View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3969_low_9 (Length: 319)

Name: NF3969_low_9
Description: NF3969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3969_low_9
NF3969_low_9
[»] chr4 (9 HSPs)
chr4 (13-280)||(47776853-47777118)
chr4 (278-319)||(51347486-51347527)
chr4 (278-316)||(20588560-20588598)
chr4 (278-319)||(43021890-43021931)
chr4 (278-319)||(50120005-50120046)
chr4 (279-319)||(36743249-36743289)
chr4 (285-319)||(24547336-24547370)
chr4 (278-319)||(3757724-3757765)
chr4 (282-319)||(13171627-13171664)
[»] chr6 (4 HSPs)
chr6 (112-280)||(6607199-6607366)
chr6 (13-108)||(6607069-6607164)
chr6 (279-319)||(9737800-9737840)
chr6 (279-319)||(15045594-15045634)
[»] chr5 (4 HSPs)
chr5 (112-280)||(2331037-2331204)
chr5 (13-108)||(2330907-2331002)
chr5 (279-319)||(36887016-36887056)
chr5 (279-318)||(17643434-17643473)
[»] chr3 (4 HSPs)
chr3 (278-319)||(8528151-8528192)
chr3 (278-319)||(29530609-29530650)
chr3 (282-319)||(26102198-26102235)
chr3 (285-319)||(35855209-35855243)
[»] chr8 (4 HSPs)
chr8 (279-319)||(24053913-24053953)
chr8 (279-319)||(36776403-36776443)
chr8 (286-319)||(9472158-9472191)
chr8 (279-319)||(41152667-41152707)
[»] chr2 (3 HSPs)
chr2 (279-319)||(10876617-10876657)
chr2 (289-318)||(42781020-42781049)
chr2 (291-319)||(19486200-19486228)
[»] chr7 (3 HSPs)
chr7 (280-319)||(7857056-7857095)
chr7 (280-319)||(44804520-44804559)
chr7 (279-319)||(39276612-39276652)
[»] scaffold0009 (1 HSPs)
scaffold0009 (282-319)||(108549-108586)
[»] chr1 (4 HSPs)
chr1 (282-319)||(46626372-46626409)
chr1 (279-319)||(19322392-19322432)
chr1 (278-318)||(22198956-22198996)
chr1 (279-319)||(38894754-38894794)


Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 280
Target Start/End: Original strand, 47776853 - 47777118
Alignment:
Q  13 aatattttccttgtagagtagaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcgaaataaaattatggcttgaataggttttag 112  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  47776853 aatattttccttgtaaagttgaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcaaaatacaattatggcttaaataggttttag 47776952  T
Q  113 tttgtataaaacatgttttgtttttgtttgatcctctaaaagttttcttgtcatcttatgtcaatattattttaatcactg-tgtcaatattttttgaat 211  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||||||||    
T  47776953 tttgtataaaacatg--ttgtttttgtttgatcctctaaaagttttcttgtcatcttgtgtgaatattattttaatcactgttgtcaata-tttttgaat 47777049  T
Q  212 taagtgataatgtgattaacaaaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 280  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47777050 taagtgatgatgtgattaacgaaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 47777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 51347486 - 51347527
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51347486 aatctatatactaataagaaaagaaatgtcccttgaatttac 51347527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 20588560 - 20588598
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatt 316  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20588560 aatctatatactaataagaaaagaaatgtcccttgaatt 20588598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 43021890 - 43021931
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  43021890 aatctatatactaataagaaaagaaatgttccttgaatttac 43021931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 50120046 - 50120005
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  50120046 aatctatatactaataagaaaaggaatgtcccttgaatttac 50120005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 36743289 - 36743249
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  36743289 atctatatactaataagaaaagaaatgtcccttaaatttac 36743249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 24547336 - 24547370
Alignment:
Q  285 atactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||    
T  24547336 atactaataagaaaagaaatgtcccttgaatttac 24547370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 3757724 - 3757765
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||| | ||||||||||    
T  3757724 aatctatatactaataagaaaagaaatgttcattgaatttac 3757765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 13171627 - 13171664
Alignment:
Q  282 tatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||| |||||||||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttac 13171664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 7e-77; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 6607199 - 6607366
Alignment:
Q  112 gtttgtataaaacatgttttgtttttgtttgatcctctaaaagttttcttgtcatcttatgtcaatattattttaatcactg-tgtcaatattttttgaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  6607199 gtttgtataaaacatgttttgtttttgtttgatcctctaaaagttttcttgtcatcttatgtcaatattattttaatcactgttgtcaata-tttttgaa 6607297  T
Q  211 ttaagtgataatgtgattaacaaaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 280  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6607298 ttaagtgataatgtgattaac-aaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 6607366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 6607069 - 6607164
Alignment:
Q  13 aatattttccttgtagagtagaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcgaaataaaattatggcttgaataggtt 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6607069 aatattttccttgtaaagtagaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcgaaataaaattatggcttgaataggtt 6607164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 9737840 - 9737800
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9737840 atctatatactaataagaaaagaaatgtcccttgaatttac 9737800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 15045634 - 15045594
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttac 15045594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 7e-77; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 2331037 - 2331204
Alignment:
Q  112 gtttgtataaaacatgttttgtttttgtttgatcctctaaaagttttcttgtcatcttatgtcaatattattttaatcactg-tgtcaatattttttgaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2331037 gtttgtataaaacatgttttgtttttgtttgatcctctaaaagttttcttgtcatcttatgtcaatattattttaatcactgttgtcaata-tttttgaa 2331135  T
Q  211 ttaagtgataatgtgattaacaaaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 280  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2331136 ttaagtgataatgtgattaac-aaagatcatcccattaccacatgaaccaccatgtggcactcaacgaat 2331204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 2330907 - 2331002
Alignment:
Q  13 aatattttccttgtagagtagaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcgaaataaaattatggcttgaataggtt 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2330907 aatattttccttgtaaagtagaatgtggattttggttcctttggatcagtccatgaaaattcctcaatcgaaataaaattatggcttgaataggtt 2331002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 36887056 - 36887016
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36887056 atctatatactaataagaaaagaaatgtcccttgaatttac 36887016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 318
Target Start/End: Complemental strand, 17643473 - 17643434
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaattta 318  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  17643473 atctatatactaataagaaaataaatgtcccttgaattta 17643434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 8528192 - 8528151
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8528192 aatctatatactaataagaaaagaaatgtcccttgaatttac 8528151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 29530650 - 29530609
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29530650 aatctatatactaataagaaaagaaatgtcccttgaatttac 29530609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 26102235 - 26102198
Alignment:
Q  282 tatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26102235 tatatactaataagaaaagaaatgtcctttgaatttac 26102198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 319
Target Start/End: Original strand, 35855209 - 35855243
Alignment:
Q  285 atactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||| |||||||    
T  35855209 atactaataagaaaagaaatgtcccttaaatttac 35855243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 24053913 - 24053953
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttac 24053953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 36776403 - 36776443
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36776403 atctatatactaataagaaaagaaatgtcccttgaatttac 36776443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 319
Target Start/End: Original strand, 9472158 - 9472191
Alignment:
Q  286 tactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||| ||||    
T  9472158 tactaataagaaaagaaatgtcccttgaaattac 9472191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 41152667 - 41152707
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  41152667 atctatatacttatataaaaagaaatgtcccttgaatttac 41152707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 10876657 - 10876617
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttac 10876617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 318
Target Start/End: Original strand, 42781020 - 42781049
Alignment:
Q  289 taataagaaaagaaatgtcccttgaattta 318  Q
    ||||||||||||||||||||||||||||||    
T  42781020 taataagaaaagaaatgtcccttgaattta 42781049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 319
Target Start/End: Original strand, 19486200 - 19486228
Alignment:
Q  291 ataagaaaagaaatgtcccttgaatttac 319  Q
    |||||||||||||||||||||||||||||    
T  19486200 ataagaaaagaaatgtcccttgaatttac 19486228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 7857095 - 7857056
Alignment:
Q  280 tctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7857095 tctatatactaataagaaaagaaatgtcccttgaatttac 7857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 44804520 - 44804559
Alignment:
Q  280 tctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttac 44804559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 39276612 - 39276652
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  39276612 atctatatacttatattaaaagaaatgtcccttgaatttac 39276652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 108549 - 108586
Alignment:
Q  282 tatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||    
T  108549 tatatactaataagaaaagaaatgtcccttgaatttac 108586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 46626409 - 46626372
Alignment:
Q  282 tatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46626409 tatatactaataagaaaagaaatgtcccttgaatttac 46626372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 19322432 - 19322392
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttac 19322392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 22198996 - 22198956
Alignment:
Q  278 aatctatatactaataagaaaagaaatgtcccttgaattta 318  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  22198996 aatctatatacttatattaaaagaaatgtcccttgaattta 22198956  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 38894754 - 38894794
Alignment:
Q  279 atctatatactaataagaaaagaaatgtcccttgaatttac 319  Q
    ||||||||||||||||||||  |||||||| ||||||||||    
T  38894754 atctatatactaataagaaagtaaatgtccattgaatttac 38894794  T

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