View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3975_low_10 (Length: 211)

Name: NF3975_low_10
Description: NF3975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3975_low_10
NF3975_low_10
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-211)||(5890-6100)
[»] chr7 (34 HSPs)
chr7 (1-211)||(16219485-16219694)
chr7 (1-211)||(67887-68098)
chr7 (1-211)||(810898-811108)
chr7 (1-211)||(47831951-47832161)
chr7 (1-211)||(9389464-9389674)
chr7 (1-211)||(16056471-16056680)
chr7 (1-211)||(18005789-18005999)
chr7 (1-211)||(22073059-22073268)
chr7 (26-211)||(16324174-16324358)
chr7 (1-211)||(44014318-44014526)
chr7 (54-165)||(15754702-15754813)
chr7 (1-211)||(12901468-12901681)
chr7 (54-211)||(15113140-15113296)
chr7 (54-211)||(28505069-28505225)
chr7 (54-211)||(11995798-11995954)
chr7 (54-159)||(15116677-15116781)
chr7 (54-211)||(34200980-34201136)
chr7 (123-211)||(39267414-39267502)
chr7 (123-211)||(9751318-9751406)
chr7 (123-211)||(2832073-2832161)
chr7 (128-211)||(18302448-18302531)
chr7 (123-211)||(17061729-17061815)
chr7 (171-210)||(123961-124000)
chr7 (123-166)||(2529866-2529909)
chr7 (171-210)||(4993798-4993837)
chr7 (171-210)||(13395233-13395272)
chr7 (171-210)||(48785625-48785664)
chr7 (145-211)||(12255560-12255625)
chr7 (174-211)||(12756485-12756522)
chr7 (174-211)||(26212310-26212347)
chr7 (174-211)||(44116820-44116857)
chr7 (174-210)||(16006732-16006768)
chr7 (178-210)||(21064932-21064964)
chr7 (174-210)||(21743056-21743092)
[»] chr3 (43 HSPs)
chr3 (1-211)||(14234631-14234843)
chr3 (1-211)||(15471068-15471277)
chr3 (1-211)||(1465178-1465388)
chr3 (54-211)||(16097525-16097682)
chr3 (62-211)||(32307872-32308021)
chr3 (92-211)||(12171873-12171992)
chr3 (54-211)||(49667852-49668009)
chr3 (67-211)||(13210096-13210240)
chr3 (54-211)||(1644451-1644608)
chr3 (54-211)||(12934079-12934236)
chr3 (49-166)||(16103971-16104088)
chr3 (5-211)||(37250935-37251140)
chr3 (54-211)||(9513104-9513261)
chr3 (54-211)||(9521079-9521236)
chr3 (42-211)||(22110119-22110287)
chr3 (54-155)||(49389453-49389554)
chr3 (123-211)||(12340017-12340105)
chr3 (123-211)||(14669025-14669113)
chr3 (123-211)||(14665870-14665958)
chr3 (123-211)||(14735383-14735471)
chr3 (46-209)||(43927322-43927484)
chr3 (104-211)||(324481-324587)
chr3 (174-211)||(42386726-42386763)
chr3 (123-165)||(4588602-4588644)
chr3 (174-211)||(14572903-14572940)
chr3 (174-211)||(53070467-53070504)
chr3 (171-210)||(2034752-2034791)
chr3 (171-210)||(2038259-2038298)
chr3 (171-210)||(2042000-2042039)
chr3 (171-210)||(14038489-14038528)
chr3 (171-210)||(14041957-14041996)
chr3 (171-210)||(18959206-18959245)
chr3 (175-210)||(23083132-23083167)
chr3 (171-210)||(39231036-39231075)
chr3 (173-211)||(11424532-11424570)
chr3 (174-211)||(17248055-17248092)
chr3 (171-211)||(606136-606176)
chr3 (173-209)||(11855032-11855068)
chr3 (173-209)||(20723297-20723333)
chr3 (174-210)||(30030153-30030189)
chr3 (174-210)||(54973700-54973736)
chr3 (174-210)||(54976310-54976346)
chr3 (174-210)||(54978920-54978956)
[»] chr5 (36 HSPs)
chr5 (1-211)||(21329264-21329474)
chr5 (34-211)||(21741312-21741489)
chr5 (1-211)||(21501923-21502133)
chr5 (1-211)||(26011803-26012012)
chr5 (54-211)||(22959302-22959459)
chr5 (62-211)||(21565747-21565896)
chr5 (54-211)||(19669094-19669251)
chr5 (123-211)||(5888944-5889032)
chr5 (54-211)||(19660606-19660762)
chr5 (123-211)||(22119961-22120049)
chr5 (1-159)||(20026760-20026917)
chr5 (123-211)||(24767105-24767193)
chr5 (124-209)||(21871342-21871426)
chr5 (124-209)||(21875622-21875706)
chr5 (123-211)||(36154597-36154683)
chr5 (46-133)||(22178064-22178151)
chr5 (173-211)||(25744035-25744073)
chr5 (174-211)||(25431709-25431746)
chr5 (123-211)||(22144316-22144402)
chr5 (171-210)||(4398019-4398058)
chr5 (171-210)||(16255704-16255743)
chr5 (171-210)||(16259337-16259376)
chr5 (171-210)||(22589501-22589540)
chr5 (171-210)||(22593056-22593095)
chr5 (171-210)||(22596611-22596650)
chr5 (171-210)||(22880519-22880558)
chr5 (171-210)||(23693769-23693808)
chr5 (171-210)||(26360854-26360893)
chr5 (171-210)||(43121474-43121513)
chr5 (171-210)||(43125007-43125046)
chr5 (174-211)||(1096782-1096819)
chr5 (174-211)||(11581014-11581051)
chr5 (174-211)||(25421847-25421884)
chr5 (173-209)||(23501118-23501154)
chr5 (174-210)||(26496199-26496235)
chr5 (174-210)||(29324991-29325027)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-211)||(802-1011)
[»] scaffold0138 (2 HSPs)
scaffold0138 (1-211)||(13083-13292)
scaffold0138 (46-211)||(18005-18169)
[»] chr1 (30 HSPs)
chr1 (1-211)||(22921636-22921847)
chr1 (1-211)||(35981455-35981665)
chr1 (1-208)||(49261483-49261690)
chr1 (1-211)||(20636992-20637202)
chr1 (63-211)||(20248481-20248629)
chr1 (70-211)||(22237841-22237982)
chr1 (54-211)||(52927750-52927906)
chr1 (62-211)||(33681212-33681361)
chr1 (54-211)||(21754232-21754388)
chr1 (1-159)||(21861389-21861546)
chr1 (54-159)||(12271744-12271848)
chr1 (54-211)||(20918798-20918954)
chr1 (123-211)||(28194217-28194305)
chr1 (1-159)||(21896078-21896232)
chr1 (5-149)||(16368115-16368259)
chr1 (5-208)||(50686761-50686963)
chr1 (123-211)||(26065205-26065292)
chr1 (171-210)||(14432123-14432162)
chr1 (171-210)||(20631628-20631667)
chr1 (171-210)||(22900022-22900061)
chr1 (171-210)||(24087727-24087766)
chr1 (171-210)||(36181887-36181926)
chr1 (171-210)||(37358780-37358819)
chr1 (171-210)||(45307602-45307641)
chr1 (174-211)||(433322-433359)
chr1 (174-211)||(20135502-20135539)
chr1 (174-211)||(38801161-38801198)
chr1 (155-211)||(16758947-16759003)
chr1 (174-210)||(20579779-20579815)
chr1 (173-209)||(21162079-21162115)
[»] chr4 (33 HSPs)
chr4 (1-209)||(15190459-15190667)
chr4 (1-211)||(15099492-15099702)
chr4 (1-211)||(39706056-39706266)
chr4 (54-210)||(8846569-8846725)
chr4 (1-211)||(12287977-12288186)
chr4 (54-211)||(12774194-12774351)
chr4 (123-211)||(24029006-24029094)
chr4 (124-211)||(3332151-3332238)
chr4 (117-211)||(22633981-22634075)
chr4 (1-211)||(16596789-16596998)
chr4 (123-211)||(20157058-20157146)
chr4 (123-210)||(13812578-13812665)
chr4 (46-149)||(46640285-46640387)
chr4 (5-149)||(53081979-53082124)
chr4 (83-211)||(15552039-15552166)
chr4 (174-211)||(21815071-21815108)
chr4 (174-211)||(21815400-21815437)
chr4 (174-211)||(21818493-21818530)
chr4 (1-133)||(13695-13827)
chr4 (123-211)||(44928692-44928778)
chr4 (123-211)||(52242962-52243048)
chr4 (171-210)||(287402-287441)
chr4 (171-210)||(16359815-16359854)
chr4 (171-210)||(31116822-31116861)
chr4 (171-210)||(55502517-55502556)
chr4 (145-211)||(15464698-15464764)
chr4 (125-159)||(32851642-32851676)
chr4 (174-211)||(7089191-7089228)
chr4 (172-205)||(13844852-13844885)
chr4 (174-211)||(17047842-17047879)
chr4 (174-211)||(44102525-44102562)
chr4 (174-210)||(4171338-4171374)
chr4 (174-210)||(14699030-14699066)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-211)||(10671-10880)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-211)||(32679-32888)
[»] chr8 (33 HSPs)
chr8 (1-207)||(6520511-6520716)
chr8 (1-211)||(38855019-38855229)
chr8 (62-211)||(26355467-26355616)
chr8 (1-211)||(21285741-21285950)
chr8 (1-211)||(21673847-21674057)
chr8 (1-211)||(23760609-23760822)
chr8 (54-211)||(5866045-5866201)
chr8 (54-211)||(17141110-17141266)
chr8 (127-211)||(39834100-39834184)
chr8 (83-211)||(21249607-21249734)
chr8 (54-210)||(21491189-21491344)
chr8 (1-210)||(20498707-20498915)
chr8 (83-211)||(21255445-21255572)
chr8 (1-132)||(983248-983382)
chr8 (5-149)||(17266821-17266965)
chr8 (46-149)||(22364851-22364954)
chr8 (51-149)||(37116543-37116641)
chr8 (145-211)||(41598471-41598536)
chr8 (171-210)||(17615229-17615268)
chr8 (171-210)||(22059159-22059198)
chr8 (171-210)||(22145156-22145195)
chr8 (172-211)||(22419184-22419223)
chr8 (171-210)||(24707577-24707616)
chr8 (173-211)||(37116663-37116701)
chr8 (174-211)||(20536522-20536559)
chr8 (174-211)||(21918770-21918807)
chr8 (174-211)||(23406695-23406732)
chr8 (174-210)||(6608025-6608061)
chr8 (174-210)||(7300833-7300869)
chr8 (173-209)||(16861100-16861136)
chr8 (174-210)||(21414997-21415033)
chr8 (46-149)||(24353210-24353316)
chr8 (174-210)||(45134676-45134712)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-211)||(6755-6965)
scaffold0333 (1-211)||(14135-14345)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-211)||(39941-40152)
scaffold0023 (1-166)||(100517-100683)
scaffold0023 (83-154)||(101619-101690)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-211)||(6953-7163)
scaffold0556 (1-211)||(8159-8368)
[»] scaffold0020 (1 HSPs)
scaffold0020 (46-211)||(15599-15764)
[»] chr6 (33 HSPs)
chr6 (54-211)||(19652390-19652547)
chr6 (1-211)||(23019550-23019759)
chr6 (27-211)||(27333053-27333236)
chr6 (27-211)||(27393793-27393976)
chr6 (1-211)||(19668516-19668725)
chr6 (1-211)||(22080506-22080717)
chr6 (54-165)||(1561498-1561609)
chr6 (54-211)||(28496242-28496398)
chr6 (54-211)||(29808653-29808809)
chr6 (83-211)||(4667982-4668109)
chr6 (46-211)||(9098293-9098457)
chr6 (83-210)||(4674830-4674956)
chr6 (83-211)||(4185592-4185719)
chr6 (123-210)||(4189221-4189307)
chr6 (123-211)||(21939648-21939736)
chr6 (51-211)||(35008344-35008502)
chr6 (70-211)||(20109354-20109493)
chr6 (123-209)||(31155169-31155254)
chr6 (171-210)||(12596269-12596308)
chr6 (171-210)||(16102655-16102694)
chr6 (171-210)||(16813088-16813127)
chr6 (171-210)||(16830108-16830147)
chr6 (171-210)||(29493065-29493104)
chr6 (173-211)||(15894200-15894238)
chr6 (173-211)||(18821589-18821627)
chr6 (51-149)||(23076926-23077024)
chr6 (174-211)||(18457030-18457067)
chr6 (174-210)||(2287677-2287713)
chr6 (174-210)||(8523246-8523282)
chr6 (174-210)||(15539593-15539629)
chr6 (174-210)||(15685871-15685907)
chr6 (171-211)||(17106045-17106085)
chr6 (171-211)||(25611493-25611533)
[»] scaffold0010 (2 HSPs)
scaffold0010 (54-210)||(130102-130258)
scaffold0010 (145-211)||(60482-60548)
[»] scaffold0621 (2 HSPs)
scaffold0621 (1-211)||(6678-6888)
scaffold0621 (54-159)||(8666-8770)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-211)||(2412-2623)
[»] scaffold0125 (1 HSPs)
scaffold0125 (54-211)||(45559-45716)
[»] chr2 (22 HSPs)
chr2 (1-211)||(28406120-28406331)
chr2 (3-211)||(25175995-25176194)
chr2 (1-211)||(7500-7709)
chr2 (54-211)||(22133984-22134141)
chr2 (1-211)||(18786670-18786879)
chr2 (5-211)||(23207426-23207631)
chr2 (5-211)||(23791423-23791628)
chr2 (54-159)||(22459381-22459485)
chr2 (46-149)||(25109078-25109181)
chr2 (171-210)||(31756229-31756268)
chr2 (106-211)||(23708387-23708490)
chr2 (171-210)||(41684531-41684570)
chr2 (171-210)||(44621239-44621278)
chr2 (145-207)||(20519964-20520026)
chr2 (173-211)||(23071731-23071769)
chr2 (174-211)||(298584-298621)
chr2 (174-211)||(23076756-23076793)
chr2 (174-210)||(21238877-21238913)
chr2 (174-210)||(21241427-21241463)
chr2 (174-210)||(24505016-24505052)
chr2 (174-210)||(31503913-31503949)
chr2 (174-210)||(31506479-31506515)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-166)||(12910-13075)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-211)||(7844-8050)
scaffold0218 (54-211)||(29048-29204)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-211)||(19407-19618)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-207)||(160880-161033)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-166)||(2030-2196)
[»] scaffold0211 (1 HSPs)
scaffold0211 (54-211)||(28578-28735)
[»] scaffold0628 (1 HSPs)
scaffold0628 (51-211)||(2571-2731)
[»] scaffold0028 (2 HSPs)
scaffold0028 (54-211)||(132848-133005)
scaffold0028 (1-159)||(62338-62496)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-167)||(14508-14675)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-211)||(136135-136345)
scaffold0021 (1-211)||(144843-145053)
scaffold0021 (171-210)||(133740-133779)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-211)||(103406-103615)
[»] scaffold0555 (1 HSPs)
scaffold0555 (54-211)||(10309-10465)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-167)||(5786-5952)
[»] scaffold0150 (1 HSPs)
scaffold0150 (54-211)||(32288-32435)
[»] scaffold0507 (1 HSPs)
scaffold0507 (57-211)||(7826-7979)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-211)||(12712-12921)
[»] scaffold1984 (1 HSPs)
scaffold1984 (62-211)||(334-482)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-167)||(1226-1391)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-211)||(15802-16011)
scaffold0261 (126-159)||(18163-18196)
[»] scaffold0810 (1 HSPs)
scaffold0810 (123-211)||(3196-3284)
[»] scaffold1137 (1 HSPs)
scaffold1137 (74-211)||(2070-2207)
[»] scaffold0475 (1 HSPs)
scaffold0475 (83-211)||(9301-9428)
[»] scaffold0347 (1 HSPs)
scaffold0347 (123-211)||(293-381)
[»] scaffold0075 (2 HSPs)
scaffold0075 (123-211)||(8062-8150)
scaffold0075 (1-133)||(53393-53525)
[»] scaffold1351 (1 HSPs)
scaffold1351 (5-211)||(154-359)
[»] scaffold0175 (1 HSPs)
scaffold0175 (54-211)||(34317-34473)
[»] scaffold0161 (1 HSPs)
scaffold0161 (54-211)||(2213-2369)
[»] scaffold0016 (1 HSPs)
scaffold0016 (123-211)||(207287-207375)
[»] scaffold0420 (1 HSPs)
scaffold0420 (5-207)||(6054-6255)
[»] scaffold0192 (1 HSPs)
scaffold0192 (126-211)||(10178-10263)
[»] scaffold0166 (1 HSPs)
scaffold0166 (123-211)||(9602-9690)
[»] scaffold0080 (2 HSPs)
scaffold0080 (53-211)||(19652-19809)
scaffold0080 (174-211)||(40227-40264)
[»] scaffold0037 (2 HSPs)
scaffold0037 (54-143)||(22509-22598)
scaffold0037 (123-211)||(80100-80188)
[»] scaffold1403 (1 HSPs)
scaffold1403 (46-209)||(739-900)
[»] scaffold0737 (1 HSPs)
scaffold0737 (46-211)||(1565-1729)
[»] scaffold0139 (1 HSPs)
scaffold0139 (46-211)||(38507-38671)
[»] scaffold0046 (1 HSPs)
scaffold0046 (62-166)||(11494-11598)
[»] scaffold0022 (2 HSPs)
scaffold0022 (5-149)||(78470-78614)
scaffold0022 (51-211)||(128738-128896)
[»] scaffold0503 (1 HSPs)
scaffold0503 (174-211)||(12244-12281)
[»] scaffold0221 (1 HSPs)
scaffold0221 (123-211)||(12577-12664)
[»] scaffold0124 (1 HSPs)
scaffold0124 (128-211)||(24419-24502)
[»] scaffold0357 (1 HSPs)
scaffold0357 (121-211)||(15867-15956)
[»] scaffold0006 (4 HSPs)
scaffold0006 (51-148)||(97201-97297)
scaffold0006 (51-148)||(106479-106575)
scaffold0006 (173-211)||(97320-97358)
scaffold0006 (173-211)||(106598-106636)
[»] scaffold0395 (1 HSPs)
scaffold0395 (171-207)||(8265-8301)
[»] scaffold1419 (1 HSPs)
scaffold1419 (171-210)||(335-374)
[»] scaffold0525 (2 HSPs)
scaffold0525 (171-210)||(10643-10682)
scaffold0525 (174-210)||(9485-9521)
[»] scaffold0141 (1 HSPs)
scaffold0141 (171-210)||(33458-33497)
[»] scaffold0049 (1 HSPs)
scaffold0049 (171-210)||(81315-81354)
[»] scaffold0098 (1 HSPs)
scaffold0098 (125-159)||(26855-26889)
[»] scaffold0031 (1 HSPs)
scaffold0031 (177-211)||(20194-20228)
[»] scaffold0026 (1 HSPs)
scaffold0026 (173-211)||(59271-59309)
[»] scaffold0235 (1 HSPs)
scaffold0235 (174-211)||(11283-11320)
[»] scaffold0217 (1 HSPs)
scaffold0217 (174-211)||(16369-16406)
[»] scaffold0142 (1 HSPs)
scaffold0142 (174-211)||(17095-17132)
[»] scaffold0116 (1 HSPs)
scaffold0116 (172-209)||(43555-43592)
[»] scaffold0839 (1 HSPs)
scaffold0839 (123-207)||(1850-1932)
[»] scaffold0104 (2 HSPs)
scaffold0104 (173-209)||(2136-2172)
scaffold0104 (173-209)||(9818-9854)


Alignment Details
Target: scaffold0243 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 6100 - 5890
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6100 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaataacagcaagataaataacttagtttttaacctc 6001  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||| ||| ||||||||||||     
T  6000 caagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgct 5901  T
Q  201 atggcgagttc 211  Q
    | |||||||||    
T  5900 aaggcgagttc 5890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16219694 - 16219485
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16219694 atgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctc 16219595  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||  | ||||||||| ||| |||||||||||||    
T  16219594 caagatcaactaacatcaacttgtgcgacaaagatcgcatttaacct-aacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgcc 16219496  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  16219495 atggcgagttc 16219485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 67887 - 68098
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| ||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  67887 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggctcactgaaacaacaacagcaagataaacaacttagtttctaacct 67986  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  67987 ctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgc 68086  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  68087 catggcgagttc 68098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 811108 - 810898
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  811108 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaactacaacagcaagataaataacttagtttctaacttc 811009  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgc 199  Q
    |||| ||||||  |||||| ||| ||||||||||||||||||||| ||||||||||||| |||||| ||  || ||||||||| ||||||||||||||||    
T  811008 caaggtcaactcacatcaacttgcgcgacaaagatcgcatttaacttaaacaaggcattttgtaacataagta-ctcgcgaggcgagagcctctactcgc 810910  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  810909 catggcgagttc 810898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 47831951 - 47832161
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  47831951 atgtatatacaattatataacattagcgacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacctc 47832050  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | || ||||||||||| |||||||||||||||| ||||| ||||||| |  || |||||||| ||| |||||||||||||    
T  47832051 caagatcaactcacatcaactcgtccgacaaagatcacatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgcc 47832150  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  47832151 atggcgagttc 47832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9389674 - 9389464
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || |||||||||| ||||||||  |||||||||| ||  | |||| |||| |  ||||||||||||||||||||    
T  9389674 atgtatatacaattatataacattatcatcaatattagaatatacaatccaggcttactggaatgacaacatcaaggtcgataacttagtttctaacctc 9389575  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||| |||||||||||| |||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||    
T  9389574 caagatcaactcacatcaactcgtgtgacaaagatcgcttttaacctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgcc 9389475  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  9389474 atggcgagttc 9389464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 16056471 - 16056680
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| |||||||||||  ||| |||||||| ||||||| |||| ||||||||| |||||||||||| |||||    
T  16056471 atgtatatacaattatataacattaacaacaacattagattatatcattcaggcttaccgaaacaacaacatcaagataaacaacttagtttcttacctc 16056570  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | |||| |||||||||||||||||||| ||||||||||| ||||||| | || ||||||||| ||||||||||||||||     
T  16056571 taagatcaactcacatcaactcgtgctacaaagatcgcatttaacct-aacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgct 16056669  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  16056670 atggcgagttc 16056680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 18005789 - 18005999
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  || | |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  18005789 atgtatatacaattatataccattaacaacaacattagatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 18005888  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||   ||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||| |  |||||||| ||| ||||||| ||||    
T  18005889 ctaagatcaactcatatcaacttgtgcgacaaagatcgca-ttatcctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgc 18005987  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  18005988 catggcgagttc 18005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 22073059 - 22073268
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||| |||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||| ||||| ||| ||||||||| || ||||     
T  22073059 atgtatatgcaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacatcaagacaaacaacttagttccttacctg 22073158  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | ||||||||| ||||||||||||||| ||||| ||||| ||||||| | || ||||||||| ||| |||||||||||||    
T  22073159 taagatcaactcacatcaactcgtgcgacaaggatcgcatttaacct-aacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgcc 22073257  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  22073258 atggcgagttc 22073268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 16324174 - 16324358
Alignment:
Q  26 gcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtg 125  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||  |||||| |  ||    
T  16324174 gcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagatcaacaacttagtttctaacctctaagatcaactcacatcaactcatg 16324273  T
Q  126 cgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| |||| |||||||||| ||||||||||| ||||||| |  || |||| ||| ||| ||||||||||||||||||||||||    
T  16324274 cgacaaggatcacatttaacct-aacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttc 16324358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 44014318 - 44014526
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||| ||||||| ||||   ||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  44014318 atgtatatacagttatataccattaaaaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataac-aacttagtttttaacct 44014416  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    |   ||||||||  |||||| | ||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||| |    
T  44014417 ct--gatcaactcacatcaattcgtgcgacaatgatcgcatttaacctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcac 44014514  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  44014515 catggcgagttc 44014526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 15754813 - 15754702
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  15754813 cttactggaatattaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 15754714  T
Q  154 ggcattatgtaa 165  Q
    ||||||||||||    
T  15754713 ggcattatgtaa 15754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 12901468 - 12901681
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttc-ta---a 96  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| | |||||||||||||| |||| ||||||||| ||||||||||| ||   |    
T  12901468 atgtatatacaactatataacattaacaacaacattaaatcatataattcaagcttactgaaacaacaacaacaagataaacaacttagtttcctacgta 12901567  T
Q  97 cctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctact 196  Q
    |||||||||||||||  |||||| | || |||||||  || |||||||||||| |||||  || ||||| | |  | |||| |||| |||||||||||||    
T  12901568 cctccaagatcaactcacatcaactcgtacgacaaatgtcacatttaacctaa-caaggtgttttgtaaatggacaactcgtgaggcgagagcctctact 12901666  T
Q  197 cgccatggcgagttc 211  Q
    ||| |||||||||||    
T  12901667 cgctatggcgagttc 12901681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 15113140 - 15113296
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  15113140 cttactgaaacaataacagcaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 15113238  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||  |||  |       ||||||||| |||||||||||||||| |||||||||||    
T  15113239 ggcatcctgtctcacaaggactcgcgaggcgagagcctctactcgctatggcgagttc 15113296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 28505225 - 28505069
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| | ||| |||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  28505225 cttactggaacattgacaacaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 28505127  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  28505126 ggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 28505069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 11995954 - 11995798
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||  ||| |||||||||| |||| || ||||||||||||||| ||||| ||||  |||||| | |  ||||||||||||||||||||||||| ||    
T  11995954 cttactgggacattaacagcaaggtaaacaaattagtttctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaa-aa 11995856  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||      |||||||||| |||||||||| || ||||||||||||||    
T  11995855 ggcattctgtaacacaaatgctcgcgaggcgagagcctctgcttgccatggcgagttc 11995798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 15116677 - 15116781
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||| | |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  15116677 cttactgaaacaataacagtaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 15116775  T
Q  154 ggcatt 159  Q
    ||||||    
T  15116776 ggcatt 15116781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 34200980 - 34201136
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||  ||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |   ||||  |||||||||||||||||| ||    
T  34200980 cttactgggacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacagggatcgcatttaacctaaa-aa 34201078  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||      ||||||||||  ||||||||| |||||||||||||||||    
T  34201079 ggcattatgtaacacaaacgctcgcgaggcaagagcctctgctcgccatggcgagttc 34201136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 39267502 - 39267414
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||  |||| ||||| |||||||||| |||||||||||||||||    
T  39267502 gtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagt--gctcccgaggcgagagcctctgctcgccatggcgagttc 39267414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 9751406 - 9751318
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||||| |||||||||||||| ||||||      |||||||||| |||||||||| ||| |||||||||||||    
T  9751406 gtgcgacaaagatcgcatttaaactaaacaaggcattctgtaacacaagcgctcgcgaggcgagagcctctgctcaccatggcgagttc 9751318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 2832161 - 2832073
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||| ||||||||||||||||| |||| ||||  ||||||  |||||||||| |||||||||| |||||||||| ||||||    
T  2832161 gtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggtgagttc 2832073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 18302448 - 18302531
Alignment:
Q  128 acaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| |||||||||||||||||||| |||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  18302448 acaaggatcgcatttaacctaaacatggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttc 18302531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 17061815 - 17061729
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | |||||||||| |||| ||||| ||| |  ||||||||| ||||||||||||||||||| ||||||||    
T  17061815 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctctactcgccatcgcgagttc 17061729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 124000 - 123961
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  124000 tagctcgcgaggcgagagcctctactcgccacggcgagtt 123961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 2529909 - 2529866
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac 166  Q
    |||||||||||||||||||||||||||  |||||||| ||||||    
T  2529909 gtgcgacaaagatcgcatttaacctaattaaggcattctgtaac 2529866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 4993798 - 4993837
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  4993798 tagctcgcgaggcgagagcctctactcgccacggcgagtt 4993837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 13395272 - 13395233
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  13395272 tagctcgcgaggcgagagcctctactcgccacggcgagtt 13395233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 48785625 - 48785664
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  48785625 tagctcgcgaggcgagagcctctactcgccacggcgagtt 48785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 12255625 - 12255560
Alignment:
Q  145 cctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||||||||||| |||||||||||    
T  12255625 cctaaacaag-cattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttc 12255560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 12756522 - 12756485
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  12756522 ctcgcgaggcgagagcctctactcgccatggtgagttc 12756485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 26212310 - 26212347
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  26212310 ctcgcgaggcgagagcctctactcgccgtggcgagttc 26212347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 44116820 - 44116857
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  44116820 ctcgcgaggcgagagcctctgctcgccatggcgagttc 44116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 16006732 - 16006768
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  16006732 ctcgcgaggcgagaggctctactcgccatggcgagtt 16006768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 21064964 - 21064932
Alignment:
Q  178 cgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||| |||||||||||||||||||||||||||    
T  21064964 cgaggcgagagcctctactcgccatggcgagtt 21064932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 21743092 - 21743056
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  21743092 ctcgcgaggcgagaggctctactcgccatggcgagtt 21743056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 14234631 - 14234843
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaa--acaataacagcaagataaataacttagtttctaacc 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||  |||| |||| ||||||||||||||||||||||||||    
T  14234631 atgtatatacaattatataacattagcaacaacattagattaaacaattcaggcttactgaacaacaacaacaacaagataaataacttagtttctaacc 14234730  T
Q  99 tccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcg 198  Q
    |||||||||||||| |||||| |||| ||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||| ||| |||||||||||    
T  14234731 tccaagatcaactaacatcaacttgttcgacaaagatcacatttaacctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcg 14234830  T
Q  199 ccatggcgagttc 211  Q
    |||||||||||||    
T  14234831 ccatggcgagttc 14234843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15471068 - 15471277
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  ||||||  |||||| ||| |||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  15471068 atgtatatacaattatataacattaacaacaac-ttagatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttctaacctc 15471166  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||| ||| |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||| |  || || ||||| ||| |||||||||||||    
T  15471167 caagatcatctaacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgcc 15471266  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  15471267 atggcgagttc 15471277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 1465388 - 1465178
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||| |||||||||  || ||| |||||| || |||||  |||||||||| ||  | | || |||| |||||||||||||||||||||||    
T  1465388 atgtatatacaattgtataacattatcatcaacattagaataaacaatccaggcttactggaatgacagcatcaaggtaaataacttagtttctaacctc 1465289  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | |||||||||||||  | |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  1465288 caagatcaactcacatcaactcgtgcgacaaagattacttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgcc 1465189  T
Q  201 atggcgagttc 211  Q
    ||||| |||||    
T  1465188 atggcaagttc 1465178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 16097525 - 16097682
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||||||||| |||||||    
T  16097525 cttactggaacaacaacagcaagataaacaacttagtttctaatctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaa 16097624  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    | |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  16097625 gacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttc 16097682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 32307872 - 32308021
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  32307872 aacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattat 32307971  T
Q  162 gtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  32307972 gtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 32308021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 12171992 - 12171873
Alignment:
Q  92 tctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcct 191  Q
    ||||||||| ||||||||||  |||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  12171992 tctaacctctaagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagatcgcgaggcgagagcct 12171893  T
Q  192 ctactcgccatggcgagttc 211  Q
    |||||||||||||| |||||    
T  12171892 ctactcgccatggccagttc 12171873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 49668009 - 49667852
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||| |||||||||||||||    
T  49668009 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgtatttaacctaaacaa 49667910  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| | ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  49667909 ggcagtctgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 49667852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 13210240 - 13210096
Alignment:
Q  67 taacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac 166  Q
    ||||| ||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||| |||||||||||||||||||||| ||||||    
T  13210240 taacaacaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaaggcattctgtaac 13210141  T
Q  167 tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
          |||||||||| ||||||||||||||||||||||||||||    
T  13210140 acaagtgctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 1644608 - 1644451
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| ||||||||||||| |||||||    
T  1644608 cttactggaacaataacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacttaaacaa 1644509  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| | ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  1644508 ggcagtttgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 1644451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 12934236 - 12934079
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  12934236 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 12934137  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    || | | ||||||  |  || ||||||||| ||||| |||| |||||||||||||||||    
T  12934136 ggaagtctgtaacacaagta-ctcgcgaggcgagagtctctgctcgccatggcgagttc 12934079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 16103971 - 16104088
Alignment:
Q  49 ttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||| ||||  |||||| | |||||||||||| |||||||||||||    
T  16103971 ttagtcttactggaacaacaacagcaagataaacaacttagtttctaacctctaagattaactcacatcaactcgtgcgacaaagagcgcatttaaccta 16104070  T
Q  149 aacaaggcattatgtaac 166  Q
    ||||||||| | ||||||    
T  16104071 aacaaggcagtctgtaac 16104088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 211
Target Start/End: Complemental strand, 37251140 - 37250935
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| || ||||||| ||||| ||||| |||||||| |||||||||||| ||| |||||    
T  37251140 atatacatttatatcacattattaacaacatcaaatcatataattcagacttactggaacaacaacagtaagataaacaacttagtttcttacccccaag 37251041  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatgg 204  Q
    |||||||  |||||| | ||||||||||| || | |||||||| |||||||  || ||||||| |  | ||||||||| |||||||||||||||| ||||    
T  37251040 atcaactcacatcaactcgtgcgacaaaggtcacttttaacct-aacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatgg 37250942  T
Q  205 cgagttc 211  Q
    |||||||    
T  37250941 cgagttc 37250935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 9513104 - 9513261
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| |||| |||| |||||||||||||||||| ||||| ||||  ||| || ||||||||||||||||||||||||| ||| |||    
T  9513104 cttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactcacataaacttgtgcgacaaagatcgcatttaacataagcaa 9513203  T
Q  154 ggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||  || ||| |  || ||||| |||||||||| |||||||||| ||||||    
T  9513204 ggcattctgtaacacaagtaa--tctcgaggcgagagcctctgctcgccatggtgagttc 9513261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 9521079 - 9521236
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||| |||| |||| |||||||||||||||||| ||||| ||||  ||| || ||||||||||||||||||||||||| ||| |||    
T  9521079 cttactggaacaataacaacaaggtaaacaacttagtttctaacctctaagattaactcacataaacttgtgcgacaaagatcgcatttaacataagcaa 9521178  T
Q  154 ggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||  || ||| |  || ||||| |||||||||| |||||||||| ||||||    
T  9521179 ggcattctgtaacacaagtaa--tctcgaggcgagagcctctgctcgccatggtgagttc 9521236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 22110287 - 22110119
Alignment:
Q  42 atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatt 141  Q
    |||||||| |||||||||||||||| ||||| |||||||  |||||||||||| |||  || ||||||||  |||||| | ||||||||||| || ||||    
T  22110287 atacaattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttaccctcatgatcaactcacatcaattcgtgcgacaaaggtcacatt 22110188  T
Q  142 taacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
     ||||| |||||||  || |||  ||  | ||||||||||| |||||||||||||||| |||||||||||    
T  22110187 aaacct-aacaaggtgttctgtccctcttgagctcgcgaggcgagagcctctactcgctatggcgagttc 22110119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 49389554 - 49389453
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||| |||||||||   |||||| | ||||||||| |||||||||||||||||||||    
T  49389554 cttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaacacacatcaactcgtgcgacaaggatcgcatttaacctaaacaa 49389455  T
Q  154 gg 155  Q
    ||    
T  49389454 gg 49389453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 12340017 - 12340105
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  12340017 gtgcgacaaagatcacatttaacctaaacaaggcattatgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 12340105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 14669025 - 14669113
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||| ||||||||||||||||||||| ||||  ||||||  ||||||||||||||||||||| |||||||||||||||||    
T  14669025 gtgcgacaaagatcgaatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggtgagagcctctgctcgccatggcgagttc 14669113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 14665870 - 14665958
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||| ||||||||    
T  14665870 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccattgcgagttc 14665958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 14735383 - 14735471
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||| ||||||||    
T  14735383 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccattgcgagttc 14735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 43927322 - 43927484
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| |    
T  43927322 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatc 43927421  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    || ||||||| ||| |||  |      |||||||||| |||||||||||||||| |||||||||    
T  43927422 ct-aacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatggcgagt 43927484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 211
Target Start/End: Original strand, 324481 - 324587
Alignment:
Q  104 gatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatg 203  Q
    ||||||||  |||||| |||| |||||||| || |||||||||||| |||||  || ||||||| | || ||||||||| |||||||||||||||| |||    
T  324481 gatcaactcacatcaacttgtacgacaaaggtcacatttaacctaa-caaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatg 324579  T
Q  204 gcgagttc 211  Q
    ||||||||    
T  324580 gcgagttc 324587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 42386726 - 42386763
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42386726 ctcgcgaggtgagagcctctactcgccatggcgagttc 42386763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 165
Target Start/End: Complemental strand, 4588644 - 4588602
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa 165  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  4588644 gtgcgacaaagctcgcatttaacctaaacaaggcattctgtaa 4588602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 14572903 - 14572940
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  14572903 ctcgcgaggcgagagcctctactcgccatggcgagttc 14572940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 53070504 - 53070467
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  53070504 ctcgcgaggcgagagcctctactcgccatggcgagttc 53070467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 2034791 - 2034752
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  2034791 tagctcgcgaggcgagagcctctactcgccacggcgagtt 2034752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 2038298 - 2038259
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  2038298 tagctcgcgaggcgagagcctctactcgccacggcgagtt 2038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 2042039 - 2042000
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  2042039 tagctcgcgaggcgagagcctctactcgccacggcgagtt 2042000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 14038489 - 14038528
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  14038489 tagctcgcgaggcgagagcctctactcgccacggcgagtt 14038528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 14041957 - 14041996
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  14041957 tagctcgcgaggcgagagcctctactcgccacggcgagtt 14041996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 18959206 - 18959245
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  18959206 tagctcgcgaggcgagagcctctactcgccacggcgagtt 18959245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 23083167 - 23083132
Alignment:
Q  175 tcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||| |||||||||||||||||||||||||||    
T  23083167 tcgcgaggcgagagcctctactcgccatggcgagtt 23083132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 39231036 - 39231075
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  39231036 tagctcgcgaggcgagagcctctactcgccacggcgagtt 39231075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 11424570 - 11424532
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  11424570 gctcgcgaggcgagagcctctactcgccgtggcgagttc 11424532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 17248092 - 17248055
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  17248092 ctcgcgaggcgagagcctctgctcgccatggcgagttc 17248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 606176 - 606136
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  606176 tagctcgcgaggcgaggacctctactcgccatggcgagttc 606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 11855032 - 11855068
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  11855032 gctcgcgaggtgagagcatctgctcgccatggcgagt 11855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 20723297 - 20723333
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||||| |||||| |||||||||||||||||||    
T  20723297 gctcgcgaggcgagagcatctactcgccatggcgagt 20723333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 30030153 - 30030189
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  30030153 ctcgcgaggcgagagcctctgctcgccatggcgagtt 30030189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 54973700 - 54973736
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  54973700 ctcgcgaggcgagaggctctactcgccatggcgagtt 54973736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 54976310 - 54976346
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  54976310 ctcgcgaggcgagaggctctactcgccatggcgagtt 54976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 54978920 - 54978956
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  54978920 ctcgcgaggcgagaggctctactcgccatggcgagtt 54978956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 139; Significance: 6e-73; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 21329474 - 21329264
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||| |||||    
T  21329474 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaacaacttagtttcttacctc 21329375  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||     
T  21329374 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgct 21329275  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  21329274 atggcgagttc 21329264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 34 - 211
Target Start/End: Complemental strand, 21741489 - 21741312
Alignment:
Q  34 attagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||| ||||||||  |||||||||| ||  | |||| |||| ||| ||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  21741489 attagaatatacaatccaggcttactggaatgacaacatcaaggtaattaacttagtttctaacctccaagatcaactcacatcaactcgtgcgacaaag 21741390  T
Q  134 atcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| ||||||||||||||| |||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  21741389 atcgcttttaacctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttc 21741312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 21502133 - 21501923
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagttt-ctaacc 98  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| |||||||||| |||||     
T  21502133 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagttttctaact 21502034  T
Q  99 tccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcg 198  Q
    |||||||||||||| |||||| | |||||||||| |||||||||||||  ||||||||||| || |||| | || ||||||||| |||||||||||||||    
T  21502033 tccaagatcaactaacatcaactcgtgcgacaaatatcgcatttaacc-caacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcg 21501936  T
Q  199 ccatggcgagttc 211  Q
    | |||||||||||    
T  21501935 ctatggcgagttc 21501923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 26012012 - 26011803
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||   |||||| || |||||||| | || |||||||||||||||| || | ||||||||| ||||||||||||||||||    
T  26012012 atgtatatacaattatataacatcaacaacaacatcagattatatagttcaggcttactgaaacaacaataacaagataaacaacttagtttctaacctc 26011913  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||| |||||||||| |||||||||| ||||| ||||| |||||||||  | ||||||||| ||  |||||||||||||    
T  26011912 caagatcaactcacatcaactcgtgtgacaaagatcacatttaacct-aacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgcc 26011814  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  26011813 atggcgagttc 26011803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 22959459 - 22959302
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| ||||| |||| ||||||| ||||||||||  |||||| |||||| ||||  ||||||||||||||||||||    
T  22959459 cttactggaacaaaaacaacaagataaacaacttggtttttaacctctaagatcaactcacatcaacttgtgcaacaagaatcgcatttaacctaaacaa 22959360  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22959359 ggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttc 22959302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 21565747 - 21565896
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||| || |||||||| |||| |    
T  21565747 aacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattttacataaacaagtcattct 21565846  T
Q  162 gtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  21565847 gtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttc 21565896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 19669094 - 19669251
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| |||||||||  ||||||||||||||||| ||||||||||  |||||| |||||||||||  ||| |||||| |||||||||    
T  19669094 cttactggaacaacaacaacaagataaacgacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaagaatcacatttatcctaaacaa 19669193  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||||||||||| | |||| |||||||||||| |||||||||||||||    
T  19669194 ggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttc 19669251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 5889032 - 5888944
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| ||||||||||||||||||||||||||||    
T  5889032 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttc 5888944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 19660762 - 19660606
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||| ||||| |||||||| ||    
T  19660762 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagattgcattcaacctaaa-aa 19660664  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||| || ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  19660663 ggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 19660606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 22120049 - 22119961
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  22120049 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 22119961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 20026917 - 20026760
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||| ||||  |||||| |||| |  ||| |||| ||||||||||||||||  ||| ||||||||| |||||||||||| |||||    
T  20026917 atgtatatacaactatatagcattatcaacaacattaaaacatataattcaggcttactgaaacaactacaacaagataaacaacttagtttcttacctc 20026818  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||| | | ||||||||| | || ||||||| || |||||||||||    
T  20026817 taagatcaactcacatcgactcgtgcgacaacggtcacatttaagct-aacaaggcatt 20026760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 24767193 - 24767105
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| ||||||||| |||||||    
T  24767193 gtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatgacgagttc 24767105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 21871426 - 21871342
Alignment:
Q  124 tgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||| |||||| |||||||||  ||||||||| ||||  | |||||||||||||  | ||||||||||||||||||||||||    
T  21871426 tgcgacaaggatcgcgtttaacctag-caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagt 21871342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 21875706 - 21875622
Alignment:
Q  124 tgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||| |||||| |||||||||  ||||||||| ||||  | |||||||||||||  | ||||||||||||||||||||||||    
T  21875706 tgcgacaaggatcgcgtttaacctag-caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagt 21875622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 36154683 - 36154597
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | |||||||||| |||| ||||| ||| |  ||||||||| ||||||||||||||||||||||||||||    
T  36154683 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaaataggtcactcgcgaggcgagagcctctactcgccatggcgagttc 36154597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 22178151 - 22178064
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaag 133  Q
    |||||||| |||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||| |||||||    
T  22178151 aatttaggtttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgtgacaaag 22178064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 25744035 - 25744073
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  25744035 gctcgcgaggcgagagcctctactcgccatggcgagttc 25744073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 25431709 - 25431746
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  25431709 ctcgcgaggtgagagcctctactcgccgtggcgagttc 25431746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 22144316 - 22144402
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | |||||||||| |||| ||||||| |  | ||||||||| |||||||||||||||| |||||||||||    
T  22144316 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttc 22144402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 4398019 - 4398058
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  4398019 tagctcgcgaggcgagagcctctactcgccacggcgagtt 4398058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 16255743 - 16255704
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16255743 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16255704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 16259376 - 16259337
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16259376 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16259337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22589540 - 22589501
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22589540 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22589501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22593095 - 22593056
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22593095 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22593056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22596650 - 22596611
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22596650 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22596611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 22880519 - 22880558
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22880519 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22880558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 23693769 - 23693808
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  23693769 tagctcgcgaggcgagagcctctactcgccacggcgagtt 23693808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 26360893 - 26360854
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  26360893 tagctcgcgaggcgagagcctctactcgccacggcgagtt 26360854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 43121474 - 43121513
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  43121474 tagctcgcgaggcgagagcctctactcgccacggcgagtt 43121513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 43125007 - 43125046
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  43125007 tagctcgcgaggcgagagcctctactcgccacggcgagtt 43125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 1096782 - 1096819
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  1096782 ctcgcgaggcgagagcctctactcgccgtggcgagttc 1096819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 11581051 - 11581014
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  11581051 ctcgcgaggcgagagcctctgctcgccatggcgagttc 11581014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 25421847 - 25421884
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  25421847 ctcgcgaggcgagagcctctactcgccgtggcgagttc 25421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 23501154 - 23501118
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  23501154 gctcgcgaggtgagagcatctgctcgccatggcgagt 23501118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 26496199 - 26496235
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26496199 ctcgcgaggcgagaggctctactcgccatggcgagtt 26496235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 29325027 - 29324991
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29325027 ctcgcgaggcgagaggctctactcgccatggcgagtt 29324991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 1011 - 802
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  1011 atgtatatacaattatataacattagcaacaacattagatt-tacaattcaggcttactgaaacaacaacaacaagataaataacttagtttctaacttc 913  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||| ||| ||||||||||||     
T  912 caagatcaactaacatcaacttgcgcgacaaagatcgcatttaacctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgct 813  T
Q  201 atggcgagttc 211  Q
    | |||||||||    
T  812 aaggcgagttc 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13083 - 13292
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  13083 atgtatatacaattatataacattagcaacaacattagattatccaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaatctc 13182  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    || ||||||||  |||||| | ||| |||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||| ||| |||||||||||||    
T  13183 catgatcaactcacatcaactcgtgtgacaaagatcacatttaacct-aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgcc 13281  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  13282 atggcgagttc 13292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 18169 - 18005
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||  ||||||  |||||||||||| ||| ||| ||||| ||  |||||| | ||||||||||| || ||||||||    
T  18169 aattcaggcttactgaaacaacaacagtgagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtgcgacaaaggtcacatttaac 18070  T
Q  146 ctaaacaaggcattatg--taactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    || ||||||| ||| ||  | |||||   |||||||||| ||||||||| |||||| |||||||||||    
T  18069 ct-aacaaggtattctgtctcactag--ggctcgcgaggcgagagcctccactcgctatggcgagttc 18005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 22921847 - 22921636
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  22921847 atgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 22921748  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| | |||||||||||||||||||||||| |||||||||||| |||||||||  || |||||||| ||||||||||||||||    
T  22921747 ctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacccaaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgc 22921648  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  22921647 catggcgagttc 22921636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 35981665 - 35981455
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||| |||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| ||||||||||||||||||||||||||||    
T  35981665 atgtatatgcaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaagataaataacttagtttctaacctc 35981566  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||    
T  35981565 caagatcaactcacatcaattcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcacc 35981466  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  35981465 atggcgagttc 35981455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 49261483 - 49261690
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| |||||||||  ||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  49261483 atgtatatacaattatataacattatcatcaacattagaatatacaattccggcttactggaaggacaacatcaaggtaaataacttagtttctaacctc 49261582  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||||    
T  49261583 caagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgcc 49261682  T
Q  201 atggcgag 208  Q
    ||||||||    
T  49261683 atggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 20636992 - 20637202
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||| |  |||||||| |||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  20636992 atgtatatacaattatataacattatcatcaacattaaaaaatacaattcaggcttactggaatgacaacatcaaggtaaataacttagtttctaacctc 20637091  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| |  ||||||||||||||| ||||||||||||||| |||| |||||||  ||||||||||||| |||||||||||||||||    
T  20637092 caagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgcc 20637191  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  20637192 atggcgagttc 20637202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 63 - 211
Target Start/End: Original strand, 20248481 - 20248629
Alignment:
Q  63 acaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatg 162  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||| |  |||||| |||||||||||  ||||||||||||||||| |||||||| ||    
T  20248481 acaacaacatcaagataaataacttagtttctaacctctaagatcaatttacatcaacttgtgcgacaagaatcgcatttaacctaaataaggcattctg 20248580  T
Q  163 taactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  20248581 taactagttagctcgcgaggcgatagcctctactcgccatggcgagttc 20248629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 22237841 - 22237982
Alignment:
Q  70 cagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactag 169  Q
    |||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||| |||||||||||||||||||||||||||||| |||||||||    
T  22237841 cagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgaaaaagatcgcatttaacctaaacaaggcattctgtaactag 22237940  T
Q  170 ttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    | |  |||||||| ||| ||||||||||||||||||||||||    
T  22237941 tcaattcgcgaggcgagggcctctactcgccatggcgagttc 22237982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 52927906 - 52927750
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| || ||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||||||| |||||    
T  52927906 cttactggaacaacaatagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacct-aacaa 52927808  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||| || |  |||||||| ||| ||||||||||||||||||||||||    
T  52927807 ggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttc 52927750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 33681212 - 33681361
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | ||| ||||||||||||||||||| ||| ||||||| | |    
T  33681212 aacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgtgacaaagatcgcatttaacataagcaaggcactct 33681311  T
Q  162 gtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| | ||  |||||||| |||||||||| |||||||||||||||||    
T  33681312 gtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttc 33681361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 21754232 - 21754388
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||  |||||||||  |||||| | ||||||||| |||| |||||||||| |||||    
T  21754232 cttactggaacaatgacagcaagataaacaacttagtttctaacctctgagatcaactcacatcaactcgtgcgacaaggatcacatttaacct-aacaa 21754330  T
Q  154 ggcattatgt--aactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| | |||  ||| |||   ||||||||| |||||||||| |||||||||||||||||    
T  21754331 ggcagtctgtaaaacaagt--actcgcgaggcgagagcctctgctcgccatggcgagttc 21754388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21861546 - 21861389
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||  ||| |||||||||||||||| || ||||||||||| |||||||||||| |||||    
T  21861546 atgtatatacaattatatcacattataaacaacatcatatcataatattcaggcttactgaaacaacaatagcaagataaacaacttagtttcttacctc 21861447  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||||||||||  || |||||||||| |||||||||||    
T  21861446 taagatcaactcacatcaactcgtgcgacaaatgtcacatttaacct-aacaaggcatt 21861389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 12271744 - 12271848
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || |||||||||| |||||    
T  12271744 cttactgaaacaataacagcaggataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 12271842  T
Q  154 ggcatt 159  Q
    ||||||    
T  12271843 ggcatt 12271848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 20918798 - 20918954
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| ||||| |||| ||||  ||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  20918798 cttactggaacattaacaacaaggtaaacgacttagtttctaacctctaagatcaactcacatcaagtcgaacgacaaagatcgcattcaacctaaa-aa 20918896  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| | ||||     ||||||||||| |||||||||| |||||||||||||||||    
T  20918897 ggcattctttaacacacaagctcgcgaggcgagagcctctgctcgccatggcgagttc 20918954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 28194305 - 28194217
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||| ||||||||||||| |||| ||||| | | |||||||||||| ||||||||||||| ||||||||||||||    
T  28194305 gtgcgacaaagatcgcatgtaacctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttc 28194217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 21896232 - 21896078
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||  ||| |||||||||||||||| ||||   ||||||| |||||||||||| || ||    
T  21896232 atgtatatacaattatatcacattataaacaacatcaaatcataatattcaggcttactgaaacaacaaca---agataaacaacttagtttcttacatc 21896136  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
     ||||||||||  |||||| | ||||||||||| || |||||||||| |||||||||||    
T  21896135 taagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggcatt 21896078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 16368259 - 16368115
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||| |||||| ||||| ||| | | |    
T  16368259 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataaacaacttaatttcttacccctatg 16368160  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | ||||||||||| || ||||||||||||    
T  16368159 atcaactcacatcaactcgtgcgacaaaggtcacatttaacctaa 16368115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 50686761 - 50686963
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| ||  ||| ||| |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| |    
T  50686761 atatacatttatatcacattattaacaacatcggatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatg 50686860  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatgg 204  Q
    |||||||  | |||| | ||||||||||| || |||||| ||| ||||||| ||| |||  |      |||||||||| |||||||||||||||| ||||    
T  50686861 atcaactcacgtcaactcgtgcgacaaaggtcacatttatcct-aacaaggtattctgtctcacaggggctcgcgaggcgagagcctctactcgctatgg 50686959  T
Q  205 cgag 208  Q
    ||||    
T  50686960 cgag 50686963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 26065205 - 26065292
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | ||||||||||| ||| ||||||| |  | ||||||||| |||||||||||||||| |||||||||||    
T  26065205 gtgcgacaaagatcgcaaa-accctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttc 26065292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 14432162 - 14432123
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  14432162 tagctcgcgaggcgagagcctctactcgccacggcgagtt 14432123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 20631628 - 20631667
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  20631628 tagctcgcgaggcgagagcctctactcgccacggcgagtt 20631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22900061 - 22900022
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22900061 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22900022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 24087727 - 24087766
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  24087727 tagctcgcgaggcgagagcctctactcgccacggcgagtt 24087766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 36181887 - 36181926
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  36181887 tagctcgcgaggcgagagcctctactcgccacggcgagtt 36181926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 37358780 - 37358819
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  37358780 tagctcgcgaggcgagagcctctactcgccacggcgagtt 37358819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 45307602 - 45307641
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  45307602 tagctcgcgaggcgagagcctctactcgccacggcgagtt 45307641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 433322 - 433359
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  433322 ctcgcgaggcgagagcctctgctcgccatggcgagttc 433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 20135502 - 20135539
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  20135502 ctcgcgaggtgagagcttctgctcgccatggcgagttc 20135539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 38801198 - 38801161
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  38801198 ctcgcgaggcgagagcctctactcgccgtggcgagttc 38801161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 16758947 - 16759003
Alignment:
Q  155 gcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| |||||||||  | ||||||||||||| ||||||||| || |||||||||||    
T  16758947 gcattctgtaactaggcaactcgcgaggtgagggcctctacttgctatggcgagttc 16759003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 20579779 - 20579815
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  20579779 ctcgcgaggcgagaggctctactcgccatggcgagtt 20579815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 21162079 - 21162115
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||||| |||||||||| |||||||||||||||    
T  21162079 gctcgcgaggcgagagcctctgctcgccatggcgagt 21162115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 15190459 - 15190667
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| |||| ||||||||||||||||||||| |    
T  15190459 atgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaataacttagtttctaacccc 15190558  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  15190559 caagatcaactcacatcaactcgtgcgacaaagatcgcttttaacctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgcc 15190658  T
Q  201 atggcgagt 209  Q
    |||||||||    
T  15190659 atggcgagt 15190667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15099492 - 15099702
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  || ||| |||||| ||||||||  |||||||||| ||  | |||| |||| |||||||||||||||||||||||    
T  15099492 atgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaatgacaacatcaaggtaaataacttagtttctaacctc 15099591  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| |  ||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||    
T  15099592 caagatcaactcacatcaactcatgcgacaaagatcgcttttaacctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgcc 15099691  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  15099692 atggcgagttc 15099702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 39706266 - 39706056
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||| |||| ||||||||| |||||| |||||||||||||| |||||| || |||| |||    
T  39706266 atgtatatacaattatataacattagcaacaacattagatcatataattcaggcttactaaaacaacaacagcaagataaacaacttaattcctaatctc 39706167  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||||||||||||||||||||||||||||||| ||||| ||||||| |  || |||||||| ||| |||||||||||||    
T  39706166 caagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgcc 39706067  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  39706066 atggcgagttc 39706056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 8846569 - 8846725
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||  ||||||||| |||||||||||||| ||| ||| ||||||  |||||| | ||||||||||||||||||||||| |||||||    
T  8846569 cttactggaacaacaactacaagataaacaacttagtttctaatctctaagttcaactcacatcaactcgtgcgacaaagatcgcatttaacataaacaa 8846668  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8846669 gacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagtt 8846725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 12288186 - 12287977
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  |||||    
T  12288186 atgtatatacaactatataacattaccaacaacattaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacctc 12288087  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| || |||||||||  || |||| ||||| ||||| |  ||||||  ||  | ||||||||||| |||||| |||||||||     
T  12288086 caagatcaactcacatcaacttatgcgacaaaagtcacattaaacct-aacaaagtgttatgtctctcttgagctcgcgaggcgagagcttctactcgct 12287988  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  12287987 atggcgagttc 12287977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 12774194 - 12774351
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||||||||||||||||||||    
T  12774194 cttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaa 12774293  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| | ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  12774294 ggcagtctgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 12774351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 24029006 - 24029094
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  24029006 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 24029094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 3332151 - 3332238
Alignment:
Q  124 tgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  3332151 tgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 3332238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 22634075 - 22633981
Alignment:
Q  117 caaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  22634075 caaatcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttc 22633981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 16596789 - 16596998
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   | ||| ||||  |||||    | || ||||||  |||| |||||||||| |||| ||||||||||||||||||    
T  16596789 atgtatatacaattatataacattataagcaacattaatttataagcatcagtcttacttgaacattaacagcaaggtaaacaacttagtttctaacctc 16596888  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | |  ||||||||||| |||| |||||||| |||||||| ||||||      || |||| || |||| ||||||||||||    
T  16596889 taagatcaactcacatcaactcgaacgacaaagatcacattcaacctaaa-aaggcattctgtaacacaaacgcccgcggggcgagaacctctactcgcc 16596987  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  16596988 atggcgagttc 16596998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 20157146 - 20157058
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||| | ||||  ||||||  |||||||||| |||||||||| | |||||||||||||||    
T  20157146 gtgcgacaaagatcgcatttaacctaaacaaggcactctgtaatactagt--gctcgcgaggcgagagcctctgcacgccatggcgagttc 20157058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 13812665 - 13812578
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||||| |||||||||||||||| ||||| ||||  ||||||  |||||||||| |||||||||| ||||||||||||||||    
T  13812665 gtgcgacaaagatcacatttaacctaaacaaagcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagtt 13812578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 46640387 - 46640285
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| ||| |||||||||||||||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || ||||||||    
T  46640387 aattcaggtttactgaaacaataacagtaagataagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttaac 46640289  T
Q  146 ctaa 149  Q
    ||||    
T  46640288 ctaa 46640285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 53082124 - 53081979
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttc-taacctccaa 103  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||  ||||||||||| || || ||||    
T  53082124 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttaccccccaa 53082025  T
Q  104 gatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    ||||||||  |||||| | ||||||||||  || ||||||||||||    
T  53082024 gatcaactcacatcaactcgtgcgacaaatgtcacatttaacctaa 53081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 15552039 - 15552166
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    |||||||||||||||||| ||||||||||  |||||| | |  ||||||||||||||||| ||||||| ||| |||| ||||||      ||||||||||    
T  15552039 aacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattttacctaaa-aagacattttgtaacaccaatgctcgcgagg 15552137  T
Q  183 tgagagcctctactcgccatggcgagttc 211  Q
     | |||||||| |||||| ||||||||||    
T  15552138 cgcgagcctctgctcgccgtggcgagttc 15552166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 21815108 - 21815071
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21815108 ctcgcgaggcgagagcctctactcgccatggcgagttc 21815071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 21815437 - 21815400
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21815437 ctcgcgaggcgagagcctctactcgccatggcgagttc 21815400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 21818530 - 21818493
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21818530 ctcgcgaggcgagagcctctactcgccatggcgagttc 21818493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 13827 - 13695
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||||| ||||  ||||  |||||||| |||||||||||| |||||    
T  13827 atgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataaagataaacaacttagtttcttacctc 13728  T
Q  101 caagatcaactagcatcaaattgtgcgacaaag 133  Q
     ||||||||||  |||||| | |||||||||||    
T  13727 taagatcaactcacatcaactcgtgcgacaaag 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 44928778 - 44928692
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | |||||||||| |||| ||||||| | |  ||||||||| |||||||||| |||||||||||||||||    
T  44928778 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttc 44928692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 52243048 - 52242962
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||   | |||||||||| |||| ||||||| |  | ||||||||| |||||||||||||||| |||||||||||    
T  52243048 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttc 52242962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 287402 - 287441
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  287402 tagctcgcgaggcgagagcctctactcgccacggcgagtt 287441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 16359815 - 16359854
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16359815 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16359854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 31116861 - 31116822
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  31116861 tagctcgcgaggcgagagcctctactcgccacggcgagtt 31116822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 55502556 - 55502517
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  55502556 tagctcgcgaggcgagagcctctactcgccacggcgagtt 55502517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 15464764 - 15464698
Alignment:
Q  145 cctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||| ||||||| |  | ||||||||| |||||||||||||||| |||| ||||||    
T  15464764 cctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttc 15464698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 32851642 - 32851676
Alignment:
Q  125 gcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    ||||||||||||||||||||||||||| |||||||    
T  32851642 gcgacaaagatcgcatttaacctaaaccaggcatt 32851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 7089191 - 7089228
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  7089191 ctcgcgaggcgagagcctctgctcgccatggcgagttc 7089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 13844852 - 13844885
Alignment:
Q  172 agctcgcgaggtgagagcctctactcgccatggc 205  Q
    ||||||||||| ||||||||||||||||||||||    
T  13844852 agctcgcgaggcgagagcctctactcgccatggc 13844885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 17047879 - 17047842
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  17047879 ctcgcgaggcgagagcctctgctcgccatggcgagttc 17047842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 44102525 - 44102562
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  44102525 ctcgcgaggcgagagcctctgctcgccatggcgagttc 44102562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 4171338 - 4171374
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  4171338 ctcgcgaggcgagaggctctactcgccatggcgagtt 4171374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 14699030 - 14699066
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  14699030 ctcgcgaggcgagaggctctactcgccatggcgagtt 14699066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 10671 - 10880
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||  |||||| ||||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  10671 atgtatatacaattatatgacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcttacctc 10770  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | |||||||| |||||||||||||||| ||||||||||| || |||||| || ||||||||| ||||||||||||||||     
T  10771 taagatcaactcacatcaactcgtgcgacagagatcgcatttaacct-aacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgct 10869  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  10870 atggcgagttc 10880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 32679 - 32888
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  ||| || ||||||||||| |||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  32679 atgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaataacaacaagataaacaacttagtttcttacctc 32778  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | ||||||||||||||||||||||||  ||||||||||| ||||||| | |||||||||||| ||| |||||||||||||    
T  32779 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaacc-caacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgcc 32877  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  32878 atggcgagttc 32888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 5e-61; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 6520511 - 6520716
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6520511 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaacctc 6520610  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| |  ||| |||||||||||||||||||| ||||| ||||| ||||| | |  || | |||||| ||| |||||||||||||    
T  6520611 caagatcaactcacatcaactcatgcaacaaagatcgcatttaacct-aacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgcc 6520709  T
Q  201 atggcga 207  Q
    |||||||    
T  6520710 atggcga 6520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 38855229 - 38855019
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||| ||||  ||    
T  38855229 atgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaacaacttagttcctaatgtc 38855130  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    ||||||||| |  |||||| | |||||||||||||||  |||||||||| ||||||||| ||||||| |  |  |||||||| ||| |||||||||||||    
T  38855129 caagatcaattcacatcaactcgtgcgacaaagatcgtgtttaacctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgcc 38855030  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  38855029 atggcgagttc 38855019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 26355616 - 26355467
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    ||||||||||  |||||||| |||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||| |    
T  26355616 aacaataacaaaaagataaacaacttagtttctaacctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttaacataaacaaggcattct 26355517  T
Q  162 gtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  26355516 gtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttc 26355467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 21285741 - 21285950
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||| ||||  |||||||||||||||||| |||| |||||||||||||||| |||| |||||||||  ||||||||||| |||||    
T  21285741 atgtatatacaattatatatcattaacaacaatattagattatataattcaggcttactgaaacaacaacaacaagataaagcacttagtttcttacctc 21285840  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | |||||| |||||||||||||||||| ||||| ||||| ||||||| |  | || |||||| ||| |||||||||||||    
T  21285841 taagatcaactcacatcaactcgtgcgataaagatcgcatttaacct-aacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgcc 21285939  T
Q  201 atggcgagttc 211  Q
    || ||||||||    
T  21285940 atagcgagttc 21285950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 21673847 - 21674057
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| | |||||||||||||| |||| ||||||||  |||||||||| ||||||    
T  21673847 atgtatatacaattatataccattaacaacaacattagatcatattaattcaagcttactgaaacaacaacaacaagataac-aacttagtttttaacct 21673945  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | || |||||||  ||| || ||||||||||||||||||||||| ||||||||||||||| |||||| ||| |  |||||||| ||| ||||||||||||    
T  21673946 ctaatatcaactcacattaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgc 21674045  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  21674046 catggcgagttc 21674057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 23760822 - 23760609
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattataca-atttaggcttactgaaacaataacagcaaga---taaataacttagtttctaa 96  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||   ||| |||||||||||||||| |||| ||| |   |||| |||||||||| |||    
T  23760822 atgtatatacaattatataccattaacaacaacattagatcatatttattcaggcttactgaaacaacaacaacaacaaggtaaacaacttagtttttaa 23760723  T
Q  97 cctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctact 196  Q
    |||| ||||||||||  |||||| ||||||||||||||||||||||| ||| ||||||||||| |||||||||| |  |||||||| ||| |||||||||    
T  23760722 cctctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcct-aacaaggcattttgtaactagtcaattcgcgaggcgagggcctctact 23760624  T
Q  197 cgccatggcgagttc 211  Q
    |||| |||| |||||    
T  23760623 cgccttggcaagttc 23760609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 5866201 - 5866045
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  5866201 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 5866103  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  5866102 ggcattctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 5866045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 17141110 - 17141266
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |   ||||||||||||||| |||||||| ||    
T  17141110 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaatgacaaagatcgcattcaacctaaa-aa 17141208  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||| || ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  17141209 ggcgttctgtaacacaaacgctcgcgaggcgagagcctctgctcgccatggcgagttc 17141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 39834100 - 39834184
Alignment:
Q  127 gacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||| ||||||||| ||| ||||| | | |||||||||||| ||||||||||||||||||||||||||||    
T  39834100 gacaaagatcgcatttaacttaaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttc 39834184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 21249607 - 21249734
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    ||||||||| |||||||| ||||| ||||  |||||| |||  ||||||||||||||||||||||||| |||||||| ||||||      ||||||||||    
T  21249607 aacttagttcctaacctctaagataaactcacatcaacttgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaacacaaatgctcgcgagg 21249705  T
Q  183 tgagagcctctactcgccatggcgagttc 211  Q
     |||||||||| |||||||||||||||||    
T  21249706 cgagagcctctgctcgccatggcgagttc 21249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 21491189 - 21491344
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  ||| || | |  | |||||||||||||| |||||||| ||    
T  21491189 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacattaactcgaactacaaagatcgcattcaacctaaa-aa 21491287  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||| ||||||      ||||||||||  ||||||||||||||||||||| ||||    
T  21491288 ggcattctgtaacacaaacgctcgcgaggcaagagcctctactcgccatggcaagtt 21491344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 20498707 - 20498915
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||| ||||||  |||| ||||||||| |||||||||||| |||||    
T  20498707 atgtatatacaattatatcacattataaacaacatcaaatcatatacatcagtcttaccgaaacatcaacatcaagataaacaacttagtttcttacctc 20498806  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||| ||||||| || || | ||||| |||||||  || |||  ||  | ||||||||||| ||||||||||||||||     
T  20498807 caagatcaactcacatcaactcgtgtgacaaaggtcacaataaacct-aacaaggtgttctgtctctcatgagctcgcgaggcgagagcctctactcgct 20498905  T
Q  201 atggcgagtt 210  Q
    ||||||||||    
T  20498906 atggcgagtt 20498915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 21255445 - 21255572
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagtta-gctcgcgag 181  Q
    ||||||||| |||||||| ||||| ||||  |||||| | |  ||||||||||||||||||||||||| |||||||| ||||| ||   | |||||||||    
T  21255445 aacttagttcctaacctctaagataaactcacatcaactcgaacgacaaagatcgcatttaacctaaa-aaggcattctgtaa-tacaaatgctcgcgag 21255542  T
Q  182 gtgagagcctctactcgccatggcgagttc 211  Q
    | ||||||| || |||||||||||||||||    
T  21255543 gcgagagccgctgctcgccatggcgagttc 21255572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 983382 - 983248
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaa---gataaataacttagtttctaac 97  Q
    |||||||||||  |||||||||||  |||||| |||  || ||| |||| || ||||||||||||| |||| |||   |||||| |||||||||||  ||    
T  983382 atgtatatacagctatataacattatcaacaacattcaatcatataattcagacttactgaaacaacaacaacaacatgataaacaacttagtttcctac 983283  T
Q  98 ctccaagatcaactagcatcaaattgtgcgacaaa 132  Q
    ||||||||||||||   ||||| | ||||||||||    
T  983282 ctccaagatcaactcatatcaactcgtgcgacaaa 983248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 17266965 - 17266821
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| ||||| |||||||||| ||||| |||||||  |||||||||||| ||| ||  |    
T  17266965 atatacatttatatcacattattaacaacatcaaatcatataattcaggctcactgaaacaacaacagtaagataagcaacttagtttcttacccccgtg 17266866  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| | |||||| |||| || ||||||||||||    
T  17266865 atcaactcacatcaactcgtgcgataaaggtcacatttaacctaa 17266821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 22364851 - 22364954
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||| | | | ||  ||||||||  |||||| | ||||||||||| || ||||||||    
T  22364851 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttattatccccctgatcaactcacatcaactcgtgcgacaaaggtcacatttaac 22364950  T
Q  146 ctaa 149  Q
    ||||    
T  22364951 ctaa 22364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 37116543 - 37116641
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||| ||  |||||| | || |||||||| || |||||| |||||    
T  37116543 aggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccatgatcatctcacatcaactcgtacgacaaaggtcacatttatcctaa 37116641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 41598471 - 41598536
Alignment:
Q  145 cctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||| ||||||||| |  ||||||||| |||||||||| |||||||||||||||||    
T  41598471 cctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttc 41598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 17615229 - 17615268
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  17615229 tagctcgcgaggcgagagcctctactcgccacggcgagtt 17615268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22059198 - 22059159
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22059198 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22059159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 22145195 - 22145156
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  22145195 tagctcgcgaggcgagagcctctactcgccacggcgagtt 22145156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 22419223 - 22419184
Alignment:
Q  172 agctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  22419223 agctcgcgaggtgagggcctctactcgctatggcgagttc 22419184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 24707616 - 24707577
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  24707616 tagctcgcgaggcgagagcctctactcgccacggcgagtt 24707577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 37116663 - 37116701
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  37116663 gctcgcgaggcgagagcctctactcgctatggcgagttc 37116701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 20536522 - 20536559
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  20536522 ctcgcgaggcgagagcctctactcgccgtggcgagttc 20536559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 21918807 - 21918770
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  21918807 ctcgcgaggcgagagcctctgctcgccatggcgagttc 21918770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 23406695 - 23406732
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  23406695 ctcgcgaggcgagagcctctactcgccgtggcgagttc 23406732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 6608061 - 6608025
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  6608061 ctcgcgaggcgagaggctctactcgccatggcgagtt 6608025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 7300869 - 7300833
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  7300869 ctcgcgaggcgagaggctctactcgccatggcgagtt 7300833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 16861136 - 16861100
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||||| |||||| |||||||||||||||||||    
T  16861136 gctcgcgaggcgagagcatctactcgccatggcgagt 16861100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 21415033 - 21414997
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  21415033 ctcgcgaggcgagaggctctactcgccatggcgagtt 21414997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 24353210 - 24353316
Alignment:
Q  46 aatttaggcttactgaaacaataacagca---agataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcattt 142  Q
    |||| |||||||||||||||| |||| ||   ||||||  |||||||||||| | | ||| ||||||||  |||||| | ||||||||||| || |||||    
T  24353210 aattcaggcttactgaaacaacaacaacagtaagataagcaacttagtttcttatccccatgatcaactcacatcaactcgtgcgacaaaggtcacattt 24353309  T
Q  143 aacctaa 149  Q
    | |||||    
T  24353310 atcctaa 24353316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 45134712 - 45134676
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  45134712 ctcgcgaggcgagaggctctactcgccatggcgagtt 45134676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 6755 - 6965
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||| |||| | ||||||| |||||| |||||||||||||| ||||||| |||||| |||    
T  6755 atgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctc 6854  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||| ||||||  |||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||||||| |||||| ||| |||||||||||||    
T  6855 caagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgcc 6954  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  6955 atggcgagttc 6965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 14135 - 14345
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||| ||| |||| | ||||||| |||||| |||||||||||||| ||||||| |||||| |||    
T  14135 atgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattctaatctc 14234  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||| ||||||  |||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||||||| |||||| ||| |||||||||||||    
T  14235 caagttcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgcc 14334  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  14335 atggcgagttc 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 112; Significance: 8e-57; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 40152 - 39941
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| || |||| |||  |||| |||||||||||||||| |||| |||| |||| |||||||||||||||||    
T  40152 atgtatatacaattatataccattaacaacaacataagatcatattaattcaggcttactgaaacaacaacatcaaggtaaacaacttagtttctaacct 40053  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| | |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||    
T  40052 ctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgc 39953  T
Q  200 catggcgagttc 211  Q
    |||||| |||||    
T  39952 catggcaagttc 39941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 100517 - 100683
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||  ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||    
T  100517 atgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttactgaaacaacaacaacaagataaacaacttagtttctaacct 100616  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac 166  Q
    | |||| ||| |  |||||| | ||||||||||||||||||||||| || |||||||||| ||||||    
T  100617 ctaagagcaagtcacatcaactcgtgcgacaaagatcgcatttaacttagacaaggcattttgtaac 100683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 101619 - 101690
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaag 154  Q
    |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||| |||||||||||||||||    
T  101619 aacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttaacctaaacaag 101690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 111; Significance: 3e-56; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 6953 - 7163
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   ||||| ||||  | |||    | || ||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  6953 atgtatatacaattatataacattataaacaacattaattcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaacctc 7052  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| |||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||    
T  7053 taagatcaactcacatcaacttgtgcgacaagaatcgcatttaacctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgcc 7152  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  7153 atggcgagttc 7163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 8159 - 8368
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||| ||||||| |||||| ||||||||| || |||||    
T  8159 atgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaggataaacaacttagttccttacctc 8258  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | ||| |||||||||| ||||  |||| ||||| ||||||||||||| |  | ||||||||| ||| ||||| |||||||    
T  8259 taagatcaactcacatcaactcgtgagacaaagatcacattatacct-aacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgcc 8357  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  8358 atggcgagttc 8368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 15764 - 15599
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||  |||||| | |||||||||||||| ||||||||    
T  15764 aattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaatctccaagatcaactcacatcaactcgtgcgacaaagatcacatttaac 15665  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
     ||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  15664 ataaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttc 15599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 19652390 - 19652547
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  19652390 cttactggaacaataacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 19652489  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    || ||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19652490 ggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttc 19652547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 23019550 - 23019759
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||  |||| | ||||||||||| | || |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23019550 atgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctc 23019649  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | || |||||||||||||||||||||||| ||| ||||| ||||| | |  | |||||||||  || |||||||||||||    
T  23019650 caagatcaactcacatcaactcgttcgacaaagatcgcatttaacctaaccaa-gcattttgtaattggacaactcgcgaggcaagggcctctactcgcc 23019748  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  23019749 atggcgagttc 23019759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 27333236 - 27333053
Alignment:
Q  27 caacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgc 126  Q
    |||||| ||| |||||||||||| |||||||||||||||  |||| ||||||||| || ||||||||||||||| ||||||||||  |||||| | ||||    
T  27333236 caacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgc 27333137  T
Q  127 gacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| |||| |||||||||| ||||| ||||| ||||| | |  || |||||||| ||||||||||||||||||||||||||||    
T  27333136 gacaaggatcacatttaacct-aacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttc 27333053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 27393976 - 27393793
Alignment:
Q  27 caacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgc 126  Q
    |||||| ||| |||||||||||| |||||||||||||||  |||| ||||||||| || ||||||||||||||| ||||||||||  |||||| | ||||    
T  27393976 caacaacattggattatacaattcaggcttactgaaacagcaacatcaagataaacaatttagtttctaacctctaagatcaactcacatcaactcgtgc 27393877  T
Q  127 gacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| |||| |||||||||| ||||| ||||| ||||| | |  || |||||||| ||||||||||||||||||||||||||||    
T  27393876 gacaaggatcacatttaacct-aacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttc 27393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 19668516 - 19668725
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| | || || ||| |  | || ||||||||||||| |||||||||||||| |||||||||||| |||||    
T  19668516 atgtatatacaactatataacattatcaacaacactacatcatatacatcagacttactgaaacaacaacagcaagataaacaacttagtttcttacctc 19668615  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||||||||||| || |||||||||| |||||||  || ||||| | |  ||||||||||| ||||||||||||||||     
T  19668616 caagatcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgct 19668714  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  19668715 atggcgagttc 19668725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 22080717 - 22080506
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattata-caatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||| ||||||||||||  |||||  ||||| | ||| |||||||||||||||||||||| || ||||||||||  |||||||||||||||||    
T  22080717 atgtatatacatttatataacattaacaacatcattaggtcatatcaatttaggcttactgaaacaacaagagcaagataagcaacttagtttctaacct 22080618  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| | ||||||||| |||||||||   |||||||||||  || ||| |      ||||||||||| ||||||||||||||||    
T  22080617 ctaagatcaactcacatcaactcgtgcgacaaggatcgcattattcctaaacaaggtgttctgtcagacacaagctcgcgaggcgagagcctctactcgc 22080518  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  22080517 catggcgagttc 22080506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 1561498 - 1561609
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | ||||||||||||||| |||||||||||||||||| | ||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  1561498 cttactggaatattaacagcaagataaacaacttagtttctaacctctaggatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 1561597  T
Q  154 ggcattatgtaa 165  Q
    ||||||||||||    
T  1561598 ggcattatgtaa 1561609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 28496398 - 28496242
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  28496398 cttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaa 28496300  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  28496299 ggcattctgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 28496242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 29808809 - 29808653
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||| ||| ||||||||||  |||||| | ||||||||||||||||| |||||||||||||    
T  29808809 cttactggaacattaacagcaaggtaaacaacttagtttctaaactctaagatcaactcacatcaactcgtgcgacaaagatcgca-ttaacctaaacaa 29808711  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  29808710 ggcattctgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 29808653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 4668109 - 4667982
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    |||||||||  |||| || ||||||||||  || ||| | ||||||||| ||||||||||||||||  ||||||||| ||||| | | ||||||||||||    
T  4668109 aacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgagg 4668011  T
Q  183 tgagagcctctactcgccatggcgagttc 211  Q
     ||||||||||||||||||||||||||||    
T  4668010 cgagagcctctactcgccatggcgagttc 4667982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 9098457 - 9098293
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||||||| |||||||||| || ||||||||| ||||| ||||||||||  |||||| | ||||||||||| |  || | |||    
T  9098457 aattcaggcttactgaaacaataactgcaagataaacaaattagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtgacaataaac 9098358  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    || |||||||  || |||  ||  | |||||| |||| |||||||||||||||| |||||||||||    
T  9098357 ct-aacaaggtgttctgtctctcatgagctcgtgaggcgagagcctctactcgctatggcgagttc 9098293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 4674956 - 4674830
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    |||||||||  |||| || ||||||||||  || ||| | ||||||||| ||||||||||||||||  ||||||||| ||||| | | ||||||||||||    
T  4674956 aacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgagg 4674858  T
Q  183 tgagagcctctactcgccatggcgagtt 210  Q
     |||||||||||||||||||| ||||||    
T  4674857 cgagagcctctactcgccatgacgagtt 4674830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 4185719 - 4185592
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    |||||||||  |||| || ||||||||||  || ||| | ||||| ||| ||||||||||||||||  ||||||||| | ||| | | ||||||||||||    
T  4185719 aacttagttcttaacatctaagatcaactcacaacaactcgtgcggcaaggatcgcatttaacctag-caaggcattctataaatgggtagctcgcgagg 4185621  T
Q  183 tgagagcctctactcgccatggcgagttc 211  Q
     ||||||||||||||||||||||||||||    
T  4185620 cgagagcctctactcgccatggcgagttc 4185592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 4189221 - 4189307
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||||||||||||||  ||||||||| ||||| | | |||||||||||| |||||||||||||||||||| ||||||    
T  4189221 gtgcgacaacgatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtt 4189307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 21939648 - 21939736
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa--ctagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||| ||||||||||||||||| |||| |||||  |||||  |||||||||| |||||||||| |||||||||||||||||    
T  21939648 gtgcgacaaggatcacatttaacctaaacaagacattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 21939736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 35008344 - 35008502
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    |||||||||||||||||||||| |||||||  |||||||||||| ||| ||| ||||||||  |||||| | |||| |||||| || |||||| ||| ||    
T  35008344 aggcttactgaaacaataacagtaagataagcaacttagtttcttacccccatgatcaactcacatcaactcgtgcaacaaaggtcacatttatcct-aa 35008442  T
Q  151 caaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||| ||| | |||  |     ||||||||||| |||||||||||||||| |||||||||||    
T  35008443 caa-gcagtctgtctcacaacagctcgcgaggcgagagcctctactcgctatggcgagttc 35008502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 20109354 - 20109493
Alignment:
Q  70 cagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactag 169  Q
    |||||||||||| |||||||||||| ||||| ||||||||||  |||||| | ||||||||||| || ||  ||| || |||||||  || |||  ||      
T  20109354 cagcaagataaacaacttagtttcttacctctaagatcaactcacatcaactcgtgcgacaaaggtcaca-ataaacttaacaagg-gttctgtctctca 20109451  T
Q  170 ttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    | |||||| |||| |||||||||||||||| |||||||||||    
T  20109452 tgagctcgtgaggcgagagcctctactcgctatggcgagttc 20109493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 31155254 - 31155169
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    ||||||||| || |||||||||||||| ||||||||  |||||   | |||||||||||| |||||||||| |||||||||| ||||    
T  31155254 gtgcgacaaggaccgcatttaacctaa-caaggcatgttgtaaaggggtagctcgcgaggcgagagcctctgctcgccatggagagt 31155169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 12596269 - 12596308
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  12596269 tagctcgcgaggcgagagcctctactcgccacggcgagtt 12596308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 16102655 - 16102694
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16102655 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16102694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 16813088 - 16813127
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16813088 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16813127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 16830108 - 16830147
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  16830108 tagctcgcgaggcgagagcctctactcgccacggcgagtt 16830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 29493065 - 29493104
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  29493065 tagctcgcgaggcgagagcctctactcgccacggcgagtt 29493104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 15894238 - 15894200
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  15894238 gctcgcgaggtgagagactctgctcgccatggcgagttc 15894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 18821627 - 18821589
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  18821627 gctcgcgaggcgagagcctctgctcgccatggcgagttc 18821589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 23076926 - 23077024
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||||||||||| ||||| |||||||  || ||||||||| ||| ||| ||||||||  |||||| |  ||| |||||| || |||||| |||||    
T  23076926 aggcttactgaaacaacaacagtaagataagcaaattagtttcttacccccatgatcaactcacatcaactcatgcaacaaaggtcacatttatcctaa 23077024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 18457030 - 18457067
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  18457030 ctcgcgaggcgagagcctctactcgccatggctagttc 18457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 2287713 - 2287677
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  2287713 ctcgcgaggcgagagcctctactcgccacggcgagtt 2287677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 8523246 - 8523282
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  8523246 ctcgcgaggcgagaggctctactcgccatggcgagtt 8523282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 15539593 - 15539629
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  15539593 ctcgcgaggcgagagcctctactcgccacggcgagtt 15539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 15685907 - 15685871
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  15685907 ctcgcgaggcgagaggctctactcgccatggcgagtt 15685871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 17106045 - 17106085
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||  ||| ||||||||||||||||||||||||    
T  17106045 tagctcgcgagtcgagggcctctactcgccatggcgagttc 17106085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 25611533 - 25611493
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||| |||||||||| ||| |||||||||||||    
T  25611533 tagctcgcgaggcgagagcctctgctctccatggcgagttc 25611493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 130102 - 130258
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  130102 cttactggaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 130201  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  130202 ggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtt 130258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 60548 - 60482
Alignment:
Q  145 cctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| | ||| ||||||| |  | ||||||||| |||||||||||||||| |||||||||||    
T  60548 cctaaacaatgtattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttc 60482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 6678 - 6888
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  6678 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataac-aacttagtttttaacct 6776  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |  |||||||| ||| ||||| ||||||    
T  6777 ctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgc 6876  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  6877 catggcgagttc 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 8666 - 8770
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| | |||||||||||| |||||||||||| ||||| |||||||| |  |||||| | ||||||||||| || |||||||||| |||||    
T  8666 cttactggaacaacatcagcaagataaacaacttagtttcttacctctaagatcaattcacatcaactcgtgcgacaaaggtcacatttaacct-aacaa 8764  T
Q  154 ggcatt 159  Q
    ||||||    
T  8765 ggcatt 8770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 2623 - 2412
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| | |||||||||||| |||||| ||||||||||    
T  2623 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacatcagcaagataaacaacttaatttctaacct 2524  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||| |  ||||||||  |  ||||||||||||    
T  2523 ctaagatcaactcacatcaacttgtgcgacaaagatcgcatttatcctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgc 2424  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  2423 catggcgagttc 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 45716 - 45559
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||| ||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||||||||||||||| |||||||||    
T  45716 cttactggaacaattacagcaatataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttatcctaaacaa 45617  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    | |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45616 gacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttc 45559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 28406120 - 28406331
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| | ||||| |||  || ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  28406120 atgtatatacaattatataccattaacaacaacaatagatcatattaaattaggcttactaaaacaacaacagcaagataaacaacttagtttctaacct 28406219  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac-tagttagctcgcgaggtgagagcctctactcg 198  Q
    | ||||||||||  |||||| | ||||||||| ||||||||||||||||||||||||||||||||||  |  || || |||||| |||||||||||||||    
T  28406220 ctaagatcaactcacatcaactcgtgcgacaaggatcgcatttaacctaaacaaggcattatgtaacacaagta-cttgcgaggcgagagcctctactcg 28406318  T
Q  199 ccatggcgagttc 211  Q
    |||||||||||||    
T  28406319 ccatggcgagttc 28406331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 25175995 - 25176194
Alignment:
Q  3 gtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctcc 101  Q
    ||||||| ||||||||||||||  |||||| ||||||| |||  |||| |||||||||||||||| |||||||||||||| ||||||||||||||||||     
T  25175995 gtatatataattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacctct 25176094  T
Q  102 aagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcca 201  Q
    ||||||||||  |||||| | |||||||||||||          |||||||||||||| |||||||    || |||||||| ||| ||||||||||||||    
T  25176095 aagatcaacttacatcaattcgtgcgacaaagat----------ctaaacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgcca 25176184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 7709 - 7500
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||  |||||| |||| || ||| |||| |||||||||||||||| |||| || |||||| |||||||||||  |||||    
T  7709 atgtatatacaattatatcacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaacatgataaacaacttagtttcctacctc 7610  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||||||||||| || |||| ||||||| ||| | ||| |||  ||  | |||||| |||| ||||||||||||||||     
T  7609 caagatcaactcacatcaactcgtgcgacaaaggtcacattaaacctaaccaa-gtattctgtctctcatgagctcgtgaggcgagagcctctactcgct 7511  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  7510 atggcgagttc 7500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 22134141 - 22133984
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || ||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  22134141 cttactggaaaaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 22134042  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| | ||||||  |  ||  |||||||| |||||||||| |||||||||||||||||    
T  22134041 ggcagtctgtaacacaagta-ttcgcgaggcgagagcctctgctcgccatggcgagttc 22133984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 18786879 - 18786670
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  ||| || |||  || ||| ||||||||||||||||||||| ||||||| |||||| |||||||||||  |||||    
T  18786879 atgtatatacaactatataacattatcaataacattcaatcatataatttaggcttactgaaacaacaacagcatgataaacaacttagtttcctacctc 18786780  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | ||||||||||  || ||||  |||| ||||| |  || |||  ||  | ||||||||||| ||||||||||||||||     
T  18786779 caagatcaactcacatcaactcgtgcgacaaaagtcacattagacct-aacaaagtgttctgtctctcttgagctcgcgaggcgagagcctctactcgct 18786681  T
Q  201 atggcgagttc 211  Q
    ||||| |||||    
T  18786680 atggcaagttc 18786670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 23207426 - 23207631
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||  ||||| ||||| |||||||  |||||||||||| ||| |||||    
T  23207426 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttacttgaacaacaacagtaagataagcaacttagtttcttacccccaag 23207525  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatgg 204  Q
    |||||||  |||||| | ||||||||||| || |||||||||| |||||||  || ||||||| |  | ||||| ||| |||||||||||||||| ||||    
T  23207526 atcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatgg 23207624  T
Q  205 cgagttc 211  Q
    |||||||    
T  23207625 cgagttc 23207631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 23791423 - 23791628
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| |||| ||||||||| ||||||||||| |||| |||||    
T  23791423 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttccaacccccaag 23791522  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatgg 204  Q
    |||||||  |||||| | ||||||||||| || |||||||||| |||||||  || |||  |      |||||||||| |||||||||||||||| ||||    
T  23791523 atcaactcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgtctcacaagggctcgcgaggcgagagcctctactcgcgatgg 23791621  T
Q  205 cgagttc 211  Q
    |||||||    
T  23791622 cgagttc 23791628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 54 - 159
Target Start/End: Complemental strand, 22459485 - 22459381
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||  |||||| | ||  ||||||| || |||||||||| |||||    
T  22459485 cttactgaaacaataacagcaagataaacaacttagtttcttacctctaaggtcaactcacatcaactcgtaggacaaaggtcacatttaacct-aacaa 22459387  T
Q  154 ggcatt 159  Q
    ||||||    
T  22459386 ggcatt 22459381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 25109078 - 25109181
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| | | ||| ||||||||  |||||| | ||||||||||| || ||||||||    
T  25109078 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttatccccatgatcaacttacatcaactcgtgcgacaaaggtcacatttaac 25109177  T
Q  146 ctaa 149  Q
    ||||    
T  25109178 ctaa 25109181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 31756229 - 31756268
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31756229 tagctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 23708490 - 23708387
Alignment:
Q  106 tcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggc 205  Q
    ||||||| || ||| | |||||||||||||||||   | |||||||||| |||| ||||||| | || ||||| ||| |||||||||||||||| |||||    
T  23708490 tcaactatcaacaactcgtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggc 23708393  T
Q  206 gagttc 211  Q
    ||||||    
T  23708392 gagttc 23708387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 41684570 - 41684531
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  41684570 tagctcgcgaggcgagagcctctactcgccacggcgagtt 41684531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 44621239 - 44621278
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  44621239 tagctcgcgaggcgagagcctctactcgccacggcgagtt 44621278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 20520026 - 20519964
Alignment:
Q  145 cctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcga 207  Q
    ||||||||||| ||| |||||||||  | ||||||||| |||||||||||| ||| |||||||    
T  20520026 cctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcga 20519964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 23071769 - 23071731
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  23071769 gctcgcgaggcgagagcctctgctcgccatggcgagttc 23071731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 298621 - 298584
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  298621 ctcgcgaggcgagagcctctactcgccgtggcgagttc 298584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 23076756 - 23076793
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  23076756 ctcgcgaggcgagagcctctactcgccgtggcgagttc 23076793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 21238913 - 21238877
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  21238913 ctcgcgaggcgagaggctctactcgccatggcgagtt 21238877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 21241463 - 21241427
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  21241463 ctcgcgaggcgagaggctctactcgccatggcgagtt 21241427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 24505016 - 24505052
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  24505016 ctcgcgaggcgagaggctctactcgccatggcgagtt 24505052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 31503913 - 31503949
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  31503913 ctcgcgaggcgagaggctctactcgccatggcgagtt 31503949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 31506479 - 31506515
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  31506479 ctcgcgaggcgagaggctctactcgccatggcgagtt 31506515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 12910 - 13075
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   ||||| ||||||| ||| |||| |||||||||| ||||| ||||||||||||||  |||||||||||||||||    
T  12910 atgtatatacaattatataacattaataacaacattagatcatataattcaggcttactggaacaacaacagcaagataaaccacttagtttctaacctc 13009  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac 166  Q
     ||||||||||  |||||| | ||||||||||||| ||||||||||||||||||||||| ||||||    
T  13010 taagatcaactcacatcaactcgtgcgacaaagattgcatttaacctaaacaaggcattttgtaac 13075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 8050 - 7844
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| |||| || ||| |||| ||||||||||||||||   |||||||||||| |||||||||||| |||||    
T  8050 atgtatatacaactatataacattatcaacaacattaaatcatataattcaggcttactgaaacaa---cagcaagataaacaacttagtttcttacctc 7954  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | ||||||||||||||||||||| ||| ||||||||||| ||||||| |  | ||||||||| |||||||| |||||||     
T  7953 taagatcaactcacatcaactcgtgcgacaaagatcgcatttaccct-aacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgct 7855  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  7854 atggcgagttc 7844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 29204 - 29048
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  |||||||||||||||| |||||||| ||    
T  29204 cttactggaacattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactcgaacgacaaagatcgcattcaacctaaa-aa 29106  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||      |||| ||||| |||||||||| ||||||||||| |||||    
T  29105 ggcattctgtaacacaaacgctcacgaggcgagagcctctgctcgccatggctagttc 29048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 19407 - 19618
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  || | ||| |||||||||||| |||| ||||||||| |||||||||||||||||    
T  19407 atgtatatacaattatataccattaacaacaacattagatcatattaaatcagggttactgaaacaacaacatcaagataaacaacttagtttctaacct 19506  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    | ||||||||||  |||||| ||||||||||| ||||||||||||| ||| |||| |||| ||||||| | |   |||||||| |||||||||| |||||    
T  19507 ctaagatcaactcacatcaacttgtgcgacaaggatcgcatttaacataagcaagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgc 19606  T
Q  200 catggcgagttc 211  Q
    ||||||||||||    
T  19607 catggcgagttc 19618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 207
Target Start/End: Original strand, 160880 - 161033
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||| ||||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||| |||||| ||||| |||    
T  160880 cttaccgaaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttatcctaaccaa 160979  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcga 207  Q
    | |||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  160980 gacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcga 161033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 2196 - 2030
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||| ||| |||  || | |||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  2196 atgtatatacaattatataccattaacaacaacattggatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttattttctaacct 2097  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac 166  Q
    | ||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  2096 ctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaaggcattctgtaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 28735 - 28578
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||||||||||||    
T  28735 cttactggaacaatgacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcatttaacctaaacaa 28636  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||  |  || ||||||||| |||||||||| |||||||||||||||||    
T  28635 ggcattctgtaacacaagta-ctcgcgaggcgagagcctctgctcgccatggcgagttc 28578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 2731 - 2571
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||  |||||| | ||||||||| |||| |||||  ||||||    
T  2731 aggcttactgaaacaacaacagcaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaggatcacatttttcctaaa 2632  T
Q  151 caaggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||  |  || ||||||||| ||||||||||||||||||||||||||||    
T  2631 caaggcattctgtaacacaagta-ctcgcgaggcgagagcctctactcgccatggcgagttc 2571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 132848 - 133005
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||| ||||||||||||||||    
T  132848 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcacatttaacctaaacaa 132947  T
Q  154 ggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||  || |||   ||||||||| |||||||||| |||||||||||||||||    
T  132948 ggcattatgtaagacaagt--actcgcgaggcgagagcctctgctcgccatggcgagttc 133005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 62338 - 62496
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattata-caatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||||||||  |||||  ||||| | ||| ||||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  62338 atgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaacct 62437  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    | ||||||||||  |||| ||| | ||||||| ||||||| ||||| |||||||||||||    
T  62438 ctaagatcaactcacatcgaatcgggcgacaaggatcgca-ttaacataaacaaggcatt 62496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 14675 - 14508
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||| |||||||| ||||  ||| || ||||||| |||  || | |||||||||||||||| |||||||||||| | |||||||||||||||||    
T  14675 atgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttactgaaacaacaacagcaagatatacaacttagtttctaacct 14576  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaact 167  Q
    | ||||||||||  |||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  14575 ctaagatcaactcacatcaacttgtgcgaccaagatcgcatttatcctaaacaaggcattctgtaact 14508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 136345 - 136135
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagatt-atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||||| |||||||||||  |||||| |||| | | ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  136345 atgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacct 136246  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    ||||||||||||  |||||| | || |||||||| || |||||||||| |||||||  || | ||| | |  | ||||||||| ||||||||||||||||    
T  136245 ccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacct-aacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgc 136147  T
Q  200 catggcgagttc 211  Q
     |||||||||||    
T  136146 tatggcgagttc 136135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 145053 - 144843
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagatt-atacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    |||||||||||| |||||||||||  |||||| |||| | | ||| |||| |||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  145053 atgtatatacaactatataacattaacaacaacattaaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttcctacct 144954  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgc 199  Q
    ||||||||||||  |||||| | || |||||||| || |||||||||| |||||||  || | ||| | |  | ||||||||| ||||||||||||||||    
T  144953 ccaagatcaactcacatcaactcgtacgacaaaggtcacatttaacct-aacaaggtgttctataaatggacaactcgcgaggcgagagcctctactcgc 144855  T
Q  200 catggcgagttc 211  Q
     |||||||||||    
T  144854 tatggcgagttc 144843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 133779 - 133740
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  133779 tagctcgcgaggcgagagcctctactcgccacggcgagtt 133740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 103615 - 103406
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| || ||||||||  |||||| |||| || ||| |||| |||||||||||||||| ||||| |||||||| |||||||||||  |||||    
T  103615 atgtatatacaactacataacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaggaagataaagaacttagtttcctacctc 103516  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
    |||||||||||  |||||| | || |||||||| || |||||||||||| |||||  || ||||| | |  | |||| |||| ||||||||||||||||     
T  103515 caagatcaactcacatcaactcgtacgacaaaggtcacatttaacctaa-caaggtgttctgtaaatggacaactcgtgaggcgagagcctctactcgct 103417  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  103416 atggcgagttc 103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 10465 - 10309
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||| ||||||||||  |||||| | |||| |||||||||||||||||||| |||||    
T  10465 cttactggaacaacaacaacaagataaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcaacaaagatcgcatttaacct-aacaa 10367  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| ||||||||  |  | ||||||||| ||||||||||||||||  ||||||||||    
T  10366 ggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttc 10309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 5786 - 5952
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatac-aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacct 99  Q
    ||||||||||||||||||| ||||  |||||| ||||||| |||  |||| |||||||||||||||| |||| ||||||||| |||||||||| ||||||    
T  5786 atgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacaacaagataaa-aacttagtttttaacct 5884  T
Q  100 ccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaact 167  Q
    | ||||||||||  |||||| |||||||||||  ||| |||||| |||||| |||||||| |||||||    
T  5885 ctaagatcaactcacatcaacttgtgcgacaagaatcacatttagcctaaataaggcattctgtaact 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 32288 - 32435
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||||| ||||||||||||          ||||||||||||||||||||||||||||||    
T  32288 cttactggaacaacaacagtaagataaacaacttagtttctaacctctaagatcaactag----------tgcgacaaagatcgcatttaacctaaacaa 32377  T
Q  154 ggcattatgtaac-tagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||  |  || |||||||||||||||||||| |||||||||||||||||    
T  32378 ggcattatgtaacacaagta-ctcgcgaggtgagagcctctgctcgccatggcgagttc 32435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 7979 - 7826
Alignment:
Q  57 actgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggc 156  Q
    |||| ||||| | |||||||||||| |||||||||||  ||||| ||||||||||  |||||| |  |||||||||||||||||||||||| | ||||||    
T  7979 actggaacaacatcagcaagataaacaacttagtttcatacctctaagatcaactcacatcaattcttgcgacaaagatcgcatttaacct-agcaaggc 7881  T
Q  157 attatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||| || ||| || || ||||||||| |||||||||||||||| |||||||||||    
T  7880 attctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttc 7826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 12712 - 12921
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || |||||  |||| ||||||||||||| |||||||||||||| |||||||||| | |||||    
T  12712 atgtatatacaattatatcacattataaacaacatcaaataatacacattagacttactgaaacaacaacagcaagataaacaacttagtttattacctc 12811  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||| | | ||||||||||| || |||||||||| |||||||  || |||  ||  | ||||||||||| |||||||||||||| |     
T  12812 taagatcaactcacatccactcgtgcgacaaaggtcacatttaacct-aacaaggtgttctgtctctcatgagctcgcgaggcgagagcctctactccct 12910  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  12911 atggcgagttc 12921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 62 - 211
Target Start/End: Original strand, 334 - 482
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    ||||| |||||||||||||  |||| ||||||||||||| ||||||||||  |||||| | || |||||||||||||||||||| ||| |||| |||| |    
T  334 aacaacaacagcaagataac-aactcagtttctaacctctaagatcaactcacatcaactcgtacgacaaagatcgcatttaacataagcaagacattct 432  T
Q  162 gtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| | |  ||||||||| |||||||||| |||||||||||||||||    
T  433 gtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttc 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 1226 - 1391
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||| |||||||||||  |||||| || | || ||| |  | || ||||||| ||||| |||| ||||||||| |||||||||||| |||||    
T  1226 atgtatatacaactatataacattaacaacaacatcaaatcatatacatcagtcttactggaacaacaacaacaagataaaaaacttagtttcttacctc 1325  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaact 167  Q
     ||||||||||  |||||| | ||| ||||||||||||||||||||| ||||||||||| |||||||    
T  1326 taagatcaactcacatcaactcgtgtgacaaagatcgcatttaacct-aacaaggcattctgtaact 1391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 63; Significance: 1e-27; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 15802 - 16011
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    ||||||||||||||||||||||||   | ||| ||||  | |||  | | || ||||||| | || |||||||||| |||| ||||||||||||||||||    
T  15802 atgtatatacaattatataacattataagcaacattatttcataagaatcagtcttactggatcattaacagcaaggtaaacaacttagtttctaacctc 15901  T
Q  101 caagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgcc 200  Q
     ||||||||||  |||||| | |  ||||||||||||||||  ||||||| |||||||| ||||||     ||||||||||| |||||||||| ||||||    
T  15902 taagatcaactcacatcaactcgaacgacaaagatcgcattccacctaaa-aaggcattctgtaacacaaaagctcgcgaggcgagagcctctgctcgcc 16000  T
Q  201 atggcgagttc 211  Q
    |||||||||||    
T  16001 atggcgagttc 16011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 18196 - 18163
Alignment:
Q  126 cgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||| |||||||||||||||||||||||    
T  18196 cgacaaagattgcatttaacctaaacaaggcatt 18163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 3196 - 3284
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |  || ||||| ||| ||||||||||||||||||||||||    
T  3196 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttc 3284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 74 - 211
Target Start/End: Complemental strand, 2207 - 2070
Alignment:
Q  74 aagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaac-tagtta 172  Q
    |||||||| |||||||||||||||||| ||||| ||||  |||| | | ||||||||| ||||||||||||||||||||||||||| ||||||  |  ||    
T  2207 aagataaacaacttagtttctaacctctaagattaactcacatccactcgtgcgacaaggatcgcatttaacctaaacaaggcattctgtaacacaagta 2108  T
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
     ||||||||| |||||||||| || ||||||||||||||    
T  2107 -ctcgcgaggcgagagcctctgcttgccatggcgagttc 2070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 9301 - 9428
Alignment:
Q  83 aacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgagg 182  Q
    |||||||||  |||| || ||||||||||  || ||| | ||||||||| ||||||||||||||||  ||||||||| ||||| | | ||||||||||||    
T  9301 aacttagttcttaacatctaagatcaactcacaacaactcgtgcgacaaggatcgcatttaacctag-caaggcattctgtaaatgggtagctcgcgagg 9399  T
Q  183 tgagagcctctactcgccatggcgagttc 211  Q
     ||||||||||||||||||||||||||||    
T  9400 cgagagcctctactcgccatggcgagttc 9428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 293 - 381
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  293 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 8150 - 8062
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  8150 gtgcgacaaagatcgcatttaacctaaacaaggcattctgtaacactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 53525 - 53393
Alignment:
Q  1 atgtatatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctc 100  Q
    |||||||||||||||||| |||||   ||||| || | || ||| |  | || ||||||| ||||  ||||  |||||||| |||||||||||| |||||    
T  53525 atgtatatacaattatatcacattataaacaacatcaaatcataaacatcagtcttactggaacatcaacataaagataaacaacttagtttcttacctc 53426  T
Q  101 caagatcaactagcatcaaattgtgcgacaaag 133  Q
     ||||||||||  |||||| | |||||||||||    
T  53425 taagatcaactcacatcaactcgtgcgacaaag 53393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 154 - 359
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| ||||||||||||   ||||| || | || ||  ||||||||||||||||||||| ||||| ||||||   |||||||||||| ||| ||| |    
T  154 atatacatttatataacattattaacaacatcaaatcatttaatttaggcttactgaaacaacaacagtaagatatgcaacttagtttcttacccccatg 253  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatgg 204  Q
    |||||||  |||||| ||||||||||||| || |||||||||| ||||||| ||| |||  |      |||| ||||| |||||||||||||||| ||||    
T  254 atcaactcacatcaacttgtgcgacaaaggtcacatttaacct-aacaaggtattctgtctcacaagggctcacgaggcgagagcctctactcgctatgg 352  T
Q  205 cgagttc 211  Q
    |||||||    
T  353 cgagttc 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 34317 - 34473
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| || | |||||||||| |||| |||||||||||||||||| ||||||||||  |||||| | |  | |||||||||||||| |||||||| ||    
T  34317 cttactggaaaattaacagcaaggtaaacaacttagtttctaacctctaagatcaactcacatcaactagaacaacaaagatcgcattcaacctaaa-aa 34415  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    || ||||||||||     |  |||||||| |||||||||| |||||||||||||||||    
T  34416 ggaattatgtaacacaaaaaatcgcgaggcgagagcctctgctcgccatggcgagttc 34473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 2369 - 2213
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaa 153  Q
    ||||||| |||| ||| |||||| |||| |||||||||||||||||| ||||||||||  ||| || | |  || ||||||||||||| |||||||| ||    
T  2369 cttactggaacattaatagcaaggtaaaaaacttagtttctaacctctaagatcaactcacataaactcgaacggcaaagatcgcattcaacctaaa-aa 2271  T
Q  154 ggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  2270 ggcattctgtaacacacacgctcgcgaggcgagagcctctgctcgccatggcgagttc 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 207375 - 207287
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||| ||||| ||||  ||||||  |||||||||| |||||||||| |||||||||||||||||    
T  207375 gtgcgacaaagatcgcatttaacctaaacaaagcattgtgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttc 207287  T

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Target: scaffold0420 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 6255 - 6054
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| |||||  ||||||  |||||||||||| ||| ||| |    
T  6255 atatacatttatatcacattaataacaacatcaaatcatataattcaggcttactgaaacaacaacagtgagataagcaacttagtttcttacccccatg 6156  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcat--tatgtaactagttagctcgcgaggtgagagcctctactcgccat 202  Q
    |||| ||  |||||| | ||||||||||| || |||||||||| ||||||| ||  ||| | |||||   |||||||||||||||||||||||||||| |    
T  6155 atcatctcacatcaactcgtgcgacaaaggtcacatttaacct-aacaaggtattctatctcactag--ggctcgcgaggtgagagcctctactcgcctt 6059  T
Q  203 ggcga 207  Q
    |||||    
T  6058 ggcga 6054  T

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Target: scaffold0192 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 10178 - 10263
Alignment:
Q  126 cgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||||||||||||||||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  10178 cgacaaagatcgcatttaacctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttc 10263  T

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Target: scaffold0166 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 9690 - 9602
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgta--actagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||  |||||||||| |||||||||| ||||||||| |||||||    
T  9690 gtgcgacaaagatcacatttaacctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatgacgagttc 9602  T

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Target: scaffold0080 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 211
Target Start/End: Complemental strand, 19809 - 19652
Alignment:
Q  53 gcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaaca 152  Q
    |||||||| ||||| ||||| |||||||  |||||||||||| ||| ||||||||||||   |||||   ||||||||||| || |||||||||| ||||    
T  19809 gcttactggaacaacaacagtaagataagcaacttagtttcttacccccaagatcaactcatatcaacccgtgcgacaaaggtcacatttaacct-aaca 19711  T
Q  153 aggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||  || ||||||| |  | ||| ||||| |||||||||||||| | |||||||||||    
T  19710 aggtgttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttc 19652  T

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Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 40227 - 40264
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  40227 ctcgcgaggcgagagcctctactcgccgtggcgagttc 40264  T

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Target: scaffold0037 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 22598 - 22509
Alignment:
Q  54 cttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcattta 143  Q
    ||||||| ||||  |||| ||||| ||| |||||||||||||||||| ||||||||||  |||||| | |||||||||||||||||||||    
T  22598 cttactggaacagcaacatcaagacaaacaacttagtttctaacctctaagatcaactcacatcaactcgtgcgacaaagatcgcattta 22509  T

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Target: scaffold0037; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 80188 - 80100
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagt-tagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| || | | |||||||||| |||||||||| ||||||||| |||||||    
T  80188 gtgcgacgaagatcgcatttaacctaaacaaggcattctgtaa-tactattgctcgcgaggcgagagcctctgctcgccatgtcgagttc 80100  T

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Target: scaffold1403 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 209
Target Start/End: Original strand, 739 - 900
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| |||||  ||||||| |||||||||||| |||   | ||||||||  |||||| | ||||||||||| || ||||||||    
T  739 aattcaggcttactgaaacaacaacagttagataaacaacttagtttcttacc-atatgatcaactcacatcaactcgtgcgacaaaggtctcatttaac 837  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    || |||||||  || |||       |||||||||||||||| ||||||||||||||||||||||    
T  838 ct-aacaaggtgttctgtctaacactagctcgcgaggtgagggcctctactcgccatggcgagt 900  T

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Target: scaffold0737 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 1729 - 1565
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||| ||||| || || ||||||   |||||||||||| |||  |||||||||||  |||||| | ||||||||||| || ||| ||||    
T  1729 aattcaggcttactggaacaacaatagtaagataggcaacttagtttcttaccctcaagatcaactcacatcaactcgtgcgacaaaggtcacatgtaac 1630  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| |||||  || ||||| | |  | ||| ||||| |||||||||||||||| |||||||||||    
T  1629 ctaa-caaggtgttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttc 1565  T

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Target: scaffold0139 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 38507 - 38671
Alignment:
Q  46 aatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaac 145  Q
    |||| |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||  ||||||||  |||||| | |||||| |||| || ||||||||    
T  38507 aattcaggcttactgaaacaacaacagtaagataagcaacttagtttcttacccccgtgatcaactcacatcaactcgtgcgataaaggtctcatttaac 38606  T
Q  146 ctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |  ||||||| ||| |||  |      |||||||||| |||||||||||||||| |||||||||||    
T  38607 c-caacaaggtattctgtctcacaagggctcgcgaggcgagagcctctactcgctatggcgagttc 38671  T

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Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 11494 - 11598
Alignment:
Q  62 aacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaacaaggcattat 161  Q
    |||| ||||| |||| |||| |||||||||||||||||| ||||| ||||  |||||| | |  |||||||||||||||| |||||||| | |||||| |    
T  11494 aacattaacaccaaggtaaacaacttagtttctaacctctaagattaactcacatcaactcgaacgacaaagatcgcattcaacctaaaaagggcattct 11593  T
Q  162 gtaac 166  Q
    |||||    
T  11594 gtaac 11598  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 78470 - 78614
Alignment:
Q  5 atatacaattatataacattcgcaacaatattagattatacaatttaggcttactgaaacaataacagcaagataaataacttagtttctaacctccaag 104  Q
    ||||||| |||||| |||||   ||||| || | || ||| |||| |||||||||||||||| ||||| |||||||  ||||||||| || ||| ||| |    
T  78470 atatacatttatatcacattattaacaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagttgcttacccccatg 78569  T
Q  105 atcaactagcatcaaattgtgcgacaaagatcgcatttaacctaa 149  Q
    |||||||  |||||| |  |||||||||| || ||||||||||||    
T  78570 atcaactcacatcaactcatgcgacaaaggtcacatttaacctaa 78614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 128896 - 128738
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaacctaaa 150  Q
    |||||||||||||||| ||||| |||||||  |||||||||||| ||| ||| ||||||||   | ||  | |||||||||||||||||   ||||||||    
T  128896 aggcttactgaaacaacaacagtaagataagcaacttagtttcttacc-ccatgatcaactcataacatctcgtgcgacaaagatcgcaac-aacctaaa 128799  T
Q  151 caaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||| ||| |||        ||||||||||| |||||||||||||||| |||||||||||    
T  128798 caaggtattctgtcttacaggagctcgcgaggcgagagcctctactcgctatggcgagttc 128738  T

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Target: scaffold0503 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 12244 - 12281
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12244 ctcgcgaggtgagagcctctactcgccatggcgagttc 12281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 12664 - 12577
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaa--ctagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||  ||||||||||||||||||||| |||| |||||  |||||  ||| |||||| |||||||||| |||||||||||||||||    
T  12664 gtgcgacaagaatcgcatttaacctaaacaag-cattctgtaatactagt--gcttgcgaggcgagagcctctgctcgccatggcgagttc 12577  T

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Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 24502 - 24419
Alignment:
Q  128 acaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||| |||||||||||||||||||| | |||| ||||||      |||||||||| |||||||||| |||||||||||||||||    
T  24502 acaaggatcgcatttaacctaaacatgacattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttc 24419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 15956 - 15867
Alignment:
Q  121 ttgtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||   | ||||||||||||||| ||||||| |  | ||||||||| ||| |||| ||||||| |||||||||||    
T  15956 ttgtgcgacaaagatcgcaaa-atcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttc 15867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 97201 - 97297
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||||||||||||||| ||||| |||| ||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| ||||    
T  97201 aggcttactgaaacaacaacagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatccta 97297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 106479 - 106575
Alignment:
Q  51 aggcttactgaaacaataacagcaagataaataacttagtttctaacctccaagatcaactagcatcaaattgtgcgacaaagatcgcatttaaccta 148  Q
    |||||||||||||||| ||||| |||| ||  |||||||||||| ||| ||| ||||||||  |||||| | ||||||||||| || |||||| ||||    
T  106479 aggcttactgaaacaacaacagtaagaaaagcaacttagtttcttacc-ccatgatcaactcacatcaactcgtgcgacaaaggtcacatttatccta 106575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 97320 - 97358
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  97320 gctcgcgaggcgagagcctctactcgctatggcgagttc 97358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 106598 - 106636
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  106598 gctcgcgaggcgagagcctctactcgctatggcgagttc 106636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 8301 - 8265
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcga 207  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8301 tagctcgcgaggtgagagcctctactcgccacggcga 8265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 335 - 374
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  335 tagctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 10682 - 10643
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  10682 tagctcgcgaggcgagagcctctactcgccacggcgagtt 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 9485 - 9521
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  9485 ctcgcgaggcgagaggctctactcgccatggcgagtt 9521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 33458 - 33497
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  33458 tagctcgcgaggcgagagcctctactcgccacggcgagtt 33497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 81354 - 81315
Alignment:
Q  171 tagctcgcgaggtgagagcctctactcgccatggcgagtt 210  Q
    |||||||||||| |||||||||||||||||| ||||||||    
T  81354 tagctcgcgaggcgagagcctctactcgccacggcgagtt 81315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 26855 - 26889
Alignment:
Q  125 gcgacaaagatcgcatttaacctaaacaaggcatt 159  Q
    |||||||||||| ||||||||||||||||||||||    
T  26855 gcgacaaagatcacatttaacctaaacaaggcatt 26889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 211
Target Start/End: Complemental strand, 20228 - 20194
Alignment:
Q  177 gcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||| ||||||||||||||||||||||||||||    
T  20228 gcgaggcgagagcctctactcgccatggcgagttc 20194  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 59309 - 59271
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  59309 gctcgcgaggcgagagcctctgctcgccatggcgagttc 59271  T

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Target: scaffold0235 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 11320 - 11283
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  11320 ctcgcgaggtgagagcctcttctcgccttggcgagttc 11283  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 16406 - 16369
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  16406 ctcgcgaggcgagagcctctgctcgccatggcgagttc 16369  T

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Target: scaffold0142 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 17095 - 17132
Alignment:
Q  174 ctcgcgaggtgagagcctctactcgccatggcgagttc 211  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  17095 ctcgcgaggcgagagcctctgctcgccatggcgagttc 17132  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 43592 - 43555
Alignment:
Q  172 agctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  43592 agctcgcgaggcgagagcctctactcgtcatggcgagt 43555  T

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Target: scaffold0839 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 1932 - 1850
Alignment:
Q  123 gtgcgacaaagatcgcatttaacctaaacaaggcattatgtaactagttagctcgcgaggtgagagcctctactcgccatggcga 207  Q
    |||||||||||||||||   | |||||||||| |||| ||||||| | |  ||||||||| |||||||||| |||||||||||||    
T  1932 gtgcgacaaagatcgcaaa-atcctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcga 1850  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 2136 - 2172
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2136 gctcgcgaggcgagagcatctactcgccatggcgagt 2172  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 9818 - 9854
Alignment:
Q  173 gctcgcgaggtgagagcctctactcgccatggcgagt 209  Q
    |||||||||| |||||| |||||||||||||||||||    
T  9818 gctcgcgaggcgagagcatctactcgccatggcgagt 9854  T

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