View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3970_low_3 (Length: 556)

Name: NF3970_low_3
Description: NF3970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3970_low_3
NF3970_low_3
[»] chr5 (54 HSPs)
chr5 (247-548)||(31569754-31570054)
chr5 (18-270)||(31570065-31570317)
chr5 (318-392)||(18817588-18817662)
chr5 (318-397)||(18816950-18817029)
chr5 (319-397)||(11351405-11351483)
chr5 (318-392)||(19514940-19515014)
chr5 (318-395)||(21207226-21207303)
chr5 (318-397)||(12498565-12498644)
chr5 (318-397)||(26570727-26570806)
chr5 (318-397)||(26571141-26571220)
chr5 (318-397)||(43464169-43464247)
chr5 (343-397)||(25116063-25116117)
chr5 (343-397)||(25175153-25175207)
chr5 (318-392)||(34147487-34147561)
chr5 (343-392)||(18433318-18433367)
chr5 (319-398)||(10098919-10098997)
chr5 (318-397)||(12498905-12498984)
chr5 (333-392)||(18433018-18433077)
chr5 (318-396)||(2817148-2817226)
chr5 (318-392)||(11350811-11350884)
chr5 (343-397)||(25115755-25115809)
chr5 (343-397)||(25174847-25174901)
chr5 (318-392)||(37780719-37780793)
chr5 (343-397)||(41382891-41382944)
chr5 (341-389)||(16726084-16726132)
chr5 (333-392)||(26020453-26020512)
chr5 (318-392)||(3888242-3888316)
chr5 (318-396)||(3888639-3888717)
chr5 (318-392)||(22729011-22729084)
chr5 (318-392)||(22729417-22729490)
chr5 (343-397)||(33324840-33324894)
chr5 (318-396)||(43463755-43463832)
chr5 (347-394)||(12441196-12441244)
chr5 (345-397)||(16466746-16466798)
chr5 (333-397)||(22428932-22428995)
chr5 (318-392)||(19514528-19514603)
chr5 (318-381)||(37610595-37610658)
chr5 (343-397)||(5187832-5187886)
chr5 (318-392)||(10098522-10098596)
chr5 (318-392)||(25940524-25940598)
chr5 (318-392)||(25940991-25941065)
chr5 (333-395)||(34576867-34576928)
chr5 (318-392)||(37610205-37610278)
chr5 (318-392)||(37780323-37780396)
chr5 (318-376)||(42919323-42919381)
chr5 (333-397)||(22429188-22429251)
chr5 (333-395)||(22629516-22629579)
chr5 (343-394)||(23011384-23011434)
chr5 (318-397)||(41072191-41072269)
chr5 (333-394)||(9665558-9665617)
chr5 (343-396)||(9869559-9869610)
chr5 (318-396)||(11316951-11317029)
chr5 (345-394)||(23011261-23011311)
chr5 (343-394)||(9869740-9869792)
[»] chr3 (62 HSPs)
chr3 (24-270)||(1927938-1928183)
chr3 (247-315)||(1927859-1927927)
chr3 (318-406)||(1928411-1928498)
chr3 (318-392)||(8314016-8314090)
chr3 (318-404)||(48159888-48159974)
chr3 (319-392)||(53687891-53687964)
chr3 (319-397)||(47665909-47665987)
chr3 (343-392)||(10293911-10293960)
chr3 (343-392)||(20969021-20969070)
chr3 (318-395)||(27238877-27238954)
chr3 (318-395)||(53766163-53766240)
chr3 (318-398)||(3353528-3353607)
chr3 (318-397)||(26007596-26007675)
chr3 (318-392)||(26007185-26007258)
chr3 (318-392)||(42673273-42673346)
chr3 (318-392)||(48160310-48160384)
chr3 (343-392)||(20968721-20968770)
chr3 (320-392)||(3353131-3353202)
chr3 (318-398)||(40848938-40849018)
chr3 (346-397)||(42455788-42455839)
chr3 (343-397)||(8315084-8315137)
chr3 (318-376)||(21896488-21896546)
chr3 (318-392)||(22429161-22429235)
chr3 (318-392)||(22429573-22429646)
chr3 (319-397)||(36180968-36181046)
chr3 (318-392)||(47666312-47666386)
chr3 (343-392)||(1927775-1927824)
chr3 (343-392)||(10293611-10293660)
chr3 (343-391)||(4947263-4947311)
chr3 (341-397)||(14015692-14015748)
chr3 (343-390)||(18874887-18874934)
chr3 (318-397)||(27238463-27238542)
chr3 (343-398)||(45060873-45060928)
chr3 (318-392)||(10348776-10348850)
chr3 (318-392)||(40848524-40848597)
chr3 (318-392)||(42672981-42673054)
chr3 (343-392)||(3644785-3644834)
chr3 (343-404)||(9026727-9026787)
chr3 (343-392)||(18875193-18875242)
chr3 (343-392)||(47871124-47871172)
chr3 (343-394)||(1101092-1101143)
chr3 (319-375)||(10771523-10771579)
chr3 (343-394)||(13657623-13657675)
chr3 (344-394)||(14015873-14015925)
chr3 (344-392)||(17441066-17441114)
chr3 (343-395)||(23630037-23630089)
chr3 (317-392)||(36180559-36180632)
chr3 (334-397)||(14015957-14016019)
chr3 (333-392)||(17372301-17372360)
chr3 (318-373)||(28702299-28702354)
chr3 (318-392)||(10348482-10348556)
chr3 (341-390)||(18875017-18875067)
chr3 (318-392)||(24485437-24485510)
chr3 (343-393)||(26540693-26540742)
chr3 (318-392)||(44007970-44008044)
chr3 (343-392)||(1100918-1100967)
chr3 (333-397)||(21895655-21895720)
chr3 (347-392)||(45060599-45060644)
chr3 (343-392)||(53766581-53766630)
chr3 (343-390)||(10293735-10293783)
chr3 (343-394)||(17372475-17372527)
chr3 (318-362)||(42456172-42456216)
[»] chr8 (60 HSPs)
chr8 (318-398)||(13937366-13937446)
chr8 (318-397)||(13026633-13026712)
chr8 (318-395)||(13027258-13027335)
chr8 (318-392)||(9822751-9822825)
chr8 (318-392)||(9823338-9823412)
chr8 (318-392)||(22851393-22851467)
chr8 (318-392)||(39724025-39724099)
chr8 (343-392)||(15156187-15156236)
chr8 (318-395)||(34498122-34498199)
chr8 (341-392)||(12281127-12281178)
chr8 (318-392)||(3307341-3307415)
chr8 (318-392)||(13936726-13936799)
chr8 (343-397)||(15155881-15155935)
chr8 (318-392)||(17431290-17431364)
chr8 (318-392)||(41662524-41662598)
chr8 (343-392)||(765737-765786)
chr8 (343-392)||(37752418-37752467)
chr8 (343-392)||(41662405-41662454)
chr8 (333-392)||(23123341-23123400)
chr8 (318-397)||(37396706-37396785)
chr8 (318-392)||(15442766-15442840)
chr8 (319-397)||(15444625-15444703)
chr8 (318-396)||(25439103-25439180)
chr8 (343-392)||(12281428-12281477)
chr8 (318-382)||(39723415-39723479)
chr8 (318-397)||(15042143-15042222)
chr8 (333-392)||(37752087-37752146)
chr8 (343-397)||(16928940-16928994)
chr8 (318-392)||(24473745-24473819)
chr8 (326-392)||(37397130-37397196)
chr8 (343-392)||(16929244-16929293)
chr8 (343-392)||(25438795-25438844)
chr8 (343-392)||(43245874-43245923)
chr8 (343-392)||(43246178-43246227)
chr8 (329-397)||(34498543-34498611)
chr8 (343-391)||(43162541-43162588)
chr8 (344-394)||(74864-74915)
chr8 (318-397)||(6199073-6199152)
chr8 (341-392)||(43162237-43162287)
chr8 (331-377)||(6092793-6092839)
chr8 (318-392)||(20861615-20861689)
chr8 (343-397)||(22786838-22786892)
chr8 (318-392)||(24473346-24473420)
chr8 (343-392)||(34313768-34313815)
chr8 (343-392)||(3463947-3463996)
chr8 (343-392)||(41662110-41662159)
chr8 (343-394)||(22786934-22786986)
chr8 (346-394)||(37669956-37670004)
chr8 (341-392)||(22851956-22852007)
chr8 (326-392)||(9623505-9623571)
chr8 (318-392)||(16169584-16169658)
chr8 (343-392)||(18020090-18020137)
chr8 (318-396)||(33727082-33727160)
chr8 (343-392)||(74689-74737)
chr8 (345-394)||(9930662-9930710)
chr8 (344-381)||(9930842-9930879)
chr8 (342-394)||(11007655-11007708)
chr8 (348-392)||(9465610-9465653)
chr8 (343-375)||(9465876-9465908)
chr8 (343-390)||(18019915-18019963)
[»] chr6 (34 HSPs)
chr6 (318-404)||(33829613-33829699)
chr6 (318-392)||(33828993-33829067)
chr6 (318-392)||(7654525-7654599)
chr6 (343-409)||(3403991-3404059)
chr6 (343-392)||(18241857-18241906)
chr6 (341-397)||(21032280-21032336)
chr6 (334-392)||(3403720-3403778)
chr6 (318-392)||(10087835-10087909)
chr6 (318-392)||(33974276-33974350)
chr6 (318-395)||(32733973-32734050)
chr6 (345-396)||(31598732-31598782)
chr6 (345-395)||(12714431-12714481)
chr6 (318-392)||(22755066-22755140)
chr6 (343-397)||(30388364-30388418)
chr6 (343-394)||(21032101-21032153)
chr6 (343-397)||(10039674-10039727)
chr6 (343-392)||(11656784-11656833)
chr6 (348-391)||(31598157-31598201)
chr6 (348-391)||(31598641-31598685)
chr6 (345-392)||(30388065-30388111)
chr6 (326-392)||(2354795-2354861)
chr6 (318-388)||(13177033-13177102)
chr6 (319-381)||(29074350-29074412)
chr6 (319-381)||(29079114-29079176)
chr6 (319-381)||(29106923-29106985)
chr6 (343-392)||(3825530-3825578)
chr6 (343-392)||(18242158-18242207)
chr6 (343-392)||(21031982-21032030)
chr6 (343-392)||(23250595-23250643)
chr6 (343-390)||(2762611-2762659)
chr6 (343-390)||(10039845-10039893)
chr6 (343-390)||(11656608-11656656)
chr6 (343-390)||(18242034-18242082)
chr6 (339-394)||(23250768-23250823)
[»] chr1 (71 HSPs)
chr1 (318-392)||(39691977-39692051)
chr1 (318-392)||(6002240-6002314)
chr1 (318-392)||(49284412-49284486)
chr1 (318-398)||(28634134-28634214)
chr1 (318-392)||(6002871-6002945)
chr1 (318-396)||(42611184-42611262)
chr1 (318-396)||(48104677-48104755)
chr1 (318-395)||(42611591-42611668)
chr1 (318-395)||(50430058-50430135)
chr1 (343-398)||(8108718-8108773)
chr1 (333-392)||(8108985-8109044)
chr1 (341-396)||(22149699-22149754)
chr1 (318-397)||(26815096-26815175)
chr1 (318-397)||(32163020-32163099)
chr1 (318-392)||(9347129-9347203)
chr1 (318-392)||(26814697-26814771)
chr1 (318-395)||(46823843-46823920)
chr1 (343-392)||(47955309-47955358)
chr1 (334-410)||(48191348-48191424)
chr1 (343-394)||(1176837-1176888)
chr1 (318-397)||(44911023-44911102)
chr1 (333-392)||(48190774-48190833)
chr1 (318-396)||(999111-999188)
chr1 (318-392)||(13918844-13918918)
chr1 (318-392)||(20480171-20480244)
chr1 (318-392)||(21687028-21687102)
chr1 (343-397)||(47955610-47955664)
chr1 (318-392)||(48105093-48105167)
chr1 (318-392)||(50526449-50526523)
chr1 (318-391)||(50949542-50949615)
chr1 (318-398)||(28633717-28633797)
chr1 (318-397)||(6703458-6703537)
chr1 (343-398)||(31848194-31848249)
chr1 (318-392)||(6703871-6703945)
chr1 (318-404)||(9347528-9347613)
chr1 (318-392)||(13918449-13918523)
chr1 (318-392)||(27172119-27172192)
chr1 (318-392)||(27172518-27172592)
chr1 (318-372)||(49285032-49285086)
chr1 (346-392)||(50615243-50615289)
chr1 (318-392)||(50615598-50615671)
chr1 (346-392)||(50623071-50623117)
chr1 (318-392)||(50623426-50623499)
chr1 (319-392)||(4692411-4692484)
chr1 (343-392)||(17518604-17518652)
chr1 (319-395)||(50949161-50949237)
chr1 (318-392)||(20371043-20371115)
chr1 (345-392)||(41082912-41082959)
chr1 (343-398)||(41083213-41083267)
chr1 (318-397)||(44911414-44911493)
chr1 (343-397)||(1177020-1177074)
chr1 (343-397)||(19008752-19008806)
chr1 (318-392)||(46824255-46824329)
chr1 (318-392)||(50429659-50429733)
chr1 (343-392)||(13589661-13589709)
chr1 (319-392)||(21687445-21687517)
chr1 (335-392)||(33085674-33085731)
chr1 (318-398)||(999502-999581)
chr1 (320-392)||(20480591-20480662)
chr1 (345-396)||(31847894-31847945)
chr1 (343-397)||(17518301-17518354)
chr1 (346-408)||(19007722-19007783)
chr1 (345-394)||(31848017-31848067)
chr1 (343-397)||(39690792-39690846)
chr1 (338-392)||(47498492-47498545)
chr1 (318-392)||(49318143-49318216)
chr1 (343-392)||(20371355-20371403)
chr1 (343-392)||(22149406-22149453)
chr1 (342-394)||(22149579-22149632)
chr1 (319-392)||(49317755-49317827)
chr1 (319-392)||(49318421-49318493)
[»] chr4 (66 HSPs)
chr4 (318-395)||(36096452-36096529)
chr4 (318-398)||(50678776-50678856)
chr4 (318-396)||(43050606-43050684)
chr4 (318-392)||(36095820-36095894)
chr4 (318-392)||(50679401-50679475)
chr4 (318-397)||(39744442-39744521)
chr4 (318-397)||(45830173-45830252)
chr4 (331-398)||(56505690-56505757)
chr4 (318-392)||(43051229-43051303)
chr4 (318-397)||(9023242-9023321)
chr4 (318-397)||(28196344-28196423)
chr4 (318-392)||(169416-169490)
chr4 (318-392)||(293194-293268)
chr4 (318-392)||(9023657-9023731)
chr4 (334-392)||(24775776-24775834)
chr4 (318-392)||(25161881-25161955)
chr4 (318-392)||(28196750-28196824)
chr4 (318-392)||(32703627-32703701)
chr4 (319-397)||(47219179-47219257)
chr4 (343-392)||(13198908-13198957)
chr4 (318-398)||(9380718-9380798)
chr4 (318-397)||(292780-292859)
chr4 (318-392)||(4239343-4239417)
chr4 (318-392)||(9380310-9380384)
chr4 (318-392)||(11529171-11529245)
chr4 (343-397)||(16555513-16555567)
chr4 (318-392)||(43292040-43292114)
chr4 (343-392)||(22681578-22681626)
chr4 (319-392)||(23540230-23540303)
chr4 (318-406)||(32703214-32703302)
chr4 (343-391)||(49178818-49178866)
chr4 (318-392)||(169016-169091)
chr4 (333-392)||(16555809-16555868)
chr4 (343-398)||(22681881-22681936)
chr4 (318-392)||(26207723-26207797)
chr4 (318-392)||(39086600-39086674)
chr4 (318-398)||(56506551-56506631)
chr4 (334-397)||(5205986-5206049)
chr4 (345-392)||(11241392-11241439)
chr4 (343-394)||(13198604-13198655)
chr4 (318-397)||(39744028-39744107)
chr4 (318-377)||(44468900-44468959)
chr4 (343-397)||(3930482-3930535)
chr4 (343-392)||(8181994-8182044)
chr4 (318-396)||(12757766-12757843)
chr4 (318-392)||(26207364-26207437)
chr4 (318-392)||(43292334-43292408)
chr4 (343-392)||(5206232-5206280)
chr4 (343-392)||(18077204-18077253)
chr4 (330-398)||(23432473-23432542)
chr4 (318-395)||(48406362-48406438)
chr4 (333-397)||(11241653-11241716)
chr4 (347-394)||(24775642-24775690)
chr4 (343-390)||(49178644-49178692)
chr4 (318-377)||(25162290-25162349)
chr4 (318-392)||(45828997-45829071)
chr4 (318-392)||(48405965-48406038)
chr4 (342-390)||(16555694-16555743)
chr4 (318-398)||(23539838-23539916)
chr4 (343-392)||(25225400-25225449)
chr4 (286-315)||(36095934-36095963)
chr4 (318-363)||(39912464-39912509)
chr4 (343-392)||(54508818-54508867)
chr4 (344-392)||(7603422-7603469)
chr4 (343-390)||(27304895-27304943)
chr4 (343-407)||(35393778-35393841)
[»] chr2 (58 HSPs)
chr2 (318-398)||(2639459-2639539)
chr2 (318-397)||(26841585-26841664)
chr2 (318-393)||(7591203-7591278)
chr2 (318-392)||(18296079-18296153)
chr2 (318-392)||(26842215-26842289)
chr2 (318-405)||(7664238-7664325)
chr2 (318-392)||(2638823-2638897)
chr2 (318-392)||(7591827-7591901)
chr2 (318-396)||(8851147-8851225)
chr2 (318-392)||(8851559-8851633)
chr2 (343-404)||(30190914-30190975)
chr2 (318-392)||(7664650-7664724)
chr2 (318-396)||(26692395-26692473)
chr2 (318-392)||(37720207-37720281)
chr2 (341-406)||(6495721-6495786)
chr2 (343-392)||(20347466-20347515)
chr2 (318-395)||(26692797-26692874)
chr2 (333-392)||(18296685-18296744)
chr2 (333-392)||(24832334-24832393)
chr2 (318-397)||(41790889-41790968)
chr2 (318-392)||(6325324-6325398)
chr2 (343-392)||(6171458-6171507)
chr2 (343-392)||(11883626-11883675)
chr2 (343-392)||(11883928-11883977)
chr2 (334-395)||(18055309-18055370)
chr2 (343-392)||(30191227-30191276)
chr2 (343-396)||(40469731-40469784)
chr2 (343-394)||(15920779-15920830)
chr2 (343-398)||(20347160-20347215)
chr2 (343-397)||(5378659-5378713)
chr2 (342-392)||(6171159-6171208)
chr2 (318-388)||(6324924-6324994)
chr2 (318-392)||(16910830-16910904)
chr2 (318-392)||(17850981-17851054)
chr2 (318-392)||(18750103-18750176)
chr2 (343-397)||(29230280-29230334)
chr2 (343-393)||(29343583-29343633)
chr2 (343-396)||(32673145-32673197)
chr2 (318-395)||(41790491-41790567)
chr2 (343-403)||(5379961-5380021)
chr2 (343-394)||(43495486-43495537)
chr2 (318-396)||(5793446-5793524)
chr2 (318-392)||(16911246-16911319)
chr2 (318-392)||(38490818-38490891)
chr2 (343-392)||(6495470-6495518)
chr2 (343-392)||(26737783-26737832)
chr2 (343-394)||(15321513-15321564)
chr2 (326-392)||(19141447-19141512)
chr2 (318-395)||(19141826-19141901)
chr2 (318-367)||(7979593-7979642)
chr2 (343-392)||(32672845-32672894)
chr2 (343-392)||(40469430-40469479)
chr2 (342-390)||(40469606-40469655)
chr2 (343-390)||(6171335-6171383)
chr2 (345-392)||(15321395-15321440)
chr2 (343-394)||(18055167-18055219)
chr2 (343-390)||(26737658-26737706)
chr2 (348-392)||(43495312-43495356)
[»] chr7 (60 HSPs)
chr7 (318-392)||(44599492-44599566)
chr7 (318-392)||(44600112-44600186)
chr7 (318-397)||(13863311-13863390)
chr7 (318-395)||(18863967-18864044)
chr7 (318-397)||(20418886-20418965)
chr7 (318-392)||(20419301-20419375)
chr7 (318-392)||(22740159-22740233)
chr7 (318-404)||(37889236-37889322)
chr7 (318-397)||(8643743-8643822)
chr7 (318-397)||(10533032-10533111)
chr7 (318-392)||(3205070-3205144)
chr7 (318-392)||(9035270-9035344)
chr7 (343-397)||(9412327-9412381)
chr7 (318-392)||(13863934-13864007)
chr7 (318-392)||(17156970-17157044)
chr7 (318-392)||(37888836-37888910)
chr7 (318-392)||(37972373-37972447)
chr7 (343-392)||(3687658-3687707)
chr7 (327-392)||(38826899-38826964)
chr7 (318-394)||(22740568-22740643)
chr7 (318-397)||(46816288-46816367)
chr7 (318-392)||(13744210-13744283)
chr7 (343-392)||(9412026-9412075)
chr7 (319-392)||(48359323-48359395)
chr7 (345-405)||(27096346-27096405)
chr7 (345-405)||(27181898-27181957)
chr7 (318-397)||(37971958-37972037)
chr7 (343-392)||(3687356-3687406)
chr7 (318-392)||(13741560-13741634)
chr7 (318-392)||(29292925-29292999)
chr7 (343-392)||(13772903-13772952)
chr7 (333-404)||(15567266-15567334)
chr7 (327-396)||(36527383-36527451)
chr7 (318-397)||(9034865-9034945)
chr7 (334-397)||(13772639-13772702)
chr7 (318-397)||(18864379-18864457)
chr7 (332-392)||(5349724-5349781)
chr7 (347-393)||(5735553-5735599)
chr7 (343-397)||(6908211-6908264)
chr7 (347-397)||(23686723-23686773)
chr7 (318-392)||(29293323-29293397)
chr7 (326-402)||(3204662-3204736)
chr7 (343-404)||(6908486-6908546)
chr7 (343-392)||(8953891-8953939)
chr7 (318-398)||(42419005-42419085)
chr7 (344-392)||(5735255-5735303)
chr7 (345-404)||(38191253-38191312)
chr7 (342-392)||(18925065-18925115)
chr7 (344-396)||(8953601-8953651)
chr7 (343-391)||(18925231-18925280)
chr7 (345-393)||(27096167-27096216)
chr7 (345-393)||(27182087-27182136)
chr7 (343-392)||(29291809-29291858)
chr7 (343-392)||(30857906-30857955)
chr7 (343-392)||(38191567-38191616)
chr7 (343-392)||(39983702-39983751)
chr7 (343-394)||(5735376-5735428)
chr7 (334-390)||(33628653-33628709)
chr7 (343-394)||(34235857-34235909)
chr7 (333-377)||(35080215-35080259)
[»] scaffold0328 (2 HSPs)
scaffold0328 (318-392)||(6772-6846)
scaffold0328 (318-392)||(6155-6229)
[»] scaffold0460 (2 HSPs)
scaffold0460 (318-392)||(333-407)
scaffold0460 (318-392)||(740-813)
[»] scaffold0017 (2 HSPs)
scaffold0017 (318-392)||(185251-185325)
scaffold0017 (318-392)||(184842-184916)
[»] scaffold0802 (2 HSPs)
scaffold0802 (343-392)||(1121-1170)
scaffold0802 (343-392)||(1422-1471)
[»] scaffold0319 (2 HSPs)
scaffold0319 (343-392)||(6397-6446)
scaffold0319 (343-392)||(6699-6747)
[»] scaffold0192 (1 HSPs)
scaffold0192 (343-392)||(25371-25420)
[»] scaffold0001 (5 HSPs)
scaffold0001 (343-392)||(438933-438982)
scaffold0001 (343-395)||(183364-183415)
scaffold0001 (345-397)||(439203-439255)
scaffold0001 (349-392)||(183670-183713)
scaffold0001 (345-394)||(183544-183594)
[»] scaffold0598 (2 HSPs)
scaffold0598 (341-392)||(6610-6661)
scaffold0598 (343-392)||(6878-6925)
[»] scaffold1221 (1 HSPs)
scaffold1221 (341-395)||(1784-1837)
[»] scaffold0110 (2 HSPs)
scaffold0110 (343-397)||(45809-45862)
scaffold0110 (344-392)||(45540-45587)
[»] scaffold0176 (2 HSPs)
scaffold0176 (329-398)||(20031-20100)
scaffold0176 (318-392)||(19624-19697)
[»] scaffold0002 (1 HSPs)
scaffold0002 (343-392)||(411926-411974)
[»] scaffold0535 (1 HSPs)
scaffold0535 (345-392)||(10015-10062)
[»] scaffold0069 (2 HSPs)
scaffold0069 (318-392)||(50078-50150)
scaffold0069 (343-392)||(50509-50557)
[»] scaffold0041 (1 HSPs)
scaffold0041 (318-392)||(38672-38746)
[»] scaffold0035 (1 HSPs)
scaffold0035 (343-394)||(73087-73139)
[»] scaffold0029 (1 HSPs)
scaffold0029 (318-392)||(9908-9983)
[»] scaffold0015 (1 HSPs)
scaffold0015 (343-392)||(17158-17206)


Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 247 - 548
Target Start/End: Complemental strand, 31570054 - 31569754
Alignment:
Q  247 ttttaggtttttcatattacattgcatgcacatcaaattaaaatcagacacatcatcactaaaatacatttcaaaatcactcgtttaaaaacatgaggtg 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31570054 ttttaggtttttcatattacattgcatgcacatcaaattaaaatcagacacatcatcactaaaatacatttcaaaatcactcgtttaaaaacatgaggtg 31569955  T
Q  347 caaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttattagataaatatttgattcttctttcataaacaataatctc 446  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31569954 caaaatcgcacaattgacaaaagataggggg-aaaagtgcaattaaacctatctttttattagataaatatttgattcttctttcataaacaataatctc 31569856  T
Q  447 aaaaagcatgtattactttaaacatttcaaaatttgatgattagtccactgaagtaaaattaaacaagagaaaagacgaaaagatcacacaacagtatta 546  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31569855 aaaaagtatgtattactttaaacatttcaaaatttgatgattagtccactgaagtaaaattaaacaagagaaaagacgaaaagatcacacaacaatatta 31569756  T
Q  547 tc 548  Q
    ||    
T  31569755 tc 31569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 31570317 - 31570065
Alignment:
Q  18 attcctttggacttcatctctactatttttcttctttaatcatgatcctctgaactggctcaagctttagttcatttctcacaattccaacatattcgag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31570317 attcctttggacttcatctctactatttttcttctttaatcatgatcctctgaactggctcaagctttagttcatttctcacaattccaacatattcgag 31570218  T
Q  118 atacaagaactttgggtgtggtggtctctgataaaaacaggaaactctagctgctttactatcactactatgatagaaagaaggttgagattatcctcca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31570217 atacaagaactttgggtgtggtggtctctgataaaaacaggaaactctagctgctttactatcactactatgatagaaagaaggttgagattatcctcca 31570118  T
Q  218 cctcttgtcatgaaagcttgcaatttgaattttaggtttttcatattacattg 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31570117 cctcttgtcatgaaagcttgcaatttgaattttaggtttttcatattacattg 31570065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 18817588 - 18817662
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  18817588 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18817662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 18817029 - 18816950
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||    
T  18817029 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 11351405 - 11351483
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 19514940 - 19515014
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| ||||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  19514940 caaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 21207303 - 21207226
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  21207303 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 21207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 12498644 - 12498565
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  12498644 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 26570806 - 26570727
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||| |||||| ||||    
T  26570806 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 26571141 - 26571220
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  26571141 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 43464169 - 43464247
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  43464169 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 25116063 - 25116117
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  25116063 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 25175153 - 25175207
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  25175153 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 34147487 - 34147561
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  | |||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  34147487 caaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18433318 - 18433367
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18433318 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18433367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 319 - 398
Target Start/End: Original strand, 10098919 - 10098997
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| || ||||||||||||||||||||||    
T  10098919 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggaggaaaagtgcaattaaacctat 10098997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 12498905 - 12498984
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| || ||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  12498905 caaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 18433077 - 18433018
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  18433077 aaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 18433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 2817226 - 2817148
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  2817226 caaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacct 2817148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 11350884 - 11350811
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||| ||| |||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  11350884 caaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaa 11350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 25115809 - 25115755
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  25115809 ggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 25174901 - 25174847
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  25174901 ggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 37780719 - 37780793
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  |||||||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  37780719 caaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaa 37780793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 41382944 - 41382891
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  41382944 ggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaaccta 41382891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 341 - 389
Target Start/End: Complemental strand, 16726132 - 16726084
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaat 389  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  16726132 gaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 26020512 - 26020453
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  26020512 aaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaa 26020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 3888316 - 3888242
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||| ||||||| ||||  |||||||||||| ||||||||||    
T  3888316 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaa 3888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 3888639 - 3888717
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||| ||||||| ||||  ||| | |||||||||||||||||||||    
T  3888639 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaaacct 3888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 22729084 - 22729011
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  |||| |||||||||||||||||| |||||  ||| |||||||||||||||||||    
T  22729084 caaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactata-gggggaaaagtgcaattaa 22729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 22729417 - 22729490
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  22729417 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattata-gggggaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 33324840 - 33324894
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||    
T  33324840 ggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 43463832 - 43463755
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||  ||||||||||||||||||||||    
T  43463832 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-aggggaaaagtgcaattaaacct 43463755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 394
Target Start/End: Original strand, 12441196 - 12441244
Alignment:
Q  347 caaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaac 12441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 16466746 - 16466798
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||| ||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 22428995 - 22428932
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||| ||| |||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  22428995 aaaaagatggggtgcaaaatcgcacaattagcaaaagatagggggg-aaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 19514603 - 19514528
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagata-ggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| |||||| |||||||||||||    
T  19514603 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaa 19514528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 381
Target Start/End: Original strand, 37610595 - 37610658
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaa 381  Q
    ||||||| |||||||||||  |||||||||||||||||||||||  ||||  ||||||||||||    
T  37610595 caaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaa 37610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 5187832 - 5187886
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||| |||||||| |||||||||| |||| |||||||||||||| ||||    
T  5187832 ggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagccta 5187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 10098596 - 10098522
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||  | |||||||||||||||||||||||  ||||| || ||||||||||||||    
T  10098596 caaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 10098522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 25940598 - 25940524
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||  |||||||||||||||||||||||||  |||||||  |||| |||||||||    
T  25940598 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaa 25940524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 25940991 - 25941065
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| | |||||||||||| |||| |||||  ||||| |||||||||||||||||    
T  25940991 caaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaa 25941065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 34576928 - 34576867
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||| ||| |||| ||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  34576928 aaaaagatggggtgtaaaatcgcacaattagcaaaagatagggggg-aaagtgcaattaaacc 34576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 37610278 - 37610205
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||| ||||  ||| |||||||||||||||||||    
T  37610278 caaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaa 37610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 37780396 - 37780323
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| ||||||||||| |||||||| ||||  ||| |||||||||||||||||||    
T  37780396 caaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactata-gggggaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 42919381 - 42919323
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggg 376  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||  |||| |||||||    
T  42919381 caaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatatagggg 42919323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 22429188 - 22429251
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||| ||| |||||||||||||||||||  ||||||||| ||||||||| ||||||||| ||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaagata-gggggaaaaatgcaattaagccta 22429251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 22629516 - 22629579
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagatagg-ggggaaaagtgcaattaaacc 395  Q
    ||||| ||| ||||||||||  || ||||||||||||||||| ||| |||||||||||||||||    
T  22629516 aaaaaaatggggtgcaaaattacataattgacaaaagataggagggaaaaagtgcaattaaacc 22629579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 23011384 - 23011434
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||| ||||||||||  ||| ||||||||||||||||    
T  23011384 ggtgcaaaatcgcacaattaacaaaagata-agggaaaaagtgcaattaaac 23011434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 41072191 - 41072269
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||  |||||||||||| ||||||||||||  ||| || ||||||||| |||||||||||    
T  41072191 caaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactata-ggaggaaaagtgtaattaaaccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 394
Target Start/End: Complemental strand, 9665617 - 9665558
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||| ||| |||||||||| ||||||||  |||||||||  ||||||||||||||||||||    
T  9665617 aaaaagatggggtgcaaaattgcacaattagcaaaagata--ggggaaaagtgcaattaaac 9665558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 9869610 - 9869559
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||||||||||||||  |||||  ||||| ||||||||||||||||||||    
T  9869610 ggtgcaaaatcgcacaattagcaaaa--tagggaggaaaagtgcaattaaacct 9869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 11316951 - 11317029
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||| ||||  | || ||  ||||||||||||||||||    
T  11316951 caaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaaacct 11317029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 23011261 - 23011311
Alignment:
Q  345 tgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||| | ||||||||||||| |||| |||||||||||    
T  23011261 tgcaaaatcgcacaattggctaaaagatagggggcaaaattgcaattaaac 23011311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 9869740 - 9869792
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||||  |||| || |||||| ||||||||||||||||    
T  9869740 ggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaac 9869792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 4e-98; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 24 - 270
Target Start/End: Complemental strand, 1928183 - 1927938
Alignment:
Q  24 ttggacttcatctctactatttttctt---ctttaatcatgatcctctgaactggctcaagctttagttcatttctcacaattccaacatattcgagata 120  Q
    |||||||||||||||||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1928183 ttggacttcatctctactgtttttttttttctttaatcatgatcctctgaactggctcaagctttagttcatttctcacaattccaacatatttgagata 1928084  T
Q  121 caagaactttgggtgtggtggtctctgataaaaacaggaaactctagctgctttactatcactactatgatagaaagaaggttgagattatcctccacct 220  Q
    || ||||||||||||||||   |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  1928083 caggaactttgggtgtggt---ctctgataaaaacaggaa-ctctagctgctttactaacactactatgatagaaagaagcttgcgattatcctccacct 1927988  T
Q  221 cttgtcatgaaagcttgcaatttgaattttaggtttttcatattacattg 270  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1927987 tttgtcatgaaagcttgcaatttgaattttaggtttttcatattacattg 1927938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 1927927 - 1927859
Alignment:
Q  247 ttttaggtttttcatattacattgcatgcacatcaaattaaaatcagacacatcatcactaaaatacat 315  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  1927927 ttttaggtttttcatattacattgcatgcacatcagattaaaatcaggcacatcatcactaaaatacat 1927859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 1928411 - 1928498
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttat 406  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||| ||||||||||||||  |||||||    
T  1928411 caaaaccactcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaaacctaattttttat 1928498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 8314090 - 8314016
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| | |||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  8314090 caaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaa 8314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 404
Target Start/End: Complemental strand, 48159974 - 48159888
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||| |||||    
T  48159974 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctattttttt 48159888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 53687964 - 53687891
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  53687964 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 47665987 - 47665909
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||  ||| |||| |||||||||||||| ||||    
T  47665987 aaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 10293911 - 10293960
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10293911 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 10293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 20969021 - 20969070
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20969021 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 27238877 - 27238954
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||| |||||||||||||||||||||    
T  27238877 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 27238954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 53766240 - 53766163
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||| || |||||||||||||||||    
T  53766240 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaacc 53766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 3353528 - 3353607
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||  |||||||||||||||||||||||| ||||  ||| ||||||||||||||| |||||||||    
T  3353528 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaactaaacctat 3353607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 26007596 - 26007675
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  |||| ||||||||||| ||||||| ||||  |||||||| |||||||||||||||||||    
T  26007596 caaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaaccta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 26007258 - 26007185
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  26007258 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaa 26007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 42673273 - 42673346
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  42673273 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 42673346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 48160310 - 48160384
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||| |||||||||||||    
T  48160310 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 20968770 - 20968721
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  20968770 ggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaa 20968721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 3353202 - 3353131
Alignment:
Q  320 aaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 3353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 40848938 - 40849018
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| || ||||||||  ||| |||||||||||||||||||| ||||  |||| |||||||||||||||||| |||||    
T  40848938 caaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcctat 40849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 397
Target Start/End: Complemental strand, 42455839 - 42455788
Alignment:
Q  346 gcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 8315084 - 8315137
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  8315084 ggtgcaaaatcgcacaattgacaaaatatagggggg-aaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 21896488 - 21896546
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagggg 376  Q
    ||||||| ||||| ||||| |||| |||||||||||||||||||||||||| |||||||    
T  21896488 caaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatatagggg 21896546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 22429235 - 22429161
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||  |||||||| ||||||||||| ||||| ||||||| |||||||||||||||    
T  22429235 caaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 22429573 - 22429646
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||| ||| |||||||||||||    
T  22429573 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggg-aaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 36180968 - 36181046
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||| |||||||||||  ||| ||| ||||||||||||||| |||||  |||||| |||||||||||||||| ||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 47666312 - 47666386
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  ||| |||||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  47666312 caaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 47666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 1927824 - 1927775
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  1927824 ggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaa 1927775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 10293660 - 10293611
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  10293660 ggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaa 10293611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 4947311 - 4947263
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 391  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  4947311 ggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 397
Target Start/End: Complemental strand, 14015748 - 14015692
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||| ||||||||||||||  ||  |||||||||||||||||||    
T  14015748 gaggtgcaaaatcgcacgattgacaaaagataaaggaaaaaagtgcaattaaaccta 14015692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 18874934 - 18874887
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||    
T  18874934 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 18874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 27238542 - 27238463
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||  |||||||||||||||||||| ||||  ||||| ||||||||| ||||||| ||||    
T  27238542 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 45060873 - 45060928
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||| ||||||||||||||  ||||||||||||| ||||||||||||||| |||||    
T  45060873 ggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagcctat 45060928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 10348776 - 10348850
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| | || ||||||||||||||    
T  10348776 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 40848597 - 40848524
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||| ||||||||||||||| ||||  ||| |||||||||||||||||||    
T  40848597 caaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 40848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 42673054 - 42672981
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||  ||||||||||  ||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  42673054 caaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 42672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 3644785 - 3644834
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  3644785 ggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaa 3644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 9026787 - 9026727
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    |||||||||| |||||||| |||||||||| || |||||| ||||||||||||||| |||||    
T  9026787 ggtgcaaaattgcacaattaacaaaagata-ggaggaaaaatgcaattaaacctattttttt 9026727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18875193 - 18875242
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||| ||||||  |||||||||||||| ||||||||||||||    
T  18875193 ggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaa 18875242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 47871124 - 47871172
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  47871124 ggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 47871172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 1101092 - 1101143
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  1101092 ggtgcaaaatcgcacaattgacaaaaagata-ggggcaaaagtgcaattaaac 1101143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 10771579 - 10771523
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggg 375  Q
    |||||| |||| |||||||||||  ||  ||||||||||||||||||||||||||||    
T  10771579 aaaatcgctcggttaaaaacatggagtaaaaaatcgcacaattgacaaaagataggg 10771523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 13657623 - 13657675
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  13657623 ggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaac 13657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 14015873 - 14015925
Alignment:
Q  344 gtgcaaaatcgcacaattgac-aaaagatagggggg-aaaagtgcaattaaac 394  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||||||    
T  14015873 gtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaac 14015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 17441066 - 17441114
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||| ||||||||||| | |||||| |||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaa 17441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 23630037 - 23630089
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    |||||||||||||||||||  ||||| ||||| || |||||||||||||||||    
T  23630037 ggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaaacc 23630089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 36180632 - 36180559
Alignment:
Q  317 tcaaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||| |||||||||||  ||| | |||||||||||||||||||||||  |||  ||||||| ||||||||||    
T  36180632 tcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata--ggggaaatgtgcaattaa 36180559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 14015957 - 14016019
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||| ||| |||||||||||||||||||  ||||||||| ||  ||||||||||||||||||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaagata-ggatgaaaagtgcaattaaaccta 14016019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 17372360 - 17372301
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| | |||||||||||||||||||  ||||| |||||||| ||| ||||||||||    
T  17372360 aaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaa 17372301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 28702354 - 28702299
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatag 373  Q
    |||||||||||  ||||||| |||  ||||||||||||| ||||||||||||||||    
T  28702354 caaaatcactcaattaaaaatatggagtgcaaaatcgcataattgacaaaagatag 28702299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 10348556 - 10348482
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| | |||||||| | ||||||||||||  ||| ||| |||||||||||||||    
T  10348556 caaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaa 10348482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 390
Target Start/End: Complemental strand, 18875067 - 18875017
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  18875067 gaggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 24485437 - 24485510
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  24485437 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaattaa 24485510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 26540742 - 26540693
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaa 393  Q
    |||||||||| ||||||||||||||| ||| |||| |||||||||||||||    
T  26540742 ggtgcaaaattgcacaattgacaaaaaata-ggggcaaaagtgcaattaaa 26540693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 44008044 - 44007970
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  || || |||||| | |||||||||| |||  |||||| ||||||||||||||||    
T  44008044 caaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 44007970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 1100967 - 1100918
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||| ||||||||||||||  |||||||||||| ||| ||||||||||||    
T  1100967 ggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaa 1100918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 21895720 - 21895655
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagatag-gggggaaaagtgcaattaaaccta 397  Q
    ||||| ||| ||||||||||| |||||||| ||||| |||| |||| |||||||||||||| ||||    
T  21895720 aaaaagatggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagccta 21895655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 45060644 - 45060599
Alignment:
Q  347 caaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||  |||||||||| ||||||||||||||||||    
T  45060644 caaaatcgcataattagcaaaagatagtggggaaaagtgcaattaa 45060599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 53766581 - 53766630
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||||||  ||||  |||||||||||||||||||||||    
T  53766581 ggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaa 53766630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 10293783 - 10293735
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  10293783 ggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 10293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 17372475 - 17372527
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||| | ||||||||||| | |||||||| |||||||    
T  17372475 ggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaac 17372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 42456172 - 42456216
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattg 362  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||    
T  42456172 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattg 42456216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 13937366 - 13937446
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  13937366 caaaatcactcgtttaaaaacatggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcctat 13937446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 13026712 - 13026633
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  13026712 caaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 13027258 - 13027335
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  13027258 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 13027335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 9822825 - 9822751
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  9822825 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaa 9822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 9823338 - 9823412
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9823338 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 9823412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 22851467 - 22851393
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22851467 caaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 22851393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 39724025 - 39724099
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  39724025 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 39724099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 15156187 - 15156236
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15156187 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 15156236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 34498199 - 34498122
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  34498199 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaacc 34498122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 12281178 - 12281127
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12281178 gaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 12281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 3307415 - 3307341
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| || ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  3307415 caaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaa 3307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 13936799 - 13936726
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  13936799 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatag-ggggaaaagtgcaattaa 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 15155935 - 15155881
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  15155935 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 17431364 - 17431290
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  |||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  17431364 caaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 41662598 - 41662524
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  |||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  41662598 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 41662524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 765786 - 765737
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  765786 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 765737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 37752418 - 37752467
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37752418 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 37752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 41662405 - 41662454
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41662405 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 41662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 23123400 - 23123341
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  23123400 aaaaagatggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 23123341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 37396785 - 37396706
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||| | ||||  ||||||||||||||||||||||| ||||    
T  37396785 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 15442840 - 15442766
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| | |||||||||||||| ||||||||||| |||||||| | ||| ||||||||||||| |||||||||    
T  15442840 caaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaa 15442766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 15444625 - 15444703
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||| |||||||||||  ||| ||||||||||||||||||||  |||  |||||||| |||||||||||||||||||    
T  15444625 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 25439103 - 25439180
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  25439103 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaaacct 25439180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 12281428 - 12281477
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12281428 ggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 12281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 39723479 - 39723415
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaa 382  Q
    ||||||| |||||||||||||||| | |||||||||||||||||| |||||||||| || |||||    
T  39723479 caaaatcgctcgtttaaaaacatgggatgcaaaatcgcacaattggcaaaagatagaggtgaaaa 39723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 15042222 - 15042143
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||| |||||||  ||  ||||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  15042222 caaaatcgctcatttaaaacaatagggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 37752146 - 37752087
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  37752146 aaaaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaa 37752087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 16928994 - 16928940
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  16928994 ggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagccta 16928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 24473745 - 24473819
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||  |||||||||||||||    
T  24473745 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 37397130 - 37397196
Alignment:
Q  326 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||  ||| || ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  37397130 ctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 16929244 - 16929293
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  16929244 ggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaa 16929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 25438844 - 25438795
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  25438844 ggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 43245923 - 43245874
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  43245923 ggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaa 43245874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 43246178 - 43246227
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  43246178 ggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaa 43246227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 34498543 - 34498611
Alignment:
Q  329 gtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||  ||| |||||||||||||||||||  ||||  ||||||||||||||||||||||| ||||    
T  34498543 gtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 43162541 - 43162588
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 391  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  43162541 ggtgcaaaatcgcacgattgacaaaagata-gggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 74864 - 74915
Alignment:
Q  344 gtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaac 74915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 6199073 - 6199152
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  ||||||  ||||||||||||||| ||||    
T  6199073 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 43162287 - 43162237
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  43162287 gaggtgcaaaatcgcacaattaacaaaatata-gggggaaaagtgcaattaa 43162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 6092839 - 6092793
Alignment:
Q  331 ttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg 377  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||    
T  6092839 ttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggg 6092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 20861615 - 20861689
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| || |  |||||||| |||| |||||||||    
T  20861615 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaa 20861689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 22786892 - 22786838
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||| |||||||   ||||||||||||| |||||||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaaccta 22786838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 24473420 - 24473346
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| ||||||||||| |||||||| ||||  |||||||| ||||||||||||||    
T  24473420 caaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaa 24473346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 34313815 - 34313768
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  34313815 ggtgcaaaatcgcacaattaacaaaagata--ggggaaaagtgcaattaa 34313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 3463947 - 3463996
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||||| |||||||||||||||||||||||    
T  3463947 ggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaa 3463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 41662159 - 41662110
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||||||| |||| ||| ||||||||||    
T  41662159 ggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaa 41662110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 22786986 - 22786934
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaa-agataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||    
T  22786986 ggtgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaac 22786934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 37670004 - 37669956
Alignment:
Q  346 gcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||| |||||||| |||||||||| || ||||||||||||||||||    
T  37670004 gcaaaattgcacaattaacaaaagataaggaggaaaagtgcaattaaac 37669956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 22851956 - 22852007
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||||| ||||||||||||  ||||| | |||||||    
T  22851956 gaggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaa 22852007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 9623571 - 9623505
Alignment:
Q  326 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||  ||| |||||||||||||||||||| ||||  |||| | | ||||||||||||||    
T  9623571 ctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaa 9623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 16169584 - 16169658
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  || || |||||| | |||||||||| |||  |||||| ||||||||||||||||    
T  16169584 caaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaa 16169658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18020090 - 18020137
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||  ||| ||||||||||||||    
T  18020090 ggtgcaaaatcgcacaattaacaaaagata--gggtaaaagtgcaattaa 18020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 396
Target Start/End: Original strand, 33727082 - 33727160
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||  ||||  |||  || |||||||| ||||||||||    
T  33727082 caaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaattaaacct 33727160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 74737 - 74689
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||| || |||||||||||||||||    
T  74737 ggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtgcaattaa 74689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 9930710 - 9930662
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  9930710 tgcaaaatcgcacaattgacaaaa-atataggggaaaaatgcaattaaac 9930662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 9930842 - 9930879
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaa 381  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  9930842 gtgcaaaatcgcacaattaacaaaagataagggggaaa 9930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 11007708 - 11007655
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    ||||| ||||||||||||||| ||||| ||||||| | ||||||||||||||||    
T  11007708 aggtgtaaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaac 11007655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 9465653 - 9465610
Alignment:
Q  348 aaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagata-ggaggaaaagtgcaattaa 9465610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 375
Target Start/End: Original strand, 9465876 - 9465908
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggg 375  Q
    ||||||||||||||||||| |||||||||||||    
T  9465876 ggtgcaaaatcgcacaattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 18019963 - 18019915
Alignment:
Q  343 ggtgcaaaatcgcacaatt-gacaaaagataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||| |  ||||||||||||| ||||||||||||    
T  18019963 ggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 33829613 - 33829699
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||    
T  33829613 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctatattttt 33829699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 33829067 - 33828993
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33829067 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 33828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 7654525 - 7654599
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||| ||||||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7654525 caaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 409
Target Start/End: Original strand, 3403991 - 3404059
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta--tctttttattag 409  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  3403991 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcctatttctttttattag 3404059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 18241906 - 18241857
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18241906 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18241857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 341 - 397
Target Start/End: Original strand, 21032280 - 21032336
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  21032280 gaggcgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 21032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 3403778 - 3403720
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 3403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 10087835 - 10087909
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  | |||||||||||||||||||||    
T  10087835 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 33974276 - 33974350
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||| |||||||||    
T  33974276 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 32733973 - 32734050
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  |||||| |||||||||||||||||||    
T  32733973 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacc 32734050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 396
Target Start/End: Original strand, 31598732 - 31598782
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaaacct 31598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 12714481 - 12714431
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaattcaacc 12714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 22755066 - 22755140
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||| ||||||||||  |||  ||||||||||||||||||    
T  22755066 caaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaa 22755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 30388364 - 30388418
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||  |||||||||||||| |||||| ||||||||||||    
T  30388364 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaaaccta 30388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 21032153 - 21032101
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaa-aagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  21032153 ggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaactaaac 21032101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 10039727 - 10039674
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||  |||||||||| |||||||||||||||||| ||||    
T  10039727 ggtgcaaaatcgcacaattagcaaaagatag-ggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 11656784 - 11656833
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||||| | |||||||||||||||    
T  11656784 ggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaa 11656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 31598157 - 31598201
Alignment:
Q  348 aaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatta 391  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  31598157 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatta 31598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 391
Target Start/End: Original strand, 31598641 - 31598685
Alignment:
Q  348 aaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatta 391  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  31598641 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatta 31598685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 30388111 - 30388065
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagatagggggg-aaagtgcaattaa 30388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 2354795 - 2354861
Alignment:
Q  326 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||  ||| |||||||||||||||||||||||||  ||||  ||||||| |||||||||    
T  2354795 ctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaa 2354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 13177033 - 13177102
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaa 388  Q
    ||||||| |||||||||||  |||||||| |||||| ||||||||||| |  ||| |||||||||||||||    
T  13177033 caaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactata-gggggaaaagtgcaa 13177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 29074350 - 29074412
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaa 381  Q
    |||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||||||||||||    
T  29074350 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29074412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 29079114 - 29079176
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaa 381  Q
    |||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||||||||||||    
T  29079114 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29079176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 29106923 - 29106985
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaa 381  Q
    |||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||||||||||||    
T  29106923 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaa 29106985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 3825578 - 3825530
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||| ||| |||||||||||||||||||    
T  3825578 ggtgcaaaatcgcacaattagcaaaatata-gggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18242158 - 18242207
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||||||||||   |||| |||||||||    
T  18242158 ggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaa 18242207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 21032030 - 21031982
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||| || |||||||||||||||||||    
T  21032030 ggtgcaaaatcgcacaattagcaaaagtta-gggggaaaagtgcaattaa 21031982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 23250643 - 23250595
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||||||||||||| |||| ||||||||||||||    
T  23250643 ggtgcaagatctcacaattgacaaaagata-ggggaaaaagtgcaattaa 23250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 2762659 - 2762611
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  2762659 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 10039845 - 10039893
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  10039845 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 11656656 - 11656608
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  11656656 ggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 18242034 - 18242082
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  18242034 ggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 18242082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 394
Target Start/End: Original strand, 23250768 - 23250823
Alignment:
Q  339 atgaggtgcaaaatcgcacaattga-caaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||||||| | ||||| ||| |||| ||||||||||||||||    
T  23250768 atgaggtgcaaaatcgcacaattaaccaaaatata-ggggtaaaagtgcaattaaac 23250823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 4e-27; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 39691977 - 39692051
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39691977 caaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaa 39692051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 6002314 - 6002240
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  6002314 caaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaa 6002240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 49284486 - 49284412
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  49284486 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 49284412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 28634134 - 28634214
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||  ||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  28634134 caaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacctat 28634214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 6002871 - 6002945
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||  |||||||||||||||    
T  6002871 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaa 6002945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 42611262 - 42611184
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  |||||||||||||||||||||||| ||||  ||| |||||||||||||||||||||||    
T  42611262 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaaacct 42611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 48104755 - 48104677
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  48104755 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaaacct 48104677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 42611591 - 42611668
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| || ||||||||  |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  42611591 caaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaaacc 42611668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 50430058 - 50430135
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  50430058 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 50430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 8108773 - 8108718
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8108773 ggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacctat 8108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 8108985 - 8109044
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 8109044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 396
Target Start/End: Original strand, 22149699 - 22149754
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  22149699 gaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaacct 22149754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 26815096 - 26815175
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||    
T  26815096 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 32163020 - 32163099
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  32163020 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 9347203 - 9347129
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9347203 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 26814771 - 26814697
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  26814771 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 46823920 - 46823843
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  |||  ||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  46823920 caaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 46823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 47955358 - 47955309
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47955358 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 47955309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 48191348 - 48191424
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttattaga 410  Q
    |||| ||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||||| ||||| |||||    
T  48191348 aaaagatggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcctattttttttttaga 48191424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 1176888 - 1176837
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1176888 ggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaaac 1176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 44911102 - 44911023
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||||||| |||  ||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||||    
T  44911102 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 48190833 - 48190774
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 48190774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 999188 - 999111
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  999188 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaaacct 999111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 13918844 - 13918918
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||  ||||||||||  |||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  13918844 caaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 20480244 - 20480171
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  20480244 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 20480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 21687102 - 21687028
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| ||||||||||  |||||||||||||  |||||||||||||||||||||||    
T  21687102 caaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 47955610 - 47955664
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  47955610 ggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 48105093 - 48105167
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  48105093 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 50526449 - 50526523
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  50526449 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 50949542 - 50949615
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 391  Q
    ||||||| ||||||| |||  ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||    
T  50949542 caaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaatta 50949615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 28633797 - 28633717
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||  ||| |||||||||||| ||||||| ||||  ||| ||||||||||||||||||| |||||    
T  28633797 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcctat 28633717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 6703537 - 6703458
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||  |||  ||||| || |||||||||||||| ||||    
T  6703537 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 31848194 - 31848249
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||    
T  31848194 ggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagcctat 31848249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 6703871 - 6703945
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||||||||| ||||  ||||||| |||||||||||||||    
T  6703871 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaa 6703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 9347528 - 9347613
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    ||||||| |||||||||||  ||| |||||||||| ||||||||| ||||  ||||||||| ||||||||||||| ||||| |||||    
T  9347528 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggg-aaagtgcaattaagcctatattttt 9347613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 13918523 - 13918449
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||| || ||||||||||||||    
T  13918523 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 27172192 - 27172119
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  27172192 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 27172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 27172518 - 27172592
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  | |||||||||||||||||||||    
T  27172518 caaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaa 27172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 49285032 - 49285086
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagata 372  Q
    ||||||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  49285032 caaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagata 49285086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 50615289 - 50615243
Alignment:
Q  346 gcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 50615598 - 50615671
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  50615598 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 346 - 392
Target Start/End: Complemental strand, 50623117 - 50623071
Alignment:
Q  346 gcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 50623426 - 50623499
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  50623426 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 50623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 4692411 - 4692484
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||| |||||||||| ||||||||| ||||  |||||||| ||||||||||||||    
T  4692411 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaa 4692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 17518604 - 17518652
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17518604 ggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaa 17518652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 395
Target Start/End: Complemental strand, 50949237 - 50949161
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    |||||| ||||||| |||  |||||||||||||||||||||||| || |  ||||| ||||||||| ||||||||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaaacc 50949161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 20371115 - 20371043
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||||||||||||||  ||||||||  |||||||||||||    
T  20371115 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaa 20371043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 41082959 - 41082912
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||    
T  41082959 tgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaa 41082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 41083213 - 41083267
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||| |||||    
T  41083213 ggtgcaaaatcgcacaactaacaaaagata-gggggaaaagtgcaattaagcctat 41083267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 44911414 - 44911493
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||||||| |||  ||  |||||||||||||||||||| ||||  |||||||| |||| ||||||||||||||    
T  44911414 caaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 1177020 - 1177074
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||| ||||||||  | |||||||||| |||||||||||||||||||||    
T  1177020 ggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaaccta 1177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 19008752 - 19008806
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||||  |||  ||||||||||||||||||||||| ||||    
T  19008752 ggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 46824255 - 46824329
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||||||||| ||||  ||||| || ||||||||||||||    
T  46824255 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaa 46824329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 50429733 - 50429659
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  |||||||||||||||||||||||  ||||  |||  |||||||||| |||||||    
T  50429733 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaa 50429659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 13589661 - 13589709
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  13589661 ggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 13589709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 21687445 - 21687517
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||||||| |||||||||||||||| ||||  ||| ||||||||||||| |||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattata-gggggaaaagtgctattaa 21687517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 33085731 - 33085674
Alignment:
Q  335 aaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||||||||||||| |||||| |||||||| |||||||    
T  33085731 aaacatggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaa 33085674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 999502 - 999581
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| |||   ||| ||||||||||||||||||| |||||    
T  999502 caaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctata-gggggaaaagtgcaattaagcctat 999581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 392
Target Start/End: Original strand, 20480591 - 20480662
Alignment:
Q  320 aaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| |||||||||||  ||  |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 20480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 396
Target Start/End: Complemental strand, 31847945 - 31847894
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||| ||||||||  ||||||||| ||||| |||||||||||||||||    
T  31847945 tgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaaacct 31847894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 17518354 - 17518301
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| ||||||||||  ||||||| |||||||||| ||||    
T  17518354 ggtgcaaaatcgcacaattaacaaaagata-aggggaaaggtgcaattaagccta 17518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 19007783 - 19007722
Alignment:
Q  346 gcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttatta 408  Q
    ||||||||||||||||| ||||  ||||||||| ||||||||||||| ||| | |||||||||    
T  19007783 gcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaagcctttttttttatta 19007722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 394
Target Start/End: Complemental strand, 31848067 - 31848017
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||| ||||| ||||| ||| ||||||||||||||||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaac 31848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 39690846 - 39690792
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||| | ||| |||||||| |||||||||| ||| ||||    
T  39690846 ggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 47498492 - 47498545
Alignment:
Q  338 catgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||| ||||||||| |||||||||||||||  ||| |||||||||||||||||||    
T  47498492 catggggtgcaaaaccgcacaattgacaaactata-gggggaaaagtgcaattaa 47498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 49318143 - 49318216
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  ||| | |||||||||||||||||| ||||  ||||||||| |||||||||||||    
T  49318143 caaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaa 49318216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 20371355 - 20371403
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  20371355 ggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 20371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 22149453 - 22149406
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  22149453 ggtgcaaaatcgcacaatt-accaaagataggggg-aaaagtgcaattaa 22149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 394
Target Start/End: Original strand, 22149579 - 22149632
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||||  ||||| |||| |||| ||||||||||||||||    
T  22149579 aggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaac 22149632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 49317827 - 49317755
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||| | |||||||| ||||||||| ||||  ||| |||||||||||||||||||    
T  49317827 aaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 49317755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 49318421 - 49318493
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||| | ||||||||||||||||||| |||  ||| ||||||||| |||||||||    
T  49318421 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactata-gggggaaaaatgcaattaa 49318493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 36096452 - 36096529
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  36096452 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 36096529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 50678856 - 50678776
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  50678856 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctat 50678776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 43050684 - 43050606
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  43050684 caaaatcactcgtttaaaaacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaaacct 43050606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 36095894 - 36095820
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  36095894 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 36095820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 50679401 - 50679475
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  50679401 caaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaa 50679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 39744442 - 39744521
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  39744442 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 45830173 - 45830252
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  45830173 caaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 56505757 - 56505690
Alignment:
Q  331 ttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  56505757 ttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctat 56505690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 43051229 - 43051303
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||| |||||||||    
T  43051229 caaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaa 43051303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 9023321 - 9023242
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||  ||| |||||||||||||||||||| ||||  ||||||| ||||||||||||||| ||||    
T  9023321 caaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 28196423 - 28196344
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  28196423 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 169416 - 169490
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  169416 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 293194 - 293268
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  293194 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 9023657 - 9023731
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9023657 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 24775776 - 24775834
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24775776 aaaagatggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 24775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 25161955 - 25161881
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  25161955 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 28196750 - 28196824
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  28196750 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 28196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 32703627 - 32703701
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  32703627 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32703701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 397
Target Start/End: Original strand, 47219179 - 47219257
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||| || |||||||||||| ||||||||||||||||||||  |||||||||| || ||||| ||||||||||||||    
T  47219179 aaaatcgctggtttaaaaacataaggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaaaccta 47219257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 13198908 - 13198957
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13198908 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 13198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 9380718 - 9380798
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||  |||  ||||||||||||||||||| ||||  ||||||||||||||||||||||| |||||    
T  9380718 caaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctat 9380798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 292859 - 292780
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||||| |||||||| ||||||||| ||||  ||||||||||||||||||||||| ||||    
T  292859 caaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 4239343 - 4239417
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  4239343 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 9380384 - 9380310
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| || ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9380384 caaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 11529245 - 11529171
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| | || ||||||||||| ||||||||||| |||||||| |||||| ||||| ||||||||||||||||    
T  11529245 caaaatcgcacgattaaaaacatggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaa 11529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 16555567 - 16555513
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||    
T  16555567 ggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 43292114 - 43292040
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  43292114 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 22681626 - 22681578
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22681626 ggtgcaaaatcgcacaattgacaaaagatagggggg-aaagtgcaattaa 22681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Original strand, 23540230 - 23540303
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||  |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  23540230 aaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 32703302 - 32703214
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttat 406  Q
    ||||||| |||||||||||  | | |||||| ||||||||||||| ||||  ||||||||||||||||||||||| ||| | |||||||    
T  32703302 caaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcctttttttttat 32703214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 49178818 - 49178866
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatta 391  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  49178818 ggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 169091 - 169016
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg-gaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||| |||||||||||||||    
T  169091 caaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaa 169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 16555809 - 16555868
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  16555809 aaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaa 16555868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 22681881 - 22681936
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcctat 22681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 26207723 - 26207797
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||||||||||||| |||||||||    
T  26207723 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 26207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 39086600 - 39086674
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  || ||||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  39086600 caaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 56506551 - 56506631
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||  |||||||||||  || |||||| ||||||||| ||||||||| ||| ||||||||||||||| |||||    
T  56506551 caaaatcgctcaattaaaaacatggagtacaaaattgcacaattggcaaaagataagggtgaaaagtgcaattaagcctat 56506631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 5206049 - 5205986
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||| ||| |||||||||||||  |||| ||||||||||||| |||||||||||||||| ||||    
T  5206049 aaaagatggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagccta 5205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 11241439 - 11241392
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||| |||||||||| || ||||||||||||||||    
T  11241439 tgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaa 11241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 13198655 - 13198604
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||| |||||||||  || |||||||||||||||||    
T  13198655 ggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaaac 13198604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 39744107 - 39744028
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||| |||||||||||||||  |||  |||||||| |||||||||||||| ||||    
T  39744107 caaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 44468900 - 44468959
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg 377  Q
    ||||||| |||||||||||  |||||||||||||||||||||||| ||||  ||||||||    
T  44468900 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataggggg 44468959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 3930482 - 3930535
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||| ||||    
T  3930482 ggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 8182044 - 8181994
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  8182044 ggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaa 8181994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 12757843 - 12757766
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||||| |||||||||||||||||||||||  ||| |  |||||||| |||||||||||    
T  12757843 caaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactata-gaaggaaaagtacaattaaacct 12757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 26207437 - 26207364
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  ||| |||||||||||||||||||| ||||  ||||||||| |||||||||||||    
T  26207437 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactatagggggg-aaagtgcaattaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 43292334 - 43292408
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  | ||||||||||| |||||||||    
T  43292334 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaa 43292408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 5206232 - 5206280
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  5206232 ggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaa 5206280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 18077204 - 18077253
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  18077204 ggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaa 18077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 398
Target Start/End: Complemental strand, 23432542 - 23432473
Alignment:
Q  330 tttaaaaacatgaggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||| ||| |||||| ||| ||||||||||| |||| |||||||| |||||||||||||| |||||    
T  23432542 tttaaaaagatggggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaattaagcctat 23432473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 48406362 - 48406438
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||  |||||||||||||||||||| ||||  ||||||||| ||||| ||||||||||    
T  48406362 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattatagggggg-aaagtacaattaaacc 48406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 397
Target Start/End: Original strand, 11241653 - 11241716
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||| ||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||||| ||||    
T  11241653 aaaaagatggggtgcaaaatcccacaattggcaaaagata-gggggaaaagtacaattaagccta 11241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 24775690 - 24775642
Alignment:
Q  347 caaaatcgcacaattgacaaaag-ataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  24775690 caaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaac 24775642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 390
Target Start/End: Complemental strand, 49178692 - 49178644
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  49178692 ggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 377
Target Start/End: Original strand, 25162290 - 25162349
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg 377  Q
    ||||||| |||||||||||  |||  |||||||||| |||||||||||||| ||||||||    
T  25162290 caaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatataggggg 25162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 45829071 - 45828997
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| || |||||| |||||  ||| ||||||||||||||||  |||||||||| | ||||||| |||||||    
T  45829071 caaaatcgcttgtttaataacattgggtacaaaatcgcacaattggtaaaagataggagtgaaaagtacaattaa 45828997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 48406038 - 48405965
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||| ||||| ||||  ||| |||||||||||||||||||    
T  48406038 caaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactata-gggggaaaagtgcaattaa 48405965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 16555694 - 16555743
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  16555694 aggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 23539916 - 23539838
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    |||||||  |||||| |||  ||| |||||||||||||||||||| ||||  ||||||||  ||||||||||||| |||||    
T  23539916 caaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagcctat 23539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 25225400 - 25225449
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||||||||| |  | ||||||||||||    
T  25225400 ggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaa 25225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 315
Target Start/End: Complemental strand, 36095963 - 36095934
Alignment:
Q  286 aaaatcagacacatcatcactaaaatacat 315  Q
    ||||||||||||||||||||||||||||||    
T  36095963 aaaatcagacacatcatcactaaaatacat 36095934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 39912464 - 39912509
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattga 363  Q
    |||||||||||||||||||  ||| | |||||||||||||||||||    
T  39912464 caaaatcactcgtttaaaactatgggatgcaaaatcgcacaattga 39912509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 54508867 - 54508818
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||| |||||||| |||||||| || || ||||||||||||||    
T  54508867 ggtgcaaaatcacacaattggcaaaagattggaggaaaaagtgcaattaa 54508818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 392
Target Start/End: Original strand, 7603422 - 7603469
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagata-ggggaaaaagtgcaattaa 7603469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 27304895 - 27304943
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  27304895 ggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 35393778 - 35393841
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttatt 407  Q
    |||||||| ||||||||||  ||||||||| ||| ||||||||||||||| ||| | ||||||||    
T  35393778 ggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaagcctttttttttatt 35393841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 6e-26; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 2639459 - 2639539
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  2639459 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcctat 2639539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 26841664 - 26841585
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  26841664 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 393
Target Start/End: Complemental strand, 7591278 - 7591203
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaa 393  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  7591278 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaaa 7591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 18296153 - 18296079
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  18296153 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 18296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 26842215 - 26842289
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  26842215 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaa 26842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 405
Target Start/End: Complemental strand, 7664325 - 7664238
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttta 405  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||| ||||||    
T  7664325 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcctattttttta 7664238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 2638897 - 2638823
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  2638897 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 2638823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 7591827 - 7591901
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||  |||||||||    
T  7591827 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaa 7591901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 8851225 - 8851147
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  8851225 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacct 8851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 8851559 - 8851633
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8851559 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 8851633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 30190975 - 30190914
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||    
T  30190975 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctattttttt 30190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 7664650 - 7664724
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  7664650 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 26692473 - 26692395
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||| ||| ||||||||||||||||||    
T  26692473 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacct 26692395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 37720281 - 37720207
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  37720281 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 6495721 - 6495786
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttttat 406  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| | |||||||    
T  6495721 gaggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcctttttttttat 6495786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 20347466 - 20347515
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20347466 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20347515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 26692797 - 26692874
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||| |||||||||||||||||||||    
T  26692797 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 26692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Original strand, 18296685 - 18296744
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18296744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 333 - 392
Target Start/End: Complemental strand, 24832393 - 24832334
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| ||| |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  24832393 aaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 24832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 41790889 - 41790968
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||||||| |||  ||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  41790889 caaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 6325324 - 6325398
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||||| |  |||||||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  6325324 caaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 6171458 - 6171507
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  6171458 ggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaa 6171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 11883675 - 11883626
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  11883675 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 11883928 - 11883977
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  11883928 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 395
Target Start/End: Original strand, 18055309 - 18055370
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    |||| ||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  18055309 aaaagatggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaacc 18055370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 30191227 - 30191276
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  30191227 ggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaa 30191276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 40469731 - 40469784
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  40469731 ggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacct 40469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 15920830 - 15920779
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  15920830 ggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaaac 15920779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 398
Target Start/End: Complemental strand, 20347215 - 20347160
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| |||||| |||||    
T  20347215 ggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagcctat 20347160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 5378713 - 5378659
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  5378713 ggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 6171208 - 6171159
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  6171208 aggtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaa 6171159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 388
Target Start/End: Complemental strand, 6324994 - 6324924
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaa 388  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||| ||||  |||||||||||||||||||    
T  6324994 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 16910904 - 16910830
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  | | |||||||||||||||||||    
T  16910904 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaa 16910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 17851054 - 17850981
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||| ||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  17851054 caaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 17850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 18750103 - 18750176
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||| ||||||||||||    
T  18750103 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggagaagtgcaattaa 18750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 29230334 - 29230280
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagccta 29230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 393
Target Start/End: Complemental strand, 29343633 - 29343583
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaa 393  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaaa 29343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 32673145 - 32673197
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  32673145 ggtgcaaaatcgcacaattggcaaaagata-ggggaaaaagtgcaattaaacct 32673197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 41790567 - 41790491
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| ||||||| |||  ||| |||||||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  41790567 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactata-gggggaaaaatgcaattaaacc 41790491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 403
Target Start/End: Original strand, 5379961 - 5380021
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatctttt 403  Q
    ||||||||||||||||||||  |||  ||||||||||||||||||||||| ||||| ||||    
T  5379961 ggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcctatttttt 5380021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 43495486 - 43495537
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  43495486 ggtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaaac 43495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 5793524 - 5793446
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||| |||||||||||  ||  | |||||||||||||||||| ||||  | | |||||||||||||||||||||||    
T  5793524 caaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaaacct 5793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 16911246 - 16911319
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||| | |||||||||||||    
T  16911246 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggcg-aaagtgcaattaa 16911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 38490818 - 38490891
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||  |||  |||||| || |||||||||||||    
T  38490818 caaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagggagg-aaagtgcaattaa 38490891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 6495518 - 6495470
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  6495518 ggtgcaaaatcgcacaattaacaaa-gatagggaggaaaagtgcaattaa 6495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 26737783 - 26737832
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  26737783 ggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaa 26737832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 15321564 - 15321513
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||| |||  ||||||||||||  ||||||||||||||||    
T  15321564 ggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaaac 15321513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 326 - 392
Target Start/End: Complemental strand, 19141512 - 19141447
Alignment:
Q  326 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||  ||| |||||||||| ||||||||| ||||  |||||||| ||||||||||||||    
T  19141512 ctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaa 19141447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 395
Target Start/End: Original strand, 19141826 - 19141901
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| ||||||| |||  ||| | |||||||||||||||||| ||||  ||||||||  ||||||||||||||||    
T  19141826 caaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaaacc 19141901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Complemental strand, 7979642 - 7979593
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaa 367  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||    
T  7979642 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaa 7979593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 32672894 - 32672845
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||||||| ||   ||||||||||||||    
T  32672894 ggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaa 32672845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 40469479 - 40469430
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||||| ||||||| | |||||||    
T  40469479 ggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaa 40469430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 390
Target Start/End: Original strand, 40469606 - 40469655
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  40469606 aggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 6171335 - 6171383
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaatt 390  Q
    ||||||||||||||||||| || |||||||| |||| ||||||||||||    
T  6171335 ggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 6171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 15321440 - 15321395
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||    
T  15321440 tgcaaaattgcacaattaacaaaagata--ggggaaaagtgcaattaa 15321395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 18055219 - 18055167
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||| |||||  |||||| | ||||||||||||||||    
T  18055219 ggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaattaaac 18055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 390
Target Start/End: Original strand, 26737658 - 26737706
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaatt 390  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||    
T  26737658 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 43495356 - 43495312
Alignment:
Q  348 aaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||  ||||| ||||| |||||||||||||||||    
T  43495356 aaaatcgcacaattagcaaaatataggtgggaaaagtgcaattaa 43495312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 44599566 - 44599492
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  44599566 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44599492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 44600112 - 44600186
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  44600112 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44600186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 13863390 - 13863311
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||    
T  13863390 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 318 - 395
Target Start/End: Complemental strand, 18864044 - 18863967
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  18864044 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 18863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 20418965 - 20418886
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  20418965 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 20419301 - 20419375
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20419301 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 20419375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 22740233 - 22740159
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  22740233 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 404
Target Start/End: Original strand, 37889236 - 37889322
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||| |||||    
T  37889236 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctatattttt 37889322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 8643743 - 8643822
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||  |||||||||||  ||||||||||||||| ||||    
T  8643743 caaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 10533111 - 10533032
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  10533111 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 3205070 - 3205144
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  | | |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  3205070 caaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 9035270 - 9035344
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9035270 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 9412327 - 9412381
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  9412327 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 13863934 - 13864007
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||| ||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  13863934 caaaatcgctcgtttaaaaatatggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 17157044 - 17156970
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||  ||| |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17157044 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 37888910 - 37888836
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  37888910 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 37972373 - 37972447
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  37972373 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 3687658 - 3687707
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3687658 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 3687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 38826899 - 38826964
Alignment:
Q  327 tcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||  |||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  38826899 tcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 394
Target Start/End: Original strand, 22740568 - 22740643
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  22740568 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaaac 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 46816288 - 46816367
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||| ||| |||||||||||||| |||||  ||||||||| ||| |||||||||||||| ||||    
T  46816288 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagccta 46816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 13744210 - 13744283
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  13744210 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 13744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 9412075 - 9412026
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9412075 ggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 9412026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 392
Target Start/End: Complemental strand, 48359395 - 48359323
Alignment:
Q  319 aaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| |||||||||||  ||| |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  48359395 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaa 48359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 27096346 - 27096405
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttta 405  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  27096346 tgcaaaatcacacaattgacaaaagata-gggggaaaagtgcaattaaaccattcttttta 27096405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 27181957 - 27181898
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttta 405  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  27181957 tgcaaaatcacacaattgacaaaagatag-ggggaaaagtgcaattaaaccattcttttta 27181898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 37972037 - 37971958
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  | ||||| ||||||||||||||| ||||    
T  37972037 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 3687406 - 3687356
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagatagg-ggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  3687406 ggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaa 3687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 13741634 - 13741560
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| ||||||||||||||||||||  |||  ||||||||||||| |||||||||    
T  13741634 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 29292999 - 29292925
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  ||| | |||||||||||||||||| ||||  |||||||||||||||||||||||    
T  29292999 caaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 13772903 - 13772952
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  13772903 ggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaa 13772952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 404
Target Start/End: Original strand, 15567266 - 15567334
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    ||||| ||| ||||||||||||||| |    ||||||||||||||||||||||||||||||||||| |||||    
T  15567266 aaaaatatgcggtgcaaaatcgcactag---caaaagataggggggaaaagtgcaattaaacctatattttt 15567334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 36527451 - 36527383
Alignment:
Q  327 tcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||||||  ||| |||||||||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactata-ggggaaaaagtgcaattaaacct 36527383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 9034945 - 9034865
Alignment:
Q  318 caaaatcactcgtttaaaaacatgagg-tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| |||||||||||  ||| || |||| ||||||||||||| ||||  ||||||||||||||||||||||| ||||    
T  9034945 caaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 13772702 - 13772639
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||| ||| ||||||||||| |||||||  |||||||||||| |||||||||||||||| ||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 18864379 - 18864457
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||| ||| |||||||  |||||||||||||||||||||||| ||||  ||| ||||||||||| ||||||| ||||    
T  18864379 caaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactata-gggggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 5349724 - 5349781
Alignment:
Q  332 taaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||   |||||||||||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaa 5349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 5735553 - 5735599
Alignment:
Q  347 caaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaa 393  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaaa 5735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 6908264 - 6908211
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||    
T  6908264 ggtgcaaaatcgcacaattaacaatagata-gggggaaaagtgcaattaagccta 6908211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 397
Target Start/End: Original strand, 23686723 - 23686773
Alignment:
Q  347 caaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||  |||||||||||||| |||||||||||||| ||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagccta 23686773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 29293323 - 29293397
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||||||| |||  |||  ||||||||||||||||||| ||||  ||||||||||||| |||||||||    
T  29293323 caaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 326 - 402
Target Start/End: Complemental strand, 3204736 - 3204662
Alignment:
Q  326 ctcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttt 402  Q
    |||||||||||  ||| |||||||||||||||||||| ||||  ||||||||  ||||||||||||| || ||||||    
T  3204736 ctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggg--aaagtgcaattaagccaatcttt 3204662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 404
Target Start/End: Original strand, 6908486 - 6908546
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    |||||||||||||||||||  ||||| ||||||||| ||||||||||||||| ||| |||||    
T  6908486 ggtgcaaaatcgcacaattagcaaaaaatagggggg-aaagtgcaattaaacatattttttt 6908546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 8953891 - 8953939
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| |||||||| |||||||||| |||||||||||||||||||    
T  8953891 ggtgcaaaattgcacaattaacaaaagata-gggggaaaagtgcaattaa 8953939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 42419005 - 42419085
Alignment:
Q  318 caaaatcactcgtttaaaaacatgagg-tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||| |||||||||||  ||| || ||||||| |||||||||| ||||  ||||||| |||||||||||||||||||||    
T  42419005 caaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagggg-gaaaagtgcaattaaacctat 42419085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 5735303 - 5735255
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||  | ||||||||||| |||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaa 5735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 38191312 - 38191253
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctatcttttt 404  Q
    |||||||||||| ||||  |||||||||  | |||||||||||||||||||| |||||||    
T  38191312 tgcaaaatcgcataattagcaaaagataaagaggaaaagtgcaattaaacctttcttttt 38191253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 18925115 - 18925065
Alignment:
Q  342 aggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||| ||||||||  ||||||||||||  |||||||||||||||    
T  18925115 aggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaa 18925065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 8953651 - 8953601
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacct 396  Q
    ||||||||||||| ||||| |||||||| |||||  |||||||||||||||||    
T  8953651 gtgcaaaatcgcataattgtcaaaagatcggggg--aaagtgcaattaaacct 8953601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 391
Target Start/End: Original strand, 18925231 - 18925280
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaatta 391  Q
    |||||||||||||||||||| | ||||||||||||| |||||| ||||||    
T  18925231 ggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatta 18925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 27096216 - 27096167
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaa 393  Q
    ||||||||||||||||||  |||| ||||||||| |||||||||||||||    
T  27096216 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaa 27096167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 27182087 - 27182136
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaa 393  Q
    ||||||||||||||||||  |||| ||||||||| |||||||||||||||    
T  27182087 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaa 27182136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 29291858 - 29291809
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||| ||||  |||||||||||| | ||||||||||||||    
T  29291858 ggtgcaaaatcgcataattatcaaaagatagggagaaaaagtgcaattaa 29291809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 30857906 - 30857955
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||||||||||||||||| | |  ||||||||||||||    
T  30857906 ggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaa 30857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 38191567 - 38191616
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||| |||| ||||||||||||||  |||| |||||||||    
T  38191567 ggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaa 38191616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 39983751 - 39983702
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||| |||||||| |||| | |||||||| |||||||||||||||||||    
T  39983751 ggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaa 39983702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 5735428 - 5735376
Alignment:
Q  343 ggtgcaaaatcgcacaattgac-aaaagataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||||||| | ||||||||||| | |||||||||| |||||    
T  5735428 ggtgcaaaatcgcacaattggcaaaaagatagggagaaaaagtgcaaataaac 5735376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 33628653 - 33628709
Alignment:
Q  334 aaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaatt 390  Q
    |||| ||| |||||||||||||||||||   ||||||||| ||| ||||||||||||    
T  33628653 aaaagatggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatt 33628709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 343 - 394
Target Start/End: Original strand, 34235857 - 34235909
Alignment:
Q  343 ggtgcaaaatcgcacaatt-gacaaaagataggggggaaaagtgcaattaaac 394  Q
    ||||| |||||| |||||| || ||||||||||||| ||||||||||||||||    
T  34235857 ggtgcgaaatcgaacaatttgaaaaaagatagggggcaaaagtgcaattaaac 34235909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 35080215 - 35080259
Alignment:
Q  333 aaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggg 377  Q
    ||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  35080215 aaaaagatggggtgcaaaatcgcacaattaacaaaagataagggg 35080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 6772 - 6846
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  6772 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 6229 - 6155
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| ||| |||||||| ||| |||| ||||||||||||||  |||||||||| || |||||||||||||||    
T  6229 caaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaa 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 407 - 333
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| | |||||||||||||||||||||||  |||||||||||||||||||||||    
T  407 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 740 - 813
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  ||| |||| ||||||||||||||    
T  740 caaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactata-ggggaaaaagtgcaattaa 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 185251 - 185325
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  185251 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 184916 - 184842
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||||| ||||||||  |||| || |||||||||||||||    
T  184916 caaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 1170 - 1121
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1170 ggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaa 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 1422 - 1471
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  1422 ggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 6446 - 6397
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  6446 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 6699 - 6747
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  6699 ggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaa 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 25371 - 25420
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  25371 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 25420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 438982 - 438933
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  438982 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 183415 - 183364
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  183415 ggtgcaaaatcgtacaattgacaaaagatag-ggggaaaagtgcaattaaacc 183364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 397
Target Start/End: Original strand, 439203 - 439255
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||  ||||||||| |||| |||||||||||||| ||||    
T  439203 tgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 183670 - 183713
Alignment:
Q  349 aaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||  ||||| |||||||||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtgcaattaa 183713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 183544 - 183594
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||||||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaac 183594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 392
Target Start/End: Complemental strand, 6661 - 6610
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  6661 gaggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaa 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 6878 - 6925
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  6878 ggtgcaaaat-gcacaattggcaaaagatagggggg-aaagtgcaattaa 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 1784 - 1837
Alignment:
Q  341 gaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacc 395  Q
    ||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  1784 gaggtgcaaaatcgcacaataaacaaaagata-gggggaaaagtgcaattaaacc 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 397
Target Start/End: Original strand, 45809 - 45862
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaaccta 397  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  45809 ggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaagccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 45587 - 45540
Alignment:
Q  344 gtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagatag-ggggaaaagtgcaattaa 45540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 398
Target Start/End: Original strand, 20031 - 20100
Alignment:
Q  329 gtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaaacctat 398  Q
    ||||||||  ||| || ||||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  20031 gtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcctat 20100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 19697 - 19624
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||||||||||||| ||||  |||  |||||||| |||||||||    
T  19697 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactata-tggggaaaattgcaattaa 19624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 411974 - 411926
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  411974 ggtgcaaaatcgcacaattgacaaaagatag-ggggtaaagtgcaattaa 411926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 10062 - 10015
Alignment:
Q  345 tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaa 10015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 50150 - 50078
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| |||||||||| ||||||||||||||  ||||||||  |||||||||||||    
T  50150 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactataggggg--aaagtgcaattaa 50078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 50509 - 50557
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||||    
T  50509 ggtgcaaaatcgcacaattggcaaactata-gggggaaaagtgcaattaa 50557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 38672 - 38746
Alignment:
Q  318 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||  |||||||| |  ||| |||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  38672 caaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 394
Target Start/End: Complemental strand, 73139 - 73087
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaa-gataggggggaaaagtgcaattaaac 394  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||||||||    
T  73139 ggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaac 73087  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 392
Target Start/End: Complemental strand, 9983 - 9908
Alignment:
Q  318 caaaatcactcgtttaaaaacatgagg-tgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    ||||||| |||||||||||  ||| || || ||||||||||||||| ||||  |||||||| ||||||||||||||    
T  9983 caaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 9908  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 17158 - 17206
Alignment:
Q  343 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 392  Q
    |||||||||| ||||||||  ||||||||| |||||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagata-gggggaaaagtgcaattaa 17206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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