View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3982_low_2 (Length: 365)
Name: NF3982_low_2
Description: NF3982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3982_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 29 - 354
Target Start/End: Original strand, 10100327 - 10100652
Alignment:
| Q |
29 |
ataataatgcattcatgagtaatgatctattatcgtatgtaaacatctactattgttcattcttcatattgcttttacaatatttgcttttttc-taatc |
127 |
Q |
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| T |
10100327 |
ataataatgcattcatgagtaatgatccattatcgtatgtaaacatctactattgttcattcttcatattgcttttacaatatttgttttttttataatc |
10100426 |
T |
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| Q |
128 |
taaaatccactgatgtattaactcttttgcttaaaggaaaaccacccttcagcattggaaaattttgaaaaagtgatgaacattgcaagagagaaaaaga |
227 |
Q |
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| T |
10100427 |
taaaatccactgatgtattaactcttttgcttaaaggaaaaccatccttctgcattggaaaattttgaaaaagtgatgaacattgcaagagagaaaaaga |
10100526 |
T |
|
| Q |
228 |
ttgttgtgttcttagattatgatggaacactctctcaaattgtcgatgatcctgataaagcttacatgactgatgctgtaagtactttgcaaataaaata |
327 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
10100527 |
ttgttgtgttcttagattatgatggaacactctctcaaattgtcgatgatcctgataaagcttacatgactgatgctgtaagtactttgcaaat-aaata |
10100625 |
T |
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| Q |
328 |
ttagtgattttgtgatatctaagtatt |
354 |
Q |
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||||||||||||||||||||||||||| |
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| T |
10100626 |
ttagtgattttgtgatatctaagtatt |
10100652 |
T |
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