View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3979_low_5 (Length: 465)

Name: NF3979_low_5
Description: NF3979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3979_low_5
NF3979_low_5
[»] chr4 (43 HSPs)
chr4 (163-360)||(53987316-53987513)
chr4 (16-162)||(34778338-34778484)
chr4 (36-162)||(12241440-12241566)
chr4 (16-162)||(19901930-19902076)
chr4 (16-162)||(5763174-5763320)
chr4 (16-162)||(18207052-18207198)
chr4 (16-162)||(56558196-56558342)
chr4 (16-162)||(23610559-23610705)
chr4 (16-162)||(39862434-39862580)
chr4 (16-143)||(3952182-3952309)
chr4 (16-164)||(33247142-33247288)
chr4 (57-162)||(12153088-12153193)
chr4 (16-155)||(38079732-38079871)
chr4 (16-151)||(33262564-33262699)
chr4 (16-163)||(5416478-5416626)
chr4 (20-162)||(47922091-47922233)
chr4 (67-162)||(52018700-52018795)
chr4 (16-155)||(24073541-24073679)
chr4 (90-162)||(17080726-17080798)
chr4 (362-453)||(3684733-3684824)
chr4 (94-151)||(12312593-12312650)
chr4 (16-121)||(30567859-30567964)
chr4 (16-154)||(56269088-56269217)
chr4 (16-154)||(37002263-37002391)
chr4 (361-420)||(2728256-2728315)
chr4 (24-82)||(12312496-12312554)
chr4 (33-135)||(31862249-31862351)
chr4 (100-160)||(25442271-25442331)
chr4 (16-82)||(5524444-5524510)
chr4 (16-76)||(36688200-36688260)
chr4 (16-75)||(13493276-13493335)
chr4 (100-159)||(16567388-16567447)
chr4 (390-453)||(33152512-33152575)
chr4 (100-146)||(26428576-26428622)
chr4 (16-82)||(42010114-42010180)
chr4 (16-82)||(48084537-48084603)
chr4 (16-82)||(56453832-56453898)
chr4 (16-81)||(1015866-1015931)
chr4 (90-155)||(33841890-33841955)
chr4 (37-74)||(40215478-40215515)
chr4 (15-76)||(52030705-52030766)
chr4 (16-76)||(1871280-1871340)
chr4 (103-155)||(32366466-32366518)
[»] chr1 (25 HSPs)
chr1 (18-164)||(12380924-12381070)
chr1 (18-164)||(12384991-12385137)
chr1 (18-162)||(12151684-12151828)
chr1 (16-162)||(50484303-50484449)
chr1 (16-162)||(23861964-23862114)
chr1 (16-152)||(50294075-50294211)
chr1 (90-162)||(45977939-45978011)
chr1 (56-162)||(7841762-7841868)
chr1 (16-167)||(40328188-40328340)
chr1 (359-453)||(9388559-9388653)
chr1 (16-167)||(48327166-48327317)
chr1 (359-453)||(10366564-10366658)
chr1 (16-82)||(24977237-24977303)
chr1 (16-82)||(30077656-30077722)
chr1 (57-155)||(2845189-2845288)
chr1 (90-160)||(1609624-1609694)
chr1 (16-82)||(39426207-39426273)
chr1 (16-76)||(32887792-32887852)
chr1 (16-82)||(52280051-52280117)
chr1 (95-160)||(30210801-30210866)
chr1 (115-162)||(35977883-35977930)
chr1 (94-136)||(40988658-40988700)
chr1 (95-163)||(680101-680169)
chr1 (90-154)||(6816294-6816358)
chr1 (16-76)||(24413294-24413354)
[»] chr5 (37 HSPs)
chr5 (16-163)||(4895747-4895894)
chr5 (16-163)||(35660621-35660768)
chr5 (16-163)||(37266647-37266794)
chr5 (16-162)||(32129629-32129775)
chr5 (16-162)||(11775709-11775856)
chr5 (16-162)||(40753174-40753320)
chr5 (16-163)||(13032035-13032181)
chr5 (18-163)||(14349720-14349864)
chr5 (18-155)||(18625435-18625572)
chr5 (21-161)||(4592719-4592858)
chr5 (20-155)||(39902339-39902474)
chr5 (52-162)||(1475686-1475796)
chr5 (16-163)||(8440983-8441130)
chr5 (16-162)||(34827111-34827255)
chr5 (360-453)||(15434412-15434505)
chr5 (20-160)||(3057170-3057310)
chr5 (359-453)||(900884-900978)
chr5 (360-420)||(30839719-30839779)
chr5 (90-135)||(43309062-43309107)
chr5 (36-82)||(28142807-28142853)
chr5 (16-82)||(36290599-36290665)
chr5 (100-160)||(10242752-10242811)
chr5 (16-72)||(27428893-27428949)
chr5 (16-160)||(3057335-3057479)
chr5 (16-75)||(31156551-31156609)
chr5 (96-155)||(38283828-38283887)
chr5 (361-443)||(2250327-2250409)
chr5 (100-160)||(10173867-10173927)
chr5 (16-82)||(2984402-2984468)
chr5 (94-136)||(23253736-23253778)
chr5 (91-129)||(30355218-30355256)
chr5 (16-82)||(41660103-41660169)
chr5 (412-453)||(30839962-30840003)
chr5 (95-148)||(43405567-43405620)
chr5 (100-155)||(14733489-14733545)
chr5 (36-76)||(32316531-32316571)
chr5 (20-129)||(32793324-32793433)
[»] chr8 (26 HSPs)
chr8 (16-162)||(30426681-30426827)
chr8 (16-162)||(10672524-10672670)
chr8 (16-162)||(36991273-36991419)
chr8 (18-155)||(28069643-28069780)
chr8 (16-156)||(24101939-24102079)
chr8 (24-162)||(41511179-41511317)
chr8 (16-161)||(40695259-40695404)
chr8 (36-163)||(28318934-28319061)
chr8 (94-162)||(5033023-5033091)
chr8 (26-160)||(27490028-27490162)
chr8 (16-162)||(10652629-10652776)
chr8 (25-162)||(44859188-44859324)
chr8 (58-162)||(12177618-12177722)
chr8 (58-162)||(12422046-12422150)
chr8 (365-444)||(37819877-37819956)
chr8 (16-154)||(45113195-45113334)
chr8 (20-160)||(37966459-37966598)
chr8 (16-82)||(26749560-26749626)
chr8 (16-81)||(34612562-34612627)
chr8 (95-160)||(39143443-39143508)
chr8 (41-154)||(8412179-8412292)
chr8 (16-55)||(5033108-5033147)
chr8 (95-154)||(28584581-28584639)
chr8 (16-82)||(42761710-42761776)
chr8 (95-132)||(21492730-21492767)
chr8 (94-162)||(28403232-28403300)
[»] chr2 (23 HSPs)
chr2 (16-162)||(35316742-35316888)
chr2 (16-155)||(28564815-28564955)
chr2 (16-155)||(13238605-13238744)
chr2 (16-162)||(23259499-23259645)
chr2 (57-155)||(39465699-39465797)
chr2 (94-162)||(10877619-10877686)
chr2 (65-162)||(41983401-41983497)
chr2 (57-141)||(45625115-45625199)
chr2 (360-443)||(33538175-33538258)
chr2 (65-151)||(374499-374585)
chr2 (16-136)||(374946-375056)
chr2 (90-160)||(2061296-2061366)
chr2 (16-154)||(8988791-8988918)
chr2 (16-82)||(4446908-4446974)
chr2 (90-160)||(12949389-12949459)
chr2 (16-82)||(23459858-23459924)
chr2 (97-151)||(42075456-42075510)
chr2 (95-154)||(3354844-3354903)
chr2 (24-71)||(28029834-28029881)
chr2 (95-154)||(29188588-29188647)
chr2 (125-162)||(673185-673222)
chr2 (91-135)||(30824122-30824166)
chr2 (91-135)||(41073026-41073070)
[»] chr3 (25 HSPs)
chr3 (16-163)||(43719959-43720106)
chr3 (16-163)||(2229899-2230046)
chr3 (16-146)||(34373597-34373727)
chr3 (16-160)||(34373750-34373894)
chr3 (16-139)||(27033591-27033714)
chr3 (16-162)||(40851690-40851837)
chr3 (15-162)||(19830442-19830591)
chr3 (16-146)||(46167326-46167456)
chr3 (22-160)||(550834-550972)
chr3 (24-162)||(12402883-12403021)
chr3 (16-154)||(48084744-48084883)
chr3 (360-452)||(2043731-2043823)
chr3 (361-453)||(26847736-26847828)
chr3 (16-154)||(31523680-31523808)
chr3 (16-154)||(42613015-42613143)
chr3 (91-151)||(52859468-52859528)
chr3 (16-76)||(33979937-33979997)
chr3 (95-155)||(49289042-49289102)
chr3 (360-427)||(40034727-40034794)
chr3 (16-82)||(49679282-49679348)
chr3 (24-152)||(566794-566925)
chr3 (90-135)||(32577476-32577520)
chr3 (95-155)||(3009173-3009233)
chr3 (121-159)||(25506612-25506650)
chr3 (94-155)||(20485808-20485869)
[»] chr7 (32 HSPs)
chr7 (16-162)||(21151069-21151215)
chr7 (16-168)||(25084740-25084892)
chr7 (16-159)||(16366438-16366581)
chr7 (15-155)||(18198180-18198320)
chr7 (16-155)||(4888391-4888530)
chr7 (16-162)||(45260439-45260586)
chr7 (16-146)||(7362501-7362631)
chr7 (16-162)||(12139245-12139390)
chr7 (16-151)||(9559066-9559201)
chr7 (16-162)||(44647882-44648027)
chr7 (20-160)||(47226092-47226229)
chr7 (360-453)||(38174620-38174713)
chr7 (16-155)||(32915883-32916019)
chr7 (16-160)||(29630967-29631111)
chr7 (16-154)||(33450431-33450570)
chr7 (16-154)||(47500294-47500433)
chr7 (360-436)||(45849505-45849581)
chr7 (16-82)||(47799912-47799978)
chr7 (16-154)||(34985957-34986095)
chr7 (361-428)||(6494744-6494811)
chr7 (16-82)||(30588532-30588598)
chr7 (102-160)||(47271205-47271263)
chr7 (95-160)||(6882149-6882214)
chr7 (16-136)||(19889046-19889156)
chr7 (16-82)||(39855825-39855891)
chr7 (95-160)||(32916098-32916163)
chr7 (16-76)||(989132-989192)
chr7 (16-71)||(19027695-19027751)
chr7 (16-71)||(20726885-20726941)
chr7 (95-135)||(30588489-30588529)
chr7 (104-160)||(33608977-33609033)
chr7 (16-76)||(46802343-46802403)
[»] chr6 (28 HSPs)
chr6 (16-162)||(4804365-4804511)
chr6 (22-162)||(29698080-29698220)
chr6 (22-162)||(1249164-1249304)
chr6 (16-162)||(7162001-7162147)
chr6 (15-162)||(21159380-21159523)
chr6 (16-139)||(17944102-17944225)
chr6 (16-155)||(27826462-27826601)
chr6 (60-167)||(32737786-32737893)
chr6 (16-134)||(12412582-12412700)
chr6 (16-154)||(227575-227714)
chr6 (16-166)||(13089761-13089903)
chr6 (360-453)||(29396444-29396537)
chr6 (383-453)||(22957002-22957072)
chr6 (383-453)||(23831320-23831390)
chr6 (365-444)||(21203302-21203381)
chr6 (40-136)||(30460763-30460859)
chr6 (16-82)||(24484876-24484942)
chr6 (361-442)||(18141383-18141464)
chr6 (371-453)||(22995985-22996065)
chr6 (371-453)||(23792335-23792415)
chr6 (16-75)||(7215864-7215923)
chr6 (16-82)||(32254043-32254109)
chr6 (90-134)||(17398780-17398824)
chr6 (95-146)||(28696731-28696782)
chr6 (38-76)||(2720376-2720414)
chr6 (361-442)||(9961216-9961297)
chr6 (94-155)||(31708283-31708344)
chr6 (23-71)||(7545645-7545693)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-162)||(207980-208122)
[»] scaffold0035 (1 HSPs)
scaffold0035 (16-162)||(16409-16555)
[»] scaffold0250 (1 HSPs)
scaffold0250 (16-162)||(7064-7210)
[»] scaffold0126 (1 HSPs)
scaffold0126 (16-155)||(22454-22593)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-162)||(73901-73998)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-162)||(6449-6585)
[»] scaffold0456 (1 HSPs)
scaffold0456 (57-134)||(13641-13718)
[»] scaffold0008 (1 HSPs)
scaffold0008 (16-155)||(9213-9349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (16-82)||(17318-17384)
[»] scaffold0468 (1 HSPs)
scaffold0468 (102-158)||(5531-5587)


Alignment Details
Target: chr4 (Bit Score: 178; Significance: 8e-96; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 163 - 360
Target Start/End: Original strand, 53987316 - 53987513
Alignment:
Q  163 gaaatagagatagaaacatgcgaggtcttatctgcaattgcaacatgataagaaaatcatgtcccgtacatgcatggtattagagtgagtttgaaaaagc 262  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  53987316 gaaatagagatagaaacatgcgaggtcttatctacaattgcaacatgataagaaaatcatgtcccgtacatgcatggtattagagtgagtttgaaaaagt 53987415  T
Q  263 catgcattattgcctcgacaactatgattttgtggtatagtcaatgtaattccaaacatgtacttatataagaaagtacatgcttgcttaaaaaataa 360  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  53987416 catgcattattgcctctacaactatgattttgtggtatagtcaatgtaattccaaacatgtacttatataagaaggtaaatgcttgcttaaaaaataa 53987513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 34778484 - 34778338
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  34778484 atagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 34778385  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    || |||||||||||||||||||||||||||| ||||||| |||||||    
T  34778384 cacattgaagaaatggagaaacacataaatggagaggattctaaccc 34778338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 12241440 - 12241566
Alignment:
Q  36 gtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  12241440 gtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaa 12241539  T
Q  136 acacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||||||    
T  12241540 acacataaatgaagaggatcctaaccc 12241566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 19901930 - 19902076
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  19901930 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 19902029  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||    
T  19902030 caaattgaagaaatagagaaacacataaatggagaggatcttaaccc 19902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 5763174 - 5763320
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  5763174 atagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 5763273  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  5763274 caaattgaagaaatggagaaacatataaatggagatgatcctaaccc 5763320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 18207052 - 18207198
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| |||||||| ||||||| ||||||||||||||| ||||||  ||||||||||||||||||       ||||||||||||||||||||||| ||    
T  18207052 atagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattatattttacctttttcaagattttatgtgtctttatctttc 18207151  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  18207152 caaattgaagaaattgagaaacacataaatggagaggatcctaaccc 18207198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 56558342 - 56558196
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||| ||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  56558342 atagacacaaaaaatagatggtgggtcctatcactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 56558243  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  56558242 caaattgaagaaatagagaaacatataaatggagaggatcctaaccc 56558196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 23610705 - 23610559
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| || |||||||||||| ||||||| |||||||| |||||||||       ||||||||||||| ||||||||||||    
T  23610705 atagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaaatatattttacttttttcaagattttatgtatctttatctctc 23610606  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  23610605 caaattgaagaaatggagaaacatataaatggagaggatcttaaccc 23610559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 39862580 - 39862434
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||  ||||| |||||| ||||| |||| ||||||||||||||||||        |||||||||||||||||||||||||    
T  39862580 atagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccatcattaattatattttactttttttaagattttatgtgtctttatctctc 39862481  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||    
T  39862480 caaattgaagaaaatgagaaacacataaatgaagaggatcctaaccc 39862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 3952182 - 3952309
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| |||||||| ||||||| ||||||||||||||| ||| ||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  3952182 atagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 3952281  T
Q  116 caaattgaagaaatggagaaacacataa 143  Q
    ||||||||||||||||||||||||||||    
T  3952282 caaattgaagaaatggagaaacacataa 3952309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 33247142 - 33247288
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| | |||||||||| || || |||| ||||||||||||||||||       |  |||||||||||||||||||||||    
T  33247142 atagacacaagaaatagatggtgggttctaccactaaatgggttccaccatcattaattatattttatttttttc--gattttatgtgtctttatctctc 33247239  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccga 164  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33247240 caaattgaagaaatggagaaacacataaatggagaggatcctaacccga 33247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 12153193 - 12153088
Alignment:
Q  57 gtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcc 156  Q
    ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12153193 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcc 12153094  T
Q  157 taaccc 162  Q
    ||||||    
T  12153093 taaccc 12153088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 38079732 - 38079871
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| |||||| ||||||||  | |||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  38079732 atagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 38079831  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||| |||||||||||| |||||||| ||||||||    
T  38079832 caaattgaaaaaatggagaaacgcataaatggagaggatc 38079871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 33262564 - 33262699
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| |||||||||||||||||||| |  ||||||| ||||||||||||||||||        || ||||||||||||||||||||||    
T  33262564 atagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattatattttactttttttaaaattttatgtgtctttatctctc 33262663  T
Q  116 caaattgaagaaatggagaaacacataaatgaagag 151  Q
    |||||||||||||| || ||| ||||||||| ||||    
T  33262664 caaattgaagaaatagaaaaatacataaatggagag 33262699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 5416478 - 5416626
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnnc--aagattttatgtgtctttatctc 113  Q
    ||||||||||||| || || |||| ||||||||||||||| ||||||| ||||||||||||||||||          ||||||||||||||||||||||     
T  5416478 atagacacaaaaa-tagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttttaaagattttatgtgtctttatctg 5416576  T
Q  114 tccaaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  5416577 tccaaattgaagaaatggagaaacacataaattgagaggattctaacccg 5416626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 47922091 - 47922233
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||||||||| || |||| || |||||||||||| || |||| |||||||| |||||||||       ||| |||||| ||||||||||||||| |||    
T  47922091 acacaaaaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatatattttatttttttcaatattttacgtgtctttatctctctaaa 47922190  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  47922191 ttgaagaaatggagaaacacataaattgagaggatcctaaccc 47922233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 52018795 - 52018700
Alignment:
Q  67 cattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  52018795 cattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 52018700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 24073679 - 24073541
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| ||||||||||||||| ||||| | |||||||||||||| ||        |||||||||||||| ||| |||||||    
T  24073679 atagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaattatatatt-tttttttcaagattttatgtgccttcatctctc 24073581  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||| |||||||| |||||||||||||||| ||||||||    
T  24073580 caaatggaagaaattgagaaacacataaatggagaggatc 24073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 17080726 - 17080798
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  17080726 caagattttatctgtctttatctctccaaattgaagaaatggagaaacacataaatggaggggatcctaaccc 17080798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 3684733 - 3684824
Alignment:
Q  362 aggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||| | |||||||||| ||||||||| |||||||||  || |||||||||||||||||||||||| |||||||||||| | ||||||||    
T  3684733 aggaataatatgtgaacaactaaattgtaaaaccaacaatatatttgctatttttaataatattttgtctgatttcgatttttgtgctcctc 3684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 12312593 - 12312650
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagag 151  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  12312593 attttatgtgtctttatctctctaaattgaagaaatggagaaacacataaatggagag 12312650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 30567964 - 30567859
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| || |||  ||||||||||||||||||       ||| ||||||||||||||||||| ||    
T  30567964 atagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattatattttacttttttcaaaattttatgtgtctttatctatc 30567865  T
Q  116 caaatt 121  Q
     |||||    
T  30567864 aaaatt 30567859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 56269088 - 56269217
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||| ||||          |  |||||||||||||||||||||    
T  56269088 atagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt---------tactttttatgtgtctttatctctc 56269178  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggat 154  Q
     |||| ||| |||||||||||   ||||||| |||||||    
T  56269179 taaatggaacaaatggagaaatttataaatggagaggat 56269217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 37002263 - 37002391
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||| ||||||||||||  |||||||| ||||||| |||||||||||| |||||            |||||||||||||||||||||    
T  37002263 atagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttact----------ttttatgtgtctttatctctc 37002352  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggat 154  Q
     |||| ||| |||||||||||   ||||||| |||||||    
T  37002353 taaatggaacaaatggagaaatttataaatggagaggat 37002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 361 - 420
Target Start/End: Original strand, 2728256 - 2728315
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaata 420  Q
    ||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||    
T  2728256 gaggaatgatatgtgaacaactaaattatacaaccaacaacttacttgctatttttaata 2728315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 12312496 - 12312554
Alignment:
Q  24 aaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    |||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  12312496 aaaaaatagatggtggatcctaccactaagtgggtcccatcatcattaattatatttta 12312554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 31862249 - 31862351
Alignment:
Q  33 atggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatgga 132  Q
    ||||||||||||||||||||||| ||||||| |||||||||||| |||||        || ||||| ||||||| ||||||||||||| | |||||| ||    
T  31862249 atggtggatcctaccactaagtgggtcccaccatcattaattattttttactttttctaaaattttgtgtgtctatatctctccaaatggtagaaataga 31862348  T
Q  133 gaa 135  Q
    |||    
T  31862349 gaa 31862351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 25442271 - 25442331
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||||||||||||||| ||||||||||||||   |||||||| |||||||| ||||    
T  25442271 tgtgtctttatctctccaaatggaagaaatggagaaggccataaatggagaggatcttaac 25442331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 5524510 - 5524444
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||| ||||||||| |||||| ||||| || |||||| ||||||| |||||||||||| |||||    
T  5524510 atagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattatttttta 5524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 36688200 - 36688260
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    ||||||||||||||||| || ||  ||||| ||||||||| ||||||| ||||||||||||    
T  36688200 atagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattat 36688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 13493335 - 13493276
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaatta 75  Q
    ||||||||  |||||| || |||||||| |||||||||||||||||  ||||||||||||    
T  13493335 atagacacgtaaaatagatagtggatcccaccactaagtgagtccctttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 16567388 - 16567447
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaa 159  Q
    ||||||||||||| | |||||||||||||| |||| | ||||||||| ||||||| ||||    
T  16567388 tgtgtctttatcttttcaaattgaagaaattgagagaaacataaatgtagaggattctaa 16567447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 453
Target Start/End: Complemental strand, 33152575 - 33152512
Alignment:
Q  390 acaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||| ||| |||||||||||||| ||||||||  |||||| ||||||  ||||||||    
T  33152575 acaaccaacaacttatttgctatttttaatgatattttgcatgattttgatttccgtgctcctc 33152512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 26428622 - 26428576
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatg 146  Q
    ||||||| ||||||||||||||| ||||||||||||  |||||||||    
T  26428622 tgtgtctatatctctccaaattgtagaaatggagaaggacataaatg 26428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 42010180 - 42010114
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||| ||||||||||| ||| || ||||| |||||| || ||||||| |||||||||||| |||||    
T  42010180 atagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 42010114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 48084537 - 48084603
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||| |||| |||| |||||| | ||| ||||||||| ||||||| |||||||||||| |||||    
T  48084537 atagacataaaacataagtggtgggttctagcactaagtgggtcccaccatcattaattatttttta 48084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 56453832 - 56453898
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||  |||||| ||||| || |||||| ||||||| |||||| ||||| |||||    
T  56453832 atagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattatttttta 56453898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 1015866 - 1015931
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttt 81  Q
    ||||||||||||||||| |||||| ||| | || || ||| ||||||| |||||||||||| ||||    
T  1015866 atagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 33841890 - 33841955
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||| ||||||||||||| ||||||| || |||||||||| |    |||||||||||||||    
T  33841890 caagattttttgtgtctttatctttccaaatggaggaaatggagagaattgtaaatgaagaggatc 33841955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 40215478 - 40215515
Alignment:
Q  37 tggatcctaccactaagtgagtcccactatcattaatt 74  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  40215478 tggatcctaccacttagtgagtcccaccatcattaatt 40215515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 52030705 - 52030766
Alignment:
Q  15 aatagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    |||| |||||||| || ||| ||||||||||| | |||||| ||||||| ||||||||||||    
T  52030705 aatacacacaaaatatgaattgtggatcctacaaataagtgggtcccaccatcattaattat 52030766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1871340 - 1871280
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    ||||||| |||| ||| || ||||||||||| |||||||| ||||||  ||||||||||||    
T  1871340 atagacaaaaaatatagatagtggatcctactactaagtgggtcccatcatcattaattat 1871280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 32366466 - 32366518
Alignment:
Q  103 gtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||||| |||||| |||| ||||||||||||||  ||| ||||||||||||||    
T  32366466 gtctttgtctctctaaatagaagaaatggagaacaacacaaatgaagaggatc 32366518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 7e-53; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 12380924 - 12381070
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12381023  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatcctaacccga 164  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12381024 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 12381070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 12384991 - 12385137
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12385090  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatcctaacccga 164  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12385091 aattgaagaaatggagaaacacataaatggagaggatcctaacccga 12385137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 12151828 - 12151684
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| || |||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  12151828 agacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctcca 12151729  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||    
T  12151728 aattgaataaatggagaaacacataaatggggaggatcttaaccc 12151684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 50484449 - 50484303
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| | | ||||||||||| |||||||  |||||||||||||||||       ||||||||||||||||||||||||||    
T  50484449 atagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgtcattaattatattttacttttttcaagattttatgtgtctttatctctc 50484350  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||    
T  50484349 caaattaaagaaatggagaaacacataaatggagaggatcttaaccc 50484303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 23861964 - 23862114
Alignment:
Q  16 atagacacaaaaaataaatggtgg---atcctaccactaagtgagtcccactatcattaattatattttannnnnnn-caagattttatgtgtctttatc 111  Q
    |||||||||||||||| |||||||   ||||||||||||||||  |||||| ||||||||||||||||||        ||||||||||||||||||||||    
T  23861964 atagacacaaaaaatagatggtggtgaatcctaccactaagtggatcccaccatcattaattatattttattttttttcaagattttatgtgtctttatc 23862063  T
Q  112 tctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    | |||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  23862064 tttccaaattgaagaaatagagaaacacatgaatgaagaggattctaaccc 23862114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 50294075 - 50294211
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| |||||||||||||||  ||| || ||||||||||||||||||       ||||||||||||||||||||||||||    
T  50294075 atagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccatcattaattatattttatttttttcaagattttatgtgtctttatctctc 50294174  T
Q  116 caaattgaagaaatggagaaacacataaatgaagagg 152  Q
    ||||| |||||||| ||||||||| |||||| |||||    
T  50294175 caaatggaagaaattgagaaacacgtaaatggagagg 50294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 45978011 - 45977939
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45978011 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 45977939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 162
Target Start/End: Original strand, 7841762 - 7841868
Alignment:
Q  56 agtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |||    
T  7841762 agtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaaaaacatataaatggagagaatc 7841861  T
Q  156 ctaaccc 162  Q
    |||||||    
T  7841862 ctaaccc 7841868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 40328340 - 40328188
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnn-caagattttatgtgtcttt-atctc 113  Q
    ||||||||||||| || ||||||| ||| ||||||||||| || |||| ||||||| ||||||||||        ||||||||||||||||||| |||||    
T  40328340 atagacacaaaaa-tagatggtgggtcccaccactaagtgggttccaccatcattagttatattttactttttttcaagattttatgtgtcttttatctc 40328242  T
Q  114 tccaaattgaagaaatggagaaacacataaatgaagaggatcctaacccgaaat 167  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||| ||||    
T  40328241 tccaaattaaagaaatgaagaaacacataaatgaagaggatcttaacccaaaat 40328188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 9388559 - 9388653
Alignment:
Q  359 aagaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||||| |||||||||||| | ||||||||    
T  9388559 aagaggaatgatatgtgaacaattaaattgtacaaccaacaacttatttactatttttaatgatattttgtctgatttcgatttatgtgctcctc 9388653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 48327166 - 48327317
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnn-caagattttatgtgtctttatctct 114  Q
    ||||||| |||||||| ||||||  ||||||||||||||| |||| || ||||||||||||||||||        |||||||||||||  |||||| |||    
T  48327166 atagacaaaaaaaatagatggtgagtcctaccactaagtgggtcc-accatcattaattatattttattttttttcaagattttatgtacctttatatct 48327264  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaacccgaaat 167  Q
    |||||| |||||||| || ||||||||||||| |||||||| |||||| ||||    
T  48327265 ccaaatggaagaaattgataaacacataaatggagaggatcttaaccccaaat 48327317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 10366564 - 10366658
Alignment:
Q  359 aagaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||| | ||||||||| |||||||||||||||||| ||| ||| |||||||||| ||||||| |||||||||||||| | ||||||||    
T  10366564 aagaggaatgatacgtgaacaatcaaattgtacaaccaacaacttatttgttatttttaatgatattttatttgatttcgatttatgtgctcctc 10366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 24977303 - 24977237
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||| ||||||| ||||||||||    
T  24977303 atagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatatttta 24977237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 30077656 - 30077722
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||||| |||||    
T  30077656 atagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattatttttta 30077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 2845288 - 2845189
Alignment:
Q  57 gtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattga-agaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||| ||||||||||||||||||       ||| ||||| ||||| |||||||||||||||||| |||||| |||||| ||||||||| ||||||||    
T  2845288 gtcccaccatcattaattatattttactattttcaaaattttgtgtgtatttatctctccaaattgatagaaatagagaaaaacataaatggagaggatc 2845189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 1609624 - 1609694
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||||||||||||| ||||| ||||  |||||||||  ||| |||||||||||||||||| ||||    
T  1609624 caagattttatgtgtctttacctctctaaatgaaagaaatgggaaaagacataaatgaagaggatcttaac 1609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 39426273 - 39426207
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||| |||||| || |||| |||||||||||| || |||||||||||||||||||| |||||    
T  39426273 atagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaattatttttta 39426207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 32887792 - 32887852
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    ||||||||| ||||||||| ||||||||||||| ||| || ||||||| ||||||||||||    
T  32887792 atagacacataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattat 32887852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 52280051 - 52280117
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||| ||||||||| |||||| ||||| |||||||||  |||||| |||||||||||| |||||    
T  52280051 atagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattatttttta 52280117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 30210801 - 30210866
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||| |||||||||||||||| |||| ||| |||||||| |  ||||||||| |||||||||||||    
T  30210801 ttttttgtgtctttatctctctaaatagaataaatggaggacaacataaatggagaggatcctaac 30210866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 35977930 - 35977883
Alignment:
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||| |||||||| | ||||||||||||| |||||||||||||||    
T  35977930 ccaaattaaagaaatgaataaacacataaatggagaggatcctaaccc 35977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 40988700 - 40988658
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaa 136  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||    
T  40988700 attttgtgtgtctttatctctccaaatagaaaaaatggagaaa 40988658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 680101 - 680169
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    |||| ||||||||||||||||||||| ||  |||| || |||   ||||||| ||||||||||||||||    
T  680101 ttttgtgtgtctttatctctccaaatagagtaaattgataaagttataaatggagaggatcctaacccg 680169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 6816358 - 6816294
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||||| |||||| ||||| ||  |||||  ||||||| |||||| |||||||||||||||||    
T  6816358 caagatttcatgtgtttttatatcctcaaataaaagaaattgagaaagacataaatgaagaggat 6816294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 24413294 - 24413354
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    |||||||||||||||  ||||||| ||||| || ||| || ||||||| ||||||||||||    
T  24413294 atagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattat 24413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 4895747 - 4895894
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  4895747 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 4895846  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4895847 caaattgaagaaatggagaaacatataaatgaagaggatcctaacccg 4895894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 35660621 - 35660768
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  35660621 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 35660720  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||||||    
T  35660721 caaattgaagaaacggagaaacacataaatagagaggatcttaacccg 35660768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 37266794 - 37266647
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| || |||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  37266794 atagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaattatattttagttttttcaagattttatgtgtctttatctctc 37266695  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  37266694 caaattgaagaaatggaaaaacacgtaaatggagaggatcctaacccg 37266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 32129629 - 32129775
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||| ||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  32129629 atagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 32129728  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32129729 caaattgaagaaatggagaaacatataaatggagaggatcctaaccc 32129775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 11775856 - 11775709
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnn-caagattttatgtgtctttatctct 114  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||        ||||||||||||||| |||||||||    
T  11775856 atagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgtcattaattatattttactttttttcaagattttatgtgtttttatctct 11775757  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  11775756 ccaaattgaagaaatggagaaacacataaatggagaggatcttaaccc 11775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 40753174 - 40753320
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||  ||||||||||    
T  40753174 atagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgcttttatctctc 40753273  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||    
T  40753274 caaattaaagaaatggagaagcacataaatggagaggatcctaaccc 40753320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 13032181 - 13032035
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||  |||||||||||| || ||||||| ||||||||||||||||||        |||||||||||||||||||||||||    
T  13032181 atagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccatcattaattatattttattttttt-aagattttatgtgtctttatctctc 13032083  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13032082 caaattgaagaaatggagaaacacataaatggagaggatcctaacccg 13032035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 14349864 - 14349720
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||| ||||||||||||||||| ||||    
T  14349864 agacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaga-tttatgtgtctttatctttcca 14349766  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    |||| |||||||||||||||||||||||| ||| |||| |||||||    
T  14349765 aattaaagaaatggagaaacacataaatggagaagatcttaacccg 14349720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 18625435 - 18625572
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  18625435 agacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctcca 18625534  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||  ||||||| || ||||||||||||| ||||||||    
T  18625535 aatgaaagaaattgaaaaacacataaatggagaggatc 18625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 4592858 - 4592719
Alignment:
Q  21 cacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaat 120  Q
    ||||||||||| ||||||| || |||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||| || ||||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttacttttttcaatattttatgtgtatt-atctctccaaat 4592760  T
Q  121 tgaagaaatggagaaacacataaatgaagaggatcctaacc 161  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  4592759 tgaagaaatggagaaacacataaatggagaggattctaacc 4592719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 39902474 - 39902339
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||| ||||| ||||||| |||||||||||| ||  | |||| ||||||||||||||||||        |||||||||||||||||||||||||||||    
T  39902474 acacaagaaatagatggtgggtcctaccactaaatggattccaccatcattaattatattttactttttttaagattttatgtgtctttatctctccaaa 39902375  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||||||||||||||||||||| ||||||||    
T  39902374 ttgaagaaatggagaaacacataaatggagaggatc 39902339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 1475686 - 1475796
Alignment:
Q  52 agtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagag 151  Q
    |||| ||||||| ||||||||||||||||||       |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  1475686 agtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatcactccaaattgaagaaatgaaaaaacacataaatgaagag 1475785  T
Q  152 gatcctaaccc 162  Q
    |||||||||||    
T  1475786 gatcctaaccc 1475796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 8440983 - 8441130
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||| ||||||| ||||||   | |||||||||||| ||||||| ||||||||||||||||||        |||||| ||||||| ||||||||||    
T  8440983 atagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaattatattttactttttttaagattgtatgtgtatttatctctc 8441082  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    |||||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  8441083 caaattgatgaaacggagaaacacataaatggagatgatcctaacccg 8441130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 34827255 - 34827111
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta-nnnnnnncaagattttatgtgtctttatctct 114  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||        ||| ||||  |||||||||||||||    
T  34827255 atagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattatattttactttttttcaaaattt--tgtgtctttatctct 34827158  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
     |||||| |||||||||| ||||| |||||||  ||||||||||||||    
T  34827157 tcaaatttaagaaatgga-aaacatataaatggtgaggatcctaaccc 34827111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 15434412 - 15434505
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||||||| ||||||||||  |||||||||||||||||| ||| |||||| ||||||| |||||||| ||||||| ||||||| ||||||||    
T  15434412 agaggaatgatatgtgaacaaccaaattgtacaaccaacaacttatttgctacttttaatgatattttgcttgattttgatttctgtgctcctc 15434505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 3057170 - 3057310
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||||||||| |||||||||||||||| |||||||||| ||  ||||||||||||||||||        || | |||| |||||||||||||| ||||    
T  3057170 acacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttacttttttaaaaaatttaagtgtctttatctcttcaaa 3057269  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    | ||||||||||||| | |||||| || ||| |||| ||||    
T  3057270 tagaagaaatggagagagacataattggagaagatcttaac 3057310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 900884 - 900978
Alignment:
Q  359 aagaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||| ||||||||||  |||||||||||||||||| ||| |||||||||||||| ||||||||  |||||| | ||||  ||||||||    
T  900884 aagaggaatgatatgtgaacaaccaaattgtacaaccaacaacttatttgctatttttaatgatattttgcatgattttgttttccatgctcctc 900978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 420
Target Start/End: Original strand, 30839719 - 30839779
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaata 420  Q
    |||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  30839719 agaggaatgatatgtgaacaactaaattgtacgaccaacaatttacttgctatttttaata 30839779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 43309107 - 43309062
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  43309107 caagattttatgtgtctttatctcttcaaattgaagaaatggagaa 43309062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 82
Target Start/End: Original strand, 28142807 - 28142853
Alignment:
Q  36 gtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  28142807 gtggatcctaccattaagtgagtcccaccatcattaattatatttta 28142853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 36290665 - 36290599
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| |||||| ||||| |||||||||  |||||| |||||||||||| |||||    
T  36290665 atagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattatttttta 36290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 10242811 - 10242752
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||||||||||||||| | ||||||||||| | |||||||| ||||||||||||||    
T  10242811 tgtgtctttatctctccaaatggtagaaatggagagaaacataaat-aagaggatcctaac 10242752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 27428893 - 27428949
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaa 72  Q
    |||||||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  27428893 atagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 3057479 - 3057335
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| |||||| | ||| ||||||||||||| |||||||| |||  |||||||||||| || ||       |||  |||| ||||||||||||||||    
T  3057479 atagacaaaaaaaaaagatgatggatcctaccacaaagtgagttccatcatcattaattattttatacttttttcaaacttttttgtgtctttatctctc 3057380  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
     |||| |||||||  |||| | ||||||||| ||| |||| ||||    
T  3057379 aaaatggaagaaagtgagagaaacataaatggagatgatcttaac 3057335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 31156609 - 31156551
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaatta 75  Q
    ||||||||||||||||| |||||||| ||| || |||||||||| |||||||||||||||    
T  31156609 atagacacaaaaaataagtggtggat-ctatcattaagtgagtctcactatcattaatta 31156551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 38283828 - 38283887
Alignment:
Q  96 tttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||||| ||||||||||||||| | ||||||||||| |  |||||||||||||||    
T  38283828 tttatgtgtctatatctctccaaattgtaaaaatggagaaaaatttaaatgaagaggatc 38283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 443
Target Start/End: Original strand, 2250327 - 2250409
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttc 443  Q
    ||||||||| ||||||| ||| ||||||||||| |||||| ||| ||  |||||||||| ||||||||  |||||| ||||||    
T  2250327 gaggaatgatatgtgaagaatcaaattgtacaatcaacaatttatttattatttttaatgatattttgcatgattttgatttc 2250409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 10173927 - 10173867
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||||||||||||||  | |||||||||||  ||||||||| |||||||| ||||    
T  10173927 tgtgtctttatctctccaaatgaaggaaatggagaaggacataaatggagaggatcttaac 10173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 2984402 - 2984468
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||| ||||||| || || |||||| |||||| || ||||||| |||||||||||| |||||    
T  2984402 atagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattatttttta 2984468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 23253778 - 23253736
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaa 136  Q
    ||||||||||||| ||||||||||||| | |||||||||||||    
T  23253778 attttatgtgtctctatctctccaaatggtagaaatggagaaa 23253736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 129
Target Start/End: Complemental strand, 30355256 - 30355218
Alignment:
Q  91 aagattttatgtgtctttatctctccaaattgaagaaat 129  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  30355256 aagattttttgtgtctttatctctccaaattaaagaaat 30355218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 41660169 - 41660103
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| |||||| ||  | ||||| ||| ||||||| |||||||||||| |||||    
T  41660169 atagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattatttttta 41660103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 30839962 - 30840003
Alignment:
Q  412 tttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||||||||| ||||||||||||||| | ||||||    
T  30839962 tttttaataatattttgcttgatttcgatttctgtactcctc 30840003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 43405620 - 43405567
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaa 148  Q
    |||||||| ||||||||| | ||||| ||| ||||||||||| |||||||||||    
T  43405620 ttttatgtatctttatcttttcaaatggaacaaatggagaaagacataaatgaa 43405567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 14733545 - 14733489
Alignment:
Q  100 tgtgtctttatctctccaaattgaagaaatggagaaacaca-taaatgaagaggatc 155  Q
    ||||||||||||| || |||| ||||||||||||||| | | |||||||||||||||    
T  14733545 tgtgtctttatctttctaaatggaagaaatggagaaaaaaattaaatgaagaggatc 14733489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 32316531 - 32316571
Alignment:
Q  36 gtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    |||||| ||||||||||||||||||||| ||||| ||||||    
T  32316531 gtggattctaccactaagtgagtcccacaatcataaattat 32316571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 32793433 - 32793324
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||||||||| ||| ||  || ||| |||||||  ||||||| ||||| ||||||||||||       |||||||||||  |||||||||||| ||||    
T  32793433 acacaaaaaatagatgatgattcttactactaagtaggtcccacaatcatcaattatattttacttttttcaagattttattcgtctttatctcttcaaa 32793334  T
Q  120 ttgaagaaat 129  Q
    |  |||||||    
T  32793333 tgaaagaaat 32793324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 30426681 - 30426827
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  30426681 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 30426780  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30426781 caaattgaagaaatggaaaaacacataaatggagaggatcctaaccc 30426827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 10672524 - 10672670
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||        || ||||||||| | ||||||||||    
T  10672524 atagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaattatattttaccctttttaaaattttatgtatttttatctctc 10672623  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  10672624 caaattgaataaatgaagaaacacataaatgaagaggatactaaccc 10672670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 36991419 - 36991273
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| || ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||||||| |       |||||||||| |||||||||||||||    
T  36991419 atagacataagaaatagatgatgggtcctaccactaagtgggtcccaccatcattaattatatttgacttttttcaagattttacgtgtctttatctctc 36991320  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36991319 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 36991273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 28069780 - 28069643
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||||    
T  28069780 agacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctcca 28069681  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||| |||||||| || ||||||||||||| ||||||||    
T  28069680 aatggaagaaattgaaaaacacataaatggagaggatc 28069643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 24102079 - 24101939
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |       |||||||||| |||||||||||||||    
T  24102079 atagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattatatttcatttttttcaagattttacgtgtctttatctctc 24101980  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcc 156  Q
    |||||| || |||| || ||||||||||||| |||||||||    
T  24101979 caaattaaaaaaatagaaaaacacataaatggagaggatcc 24101939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 41511317 - 41511179
Alignment:
Q  24 aaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattga 123  Q
    |||||||| || |||| ||||| |||||||||  | |||| ||||||||||||||||||       ||||||||||||||| ||||||||||||||||||    
T  41511317 aaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattga 41511218  T
Q  124 agaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  41511217 agaaatggaaaaacacataaatggagaggatcctaaccc 41511179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 40695259 - 40695404
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||| | |||||||||||||||||| |||| ||||||| ||||||||||       ||||||||||||| |||||||| |||    
T  40695259 atagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcattagttatattttacttttttcaagattttatgtttctttatccctc 40695358  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacc 161  Q
    ||||||||||||||||| ||| ||||||||   |||||||||||||    
T  40695359 caaattgaagaaatggataaatacataaatagggaggatcctaacc 40695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 28318934 - 28319061
Alignment:
Q  36 gtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    |||| ||||||||||||||| |||| || ||||||||||||||||||        || ||||||||||||||| ||||||||||||||||||||||||||    
T  28318934 gtgggtcctaccactaagtgggtccaaccatcattaattatattttactttttttaaaattttatgtgtctttgtctctccaaattgaagaaatggagaa 28319033  T
Q  136 acacataaatgaagaggatcctaacccg 163  Q
    |||| |||||| |||  |||||||||||    
T  28319034 acacgtaaatggagaaaatcctaacccg 28319061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 5033091 - 5033023
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  5033091 attttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaaccc 5033023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 27490028 - 27490162
Alignment:
Q  26 aaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaag 125  Q
    ||||||||| |||||||||| |||||||||||||  | |||||||||||||||||||       ||||||||||||| | ||| ||||| ||||| ||||    
T  27490028 aaaataaattgtggatcctatcactaagtgagtctaaatatcattaattatattttacttttttcaagattttatgtatttttgtctcttcaaatggaag 27490127  T
Q  126 aaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||| |||||| ||||||||| ||| |||| ||||    
T  27490128 aaattgagaaagacataaatggagaagatcttaac 27490162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 10652629 - 10652776
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnn--caagattttatgtgtctttatctc 113  Q
    ||||| |||||||||  ||||||| || ||| ||||| || ||||||| |||||||||||||||||          ||| ||||||||||| ||||||||    
T  10652629 atagatacaaaaaattgatggtgggtcatactactaattgggtcccaccatcattaattatatttttactttttttcaaaattttatgtgt-tttatctc 10652727  T
Q  114 tccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  10652728 tccaaattgaagaaatgaagaaacacataaatggagaggatcttaaccc 10652776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 44859188 - 44859324
Alignment:
Q  25 aaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaa 124  Q
    ||||||| ||||||| | ||||||||||||| ||||||| ||||||||||||||||||        || |||| | ||||||||||||||||||||| ||    
T  44859188 aaaaatagatggtgggttctaccactaagtgggtcccaccatcattaattatattttattttttaaaaaatttcacgtgtctttatctctccaaattaaa 44859287  T
Q  125 gaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||| ||| |||||| |||||| ||| |||||||||||    
T  44859288 gaaaaggaaaaacacgtaaatggaga-gatcctaaccc 44859324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 12177618 - 12177722
Alignment:
Q  58 tcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcct 157  Q
    |||||| ||||||| ||||||||||       ||||||||||  |||| ||||||||  |||||||||||||||||||||||||||||  ||||||||||    
T  12177618 tcccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagaggatcct 12177717  T
Q  158 aaccc 162  Q
    |||||    
T  12177718 aaccc 12177722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 12422046 - 12422150
Alignment:
Q  58 tcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcct 157  Q
    |||||| ||||||| ||||||||||       ||||||||||  |||| ||||||||  |||||||||||||||||||||||||||||  ||||||||||    
T  12422046 tcccaccatcattagttatattttatttttttcaagattttaattgtccttatctctttaaattgaagaaatggagaaacacataaatagagaggatcct 12422145  T
Q  158 aaccc 162  Q
    |||||    
T  12422146 aaccc 12422150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 37819956 - 37819877
Alignment:
Q  365 aatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttct 444  Q
    ||||| || ||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||| | ||||||||||||||    
T  37819956 aatgatatttgaacaactaaattgtacaaccaacaatttatttgctatgtttaataatattttatctgatttcgatttct 37819877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 45113334 - 45113195
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||| |||| ||||||| ||| ||||||||||| ||||||  |||||||||||| |||||       ||| ||||||||||||| |||||||    
T  45113334 atagacacaaaagaatagatggtgggtccaaccactaagtgtgtcccatcatcattaattattttttatttttttcaaaattttatgtgtctatatctct 45113235  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||| | | ||||| ||||  | ||||||| |||||||    
T  45113234 ccaaatggtaaaaatgaagaaggatataaatggagaggat 45113195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 37966459 - 37966598
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||||||||| || || | |||||||||||| |||  |||| || ||||||||||||||||        ||  |||||||| ||||||||||||||||    
T  37966459 acacaaaaaatagattgtaggtcctaccactaattgaa-cccaataccattaattatattttactttttttaaatttttatgtatctttatctctccaaa 37966557  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |  |||||||||||||| |||||||| |||| |||| ||||    
T  37966558 taaaagaaatggagaaagacataaattaagaagatcttaac 37966598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 26749560 - 26749626
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| || ||| ||||| ||||||||| ||||||| |||||||||||| |||||    
T  26749560 atagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttttta 26749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 34612627 - 34612562
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttt 81  Q
    ||||||||||||||||| |||||| ||||| ||||||||| ||| ||| |||||||||||| ||||    
T  34612627 atagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 39143508 - 39143443
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||| ||||| |||| ||||||||||  |||||||||||||| |||| ||||||||||||||||||    
T  39143508 ttttttgtgtttttacctctccaaataaaagaaatggagaaaaacattaatgaagaggatcctaac 39143443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 8412292 - 8412179
Alignment:
Q  41 tcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacaca 140  Q
    ||||||||||||||   || ||| ||| ||||||||||||||       ||| ||||||||||| |||||||||| |||| ||| ||||| ||||| |||    
T  8412292 tcctaccactaagtagatctcaccatcgttaattatattttacttttttcaatattttatgtgtatttatctctctaaatggaaaaaatgaagaaaaaca 8412193  T
Q  141 taaatgaagaggat 154  Q
    |||||| |||||||    
T  8412192 taaatggagaggat 8412179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 5033147 - 5033108
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtg 55  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  5033147 atagacacaaaaaatagatggtgggtcctaccactaagtg 5033108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 28584581 - 28584639
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||| ||| |||||||||||||    
T  28584581 ttttatatgtttttatctctccaaatggaataaatggagaaagaca-aaatgaagaggat 28584639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 42761776 - 42761710
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||| |||||| || ||||||||||||||| |||| || |||  |||||||||||| |||||    
T  42761776 atagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattatttttta 42761710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 21492767 - 21492730
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatgga 132  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  21492767 ttttgtgtgtctttatctctccaaatggaagaaatgga 21492730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 28403232 - 28403300
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||| ||| || ||||||||| |||| ||| ||||| |||||   |||||||||||||||||||||||    
T  28403232 attttgtgtatccttatctctctaaatggaacaaatgaagaaaattataaatgaagaggatcctaaccc 28403300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 35316888 - 35316742
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||| ||||||||||||||    
T  35316888 atagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatatgtctttatctctc 35316789  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  35316788 caaattgaagaaatggagaaacacgtaaatggagaggatcctaaccc 35316742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 28564955 - 28564815
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaa-gattttatgtgtctttatctct 114  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||        || ||||||||||||||||||||||    
T  28564955 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttaaaagattttatgtgtctttatctct 28564856  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28564855 ccaaattgaagaaatggagaaacacataaatggagaggatc 28564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 13238744 - 13238605
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  13238744 atagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctc 13238645  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||||||||||||| ||||||| |||||||| ||||||||    
T  13238644 caaattgaagaaattgagaaacgcataaatggagaggatc 13238605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 23259499 - 23259645
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||  |||||| |||||| ||||||||  |||||| ||||||||||||||||||        |||||||||| |||||||||| |||    
T  23259499 atagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaattatattttactttttttaagattttatatgtctttatccctc 23259598  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
     |||||||||||||| ||||||  ||||||||||| ||| |||||||    
T  23259599 aaaattgaagaaatgaagaaacgtataaatgaagatgattctaaccc 23259645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 39465797 - 39465699
Alignment:
Q  57 gtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||| ||||||||||||||||||       ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  39465797 gtcccaccatcattaattatattttacttttttcaagattttatgtgtttttatctctccaaattgaaaaaatggagaaacacataaatggagaggatc 39465699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 10877686 - 10877619
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10877686 attttatgtgt-tttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 10877619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 41983401 - 41983497
Alignment:
Q  65 atcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||       ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  41983401 atcattaattatattttacttttttcaaga-tttatgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaaccc 41983497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 45625115 - 45625199
Alignment:
Q  57 gtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacat 141  Q
    ||||||| |||||||||| |||||||       |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  45625115 gtcccaccatcattaattttattttatatttttcaagattttacgtgtctttatctctctaaattgaagaaatggagaaacacat 45625199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 443
Target Start/End: Original strand, 33538175 - 33538258
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttc 443  Q
    |||||||||| ||||||| ||| |||||||||||||||||| ||| || ||||||||||| ||||||||  |||||| ||||||    
T  33538175 agaggaatgatatgtgaaaaatcaaattgtacaaccaacaacttatttactatttttaatgatattttgcatgattttgatttc 33538258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 374499 - 374585
Alignment:
Q  65 atcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagag 151  Q
    ||||||||||||||||||       ||||||||||||||| |||||||||| ||||  |||||| ||||||||||||||||| ||||    
T  374499 atcattaattatattttacttttttcaagattttatgtgtttttatctctctaaatgaaagaaagggagaaacacataaatggagag 374585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 375056 - 374946
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||| |||||| |||||  |||||||| ||||||| |||||||||||| |||||            |||||||||||||||||||||    
T  375056 atagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttact----------ttttatgtgtctttatctctc 374967  T
Q  116 caaattgaagaaatggagaaa 136  Q
     |||| ||| |||||||||||    
T  374966 taaatggaacaaatggagaaa 374946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 2061366 - 2061296
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||  ||||||| |||||||| ||||    
T  2061366 caagattttatgcgtctttatctctccaaatggaagaaattgagatactaataaatggagaggatcttaac 2061296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 8988918 - 8988791
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||| || | | ||||| ||||||||| ||||||| |||||||||||| |||||            |||||||||||||||||||||    
T  8988918 atagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttat-----------ttttatgtgtctttatctctc 8988830  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggat 154  Q
     |||| ||| |||||||||||   ||||||| |||||||    
T  8988829 taaatggaacaaatggagaaatttataaatggagaggat 8988791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 4446908 - 4446974
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||| |||||| || ||||||||||||||||| || ||  |||||||||||||||| |||||    
T  4446908 atagacacataaaatagatagtggatcctaccactaattgggtttcactatcattaattatttttta 4446974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 12949459 - 12949389
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||||||| ||||||||||||||||| | ||||| ||||||| ||||| ||| ||| |||| ||||    
T  12949459 caagattttatgtatctttatctctccaaataggagaaacggagaaagacatagatggagaagatcttaac 12949389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 23459858 - 23459924
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| ||| || ||||| |||||| || ||||||| |||||||||||| |||||    
T  23459858 atagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 23459924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 42075456 - 42075510
Alignment:
Q  97 ttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagag 151  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  42075456 ttatgtgtctttatctctccaaatggaagaaatggataaactaataaatggagag 42075510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 3354844 - 3354903
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    ||||||||||||||||||||| |||| ||| |||||||||||   ||||||||| |||||    
T  3354844 ttttatgtgtctttatctctctaaatagaacaaatggagaaatttataaatgaaaaggat 3354903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 28029881 - 28029834
Alignment:
Q  24 aaaaaataaatggtggatcctaccactaagtgagtcccactatcatta 71  Q
    |||||| ||||||||||||||| |||||| ||| ||||||||||||||    
T  28029881 aaaaaaaaaatggtggatcctatcactaaatgaatcccactatcatta 28029834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Complemental strand, 29188647 - 29188588
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    ||||||||||||||||||||| |||| ||| |||||||||||   ||||||| |||||||    
T  29188647 ttttatgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 29188588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 673222 - 673185
Alignment:
Q  125 gaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  673222 gaaatggagaaacacataaatggagaggatcttaaccc 673185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 135
Target Start/End: Complemental strand, 30824166 - 30824122
Alignment:
Q  91 aagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    |||||||| ||||||| |||||||| |||| ||||||||||||||    
T  30824166 aagattttttgtgtctatatctctctaaatggaagaaatggagaa 30824122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 41073026 - 41073070
Alignment:
Q  91 aagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    |||||||| |||||||||||||||| ||||  |||||||||||||    
T  41073026 aagattttttgtgtctttatctctctaaatgaaagaaatggagaa 41073070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 43719959 - 43720106
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||        |||||||||||||||||||||||||    
T  43719959 atagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccatcattaattatattttattttttttaagattttatgtgtctttatctctc 43720058  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  43720059 caaattgaagaaatggagaaacacataaatggagaagatcctaacccg 43720106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 2230046 - 2229899
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||| ||| |||||||||||||||  | |||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  2230046 atagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 2229947  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccg 163  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2229946 caaattaaagaaatagagaaacacataaatgaagaggatcctaacccg 2229899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 34373597 - 34373727
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||| ||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||| ||| ||||||||||||    
T  34373597 atagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttttgtctctttatctctc 34373696  T
Q  116 caaattgaagaaatggagaaacacataaatg 146  Q
    |||||||||||||||||||||||||||||||    
T  34373697 caaattgaagaaatggagaaacacataaatg 34373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 34373894 - 34373750
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| |||||||||||| |  ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  34373894 atagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 34373795  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||| ||||| ||||||||||  ||| |||||||||||||    
T  34373794 caaattgaaaaaatgaagaaacacattgatggagaggatcctaac 34373750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 27033714 - 27033591
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  27033714 atagacacaagaaatagatggtgggtcctaccactaagtggatcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 27033615  T
Q  116 caaattgaagaaatggagaaacac 139  Q
    ||||||||||||||||||||||||    
T  27033614 caaattgaagaaatggagaaacac 27033591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 40851837 - 40851690
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaatt-atattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||||||| ||||||| | | ||||||||||| |||| || |||||||| | ||||||||       |||||||||||||||||||||||||    
T  40851837 atagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccatcattaaatcatattttacttttttcaagattttatgtgtctttatctct 40851738  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40851737 ccaaattgaagaaatggagaaatacataaatggagaggatcctaaccc 40851690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 19830442 - 19830591
Alignment:
Q  15 aatagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaa-gattttatgtgtctttatctc 113  Q
    ||||||||||||||||| ||||||| |||||||| |||||| ||||||| ||||||||||||||||||        || |||||||||||||||||||||    
T  19830442 aatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccatcattaattatattttaccttttttaaagattttatgtgtctttatctc 19830541  T
Q  114 tccaaattgaagaaatggagaaacacat-aaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||| |||||||| ||||| |||||||| ||||||    
T  19830542 tccaaattgaagaaatggaaaaacacataaaatggagaggatcttaaccc 19830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 46167456 - 46167326
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| |||||||||||||||  ||| || || |||||||||||||||       ||||||| ||| ||||||||||||||    
T  46167456 atagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaattatattttacttttttcaagattatatttgtctttatctctc 46167357  T
Q  116 caaattgaagaaatggagaaacacataaatg 146  Q
     |||||||||||||||| |||||||||||||    
T  46167356 taaattgaagaaatggaaaaacacataaatg 46167326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 550834 - 550972
Alignment:
Q  22 acaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaatt 121  Q
    |||||||||| ||||||||||||| || |||||| ||||||| || |||| ||||||||||        || ||||||||| |||||||||||||||||     
T  550834 acaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttatattttacttttttaaaaattttatgtatctttatctctccaaatg 550933  T
Q  122 gaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||||||||| ||||||||| |||||||| ||||    
T  550934 gaagaaatggagaaagacataaatggagaggatcttaac 550972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 12403021 - 12402883
Alignment:
Q  24 aaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnnc-aagattttatgtgtctttatctctccaaattg 122  Q
    ||||| || ||||||||| ||||||||||||||||||||| || |||||||||||||||         |||||||||||||||||||||||||||||||     
T  12403021 aaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttacttttttttaagattttatgtgtctttatctctccaaatta 12402922  T
Q  123 aagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |  ||||| ||||||||||||||| ||| |||||||||||    
T  12402921 agaaaatgaagaaacacataaatggaga-gatcctaaccc 12402883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 48084883 - 48084744
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||| |||| ||||||| ||| ||||||||||| ||||||  |||||||||||| |||||       ||| ||||| ||||||| |||||||    
T  48084883 atagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctct 48084784  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||| | ||||||||||||  ||||||||| |||||||    
T  48084783 ccaaatggtagaaatggagaaggacataaatggagaggat 48084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 360 - 452
Target Start/End: Original strand, 2043731 - 2043823
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcct 452  Q
    |||||||||| |||| || || ||||||||||||||||||| ||| ||||||| |||||| |||||||| ||||||||||||| | |||||||    
T  2043731 agaggaatgatatgtaaataactaaattgtacaaccaacaacttatttgctatctttaatgatattttgattgatttcgatttatgtgctcct 2043823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 26847828 - 26847736
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||  |||||| | ||||  ||||||||    
T  26847828 gaggaatgatatgtgaacaatcaaattgtacaaccaacaacttatttgctatttttaatgatattttgcatgattttgttttccgtgctcctc 26847736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 31523680 - 31523808
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||| |||||| |||||  |||||||| ||||||| |||||||||||| |||||            |||||||||||||||||||||    
T  31523680 atagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttact----------ttttatgtgtctttatctctc 31523769  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggat 154  Q
     |||| ||| |||||||||||   ||||||| |||||||    
T  31523770 taaatggaacaaatggagaaatttataaatggagaggat 31523808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 42613143 - 42613015
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| ||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||| |||||            |||||||||||||||||||||    
T  42613143 atagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttact----------ttttatgtgtctttatctctc 42613054  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggat 154  Q
     |||| ||| |||||||||||   ||||||| |||||||    
T  42613053 taaatagaacaaatggagaaatttataaatggagaggat 42613015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 52859468 - 52859528
Alignment:
Q  91 aagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagag 151  Q
    |||||||||||||| ||||| ||||||||| | ||||||||||||| ||||||||||||||    
T  52859468 aagattttatgtgtatttatttctccaaatggtagaaatggagaaagacataaatgaagag 52859528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 33979997 - 33979937
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    ||||||||||||||||||||||| |||||| || ||| | |||| ||||||||||||||||    
T  33979997 atagacacaaaaaataaatggtgaatcctatcattaaataagtctcactatcattaattat 33979937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 155
Target Start/End: Original strand, 49289042 - 49289102
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    |||||||||||||||| |||||||||  || ||||||||||| ||||||||||||| ||||    
T  49289042 ttttatgtgtctttatttctccaaatgaaacaaatggagaaaaacataaatgaagatgatc 49289102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 427
Target Start/End: Original strand, 40034727 - 40034794
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatatttt 427  Q
    |||| ||||| ||||||||| | |||||||||||||||||| ||| ||  ||||||||||||||||||    
T  40034727 agagaaatgatatgtgaacattcaaattgtacaaccaacaacttatttattatttttaataatatttt 40034794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 49679282 - 49679348
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| ||| || ||||| |||||| || ||||||| |||||||||||| |||||    
T  49679282 atagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattatttttta 49679348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 566794 - 566925
Alignment:
Q  24 aaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattga 123  Q
    |||||||| |||| |||||||| || |||||| |||||||  | |||| ||||||||||       ||||||||||||| | ||||||||||||||| ||    
T  566794 aaaaaatatatggcggatcctatcattaagtgggtcccacctttattatttatattttacttttt-caagattttatgtatttttatctctccaaatgga 566892  T
Q  124 aga----aatggagaaacacataaatgaagagg 152  Q
    |||    |||||| ||| |||||||||||||||    
T  566893 agaaattaatggataaagacataaatgaagagg 566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 32577520 - 32577476
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32577520 caagatttt-tgtgtctttatctctccaaatagaagaaatggagaa 32577476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 3009233 - 3009173
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||||||||||||||| |||| ||| |||||||||||   ||||||| ||||||||    
T  3009233 ttttatgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggatc 3009173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 159
Target Start/End: Original strand, 25506612 - 25506650
Alignment:
Q  121 tgaagaaatggagaaacacataaatgaagaggatcctaa 159  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  25506612 tgaagaaatggagaaacatataaatggagaggatcctaa 25506650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 20485808 - 20485869
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||||||||| | ||||||||||||| | ||||||||||||| |  |||||| ||||||||    
T  20485808 attttatgtgtttatatctctccaaatggtagaaatggagaaaaatttaaatggagaggatc 20485869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 21151215 - 21151069
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| |||| |||||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  21151215 atagacacaagaaatagatggaggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 21151116  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||    
T  21151115 caaattgaagaaatggagaaacacataaatggagagaatcctaaccc 21151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 16 - 168
Target Start/End: Original strand, 25084740 - 25084892
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| |||||||||||||||||||||     
T  25084740 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaaaattttatgtgtctttatctctt 25084839  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaacccgaaata 168  Q
    |||||| || ||||||||||||||||||||| |||||||| |||||| |||||    
T  25084840 caaattaaaaaaatggagaaacacataaatggagaggatcataacccaaaata 25084892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 16366581 - 16366438
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||| || ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||       |||||||||| |||| ||||||||||    
T  16366581 atagacataagaaatagatggtggatcctaccactaagtgtgtcccaccatcattaattatattttacttttttcaagattttacgtgtttttatctctc 16366482  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaa 159  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||    
T  16366481 caaattgaagaaatggagaaacacataaatggagatgatcctaa 16366438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 18198320 - 18198180
Alignment:
Q  15 aatagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    ||||||||||||||||| ||||||| | || |||||||||||||||||| ||||||||||||||||||       ||||||||||||||  |||||||||    
T  18198320 aatagacacaaaaaatagatggtgggttctgccactaagtgagtcccaccatcattaattatattttatttttttcaagattttatgtgattttatctct 18198221  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
     ||||||||||||||||||||||||||||||| ||||||||    
T  18198220 acaaattgaagaaatggagaaacacataaatggagaggatc 18198180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 4888530 - 4888391
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| || |||| ||||||||||||||  ||||||| ||||||||||||||||||        |||||||||||||||||||||||||    
T  4888530 atagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccatcattaattatattttatgttttttaagattttatgtgtctttatctctc 4888431  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  4888430 caaatggaagaaattgagaaacacataaatgaagaggatc 4888391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 45260439 - 45260586
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| || ||||||||||||||||||||  |||||  ||||||||||||||||||        |||||||||||||||||||||||||    
T  45260439 atagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctc 45260538  T
Q  116 caaattgaagaaatggagaaacacataaatgaagagg-atcctaaccc 162  Q
    ||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  45260539 caaattgaagaaatggagaaacacataaatagagaggaatcctaaccc 45260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 7362631 - 7362501
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| || ||||||||| || || |||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  7362631 atagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 7362532  T
Q  116 caaattgaagaaatggagaaacacataaatg 146  Q
    |||||||||||||||||||||||||||||||    
T  7362531 caaattgaagaaatggagaaacacataaatg 7362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 12139390 - 12139245
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgag-tcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||||||| ||||||| |||||||| |||||| | |||||| ||||||||||||||||||        ||||||||||||||  ||||||||    
T  12139390 atagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaattatattttactttttttaagattttatgtgt--ttatctct 12139293  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  12139292 ccaaattgaagaaatggagaaacacataaatggagaggatcctaaccc 12139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 9559066 - 9559201
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||| |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  9559066 atagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagattttatgtgtctttatctctc 9559165  T
Q  116 caaattgaagaaatggagaaacacataaatgaagag 151  Q
    ||||| |||||||| |||||||| ||||||| ||||    
T  9559166 caaatggaagaaatcgagaaacatataaatggagag 9559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 44648027 - 44647882
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccact--atcattaattatattttannnnnnncaagattttatgtgtctttatctc 113  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||| | ||  ||||||||||||||||||       ||||||||||||||||||||||||    
T  44648027 atagacacaaaaaatagatggtggatccgaccactaagtgggtctccctccatcattaattatattttacatttttcaagattttatgtgtctttatctc 44647928  T
Q  114 tccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
       |||||||||||||||||||||||||||||| |||||||| ||||||    
T  44647927 ---aaattgaagaaatggagaaacacataaatggagaggatcataaccc 44647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 47226092 - 47226229
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    ||||||||||||  |||||| ||| |||||||| || ||||||| ||||||||||||||||||       ||||||||||||||| ||||||||||||||    
T  47226092 acacaaaaaata--tggtgggtcccaccactaaatgggtcccaccatcattaattatattttactttttccaagattttatgtgt-tttatctctccaaa 47226188  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  47226189 ttgaagaaatagagaaacacataaatggagaggatcctaac 47226229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 38174620 - 38174713
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||||||| | ||||||||  ||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  38174620 agaggaatgatacgtgaacaaccaaattgtacaaccaataacttacttgatatttttaataatattttgcttgatttcgatttctgtgctcctc 38174713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 32916019 - 32915883
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||||||||||||| |||| |||||||| |||||||||||||| ||||| |||||||||||         ||  |||| ||||||||||||||||    
T  32916019 atagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattatatttt---tttttaaaacttttttgtgtctttatctctc 32915923  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||| ||||||||||||||  |||||||||  |||||||    
T  32915922 caaatggaagaaatggagaagaacataaatggggaggatc 32915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 160
Target Start/End: Complemental strand, 29631111 - 29630967
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||| ||| || |||| ||| ||||||| ||  ||||||||||||||||||||  ||||       ||| ||||||||||||||||| ||||    
T  29631111 atagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatcattaattattctttacttttttcaaaattttatgtgtctttatatctc 29631012  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||  |||||||||||||| |||| |||| |||||||| ||||    
T  29631011 caaatgaaagaaatggagaaagacatgaatggagaggatcttaac 29630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 33450570 - 33450431
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||| |||| ||||||| ||| ||||||||||| ||||||  |||||||||||| |||||       ||| ||||| ||||| | |||||||    
T  33450570 atagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtttatatctct 33450471  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||| | ||||||||||||  |||||||||||||||||    
T  33450470 ccaaatggtagaaatggagaaggacataaatgaagaggat 33450431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 47500294 - 47500433
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||| |||| ||||||| ||| ||||||||||| ||||||  |||||||||||| |||||       ||| ||||| ||||||| |||||||    
T  47500294 atagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattattttttatttttttcaaaattttgtgtgtctatatctct 47500393  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    | |||| | ||||||||||||  ||||||||| |||||||    
T  47500394 ctaaatggtagaaatggagaaggacataaatggagaggat 47500433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 45849581 - 45849505
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgattt 436  Q
    |||||||||| | ||||||||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||    
T  45849581 agaggaatgatacgtgaacaaccaaattgtacaaccaataatttatttgctatttttaataatattttgcttgattt 45849505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 47799912 - 47799978
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| || ||| ||||| ||||||||| ||||||| |||||||||||| |||||    
T  47799912 atagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttttta 47799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 34985957 - 34986095
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnn-caagattttatgtgtctttatctc 113  Q
    |||||||||||| |||| ||||||| ||  |||||||| |||||||||  |||||||||||| |||||        ||| |||||||||  || ||||||    
T  34985957 atagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcatcattaattattttttattttttttcaaaattttatgt--ctatatctc 34986054  T
Q  114 tccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    ||||||| | ||||||||||||| ||||||||| |||||||    
T  34986055 tccaaatggtagaaatggagaaagacataaatggagaggat 34986095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 428
Target Start/End: Original strand, 6494744 - 6494811
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttg 428  Q
    ||||||||| ||||||||||  ||||||||||| ||| || ||| |||||||||||||| ||||||||    
T  6494744 gaggaatgatatgtgaacaacaaaattgtacaatcaataacttatttgctatttttaatgatattttg 6494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 30588598 - 30588532
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| ||  || ||||| ||||||||| ||||||| |||||||||||| |||||    
T  30588598 atagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattatttttta 30588532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 47271205 - 47271263
Alignment:
Q  102 tgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||||||||||||||||||| | |||||| | | |||||||||||||| ||||    
T  47271205 tgtctttatctctccaaattgaagaattagagaaagagacaaatgaagaggatcttaac 47271263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 6882149 - 6882214
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||||||||||||||||||| ||||| ||| |||||||||||   ||||||  |||||||||||||    
T  6882149 ttttatgtgtctttatctcttcaaatggaacaaatggagaaagttataaattgagaggatcctaac 6882214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 19889046 - 19889156
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||| ||||||||||| | |||| ||||| ||||||||| || |||| |||||||||||| |||||            |||||||||||||||||||||    
T  19889046 atagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttact----------ttttatgtgtctttatctctc 19889135  T
Q  116 caaattgaagaaatggagaaa 136  Q
     |||| ||| |||||||||||    
T  19889136 taaatggaataaatggagaaa 19889156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 39855825 - 39855891
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||| |||| | ||||| | ||||||||||||||| ||||||  ||||||||||| ||||||    
T  39855825 atagacacataaaaaagatggtcggtcctaccactaagtgggtcccatcatcattaattaaatttta 39855891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 32916163 - 32916098
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    |||| ||||| |||||||||| |||| |||||||||||||||   ||||||| ||||||| |||||    
T  32916163 ttttgtgtgtatttatctctcaaaatggaagaaatggagaaagttataaatggagaggattctaac 32916098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 989192 - 989132
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    |||||||||||||||| || |||| ||||||||||||||  |||| || || |||||||||    
T  989192 atagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccataattaattat 989132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 19027695 - 19027751
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcatta 71  Q
    |||||||||||| |||||||||||| ||||| |||||||||  |||||| |||||||    
T  19027695 atagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 20726941 - 20726885
Alignment:
Q  16 atagacacaaaaaa-taaatggtggatcctaccactaagtgagtcccactatcatta 71  Q
    |||||||||||||| |||||||||| ||||| |||||||||  |||||| |||||||    
T  20726941 atagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 30588529 - 30588489
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaa 135  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  30588529 ttttatgtgtctttatctctctaaatggaacaaatggagaa 30588489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 33608977 - 33609033
Alignment:
Q  104 tctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaac 160  Q
    ||||||||| ||||||| ||||||||||||| | ||||||||| | |||||| ||||    
T  33608977 tctttatctttccaaatggaagaaatggagagaaacataaatgtaaaggatcttaac 33609033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 46802343 - 46802403
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattat 76  Q
    ||||||| |||||||| | ||||| ||||||||||||||| ||||||| | | ||||||||    
T  46802343 atagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattat 46802403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 4804511 - 4804365
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||| ||||||||||||||||||||||    
T  4804511 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctc 4804412  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  4804411 caaattgaagaaatggagaaacatataaatggagaggatcctaaccc 4804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 29698220 - 29698080
Alignment:
Q  22 acaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaatt 121  Q
    |||||||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||| ||||||||||    
T  29698220 acaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatttctccaaatt 29698121  T
Q  122 gaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  29698120 gaagaaatggagaaacacataaatggagaggatcctaaccc 29698080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 1249164 - 1249304
Alignment:
Q  22 acaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaatt 121  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||| ||||||||    
T  1249164 acaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaatt 1249263  T
Q  122 gaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  1249264 gaagaaatggagaaacacataaatggagaggatcttaaccc 1249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 7162147 - 7162001
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| |||||| |||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||||||||    
T  7162147 atagacacaagaaatagatggtgggtcctactactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctc 7162048  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||||||||| |||||  |||||||||||||||    
T  7162047 caaattgaagaaatggagaaacacgtaaatagagaggatcctaaccc 7162001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 21159380 - 21159523
Alignment:
Q  15 aatagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||       ||||||||||||||||||||| |||    
T  21159380 aatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatatct 21159479  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    |||||||||||||||||    ||||||||| | |||||||||||||||    
T  21159480 ccaaattgaagaaatgg----acacataaacggagaggatcctaaccc 21159523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 17944225 - 17944102
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||| | |||||||||||| || ||||||| ||||||||||||||||||       ||||||||||||||| ||||||||||    
T  17944225 atagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccatcattaattatattttactttttccaagattttatgtgtttttatctctc 17944126  T
Q  116 caaattgaagaaatggagaaacac 139  Q
    ||||||||||||||||||||||||    
T  17944125 caaattgaagaaatggagaaacac 17944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 27826601 - 27826462
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||||||        ||  |||||||||||||||||||||    
T  27826601 atagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttttaaaattttttatgtgtctttatctctc 27826502  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
     |||| |||||||| |||||||||||||||| ||||||||    
T  27826501 aaaatggaagaaattgagaaacacataaatggagaggatc 27826462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 32737893 - 32737786
Alignment:
Q  60 ccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaa 159  Q
    |||| ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  32737893 ccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcctaa 32737794  T
Q  160 cccgaaat 167  Q
    ||| ||||    
T  32737793 cccaaaat 32737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 12412700 - 12412582
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||| ||||| ||||||| ||||||||||||||| || |||| ||||||||||||||||||       ||| ||||||||| | ||||||||||    
T  12412700 atagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaattatattttacttttttcaaaattttatgtatttttatctctc 12412601  T
Q  116 caaattgaagaaatggaga 134  Q
    |||||||||||||||||||    
T  12412600 caaattgaagaaatggaga 12412582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 227575 - 227714
Alignment:
Q  16 atagacacaaaa-aataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctct 114  Q
    |||||||||||| |||| ||||||| |||||||||||||||  |||||  |||||| ||||| |||||       ||| | ||| ||||||| |||||||    
T  227575 atagacacaaaagaatagatggtgggtcctaccactaagtggatcccatcatcattgattattttttacctttttcaaaactttgtgtgtctatatctct 227674  T
Q  115 ccaaattgaagaaatggagaaacacataaatgaagaggat 154  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  227675 ccaaattgtagaaatggagaagcacataaatgaagaggat 227714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 13089761 - 13089903
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||| ||| ||||||| ||||||||||||||| | ||||| ||||||||||||||||||       ||| ||||||||||| ||            
T  13089761 atagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattatattttatttttttcaaaattttatgtgtttt-------- 13089852  T
Q  116 caaattgaagaaatg-gagaaacacataaatgaagaggatcctaacccgaaa 166  Q
     ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  13089853 -aaattgaagaaatgaaagaaacacataaatgaagaggatcctaacccgaaa 13089903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 29396444 - 29396537
Alignment:
Q  360 agaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||||||| |||||||||   |||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||| | ||||||||    
T  29396444 agaggaatgatatgtgaacagccaaattgtacaaccaacaacttatttgctatttttaatgatattttgattgatttcgatttttgtgctcctc 29396537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 22957002 - 22957072
Alignment:
Q  383 aaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| | ||||||||    
T  22957002 aaattgtacaaccaacaacttacttgctatttttaataatattttacttgatttcgatttatgtgctcctc 22957072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 23831390 - 23831320
Alignment:
Q  383 aaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| | ||||||||    
T  23831390 aaattgtacaaccaacaacttacttgctatttttaataatattttacttgatttcgatttatgtgctcctc 23831320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 365 - 444
Target Start/End: Complemental strand, 21203381 - 21203302
Alignment:
Q  365 aatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttct 444  Q
    ||||| ||||||||||  ||||||||||| |||||| ||||||| ||||||||||||| ||||| ||||||| |||||||    
T  21203381 aatgatatgtgaacaaccaaattgtacaatcaacaacttacttgatatttttaataatgttttgcttgattttgatttct 21203302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 30460859 - 30460763
Alignment:
Q  40 atcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaa 136  Q
    ||||||||| ||| |||||||| |  | |||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  30460859 atcctaccattaaatgagtcccgccgttattaattatattttacttttttcaagattttatgtgtctttatctctccaaatagaagaaatgaagaaa 30460763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 24484942 - 24484876
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| |||||| ||||| ||||||||| ||||||| |||||||||||| |||||    
T  24484942 atagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattatttttta 24484876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 18141383 - 18141464
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgattt 442  Q
    ||||||||| ||||||||||  |||| ||||||||| ||| ||| || |||||||||||||||||||  |||||||||||||    
T  18141383 gaggaatgatatgtgaacaaccaaatcgtacaaccagcaacttattttctatttttaataatattttacttgatttcgattt 18141464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 453
Target Start/End: Original strand, 22995985 - 22996065
Alignment:
Q  371 atgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||  |||||||| ||||||||| ||  |||||||||||||||||||||||  |||||||||||| | ||||||||    
T  22995985 atgtgaacaaccaaattgtataaccaacaactt--ttgctatttttaataatattttgcctgatttcgatttatgtgctcctc 22996065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 453
Target Start/End: Complemental strand, 23792415 - 23792335
Alignment:
Q  371 atgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgatttctctgctcctc 453  Q
    ||||||||||  |||||||| ||||||||| ||  |||||||||||||||||||||||  |||||||||||| | ||||||||    
T  23792415 atgtgaacaaccaaattgtataaccaacaactt--ttgctatttttaataatattttgcctgatttcgatttatgtgctcctc 23792335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 7215864 - 7215923
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaatta 75  Q
    ||||||||| |||||| || |||| |||||||||||| || |||||||||||||||||||    
T  7215864 atagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 32254043 - 32254109
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||| |||||| |  |||||| ||||| || ||||||||||||||||||||||||||| |||||    
T  32254043 atagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattatttttta 32254109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 17398780 - 17398824
Alignment:
Q  90 caagattttatgtgtctttatctctccaaattgaagaaatggaga 134  Q
    ||||||||||||||||||||||||||||||| || |||| |||||    
T  17398780 caagattttatgtgtctttatctctccaaatggaggaaagggaga 17398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 28696731 - 28696782
Alignment:
Q  95 ttttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatg 146  Q
    |||| |||||||||||||||||||||   ||||||||||| |||||||||||    
T  28696731 ttttttgtgtctttatctctccaaatgatagaaatggagagacacataaatg 28696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 2720414 - 2720376
Alignment:
Q  38 ggatcctaccactaagtgagtcccactatcattaattat 76  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  2720414 ggatcctaccactaagtgggtcccaccatcattaattat 2720376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Complemental strand, 9961297 - 9961216
Alignment:
Q  361 gaggaatgacatgtgaacaattaaattgtacaaccaacaaattacttgctatttttaataatattttgtttgatttcgattt 442  Q
    ||||||||| |||||||||  |   ||||||||||||||| ||| ||||||||||| |  || ||||| |||||||||||||    
T  9961297 gaggaatgatatgtgaacatctcgtttgtacaaccaacaacttatttgctattttttaatattttttgattgatttcgattt 9961216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 31708283 - 31708344
Alignment:
Q  94 attttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||| ||||||| ||||||| |||||   ||||||||||||| |||||||| |||||||||    
T  31708283 attttgtgtgtctatatctcttcaaatgatagaaatggagaaaaacataaataaagaggatc 31708344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 7545693 - 7545645
Alignment:
Q  23 caaaaaataaatggtggatcctaccactaagtgagtcccactatcatta 71  Q
    |||||||||| |||||| ||||| |||||||||  ||||||||||||||    
T  7545693 caaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 208122 - 207980
Alignment:
Q  20 acacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaa 119  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||  ||||||||||||||||||        |||||||||||||||||||||||||||||    
T  208122 acacaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattatattttactttttttaagattttatgtgtctttatctctccaaa 208023  T
Q  120 ttgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  208022 ttgaagaaatggagaaacacataaatggagaggatcctaaccc 207980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 16409 - 16555
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||||||||||||       |||||||||||||   ||||||||||    
T  16409 atagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattatattttatttttttcaagattttatgtaattttatctctc 16508  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  16509 caaattgaagaaatggagaaacacataaattgagaggatcctaaccc 16555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 7210 - 7064
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| ||||||| |||||| | |||||| || |||| ||||||||||||||||||       ||||||||||| |||||||||||||     
T  7210 atagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattatattttatttttttcaagattttatatgtctttatctctg 7111  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  7110 caaattgaagaaatgaagaaacacataaatggagaggatcctaaccc 7064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 22454 - 22593
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    |||||||||||||||| || ||||||||||||||||||||||| |||| || |||||||||||||||       ||||||||||||||| ||||||||||    
T  22454 atagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaattatattttacttttttcaagattttatgtgtatttatctctc 22553  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
     ||||  |||||||||||| | ||||||||| ||| ||||    
T  22554 taaatgtaagaaatggagatagacataaatggagaagatc 22593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 162
Target Start/End: Original strand, 73901 - 73998
Alignment:
Q  65 atcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||||||||||||||       ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||    
T  73901 atcattaattatattttatttttttcaagattttatgtgtttttatctctctaaattgaagaaatggagaaacacataaatggagagcatcctgaccc 73998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 6449 - 6585
Alignment:
Q  18 agacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctcca 117  Q
    |||||||||||||| ||||||| |||||| ||||| || || | || ||||||||||||||||||       |||||||||||||||||||||||||| |    
T  6449 agacacaaaaaatagatggtgggtcctacaactaaatgggtacaaccatcattaattatattttactttttccaagattttatgtgtctttatctctcaa 6548  T
Q  118 aattgaagaaatggagaaacacataaatgaagaggatcctaaccc 162  Q
    ||||||        ||||||||||||||| |||||||||||||||    
T  6549 aattga--------agaaacacataaatggagaggatcctaaccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 13718 - 13641
Alignment:
Q  57 gtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctccaaattgaagaaatggaga 134  Q
    ||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||    
T  13718 gtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaagaaatggaga 13641  T

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Target: scaffold0008 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 9213 - 9349
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatattttannnnnnncaagattttatgtgtctttatctctc 115  Q
    ||||||||| |||||| ||||||| ||| |||||||||||  | |||| ||||||||||||||| |         ||||||| ||||| |||||||||||    
T  9213 atagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaattatattattttttt---aagatttcatgtgcctttatctctc 9309  T
Q  116 caaattgaagaaatggagaaacacataaatgaagaggatc 155  Q
    ||||| |||||||| |||||||||||||||| ||||||||    
T  9310 caaatggaagaaattgagaaacacataaatggagaggatc 9349  T

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Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 17318 - 17384
Alignment:
Q  16 atagacacaaaaaataaatggtggatcctaccactaagtgagtcccactatcattaattatatttta 82  Q
    ||||||||||||||||| || ||| ||||| ||||||||| ||||||| |||||||||||| |||||    
T  17318 atagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattatttttta 17384  T

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Target: scaffold0468 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 5587 - 5531
Alignment:
Q  102 tgtctttatctctccaaattgaagaaatggagaaacacataaatgaagaggatccta 158  Q
    ||||||||||||||||||| ||||||||| |||    |||||||| |||||||||||    
T  5587 tgtctttatctctccaaatggaagaaatgaagaggatcataaatggagaggatccta 5531  T

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