View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3969_low_19 (Length: 249)
Name: NF3969_low_19
Description: NF3969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3969_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43357527 - 43357291
Alignment:
| Q |
1 |
agctttggaggaatcactttctctcccaatatattccacaactcttgtctgtattccaagtccagagacacatctctttcatgatacattactcttaaac |
100 |
Q |
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| T |
43357527 |
agctttggaggaatcactttctctcccaatatattccacaactcttgtctgtattccaagtccagagacacatctctttcatgatacattactcttaaac |
43357428 |
T |
|
| Q |
101 |
ttctcaacaagaaatggattgtgttgcaatcttgaaatgttttccttattcctctcaaacttgttgtgtaaagaatgattgaattgcttcctcctggtgg |
200 |
Q |
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| T |
43357427 |
ttctcaacaagaaatggattgtgttgcaatcttgaaatgttttccttattcctctcaaacttgttgtgtaaagaatgattgaattgcttcctcctggtgg |
43357328 |
T |
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| Q |
201 |
acacttttcttcaaaatctttaagtgatggataccct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
43357327 |
acacttttcttcaaaatctttaagtgatggataccct |
43357291 |
T |
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