View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3983_high_16 (Length: 215)
Name: NF3983_high_16
Description: NF3983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3983_high_16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 13452028 - 13452242
Alignment:
| Q |
1 |
gcccgccatcagaccgggcagcactcttagccttcaaatctgccctaacagagcccaaccttggcatcttcaactcatggtcaggctacgactgttgccg |
100 |
Q |
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| T |
13452028 |
gcccgccatcagaccgggcagcactcttagccttcaaatctgccctaacagagcccaaccttggcatcttcaactcatggtcaggctacgactgttgccg |
13452127 |
T |
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| Q |
101 |
tggctggcacggcgtcagttgcaaccccaccacctggcgtgttactgacattaacctccgcggcgactccgaagacccaatctttcaaaacctcactcac |
200 |
Q |
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| T |
13452128 |
tggctggcacggcgtcagttgcaaccccaccacctggcgcgttactgacattaacctccgcggcgactccgaagacccaatctttcaaaacctcactcac |
13452227 |
T |
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| Q |
201 |
tccggtgacatgacc |
215 |
Q |
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||||||||||||||| |
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| T |
13452228 |
tccggtgacatgacc |
13452242 |
T |
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