ||||||||  ||||| ||||| || || ||||||||||||||| ||| |||| || || ||||||||||||||||    
T  12874571 ttcgtggcactgtctaaaattgtgcaaagcagaccatcaatcacgccgcctccaggataaaacaagctcagctaaaattgtgcggttaactact 12874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 31729452 - 31729355
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |  | ||| ||||||||| ||||| ||||| || || ||||||||||||||| |||| ||| | ||||||||||||||||||||||    
T  31729452 gtttcgtggcactacccaaaattgtgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtccagctgcaactgtgcggttaactactgc 31729355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 8693762 - 8693838
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||| ||||||||||| || ||||| ||||||||| ||| |||| ||||||||| || |||||||||||    
T  8693762 ttgtgcaagacatactatcaaccacgccgcctcaaggataaaacaagctcagctacaactgttcgattaactactgc 8693838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 13522057 - 13521989
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagt 206  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  13522057 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgccgcctccaggataaaacaagt 13521989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 47574676 - 47574752
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||||| | |||||| || || || |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  47574676 ttgtgcaagacaaaatatcaatcacgccgcatccaggataaaacaagtccagctacaactgtgcggttaactactgc 47574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 51697968 - 51698040
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||| |||||||||||||| || ||||||||||||||| ||| |||  ||||| ||||||||||||||    
T  51697968 ttgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaattgtgcggttaacta 51698040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 48276680 - 48276617
Alignment:
Q  172 actatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || ||||||||||||||| |||||||| ||||||||| || |||||||||||    
T  48276680 actatcaaccacgccgcctccaggataaaacaagttcagctacaactgttcgattaactactgc 48276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Original strand, 47244305 - 47244375
Alignment:
Q  165 aagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| ||||||||||||| || ||||||||||||||| |||  ||  ||||||||||||||||||||||||    
T  47244305 aagaaagactatcaaccacgccgcctccaggataaaacaagcacaactacaactgtgcggttaactactgc 47244375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 8030541 - 8030444
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||| |||||||||| ||||||||||| | |||||||||||||||||| |||  ||| ||||| ||| || |||||||||||    
T  8030541 gttttgtggcactgcccaaaattgtgcaagatagactatcaacaacgctgcctccaggataaaacaagcccagctacaaatgttcgattaactactgc 8030444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 33463421 - 33463324
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| |||| ||||||||||||| |||| | ||||||  || ||||||||||||||| |||  ||  ||||||||| || |||||||||||    
T  33463421 gtttcgtggcactgtccaaagttgtgcaaggcagattgtcaaccccgccgcctccaggataaaacaagcacaactacaactgttcgattaactactgc 33463324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 42758820 - 42758723
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||||||||||||||| |  |||||||| ||||||  ||| ||   ||||||||||| |||||||||||    
T  42758820 gtttcgtggcactgcccaaaattgtgcaagacagactatcaaccacgtcgcctccagaataaaactagtccaaaaacaactgtgcgattaactactgc 42758723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 12823959 - 12823892
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagt 206  Q
    |||||||||| || | ||| |||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  12823959 tttcgtggcactgcccaaaattgtgcaagacaaactatcaaccacgccgcctccaggataaaacaagt 12823892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 16948063 - 16948126
Alignment:
Q  170 agactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||| | || ||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  16948063 agactatcaactacgccgcctccaggataaaacaagttcattgacaactgtgcgattaactact 16948126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 19906293 - 19906363
Alignment:
Q  150 tgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgt 220  Q
    |||||||| ||||||||||||||||||||||   || ||||||||||||||| ||| |||  |||||||||    
T  19906293 tgtctaaaattgtgcaagacagactatcaactccgccgcctccaggataaaacaagctcaactacaactgt 19906363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 33469038 - 33468941
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| |||||| || | ||||||||||||| |||||| ||||||| ||  |||||| ||||||| ||| |||| ||||| ||| || |||||||||||    
T  33469038 gttttgtggcactgcccaaagttgtgcaaggcagactgtcaaccacgccacctccatgataaaacaagctcagctacaattgttcgattaactactgc 33468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 2819874 - 2819954
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaact 218  Q
    ||||||||| | |||| ||| |||||||||  |||||||| ||||||| || |||||||||||| ||||| || |||||||    
T  2819874 gtttcgtggtactgtccaaaattgtgcaaggtagactatctaccatgccgcgtccaggataaaacaagtttagctacaact 2819954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 5928263 - 5928187
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||| ||||||||||||||  | ||||||||||||||| |||  ||| | ||||||| || |||||||||||    
T  5928263 ttgtgcaaggcagactatcaaccacaccgcctccaggataaaacaagcccagctgcaactgttcgattaactactgc 5928187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 12878290 - 12878366
Alignment:
Q  159 ttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||  ||||||||||| || ||  ||||||| |||||| |||||||| ||||||||||  ||||| ||||||    
T  12878290 ttgtgcaaagcagactatcaatcacgccacctccagaataaaacaagttcagctacaactgtgttgttaattactgc 12878366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 255845 - 255944
Alignment:
Q  136 aggtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||||| |  | ||| |||||||||||| ||||||||| |||| ||||||||||||||| |||| ||| |||||||||| |||||||||||||    
T  255845 aggtttcgtggcactacccaaaattgtgcaagacatactatcaactatgccgcctccaggataaaacaagtccagctacaactgtgtggttaactactgc 255944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2020 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 401 - 486
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcg 223  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||| |  ||||||||||||||| ||| |||| ||||||||||||    
T  401 gtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcg 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 83120 - 83193
Alignment:
Q  162 tgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||| ||||||||||||||||| ||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  83120 tgcaaggcagactatcaaccatgccgcctccaggataaaacaagctcagctgcaactgtgcggttaactactgc 83193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 165094 - 165009
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcg 223  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||| |  ||||||||||||||| ||| |||| ||||||||||||    
T  165094 gtttcatggcattgtccaaagttgtgcaagacacactatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcg 165009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 9952 - 9855
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  9952 gtttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 9855  T

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Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 166151 - 166054
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    ||||||||||| || | ||| |||||||||||| ||||||||||| || ||||||||||||||| |||  ||| | ||||||||||||||| ||||||    
T  166151 gtttcgtggcactgccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaattactgc 166054  T

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Target: scaffold0002 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 4105 - 4201
Alignment:
Q  139 tttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||| || | ||| ||||||||| |||||||||||||| || ||||||||||||||| |||  ||| ||||||||| || |||||||||||    
T  4105 tttcgtggcactgcccaaaattgtgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgttcgattaactactgc 4201  T

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Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 444008 - 443917
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaacta 231  Q
    ||||||||||| || | ||| ||||||||| |||||||||||||| || | ||| ||||||||| |||  ||| ||||||||||||||||||||    
T  444008 gtttcgtggcactgccaaaa-ttgtgcaaggcagactatcaaccacgccgtctc-aggataaaacaagcccagctacaactgtgcggttaacta 443917  T

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Target: scaffold0054 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 25445 - 25524
Alignment:
Q  154 taaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    |||| |||||||||||||||||||||||| || || |||||||||||| |||  ||  ||||||||||||||||||||||    
T  25445 taaaattgtgcaagacagactatcaaccacgccgcgtccaggataaaacaagcccaactacaactgtgcggttaactact 25524  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 29209 - 29282
Alignment:
Q  161 gtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||||||| ||||||||||| || | || |||||||||||||||  |  || |||||||||||||||||||||    
T  29209 gtgcaagaca-actatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgc 29282  T

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Target: scaffold0128 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 13334 - 13397
Alignment:
Q  170 agactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactact 233  Q
    ||||||||||||||| |||||||| |||| || |||||||  ||||||||||||||||||||||    
T  13334 agactatcaaccatggtgcctccaagatacaacaagttcaactacaactgtgcggttaactact 13397  T

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Target: scaffold1050 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 1194 - 1267
Alignment:
Q  162 tgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||| | |||||| ||||| ||||||||||||  |||| |||||||| ||| ||||||||||||||||||||    
T  1194 tgcaaggcggactataaaccacgctgcctccaggcaaaaacaagttcagctacgactgtgcggttaactactgc 1267  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 155544 - 155486
Alignment:
Q  177 caaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||||| || ||||| ||||||||| |||||||| |||||||||||| |||||||||||    
T  155544 caaccacgccgcctctaggataaaacaagttcagctacaactgtgcgattaactactgc 155486  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 2339 - 2435
Alignment:
Q  138 gtttcgtggcattgtctaaagttgtgcaagacagactatcaaccatgctgcctccaggataaaataagttcagttacaactgtgcggttaactactgc 235  Q
    |||| ||| |||||| |||| |||||||||||||| ||||||||| || ||||| || |||||| ||  |||| |||||||||| | |||||||||||    
T  2339 gttttgtgccattgtttaaaattgtgcaagacaga-tatcaaccacgccgcctctagtataaaacaaactcaggtacaactgtgagattaactactgc 2435  T

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