View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3983_low_1 (Length: 676)

Name: NF3983_low_1
Description: NF3983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3983_low_1
NF3983_low_1
[»] chr5 (39 HSPs)
chr5 (10-611)||(40542576-40543178)
chr5 (607-662)||(832171-832226)
chr5 (607-662)||(19650699-19650754)
chr5 (189-323)||(32550723-32550857)
chr5 (607-662)||(8786734-8786789)
chr5 (607-662)||(19128625-19128680)
chr5 (608-662)||(834226-834280)
chr5 (607-645)||(40543820-40543858)
chr5 (605-658)||(12659373-12659426)
chr5 (607-662)||(1611539-1611594)
chr5 (607-662)||(16312974-16313029)
chr5 (607-662)||(28003233-28003288)
chr5 (607-662)||(28766288-28766343)
chr5 (607-662)||(28867610-28867665)
chr5 (607-662)||(36226456-36226511)
chr5 (609-662)||(8943335-8943388)
chr5 (605-662)||(17916110-17916167)
chr5 (10-59)||(32551028-32551077)
chr5 (607-656)||(43007814-43007863)
chr5 (457-529)||(5020700-5020772)
chr5 (607-662)||(8990338-8990396)
chr5 (610-662)||(18526927-18526979)
chr5 (607-662)||(1093802-1093857)
chr5 (607-662)||(17210555-17210610)
chr5 (139-346)||(22122184-22122391)
chr5 (607-662)||(22702273-22702328)
chr5 (607-662)||(26269395-26269450)
chr5 (607-662)||(38697026-38697081)
chr5 (607-662)||(42516179-42516234)
chr5 (607-661)||(40716217-40716271)
chr5 (617-662)||(6061981-6062025)
chr5 (625-662)||(23206843-23206880)
chr5 (617-662)||(25754591-25754636)
chr5 (617-662)||(25793678-25793723)
chr5 (456-529)||(34371055-34371128)
chr5 (607-648)||(36337364-36337405)
chr5 (617-662)||(39850834-39850879)
chr5 (617-662)||(42097487-42097532)
chr5 (614-662)||(42918981-42919029)
[»] chr4 (33 HSPs)
chr4 (99-550)||(7781602-7782053)
chr4 (195-529)||(10997817-10998154)
chr4 (139-529)||(5598357-5598750)
chr4 (607-662)||(6196632-6196687)
chr4 (607-662)||(20702344-20702399)
chr4 (607-662)||(20702515-20702570)
chr4 (607-662)||(36962991-36963046)
chr4 (611-662)||(41169161-41169212)
chr4 (607-662)||(44470270-44470325)
chr4 (607-661)||(13204202-13204256)
chr4 (608-662)||(47931370-47931424)
chr4 (607-662)||(2358629-2358684)
chr4 (607-662)||(22852461-22852516)
chr4 (607-662)||(29097584-29097639)
chr4 (607-662)||(51400149-51400204)
chr4 (607-661)||(9779208-9779262)
chr4 (607-656)||(8897455-8897504)
chr4 (617-662)||(49574880-49574925)
chr4 (607-659)||(46196749-46196801)
chr4 (608-659)||(5662097-5662148)
chr4 (139-346)||(7626329-7626536)
chr4 (607-662)||(24427165-24427220)
chr4 (607-662)||(35447690-35447745)
chr4 (607-661)||(35104106-35104160)
chr4 (607-661)||(50412921-50412975)
chr4 (607-659)||(1580051-1580104)
chr4 (607-660)||(23432198-23432250)
chr4 (617-662)||(26878646-26878691)
chr4 (625-662)||(52954097-52954134)
chr4 (607-651)||(143478-143522)
chr4 (608-659)||(35034844-35034898)
chr4 (607-651)||(44182291-44182335)
chr4 (617-661)||(46251255-46251299)
[»] chr3 (39 HSPs)
chr3 (65-537)||(23449955-23450427)
chr3 (607-659)||(5492516-5492568)
chr3 (607-662)||(19420174-19420229)
chr3 (607-662)||(30102569-30102624)
chr3 (609-662)||(5812129-5812183)
chr3 (607-661)||(7430033-7430087)
chr3 (608-660)||(35938805-35938857)
chr3 (607-658)||(796436-796487)
chr3 (607-662)||(14899876-14899931)
chr3 (607-662)||(21824451-21824506)
chr3 (607-662)||(22102408-22102463)
chr3 (607-662)||(22177356-22177411)
chr3 (611-662)||(28391328-28391379)
chr3 (607-662)||(45644109-45644164)
chr3 (607-662)||(50098998-50099052)
chr3 (607-661)||(3418780-3418834)
chr3 (610-656)||(13155482-13155528)
chr3 (617-662)||(5907343-5907388)
chr3 (607-656)||(12565527-12565576)
chr3 (607-656)||(13259926-13259975)
chr3 (625-662)||(21078351-21078388)
chr3 (614-662)||(17586905-17586953)
chr3 (607-659)||(25842328-25842380)
chr3 (607-658)||(3266921-3266972)
chr3 (608-659)||(17476353-17476404)
chr3 (623-662)||(28370432-28370471)
chr3 (623-662)||(28378254-28378293)
chr3 (623-662)||(28386072-28386111)
chr3 (607-662)||(40360312-40360367)
chr3 (607-661)||(3890226-3890280)
chr3 (607-661)||(17395167-17395221)
chr3 (607-657)||(32509238-32509288)
chr3 (607-661)||(52957624-52957678)
chr3 (625-662)||(21030607-21030644)
chr3 (607-656)||(49429706-49429755)
chr3 (607-659)||(26977978-26978030)
chr3 (618-662)||(39822633-39822677)
chr3 (618-662)||(45885796-45885840)
chr3 (617-661)||(49758431-49758475)
[»] chr2 (21 HSPs)
chr2 (65-537)||(6659745-6660217)
chr2 (139-524)||(44325842-44326230)
chr2 (607-662)||(5880788-5880843)
chr2 (607-662)||(33676755-33676810)
chr2 (608-662)||(15265559-15265613)
chr2 (608-662)||(34063213-34063267)
chr2 (609-658)||(7603697-7603746)
chr2 (609-658)||(37609971-37610020)
chr2 (607-662)||(629604-629659)
chr2 (607-662)||(7537283-7537338)
chr2 (607-662)||(12069432-12069487)
chr2 (607-662)||(35125971-35126026)
chr2 (607-662)||(41122659-41122714)
chr2 (607-662)||(42651839-42651894)
chr2 (618-659)||(12413128-12413169)
chr2 (618-659)||(12425188-12425229)
chr2 (618-659)||(13594292-13594333)
chr2 (607-651)||(27913058-27913102)
chr2 (607-662)||(36080213-36080271)
chr2 (607-651)||(41384539-41384583)
chr2 (626-662)||(44020068-44020104)
[»] chr7 (21 HSPs)
chr7 (137-332)||(6052493-6052688)
chr7 (607-662)||(48624812-48624867)
chr7 (607-662)||(19371713-19371768)
chr7 (607-662)||(21305497-21305552)
chr7 (605-651)||(29366183-29366229)
chr7 (607-661)||(48110302-48110356)
chr7 (617-662)||(39151789-39151834)
chr7 (607-659)||(45000975-45001027)
chr7 (607-662)||(2275668-2275723)
chr7 (607-658)||(23050855-23050906)
chr7 (608-659)||(25610617-25610668)
chr7 (607-662)||(31283506-31283561)
chr7 (607-662)||(36609865-36609920)
chr7 (610-657)||(39779062-39779109)
chr7 (607-662)||(47901759-47901813)
chr7 (617-662)||(7525810-7525855)
chr7 (607-660)||(10040398-10040451)
chr7 (625-662)||(21093642-21093679)
chr7 (607-659)||(372630-372682)
chr7 (607-659)||(7628674-7628726)
chr7 (618-658)||(48103799-48103839)
[»] chr1 (36 HSPs)
chr1 (139-529)||(7430392-7430785)
chr1 (139-529)||(14606308-14606701)
chr1 (607-662)||(13303931-13303986)
chr1 (607-662)||(48419977-48420032)
chr1 (607-662)||(25298041-25298096)
chr1 (607-662)||(47576735-47576790)
chr1 (606-662)||(46022372-46022428)
chr1 (607-662)||(11344927-11344982)
chr1 (607-662)||(23929009-23929064)
chr1 (607-662)||(31528623-31528678)
chr1 (607-662)||(35673704-35673759)
chr1 (607-662)||(43575672-43575727)
chr1 (608-659)||(48715901-48715952)
chr1 (607-662)||(52043366-52043421)
chr1 (607-661)||(13315248-13315302)
chr1 (607-665)||(29716902-29716960)
chr1 (609-662)||(7548424-7548477)
chr1 (617-662)||(12267063-12267108)
chr1 (624-661)||(40403416-40403453)
chr1 (607-659)||(18227009-18227061)
chr1 (607-662)||(115907-115962)
chr1 (607-662)||(8574004-8574059)
chr1 (607-662)||(12301004-12301059)
chr1 (607-662)||(13057266-13057321)
chr1 (607-662)||(13315119-13315174)
chr1 (607-662)||(33326795-33326850)
chr1 (607-662)||(49368279-49368334)
chr1 (607-661)||(650354-650408)
chr1 (608-662)||(16424473-16424527)
chr1 (607-665)||(29689390-29689448)
chr1 (607-661)||(48419614-48419668)
chr1 (607-661)||(48995468-48995522)
chr1 (609-662)||(14258700-14258753)
chr1 (617-662)||(20906764-20906809)
chr1 (607-656)||(22094005-22094054)
chr1 (607-655)||(9306305-9306353)
[»] chr6 (18 HSPs)
chr6 (139-524)||(22015734-22016122)
chr6 (607-662)||(6001404-6001459)
chr6 (607-662)||(10460114-10460169)
chr6 (607-662)||(14965223-14965278)
chr6 (610-662)||(31861836-31861888)
chr6 (607-662)||(28592543-28592598)
chr6 (607-662)||(28712013-28712068)
chr6 (614-660)||(7451744-7451790)
chr6 (607-661)||(10343424-10343478)
chr6 (607-661)||(34210093-34210147)
chr6 (617-662)||(32531123-32531168)
chr6 (607-662)||(17353095-17353149)
chr6 (607-662)||(22535090-22535145)
chr6 (617-662)||(12169917-12169962)
chr6 (609-662)||(26252978-26253031)
chr6 (607-651)||(4997014-4997058)
chr6 (607-663)||(11646491-11646547)
chr6 (610-662)||(17942739-17942791)
[»] scaffold0029 (1 HSPs)
scaffold0029 (155-529)||(52815-53192)
[»] chr8 (27 HSPs)
chr8 (607-662)||(29684223-29684278)
chr8 (609-662)||(15872092-15872145)
chr8 (607-662)||(3739567-3739622)
chr8 (607-662)||(25722787-25722842)
chr8 (607-662)||(1554761-1554816)
chr8 (607-662)||(10865184-10865239)
chr8 (607-658)||(24688616-24688667)
chr8 (607-662)||(27020522-27020577)
chr8 (607-662)||(38498488-38498543)
chr8 (607-662)||(45440648-45440703)
chr8 (607-661)||(38804602-38804656)
chr8 (609-662)||(15898759-15898812)
chr8 (607-658)||(4437867-4437918)
chr8 (607-662)||(15919576-15919631)
chr8 (607-659)||(18918349-18918403)
chr8 (607-658)||(28969647-28969698)
chr8 (607-662)||(34966688-34966743)
chr8 (607-662)||(41942510-41942565)
chr8 (607-662)||(45356494-45356548)
chr8 (607-661)||(6165917-6165971)
chr8 (607-661)||(18279393-18279447)
chr8 (617-662)||(444292-444337)
chr8 (617-662)||(26784650-26784695)
chr8 (617-662)||(32856642-32856687)
chr8 (607-662)||(2692067-2692123)
chr8 (607-659)||(3369511-3369563)
chr8 (607-655)||(43922205-43922253)
[»] scaffold0445 (1 HSPs)
scaffold0445 (607-662)||(4819-4874)
[»] scaffold0583 (1 HSPs)
scaffold0583 (618-660)||(1072-1114)
[»] scaffold0002 (1 HSPs)
scaffold0002 (610-656)||(151460-151506)
[»] scaffold0196 (1 HSPs)
scaffold0196 (610-659)||(8733-8782)
[»] scaffold0013 (1 HSPs)
scaffold0013 (607-659)||(41577-41630)
[»] scaffold0285 (1 HSPs)
scaffold0285 (625-661)||(16654-16690)


Alignment Details
Target: chr5 (Bit Score: 535; Significance: 0; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 10 - 611
Target Start/End: Original strand, 40542576 - 40543178
Alignment:
Q  10 acatcatcaagggtccaacttcaatcttcatcgtcgctctccacctcctcgtcgtcttcgcc-ataaattggaaaagggtctacattgacatccggaatt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  40542576 acatcatcaagggtccaacttcaatcttcatcgtcgctctccacctcctcgtcgtcttcgcccataaattggaaaagggtctacattgacatccgaaatt 40542675  T
Q  109 ggtcgttgctgacttgaactcccaacctcatgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacgg 208  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40542676 ggtggttgctgacttgaactcccaacctcacgtgcttgcctaaactgagtcagttgctcctcatattttcgttgtcggctaagcaaatcttgcacaacgg 40542775  T
Q  209 cctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttc 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||    
T  40542776 cctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataaggtcacacatttcagaggtcagtgcaggctgttggaaggatccttc 40542875  T
Q  309 accatgattaagggtaagtctgagagttgctgcaacacccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaaca 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  40542876 accatgattaagggtaagtctgagagttgctgcaacacccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcgcca 40542975  T
Q  409 acaactttggtccaagtttagagggccaaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatg 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||||||||    
T  40542976 acaactttggtccaagtttagagggccaaactatgatcaatagataacccttgagaaagagcctcaacaaactatcaatcatactcctcctattcaaatg 40543075  T
Q  509 ataacaaaatagttaatgacaaataacaatcactttttaaaatgtgtagtgacatatacttcttctaaatttagaatgaaaaacattcacatcatataat 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  40543076 ataacaaaatagttaatgacaaataacaatcactttttaaaatgtgtagtgacaaatacttctcctaaatttagaatgaaaaacattcacatcatataat 40543175  T
Q  609 tat 611  Q
    |||    
T  40543176 tat 40543178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 832171 - 832226
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  832171 attatcccaattatacctttaaacaactttttctataataaagattgttgttggtg 832226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 19650699 - 19650754
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  19650699 attatcccaattatacctttaaacaactttttctataataaagattgttgttggtg 19650754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 189 - 323
Target Start/End: Complemental strand, 32550857 - 32550723
Alignment:
Q  189 aagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgca 288  Q
    |||||| | ||||| || |||||| |||||||||||||||||| ||||||||||||| |||||| ||||||| || || | ||| ||| |||| |   ||    
T  32550857 aagcaatttttgcataagggcctcctgactcgccatttgttgtatgagctgctcttgtgtcaatttttgaatcagctcgcgcatttcatgggtcatctca 32550758  T
Q  289 ggctgttggaaggatccttcaccatgattaagggt 323  Q
    ||||| ||  ||||||| ||||||||||| |||||    
T  32550757 ggctggtgtgaggatccctcaccatgattcagggt 32550723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 8786789 - 8786734
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || |||||||||||||||||||||| |||||||||||| ||||||||||    
T  8786789 attatctcaattatacctttaaacaactttttctataataaagattgttgttggtg 8786734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 19128680 - 19128625
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  19128680 attattccaattatacccttaaacaactttttctataataaagatcgttgttggtg 19128625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 662
Target Start/End: Complemental strand, 834280 - 834226
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  834280 ttatcccaattatacccttaaacaactttttctataataaagattgttgttggtg 834226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 645
Target Start/End: Complemental strand, 40543858 - 40543820
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataat 645  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40543858 attatcccagttatacctttaaacaactttttgtataat 40543820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 605 - 658
Target Start/End: Complemental strand, 12659426 - 12659373
Alignment:
Q  605 taattatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  12659426 taattatcccaattatacccttaaacaactttttttataataaagattgttgtt 12659373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 1611539 - 1611594
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||||||||||||||||||  ||| ||||||| ||||||||||    
T  1611539 attatcccaattatacctttaaacaactttttccatattaaagattgttgttggtg 1611594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 16312974 - 16313029
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||||||||| |||||||||||||| || |||||||||  |||||||||    
T  16312974 attatcccagttatacccttaaacaactttttctacaataaagattattgttggtg 16313029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 28003233 - 28003288
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||||||||| | |||||||||||||||||||||    
T  28003233 attatcccaattatacgcttaaacaactttttatgtaataaagatcgttgttggtg 28003288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 28766288 - 28766343
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  28766288 attatcccagttatactcttaaacaattttttctataataaagattgttgttggtg 28766343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 28867665 - 28867610
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||||||| |||||    
T  28867665 attatctcaattatacccttaaacaactttttctataataaagatcgttgctggtg 28867610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 36226456 - 36226511
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  36226456 attatctcaattatacccttaaacaactttttctataataaagattgttgttggtg 36226511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 8943388 - 8943335
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||| ||||||||||    
T  8943388 tatcccaattatacccttaaacaactttttttataacaaagattgttgttggtg 8943335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 662
Target Start/End: Complemental strand, 17916167 - 17916110
Alignment:
Q  605 taattatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||| ||||||| ||||  |||||||| |||||||||||| ||||||||||    
T  17916167 taattatcccaattatacccttaagtaactttttatataataaagattgttgttggtg 17916110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 32551077 - 32551028
Alignment:
Q  10 acatcatcaagggtccaacttcaatcttcatcgtcgctctccacctcctc 59  Q
    |||||| || ||||||| |||||||| |||||||||||||||||||||||    
T  32551077 acatcaacaggggtccatcttcaatcctcatcgtcgctctccacctcctc 32551028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 43007863 - 43007814
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||    
T  43007863 attatcccaattatacccttaaacaactttttctataataaagattgttg 43007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 529
Target Start/End: Original strand, 5020700 - 5020772
Alignment:
Q  457 ccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    |||| ||||| || |||||||||| | | |||||||||||||| ||||||| ||||||||||| |||| ||||    
T  5020700 cctttagaaatagcctcagcaagcagccgatcatactcctcctgttcaaataataacaaaataattaaggaca 5020772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 8990338 - 8990396
Alignment:
Q  607 attatcccagttatacctttaaacaa---ctttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||||||||| ||||||||   |||||| |||||||||||| ||||||||||    
T  8990338 attatcccagttatacccttaaacaacagctttttctataataaagattgttgttggtg 8990396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 662
Target Start/End: Original strand, 18526927 - 18526979
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| ||||| | |||||||||||||| |||||||||||| ||||||||||    
T  18526927 atcccaattatatccttaaacaactttttctataataaagattgttgttggtg 18526979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 1093802 - 1093857
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||||||||| |||| ||||||| ||||||||||    
T  1093802 attatcccaattatactcttaaacaactttttatatactaaagattgttgttggtg 1093857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 17210555 - 17210610
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  17210555 attatctcaattatacccttaaacaattttttctataataaagattgttgttggtg 17210610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 346
Target Start/End: Original strand, 22122184 - 22122391
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    |||||||||||||| ||||  || |||||||||||   || |||  || | ||||||||||||||||| ||| | ||| ||||||| |  || | ||  |    
T  22122184 tgtgcttgcctaaattgagcgagctgctcctcataagatctttggcggttgagcaaatcttgcacaacagccgcttgagtcgccatctactgcgcgaatt 22122283  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| | |||||| |||||||| || | |||||| || || ||  |||||||  |  ||||||||||||||||||| || |||| | |||| ||||     
T  22122284 gctcttgtgccaatctatgaataagctcccgcatctctggcgtcagctcaggctgccgagaggatccttcaccatgattgagcgtaaatgtgagcgttga 22122383  T
Q  339 tgcaacac 346  Q
    ||||||||    
T  22122384 tgcaacac 22122391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 22702273 - 22702328
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||| |||||| ||||||||||    
T  22702273 attatctcaattatacccttaaacaactttttctataagaaagattgttgttggtg 22702328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 26269395 - 26269450
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| | |||||||||||| |||||||||||| ||||||||||    
T  26269395 attatctcaattataccctgaaacaactttttctataataaagatagttgttggtg 26269450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 38697081 - 38697026
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||| | |||||||| ||||| |||||||||||| ||||||||||    
T  38697081 attatcccaattatatccttaaacaattttttctataataaagattgttgttggtg 38697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 42516179 - 42516234
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||||||| || ||||||||||    
T  42516179 attatctcaattatacccttaaacaactttttctataataaaaattgttgttggtg 42516234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Original strand, 40716217 - 40716271
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||| |||||||| |||||  ||||||||||| |||||||||    
T  40716217 attatcccaattatacccttaaacaattttttcaataataaagattgttgttggt 40716271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 6061981 - 6062025
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||||||||||||| || ||||||||||    
T  6061981 ttatacccttaaacaactttttgtataataaa-attgttgttggtg 6062025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 662
Target Start/End: Original strand, 23206843 - 23206880
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  23206843 ttaaacaactttttttataataaagattgttgttggtg 23206880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 25754636 - 25754591
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||| |||||||| |||||||||||| ||||||||||    
T  25754636 ttatacccttaaataactttttctataataaagattgttgttggtg 25754591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 25793678 - 25793723
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| |||||| |||||||| |||||||||||| ||||||||||    
T  25793678 ttatacatttaaataactttttctataataaagattgttgttggtg 25793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 529
Target Start/End: Complemental strand, 34371128 - 34371055
Alignment:
Q  456 cccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    ||||| ||||| || |||||||||| | |  ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  34371128 cccttcagaaatagcctcagcaagcagccggtcatactcctcctgttcaaataataacaaaataattaaggaca 34371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 648
Target Start/End: Original strand, 36337364 - 36337405
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaa 648  Q
    ||||||||| ||||||| |||||||||||||| |||||||||    
T  36337364 attatcccaattatacccttaaacaactttttctataataaa 36337405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 39850834 - 39850879
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  39850834 ttatacccttaaacaaatttttctataataaagattgttgttggtg 39850879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 42097487 - 42097532
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| | ||||||||    
T  42097487 ttatacccttaaacaactttttctataataaagattgatgttggtg 42097532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 614 - 662
Target Start/End: Complemental strand, 42919029 - 42918981
Alignment:
Q  614 cagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||  ||| |||||||||| |||||||||||| ||||||||||    
T  42919029 cagttatactcttacacaactttttctataataaagattgttgttggtg 42918981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 99 - 550
Target Start/End: Original strand, 7781602 - 7782053
Alignment:
Q  99 atccggaattggtcgttgctgacttgaactcccaacctcatgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatct 198  Q
    |||||||| ||||  ||||||||||||||||||| |||||||||||| ||||||| ||| || ||||||||||||| |||||||  ||||||| ||||||    
T  7781602 atccggaactggtgcttgctgacttgaactcccatcctcatgtgctttcctaaaccgagccaattgctcctcatatgttcgttggcggctaagaaaatct 7781701  T
Q  199 tgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttgga 298  Q
    || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| |||     
T  7781702 tgtacaacggcctcgtgtctcgccatttgctgggtgagctgctcttgagtcaatctttgaataaggtcacgcatctcaggggtcagcgcaggctgctggg 7781801  T
Q  299 aggatccttcaccatgattaagggtaagtctgagagttgctgcaacacccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggt 398  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||||||| || |||||||  |||||||||||||||||||||  |||||||||||    
T  7781802 aggatccttcaccatgattaagggtaaatctgagggttgttgcaacacccttcaggtagttagcggccaagttaccggcaccatataattttcctttggt 7781901  T
Q  399 tttatcaacaacaactttggtccaagtttagagggccaaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcc 498  Q
    ||||||  || ||||||||||||| | || |||||||||||||||||||| || |||||||| ||||| || ||| ||||||||||  ||||| ||||||    
T  7781902 tttatcgccagcaactttggtccatggttggagggccaaactatgatcaacagttaaccctttagaaatagcctcggcaagctgtcggtcatattcctcc 7782001  T
Q  499 tattcaaatgataacaaaatagttaatgacaaataacaatcactttttaaaa 550  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  7782002 tattcaaatgataacaaaatagttaatgacaaataacaattattttttaaaa 7782053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 195 - 529
Target Start/End: Complemental strand, 10998154 - 10997817
Alignment:
Q  195 atcttgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgt 294  Q
    ||||||||||| |||  | ||||| ||||| || || |||| ||||||||| |||||||| |||| ||| || | |||||| || || ||  |||||||     
T  10998154 atcttgcacaagggctgcttgacttgccatctgctgcgtgaactgctcttgtgtcaatctatgaaaaagctcccgcatctctggcgtcagctcaggctgc 10998055  T
Q  295 tggaaggatccttcaccatgattaagggtaagtctgagagttgctgcaacac---ccttccggcagttagcaaccaagttaccggcaccatatagatttc 391  Q
    ||| ||| ||||||||| ||||| ||||| |||||||| |||| ||||||||   |||| ||| |||||||  | ||||||||   |||||| || ||||    
T  10998054 tgggaggttccttcaccctgattgagggttagtctgagggttgatgcaacactaccctttcggtagttagcggctaagttaccaagaccatagagctttc 10997955  T
Q  392 ctttggttttatcaacaacaactttggtccaagtttagagggccaaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcata 491  Q
    ||||  | || ||  || |||||||  ||||||| | || || ||||   ||||||||||   |||||||||||| || ||||||||| || | ||||||    
T  10997954 ctttcttcttgtcgccagcaacttttttccaagtgttgaaggtcaaagagtgatcaatagtagacccttgagaaatagcctcagcaagttgccgatcata 10997855  T
Q  492 ctcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    |||||||| ||||||| ||||||||||| |||| ||||    
T  10997854 ctcctcctgttcaaataataacaaaatatttaaggaca 10997817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 139 - 529
Target Start/End: Original strand, 5598357 - 5598750
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    |||||||||||||| ||||  || |||||||||||   || |||  || | ||||||||||||||||| ||| | ||| ||||||| || || | ||  |    
T  5598357 tgtgcttgcctaaattgagcgagctgctcctcataagatctttggcggttgagcaaatcttgcacaacagccgcttgagtcgccatctgctgcgcgaatt 5598456  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| | |||||| |||||||| || | |||||| || |||||  |||||||  || ||||||||||||||||||| || |||| | |||| ||||     
T  5598457 gctcttgtgccaatctatgaataagctcccgcatctctggcgttagctcaggctgccgggaggatccttcaccatgattgagcgtaaatgtgagtgttga 5598556  T
Q  339 tgcaac---acccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggcc 435  Q
    ||||||   ||||  |||  |||||||  ||||||||||   |||||| || ||||||||  | || ||  ||||||||||  ||||||| | || || |    
T  5598557 tgcaacactacccgcccgatagttagcggccaagttaccaagaccatagagctttcctttcttcttgtcgccaacaacttttttccaagtgtggaaggtc 5598656  T
Q  436 aaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    |||   ||| ||| || | |||||| ||||| || |||||||||  | |  ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  5598657 aaagagtgaccaacagttgacccttcagaaatagcctcagcaagtagccggtcatactcctcctgttcaaataataacaaaataattaaggaca 5598750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 6196632 - 6196687
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  6196632 attattccaattatacccttaaacaactttttgtataataaagattgttgttggtg 6196687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 20702344 - 20702399
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  20702344 attattccaattatacccttaaacaactttttctataataaagatcgttgttggtg 20702399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 20702515 - 20702570
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  20702515 attattccaattatacccttaaacaactttttctataataaagatcgttgttggtg 20702570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 36963046 - 36962991
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||||| ||||||    
T  36963046 attatcccaattatacatttaaacaactttttgtataataatgatcgttattggtg 36962991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 611 - 662
Target Start/End: Original strand, 41169161 - 41169212
Alignment:
Q  611 tcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  41169161 tcccagttatacccttaaacaactttttctataataaagattgttgttggtg 41169212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 44470270 - 44470325
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  44470270 attatcccaattatacccttaaacaactttttctataataaagattgttgttggtg 44470325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 13204256 - 13204202
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||||||||||||    
T  13204256 attatctcaattatacccttaaacaactttttttataataaagatcgttgttggt 13204202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 662
Target Start/End: Complemental strand, 47931424 - 47931370
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  47931424 ttatcccaattatacccttaaacaactttttatataataaagattgttgttggtg 47931370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 2358629 - 2358684
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| || ||||||||||    
T  2358629 attatcccaattatacccttaaacaactttttctataataaaaattgttgttggtg 2358684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 22852461 - 22852516
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||| |||| || ||||||||||||||||||| |||||||||||| ||||||||||    
T  22852461 attaccccaattgtacctttaaacaactttttctataataaagattgttgttggtg 22852516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 29097584 - 29097639
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||| | |||||||||||||| |||||||||||| ||||||||||    
T  29097584 attatcccaattatagccttaaacaactttttctataataaagattgttgttggtg 29097639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 51400204 - 51400149
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||||||    
T  51400204 attatcccaattataccattaaataactttttctataataaagattgttgttggtg 51400149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 9779262 - 9779208
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||| |||||||||    
T  9779262 attatcccaattatacccttaaacaattttttatataataaagatggttgttggt 9779208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 8897504 - 8897455
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    ||||||| | |||||||||||||||||||||| ||||||||| |||||||    
T  8897504 attatcctaattatacctttaaacaactttttctataataaaaatcgttg 8897455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 49574880 - 49574925
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||    
T  49574880 ttatatctttaaacaaatttttctataataaagatcgttgttggtg 49574925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 659
Target Start/End: Original strand, 46196749 - 46196801
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||||| |||| |||||||||||||| || |||||||||||| |||||||    
T  46196749 attatcccaattatgcctttaaacaacttattctataataaagattgttgttg 46196801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Original strand, 5662097 - 5662148
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||||| ||||||||||||| || ||||| |||||||||||| |||||||    
T  5662097 ttatcccaattatacctttaaataattttttatataataaagattgttgttg 5662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 346
Target Start/End: Complemental strand, 7626536 - 7626329
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    |||||||||||||| ||||  || |||||||||||   || |||  || | ||||||||||||||||| ||| | ||| ||||||| || || | ||  |    
T  7626536 tgtgcttgcctaaattgagcgagctgctcctcataagatctttggcggttgagcaaatcttgcacaacagccgcttgagtcgccatctgctgcgcgaatt 7626437  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| | |||||| |  ||||| || | |||||| || || ||  |||||||| || ||||||||||||||||||| || |||| | |||| ||||     
T  7626436 gctcttgtgccaatctatttataagctcccgcatctctggcgtcagctcaggctgtcgggaggatccttcaccatgattgagcgtaaatgtgagcgttga 7626337  T
Q  339 tgcaacac 346  Q
    | ||||||    
T  7626336 ttcaacac 7626329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 24427165 - 24427220
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||||||||| |||| ||||||| ||||||||||    
T  24427165 attatcccaattatactcttaaacaactttttctatactaaagattgttgttggtg 24427220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 35447745 - 35447690
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| ||||| |||||||| |||||||||||| ||||||||||    
T  35447745 attatctcaattatacccttaaataactttttctataataaagattgttgttggtg 35447690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 35104160 - 35104106
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||| ||||||| || ||||||||||| ||||||||||||| ||||||||    
T  35104160 attattccaattatacccttcaacaactttttctataataaagatcattgttggt 35104106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Original strand, 50412921 - 50412975
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||| ||||||||| |||| |||||||||||| | |||||||    
T  50412921 attatcccaattatacccttaaacaaccttttatataataaagattgatgttggt 50412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 1580104 - 1580051
Alignment:
Q  607 attatcccagttatacctttaaac-aactttttgtataataaagatcgttgttg 659  Q
    ||||||||| |||||||||||||  |||||||| |||||||||||| |||||||    
T  1580104 attatcccaattatacctttaaaataactttttctataataaagattgttgttg 1580051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 23432250 - 23432198
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttgg 660  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| ||||||||    
T  23432250 attatcccaattatactcttaaacaactttttctataataaagat-gttgttgg 23432198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 26878691 - 26878646
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| |||||||||||||||| ||||| |||||| ||||||||||    
T  26878691 ttatatctttaaacaactttttttataacaaagattgttgttggtg 26878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 662
Target Start/End: Original strand, 52954097 - 52954134
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  52954097 ttaaacaactttttctataataaagattgttgttggtg 52954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 651
Target Start/End: Complemental strand, 143522 - 143478
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    ||||||||| |||||||||||||||||||||| || | |||||||    
T  143522 attatcccaattatacctttaaacaactttttatacagtaaagat 143478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 608 - 659
Target Start/End: Complemental strand, 35034898 - 35034844
Alignment:
Q  608 ttatcccagttatacctttaaacaac---tttttgtataataaagatcgttgttg 659  Q
    |||||||||||||||| |||||||||   ||||| |||||||||||| |||||||    
T  35034898 ttatcccagttatacccttaaacaacaactttttttataataaagattgttgttg 35034844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 651
Target Start/End: Complemental strand, 44182335 - 44182291
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||    
T  44182335 attatcccagttatatccttaaacaattttttctataataaagat 44182291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 617 - 661
Target Start/End: Original strand, 46251255 - 46251299
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||| |||||||||||||| |||||||||||| ||| |||||    
T  46251255 ttataccgttaaacaactttttctataataaagattgttcttggt 46251299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 65 - 537
Target Start/End: Complemental strand, 23450427 - 23449955
Alignment:
Q  65 cttcgccataaattggaaaagggtctacattgacatccggaattggtcgttgctgacttgaactcccaacctcatgtgcttgcctaaactgagtcagttg 164  Q
    |||||||||||||||||||||| |||||||||  ||| |||| ||    ||||||||||||| ||||| ||||||||||||||| ||| |||| ||||||    
T  23450427 cttcgccataaattggaaaaggctctacattgggatctggaactgacgcttgctgacttgaattcccatcctcatgtgcttgccgaaattgagccagttg 23450328  T
Q  165 ctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataagg 264  Q
    |||||||||| |||||||  |||||||||||||||| ||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||    
T  23450327 ctcctcatatgttcgttggcggctaagcaaatcttgtacaacggcctcatgtctcgccatttgctgggtgagctgctcttgagtcaatctttgaataagg 23450228  T
Q  265 tcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgctgcaacacccttccggcagttagcaa 364  Q
    |||  |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||| |||||| |||| |||||||||||||||| |||||||      
T  23450227 tcatgcatctcaggggtcagtgcaggctgctgggaggatccttcgccatgattaagggtaaatctgagggttgttgcaacacccttccggtagttagcgg 23450128  T
Q  365 ccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggccaaactatgatcaatagataacccttgaga 464  Q
     ||||||||||||||||||||  |||||||||||||||||  || |||||||||||||| ||| |||||||||||||||||||| || |||||||| |||    
T  23450127 tcaagttaccggcaccatataattttcctttggttttatcgccagcaactttggtccaaatttggagggccaaactatgatcaacagttaaccctttaga 23450028  T
Q  465 aagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgacaaataacaa 537  Q
    ||||| ||| ||||| ||||  ||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  23450027 aagagcctcggcaagttgtcggtcatattcctcctattcaaatgataacagaatagttaatgacaactaacaa 23449955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 5492568 - 5492516
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| |||||||    
T  5492568 attatcccaattatacctttaaacaactttttctataataaagattgttgttg 5492516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 19420229 - 19420174
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  19420229 attatcccaattatacccttaaacaactttttctataataaagattgttgttggtg 19420174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 30102624 - 30102569
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||||||||||||||    
T  30102624 attatctcaattatacccttaaacaactttttctataataaagatcgttgttggtg 30102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 5812183 - 5812129
Alignment:
Q  609 tatcccagttatacct-ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||    
T  5812183 tatcccaattatacctcttaaacaactttttctataataaagatcgttgttggtg 5812129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 7430087 - 7430033
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||| |||||    
T  7430087 attatcccaattataccattaaacaactttttctataataaagatcgttattggt 7430033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 35938805 - 35938857
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttgg 660  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||||||    
T  35938805 ttatcccaattatacccttaaacaactttttatataataaagattgttgttgg 35938857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 658
Target Start/End: Original strand, 796436 - 796487
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||| ||||||    
T  796436 attatcccaattatacctttaaataactttttatataataaagattgttgtt 796487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 14899876 - 14899931
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  14899876 attatctcaattatacccttaaacaactttttatataataaagattgttgttggtg 14899931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 21824506 - 21824451
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||| |||||||||    
T  21824506 attatctcaattatacccttaaacaactttttctataataaagatcattgttggtg 21824451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 22102408 - 22102463
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  22102408 attatcccaattatacccttaaacaactttttccataataaagattgttgttggtg 22102463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 22177356 - 22177411
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| ||||||||||||||  ||||||||||| ||||||||||    
T  22177356 attatcccaattatacccttaaacaactttttccataataaagattgttgttggtg 22177411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 611 - 662
Target Start/End: Original strand, 28391328 - 28391379
Alignment:
Q  611 tcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  28391328 tcccaattatatctttaaacaactttttctataataaagattgttgttggtg 28391379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 45644109 - 45644164
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| || |||||||    
T  45644109 attatcccaattatacccttaaacaactttttctataataaagattgtcgttggtg 45644164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 50098998 - 50099052
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  50098998 attatcccaattatacctt-aaacaactttttctataataaagattgttgttggtg 50099052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Original strand, 3418780 - 3418834
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||| |||||||||    
T  3418780 attattccaattatacccttaaacaactttttctataataaagattgttgttggt 3418834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 610 - 656
Target Start/End: Complemental strand, 13155528 - 13155482
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||    
T  13155528 atcccaattatacctttaaacaactttttctataataaagattgttg 13155482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 5907388 - 5907343
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  5907388 ttatacccttaaacaactttttatataataaagattgttgttggtg 5907343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 12565576 - 12565527
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||| ||||    
T  12565576 attattccaattatacctttaaacaactttttctataataaagattgttg 12565527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 13259975 - 13259926
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||| ||||    
T  13259975 attattccaattatacctttaaacaactttttctataataaagattgttg 13259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 662
Target Start/End: Complemental strand, 21078388 - 21078351
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21078388 ttaaacaactttttctataataaagatcgttgttggtg 21078351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 614 - 662
Target Start/End: Complemental strand, 17586953 - 17586905
Alignment:
Q  614 cagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||| |||||||||||  |||||||||||| ||||||||||    
T  17586953 cagttataccttcaaacaacttttcttataataaagattgttgttggtg 17586905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 659
Target Start/End: Original strand, 25842328 - 25842380
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||||| ||||||| ||||| ||| |||| ||||||||||||||||||||    
T  25842328 attatcccaattatacccttaaataaccttttatataataaagatcgttgttg 25842380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 3266972 - 3266921
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||| ||||||    
T  3266972 attattccaattatacccttaaacaactttttctataataaagattgttgtt 3266921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Original strand, 17476353 - 17476404
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||||| ||||||  |||||||||||||| |||||||||||| |||||||    
T  17476353 ttatcccaattatacgcttaaacaactttttatataataaagattgttgttg 17476404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 662
Target Start/End: Original strand, 28370432 - 28370471
Alignment:
Q  623 ctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  28370432 ctttaaacaactttttctataataaagattgttgttggtg 28370471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 662
Target Start/End: Original strand, 28378254 - 28378293
Alignment:
Q  623 ctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  28378254 ctttaaacaactttttctataataaagattgttgttggtg 28378293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 662
Target Start/End: Original strand, 28386072 - 28386111
Alignment:
Q  623 ctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  28386072 ctttaaacaactttttctataataaagattgttgttggtg 28386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 40360312 - 40360367
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||||| | |||||||| ||||| |||||||||||| ||||||||||    
T  40360312 attatccaagttatatccttaaacaattttttctataataaagattgttgttggtg 40360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 3890280 - 3890226
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    |||||| || ||||||| |||||||||||||| || ||||||||| |||||||||    
T  3890280 attatctcaattatacccttaaacaactttttctacaataaagattgttgttggt 3890226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Original strand, 17395167 - 17395221
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||| | |||||||| ||||| |||||| |||||||||||||||    
T  17395167 attatcccaattatatccttaaacaattttttctataatgaagatcgttgttggt 17395221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 657
Target Start/End: Original strand, 32509238 - 32509288
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgt 657  Q
    ||||||||| |||||| ||||||||| ||||| |||||||||||| |||||    
T  32509238 attatcccaattatacatttaaacaaatttttctataataaagattgttgt 32509288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 52957678 - 52957624
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| || | |||||||    
T  52957678 attatcccaattatacccttaaacaactttttatataataaatattgatgttggt 52957624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 662
Target Start/End: Complemental strand, 21030644 - 21030607
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  21030644 ttaaacaactttttctataataaagattgttgttggtg 21030607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 49429755 - 49429706
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||    
T  49429755 attatctcaattatacccttaaacaactttttctataataaagattgttg 49429706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 659
Target Start/End: Original strand, 26977978 - 26978030
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| || ||||||||||||| || ||||| |||||||||||| |||||||    
T  26977978 attatctcaattatacctttaaataaatttttttataataaagattgttgttg 26978030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 618 - 662
Target Start/End: Complemental strand, 39822677 - 39822633
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| |||||||| ||||| |||||||||||| ||||||||||    
T  39822677 tatacccttaaacaattttttttataataaagattgttgttggtg 39822633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 618 - 662
Target Start/End: Original strand, 45885796 - 45885840
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| |||||||| ||||| |||||||||||| ||||||||||    
T  45885796 tatacccttaaacaattttttctataataaagattgttgttggtg 45885840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 617 - 661
Target Start/End: Complemental strand, 49758475 - 49758431
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    |||||||||||||||| ||||| |||||| ||||||||| |||||    
T  49758475 ttatacctttaaacaaatttttctataattaagatcgtttttggt 49758431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 257; Significance: 1e-143; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 65 - 537
Target Start/End: Original strand, 6659745 - 6660217
Alignment:
Q  65 cttcgccataaattggaaaagggtctacattgacatccggaattggtcgttgctgacttgaactcccaacctcatgtgcttgcctaaactgagtcagttg 164  Q
    |||||||||||||||||||||| |||||||||  ||| |||| ||    ||||||||||||||||||| ||||||||||||||| ||| |||| || |||    
T  6659745 cttcgccataaattggaaaaggctctacattgggatctggaactgacgcttgctgacttgaactcccatcctcatgtgcttgccgaaattgagccaattg 6659844  T
Q  165 ctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatctttgaataagg 264  Q
    |||||||||| |||||||  |||||||||||||||| ||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||    
T  6659845 ctcctcatatgttcgttggcggctaagcaaatcttgtacaacggcctcatgtctcgccatttgctgggtgagctgctcttgagtcaatctttgaataagg 6659944  T
Q  265 tcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgctgcaacacccttccggcagttagcaa 364  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||| |||||| |||| |||||||||||||||| |||||||      
T  6659945 tcacgcatctcaggggtcagtgcaggctgctgggaggatccttcgccatgattaagggtaaatctgagggttgttgcaacacccttccggtagttagcgg 6660044  T
Q  365 ccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggccaaactatgatcaatagataacccttgaga 464  Q
    |||||||||||||||||||||  |||||||||||||||||  || |||||||||||||| ||| |||||||||||||||||||| || |||||||| | |    
T  6660045 ccaagttaccggcaccatataattttcctttggttttatcgccagcaactttggtccaaatttggagggccaaactatgatcaacagttaaccctttata 6660144  T
Q  465 aagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgacaaataacaa 537  Q
    || || ||  ||||| ||||  ||||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  6660145 aatagccttggcaagttgtcggtcatattcctcctattcaaatgataacagaatagttaatgacaactaacaa 6660217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 139 - 524
Target Start/End: Complemental strand, 44326230 - 44325842
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    ||||||||| ||| | ||| ||| |||||||| |||  || ||| ||| ||| |||||||||||||| ||   | |||||  |||| || ||||||| ||    
T  44326230 tgtgcttgcgtaagccgagccagctgctcctcgtataatctttggtggttaatcaaatcttgcacaagggatgcttgactttccatctgctgtgtgaact 44326131  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| |||||||| |||||||| || | |||||| || || ||  ||||||| ||| ||| ||||||||| ||||| ||||| |||||||| ||||     
T  44326130 gctcttgtgtcaatctatgaataagctcccgcatctctggcgtcagctcaggctgctgggaggttccttcaccctgattgagggttagtctgagggttga 44326031  T
Q  339 tgcaaca---cccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggcc 435  Q
    |||||||   ||||||||| |||||||  | ||||||||   |||||| || ||||||||  | || ||  ||||||||||  ||||||| | || || |    
T  44326030 tgcaacactgcccttccggtagttagcggctaagttaccaagaccatagagctttcctttcttcttgtcgccaacaacttttttccaagtgttgaaggtc 44325931  T
Q  436 aaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaa 524  Q
    |||   |||| |||||   |||||||||||| || |||||||||||  |  ||||||||||||| ||||||| ||||||||||| ||||    
T  44325930 aaagagtgattaatagtagacccttgagaaatagcctcagcaagctaccggtcatactcctcctgttcaaataataacaaaatatttaa 44325842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 5880788 - 5880843
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| |||||||||| ||||||||||||||| | |||||||||| ||||||||||    
T  5880788 attattccagttatacatttaaacaactttttatgtaataaagattgttgttggtg 5880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 33676810 - 33676755
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  33676810 attatcccaattatacccttaaacaattttttctataataaagattgttgttggtg 33676755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 608 - 662
Target Start/End: Original strand, 15265559 - 15265613
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  15265559 ttatcccaattatacccttaaacaactttttatataataaagattattgttggtg 15265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 608 - 662
Target Start/End: Original strand, 34063213 - 34063267
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||| |||  |||||||| ||||| |||||||||||||||||||||||    
T  34063213 ttatcccagttgtactcttaaacaaatttttctataataaagatcgttgttggtg 34063267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 658
Target Start/End: Complemental strand, 7603746 - 7603697
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||| ||||||  |||||||||||||| |||||||||||||||||||    
T  7603746 tatcccaattatactcttaaacaactttttctataataaagatcgttgtt 7603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 658
Target Start/End: Original strand, 37609971 - 37610020
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||| |||||| ||||||||||||||| |||||||||||| ||||||    
T  37609971 tatcccaattatacttttaaacaactttttctataataaagattgttgtt 37610020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 629604 - 629659
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||||||||||| |||||||| ||||| |||||||||||| ||| ||||||    
T  629604 attattccagttatacccttaaacaattttttctataataaagattgtttttggtg 629659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 7537338 - 7537283
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||| | ||||| |||||||| |||||||||||| ||||||||||    
T  7537338 attatcccaattataaccttaaaaaactttttatataataaagattgttgttggtg 7537283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 12069432 - 12069487
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| | ||||||  |||||||||||||| |||||||||||| ||||||||||    
T  12069432 attatcctaattatactcttaaacaactttttctataataaagattgttgttggtg 12069487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 35126026 - 35125971
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  ||||||||||||||  ||||||||||| ||||||||||    
T  35126026 attatcccaattatactcttaaacaactttttcaataataaagattgttgttggtg 35125971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 41122659 - 41122714
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| | ||||| ||||||||| |||| |||||||||||| ||||||||||    
T  41122659 attatcccaatcatacccttaaacaacattttttataataaagattgttgttggtg 41122714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 42651839 - 42651894
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| |||||||||||||| ||| |||||||| ||||||||||    
T  42651839 attattccaattatacccttaaacaactttttttattataaagattgttgttggtg 42651894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 659
Target Start/End: Complemental strand, 12413169 - 12413128
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| |||||||||||||| ||||||||| ||||||||||    
T  12413169 tatacccttaaacaactttttctataataaatatcgttgttg 12413128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 659
Target Start/End: Complemental strand, 12425229 - 12425188
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| |||||||||||||| ||||||||| ||||||||||    
T  12425229 tatacccttaaacaactttttctataataaatatcgttgttg 12425188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 618 - 659
Target Start/End: Complemental strand, 13594333 - 13594292
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| |||||||| ||||| ||||||||||||||||||||    
T  13594333 tatacccttaaacaattttttctataataaagatcgttgttg 13594292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 651
Target Start/End: Original strand, 27913058 - 27913102
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    ||||||||| ||||||  |||||||||||||| ||||||||||||    
T  27913058 attatcccaattatactcttaaacaactttttatataataaagat 27913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 36080213 - 36080271
Alignment:
Q  607 attatcccagttatacctttaaacaac---tttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||   ||||| |||||||||||| ||||||||||    
T  36080213 attatcccaattatacccttaaacaacaattttttctataataaagattgttgttggtg 36080271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 651
Target Start/End: Complemental strand, 41384583 - 41384539
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    ||||||||| ||||| | |||||||||||||| ||||||||||||    
T  41384583 attatcccaattatatccttaaacaactttttctataataaagat 41384539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 626 - 662
Target Start/End: Complemental strand, 44020104 - 44020068
Alignment:
Q  626 taaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  44020104 taaacaactttttctataataaagattgttgttggtg 44020068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 137 - 332
Target Start/End: Original strand, 6052493 - 6052688
Alignment:
Q  137 catgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgag 236  Q
    ||||||||||||||||||||| ||| ||||||||||||  || |||  || |||||||||||||| |||||||| | |||||||||||||| || | |      
T  6052493 catgtgcttgcctaaactgagccagctgctcctcatatgatctttggcggttaagcaaatcttgctcaacggccgcttgactcgccatttgctgcgcgga 6052592  T
Q  237 ctgctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgag 332  Q
    ||||||||| |||||||| |||||||| || | |||||| ||||| ||  ||||||| ||| || |||||||||||||||| ||||||||||||||    
T  6052593 ctgctcttgtgtcaatctatgaataagctcccgcatctctggggtcagctcaggctgctgggagaatccttcaccatgattgagggtaagtctgag 6052688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 48624867 - 48624812
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  48624867 attatcccaattatacccttaaacaactttttctataataaagatcgttgttggtg 48624812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 19371713 - 19371768
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  19371713 attatcccaattatacccttaaacaactttttctataataaagattgttgttggtg 19371768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 21305552 - 21305497
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  21305552 attatctcaattatacccttaaataactttttgtataataaagattgttgttggtg 21305497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 605 - 651
Target Start/End: Complemental strand, 29366229 - 29366183
Alignment:
Q  605 taattatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  29366229 taattatcccaattatacccttaaacaactttttctataataaagat 29366183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 48110356 - 48110302
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||||  ||||||||| |||| ||||||||||||||||||||||    
T  48110356 attatcccaattatactcttaaacaacattttctataataaagatcgttgttggt 48110302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 39151789 - 39151834
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  39151789 ttatatctttaaacaactttttctataataaagattgttgttggtg 39151834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 45001027 - 45000975
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| |||||||    
T  45001027 attatctcaattatacccttaaacaactttttctataataaagattgttgttg 45000975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 2275723 - 2275668
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||||||| || ||||||||||    
T  2275723 attatctcaattatacccttaaacaactttttctataataaaaattgttgttggtg 2275668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 658
Target Start/End: Original strand, 23050855 - 23050906
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||||| ||||||| |||||||||| ||| |||||||||||| ||||||    
T  23050855 attatcccaattatacccttaaacaactatttttataataaagattgttgtt 23050906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 659
Target Start/End: Complemental strand, 25610668 - 25610617
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| |||||||    
T  25610668 ttatctcaattatacccttaaacaactttttctataataaagattgttgttg 25610617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 31283561 - 31283506
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  31283561 attatcccaattatactattaaacaattttttctataataaagattgttgttggtg 31283506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 36609920 - 36609865
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  36609920 attatctcaattatacccttaaacaattttttctataataaagattgttgttggtg 36609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 657
Target Start/End: Original strand, 39779062 - 39779109
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttgt 657  Q
    |||||| ||||||| |||||||||||||| |||||||||||| |||||    
T  39779062 atcccaattatacccttaaacaactttttttataataaagattgttgt 39779109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 47901759 - 47901813
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  47901759 attatctcaattatacccttaaacaacttttt-tataataaagattgttgttggtg 47901813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 7525810 - 7525855
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||| |||| | ||||||||||||||||||||||    
T  7525810 ttatacccttaaacaatttttcggataataaagatcgttgttggtg 7525855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 660
Target Start/End: Original strand, 10040398 - 10040451
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttgg 660  Q
    |||||||||  |||||| |||||||| ||||| |||||||||||| ||||||||    
T  10040398 attatcccaactataccgttaaacaattttttctataataaagattgttgttgg 10040451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 625 - 662
Target Start/End: Complemental strand, 21093679 - 21093642
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  21093679 ttaaacaactttttctataataaagatcattgttggtg 21093642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 659
Target Start/End: Original strand, 372630 - 372682
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||||| || ||||||||||||| ||||| |||||| ||||| |||||||    
T  372630 attatcccaattctacctttaaacaattttttctataatgaagattgttgttg 372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 659
Target Start/End: Original strand, 7628674 - 7628726
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||| | ||||| | |||||||||||||| |||||||||||| |||||||    
T  7628674 attatcctaattatatcattaaacaactttttctataataaagattgttgttg 7628726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 618 - 658
Target Start/End: Complemental strand, 48103839 - 48103799
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    |||| |||||||||||||||| |||||||||||| ||||||    
T  48103839 tataactttaaacaactttttctataataaagattgttgtt 48103799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 139 - 529
Target Start/End: Original strand, 7430392 - 7430785
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    ||||||||| ||| | ||| ||| |||||||| |||  || |||  || ||| ||||| |||||||| |||| | ||||||||||| || || |||| ||    
T  7430392 tgtgcttgcgtaagccgagccagctgctcctcgtataatctttggcggttaatcaaatattgcacaagggccgcttgactcgccatctgctgcgtgaact 7430491  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| |||||||| |||||||| || | |||||| || || ||  ||||||| ||| ||| ||||||||||||||| ||||| |||||||| ||||     
T  7430492 gctcttgtgtcaatctatgaataagctcccgcatctctggcgtcagctcaggctgctgggaggttccttcaccatgattgagggttagtctgagggttga 7430591  T
Q  339 tgcaacac---ccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggcc 435  Q
    ||||||||   || ||||| |||||||| | ||||||||   | |||| || ||||||||  | || ||| ||||||||||  ||||||| | || || |    
T  7430592 tgcaacactatccgtccggtagttagcagctaagttaccacgaacatagagctttcctttcttcttgtcaccaacaacttttttccaagtgttgaaggtc 7430691  T
Q  436 aaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    |||   ||||||||||   |||||||||||| |  ||||||||||||  | ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  7430692 aaagagtgatcaatagtagacccttgagaaatatcctcagcaagctgctagtcatactcctcctgttcaaataataacaaaatatttaaggaca 7430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 139 - 529
Target Start/End: Complemental strand, 14606701 - 14606308
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    ||||||||||||| ||||| ||| |||||||| |||  || |||  || |||||||||||  ||||| || | | ||||| ||||| || || |||| ||    
T  14606701 tgtgcttgcctaagctgagccagctgctcctcgtatgatctttggaggttaagcaaatctgccacaagggtcgcttgacttgccatctgctgcgtgaact 14606602  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| |||||||| |||||||| || | |||||| || || ||  || |||| ||| ||||||||||||||||||| ||||| |||||||| ||||     
T  14606601 gctcttgtgtcaatctatgaataagctcccgcatctctggtgtcagctcatgctgctgggaggatccttcaccatgattgagggttagtctgagggttga 14606502  T
Q  339 tgcaacac---ccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggcc 435  Q
    ||||||||   |||||||| |||||||  | ||||| ||   |||||| || ||||||||  | || ||  ||||||||||  ||||||| | || || |    
T  14606501 tgcaacactatccttccggtagttagcggctaagtttccaagaccatagagctttcctttcttcttgtcgccaacaacttttttccaagtgttgaaggtc 14606402  T
Q  436 aaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
    |||   ||||||||||   |||||||||||| || |||||||||||| |  ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  14606401 aaagagtgatcaatagtagacccttgagaaatagcctcagcaagctgccggtcatactcctcctgttcaaataataacaaaatatttaaggaca 14606308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 13303931 - 13303986
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  13303931 attatcccaattatacctttaaacaactttttctataataaagattgttgttggtg 13303986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 48419977 - 48420032
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  48419977 attatcccaattataccattaaacaactttttctataataaagatcgttgttggtg 48420032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 25298041 - 25298096
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || |||||||||||||||| ||||| |||||||||||||||||||||||    
T  25298041 attatctcaattatacctttaaacaaatttttctataataaagatcgttgttggtg 25298096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 47576790 - 47576735
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||||||||||||| ||||||||||||||| ||||||||| || ||||||||||    
T  47576790 attatcccagttatacttttaaacaactttttctataataaatattgttgttggtg 47576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 662
Target Start/End: Original strand, 46022372 - 46022428
Alignment:
Q  606 aattatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| ||||||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  46022372 aattattccagttatacccttaaacaattttttctataataaagattgttgttggtg 46022428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 11344927 - 11344982
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||| ||||||||||    
T  11344927 attatcccaattatactcttaaacaactttttctataataaagattgttgttggtg 11344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 23929009 - 23929064
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  23929009 attatcccaattatacccttaaacaactttttatataataaagattattgttggtg 23929064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 31528623 - 31528678
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || |||||| ||||||||||||||| |||||||||||| ||||||||||    
T  31528623 attatctcaattatacatttaaacaactttttctataataaagattgttgttggtg 31528678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 35673704 - 35673759
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||||||||||||||| || ||||||||| |||||||||||||    
T  35673704 attatctcaattatacctttaaacaacttattctataataaatatcgttgttggtg 35673759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 43575727 - 43575672
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||||||    
T  43575727 attatcccaattatacccttaaacaaatttttctataataaagatcattgttggtg 43575672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 608 - 659
Target Start/End: Complemental strand, 48715952 - 48715901
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||| || |||||||||||||||||||||| |||||||| |||||||||||    
T  48715952 ttatctcaattatacctttaaacaactttttctataataatgatcgttgttg 48715901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 52043366 - 52043421
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || |||||||||||||||||||||| ||||||||||||  |||||||||    
T  52043366 attatctcaattatacctttaaacaactttttctataataaagatttttgttggtg 52043421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 13315302 - 13315248
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    |||||||||  |||||| |||||||||||||| |||||||||||| |||||||||    
T  13315302 attatcccaagtatacccttaaacaactttttctataataaagattgttgttggt 13315248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 665
Target Start/End: Original strand, 29716902 - 29716960
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtgatg 665  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||| ||||||| |||||    
T  29716902 attatcccaattatacccttaaacaattttttctataataaagattgttgttgttgatg 29716960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 662
Target Start/End: Original strand, 7548424 - 7548477
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||| ||||||||||    
T  7548424 tatcccaattatacccttaaacaattttttctataataaagattgttgttggtg 7548477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 12267063 - 12267108
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  12267063 ttatacccttaaacaactttttctataataaagattgttgttggtg 12267108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 661
Target Start/End: Original strand, 40403416 - 40403453
Alignment:
Q  624 tttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40403416 tttaaacaactttttctataataaagatcgttgttggt 40403453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 18227061 - 18227009
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| || |||||||||||||||||||||| ||||| |||||| |||||||    
T  18227061 attatctcaattatacctttaaacaactttttctataacaaagattgttgttg 18227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 115962 - 115907
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||| | |||||||||||||| |||||||||||| ||||||||||    
T  115962 attatctcaattatatcattaaacaactttttatataataaagattgttgttggtg 115907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 8574004 - 8574059
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||  |||||||||||||| |||||||||||| ||||||||||    
T  8574004 attatctcaattatactcttaaacaactttttctataataaagattgttgttggtg 8574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 12301004 - 12301059
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || |||||| ||||||||||||||| ||||||||| || ||||||||||    
T  12301004 attatctcaattatacttttaaacaactttttctataataaaaattgttgttggtg 12301059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 13057321 - 13057266
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||||||||| || ||||| |||||||||||| ||||||||||    
T  13057321 attatctcaattatacctttaaataattttttctataataaagattgttgttggtg 13057266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 13315174 - 13315119
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||| | |||||||||||||| ||| |||||||| ||||||||||    
T  13315174 attatcccaattatatccttaaacaactttttctattataaagattgttgttggtg 13315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 33326850 - 33326795
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||  |||||||||||||| ||||||||| || ||||||||||    
T  33326850 attatcccaattatactcttaaacaactttttctataataaatattgttgttggtg 33326795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 49368279 - 49368334
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| | ||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  49368279 attatccgaattataccttcaaacaaccttttatataataaagattgttgttggtg 49368334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 650408 - 650354
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    |||||| || |||||||  ||||||||||||| |||| |||||||||||||||||    
T  650408 attatctcaattatacccctaaacaactttttctatagtaaagatcgttgttggt 650354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 608 - 662
Target Start/End: Original strand, 16424473 - 16424527
Alignment:
Q  608 ttatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||| || ||||||| |||||||||||||| |||||||| ||| ||||||||||    
T  16424473 ttatcacaattatacccttaaacaactttttctataataaggattgttgttggtg 16424527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 665
Target Start/End: Original strand, 29689390 - 29689448
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtgatg 665  Q
    |||||| || ||||||| |||||||| ||||| |||||||||||| ||||||| |||||    
T  29689390 attatctcaattatacccttaaacaattttttctataataaagattgttgttgttgatg 29689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 48419668 - 48419614
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||| | | || ||||||||| ||||||||||||||||||||||    
T  48419668 attatcccaattatagcatcaaccaactttttctataataaagatcgttgttggt 48419614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 48995522 - 48995468
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||||||||||| ||||| || ||||| |||||||||||| |||||||||    
T  48995522 attattccagttatacccttaaataattttttctataataaagattgttgttggt 48995468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 14258753 - 14258700
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||| | |||||||||||||| |||||||||||| |||| |||||    
T  14258753 tatcccaattatatcattaaacaactttttctataataaagattgttgatggtg 14258700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 20906764 - 20906809
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||| ||| |||||||||||| ||||||||||    
T  20906764 ttatacccttaaacaactctttatataataaagattgttgttggtg 20906809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 656
Target Start/End: Complemental strand, 22094054 - 22094005
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||| ||||    
T  22094054 attatcccaattataccgttaaacaaatttttttataataaagattgttg 22094005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 655
Target Start/End: Original strand, 9306305 - 9306353
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgtt 655  Q
    |||||| ||||| |||| ||||| |||||||| ||||||||||||||||    
T  9306305 attatctcagttgtacccttaaagaactttttctataataaagatcgtt 9306353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 139 - 524
Target Start/End: Complemental strand, 22016122 - 22015734
Alignment:
Q  139 tgtgcttgcctaaactgagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagct 238  Q
    ||||||||| ||| | ||| ||| |||||||| |||  || ||| ||| ||| |||||||||||||| ||   | |||||  |||| || ||||||| ||    
T  22016122 tgtgcttgcgtaagccgagccagctgctcctcgtataatctttggtggttaatcaaatcttgcacaagggatgcttgactttccatctgctgtgtgaact 22016023  T
Q  239 gctcttgagtcaatctttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgc 338  Q
    ||||||| |||||||| |||||||| || | |||||| || || ||  ||||||| ||| ||| ||||||||| ||||| ||||| |||||||| ||||     
T  22016022 gctcttgtgtcaatctatgaataagctcccgcatctctggcgtcagctcaggctgctgggaggttccttcaccctgattgagggttagtctgagggttga 22015923  T
Q  339 tgcaaca---cccttccggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggcc 435  Q
    |||||||   ||||||||| |||||||  | ||||||||   |||||| || ||||||||  | || ||  ||||||||||  ||||||| | || || |    
T  22015922 tgcaacactgcccttccggtagttagcggctaagttaccaagaccatagagctttcctttcttcttgtcgccaacaacttttttccaagtgttgaaggtc 22015823  T
Q  436 aaactatgatcaatagataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaa 524  Q
    |||   |||| |||||   |||||||||||| || |||||||||||  |  ||||||||||||| ||||||| ||||||||||| ||||    
T  22015822 aaagagtgattaatagtagacccttgagaaatagcctcagcaagctaccggtcatactcctcctgttcaaataataacaaaatatttaa 22015734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 6001459 - 6001404
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  6001459 attatcccaattatacccttaaacaactttttctataataaagattgttgttggtg 6001404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 10460114 - 10460169
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||||||||||||||    
T  10460114 attatctcaattatacccttaaacaactttttctataataaagatcgttgttggtg 10460169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 14965223 - 14965278
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||    
T  14965223 attatcccaatcatacctttaaacaactttttctataataaagatggttgttggtg 14965278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 662
Target Start/End: Original strand, 31861836 - 31861888
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||| ||||||    
T  31861836 atcccaattatacccttaaacaactttttctataataaagatcgtttttggtg 31861888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 28592543 - 28592598
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| || ||||||||||    
T  28592543 attatcccaattatacccttaaacaactttttatataataaatattgttgttggtg 28592598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 28712068 - 28712013
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  28712068 attatctcaattatacccttaaacaactttttctataataaagattgttgttggtg 28712013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 7451790 - 7451744
Alignment:
Q  614 cagttatacctttaaacaactttttgtataataaagatcgttgttgg 660  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||||    
T  7451790 cagttataccattaaacaactttttctataataaagattgttgttgg 7451744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 10343478 - 10343424
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||| ||||||| |||||||||||||| |||||||||||| |||||||||    
T  10343478 attattccaattatacccttaaacaactttttctataataaagatggttgttggt 10343424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 34210147 - 34210093
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||| ||||| |||||||||||||||| |||||||||| | |||||||||    
T  34210147 attatcccaattatatctttaaacaactttttctataataaaggttgttgttggt 34210093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 32531123 - 32531168
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  32531123 ttataccattaaacaactttttctataataaagattgttgttggtg 32531168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 17353095 - 17353149
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||||||    
T  17353095 attatcccaattatacatttaa-caactttttctataataaagattgttgttggtg 17353149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 22535145 - 22535090
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| || |||| |||||||||||||| ||||||||| || ||||||||||    
T  22535145 attatcccaattgtacccttaaacaactttttctataataaatattgttgttggtg 22535090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 12169962 - 12169917
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| | ||| |||||||| |||||||||||||||||||||||    
T  12169962 ttataccctcaaataactttttctataataaagatcgttgttggtg 12169917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 26253031 - 26252978
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||||| |||||||| ||||| ||||||||||||  |||||||||    
T  26253031 tatcccaattatacccttaaacaaatttttatataataaagattattgttggtg 26252978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 651
Target Start/End: Complemental strand, 4997058 - 4997014
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagat 651  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||    
T  4997058 attatctcaattatacccttaaacaactttttctataataaagat 4997014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 663
Target Start/End: Original strand, 11646491 - 11646547
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtga 663  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||| |||| ||||||    
T  11646491 attatcccaattatatccttaaacaactttttctataaaaaagattgttgctggtga 11646547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 610 - 662
Target Start/End: Original strand, 17942739 - 17942791
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| ||||||| |||||||||||||| ||| |||||||| ||| ||||||    
T  17942739 atcccaattatacccttaaacaactttttctatgataaagattgttattggtg 17942791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 529
Target Start/End: Original strand, 52815 - 53192
Alignment:
Q  155 gagtcagttgctcctcatattttcgttgttggctaagcaaatcttgcacaacggcctcgtgactcgccatttgttgtgtgagctgctcttgagtcaatct 254  Q
    ||||||| |||||||| |||  || |||  || ||| ||| |||||||||| |||  | ||||| ||||| || || | || ||||||||| | ||||||    
T  52815 gagtcagctgctcctcgtataatctttggcggttaatcaattcttgcacaagggctgcttgacttgccatctgctgcgagaactgctcttgtgacaatct 52914  T
Q  255 ttgaataaggtcacacatctcaggggttagtgcaggctgttggaaggatccttcaccatgattaagggtaagtctgagagttgctgcaacac---ccttc 351  Q
     ||||| || || | |||||| || || ||   |||||| ||| ||| ||||||||| ||||| ||||| |||||||| |||| ||||||||   |||||    
T  52915 atgaatgagctcccgcatctctggcgtcagctgaggctgctgggaggttccttcaccctgattgagggttagtctgagggttgatgcaacacttcccttc 53014  T
Q  352 cggcagttagcaaccaagttaccggcaccatatagatttcctttggttttatcaacaacaactttggtccaagtttagagggccaaactatgatcaatag 451  Q
    ||  |||||||  | ||||||||    ||||| || ||||||||  | || ||  | ||||||||  ||||||| | || || ||||   ||||||||||    
T  53015 cgatagttagcggctaagttaccaaggccatagagctttcctttcttcttgtcgccgacaacttttttccaagtgttgaaggtcaaagagtgatcaatag 53114  T
Q  452 ataacccttgagaaagagtctcagcaagctgtcaatcatactcctcctattcaaatgataacaaaatagttaatgaca 529  Q
       |||||||||||| || |||||||||||| |  ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  53115 tagacccttgagaaatagcctcagcaagctgccggtcatactcctcctgttcaaataataacaaaatatttaaggaca 53192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 29684223 - 29684278
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  29684223 attatcccaattatacttttaaacaactttttctataataaagatcgttgttggtg 29684278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 662
Target Start/End: Complemental strand, 15872145 - 15872092
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  15872145 tatcccaattatacctttaaacaactttttctataataaagattgttgttggtg 15872092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 3739567 - 3739622
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  3739567 attatcccaattatacctttaaacaactttttctataataaaggttgttgttggtg 3739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 25722787 - 25722842
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| | |||||||||||||||||||||| |||||||||||| ||||||||||    
T  25722787 attatcctaattatacctttaaacaactttttctataataaagattgttgttggtg 25722842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 1554761 - 1554816
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||||||    
T  1554761 attatcccaattatacccttaaataactttttctataataaagattgttgttggtg 1554816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 10865239 - 10865184
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| |||||||||||| ||| ||||||    
T  10865239 attatcccaattatacccttaaacaactttttctataataaagattgttattggtg 10865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 658
Target Start/End: Original strand, 24688616 - 24688667
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    |||||| || |||||||||||||||| ||||| |||||||||||||||||||    
T  24688616 attatctcaattatacctttaaacaattttttctataataaagatcgttgtt 24688667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 27020577 - 27020522
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| || ||||||||||||||||||||    
T  27020577 attatctcaattatacccttaaacaactttttctacaataaagatcgttgttggtg 27020522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 38498488 - 38498543
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| || ||||||||| ||||||||||    
T  38498488 attatcccaattatacccttaaacaactttttctacaataaagattgttgttggtg 38498543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 45440648 - 45440703
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  45440648 attatcccaattatacccttaaacaactttttatataataaagattattgttggtg 45440703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 38804656 - 38804602
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||||||||||  ||||||| |||||| |||||||||||| |||||||||    
T  38804656 attatcccagttatactcttaaacacctttttctataataaagattgttgttggt 38804602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 662
Target Start/End: Original strand, 15898759 - 15898812
Alignment:
Q  609 tatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| ||||||| |||||||||||||| ||||||||| || ||||||||||    
T  15898759 tatcccaattatacccttaaacaactttttttataataaaaattgttgttggtg 15898812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 4437918 - 4437867
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||||||| ||||| | |||||||| ||||| |||||||||||||||||||    
T  4437918 attatcccaattatatcattaaacaattttttctataataaagatcgttgtt 4437867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 15919631 - 15919576
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| ||||||| |||||||||||| | |||||||||||  ||||||||||    
T  15919631 attatcccaattatacccttaaacaactttctctataataaagaatgttgttggtg 15919576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 18918403 - 18918349
Alignment:
Q  607 attatcccagttatac--ctttaaacaactttttgtataataaagatcgttgttg 659  Q
    ||||||||| ||||||  |||||||||| ||||| ||||||||||||||||||||    
T  18918403 attatcccaattatacacctttaaacaattttttctataataaagatcgttgttg 18918349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 658
Target Start/End: Complemental strand, 28969698 - 28969647
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgtt 658  Q
    ||||| ||| |||||| ||||||||||||||| |||||||||||| ||||||    
T  28969698 attattccaattatacttttaaacaactttttctataataaagattgttgtt 28969647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 34966688 - 34966743
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| ||||||||||||  |||||||||    
T  34966688 attatctcaattatacccttaaacaactttttctataataaagatttttgttggtg 34966743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 41942565 - 41942510
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    |||||| || ||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  41942565 attatctcaattatacccttaaacaactttttctataataaagattgttgtgggtg 41942510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 45356548 - 45356494
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||| |||||| |||||||| ||||||||||||| |||||||||    
T  45356548 attatcccaattatac-tttaaataactttttctataataaagatctttgttggtg 45356494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Original strand, 6165917 - 6165971
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||| ||||||| || ||||||||||| ||||||||||||| ||||||||    
T  6165917 attattccaattatacccttcaacaactttttctataataaagatcattgttggt 6165971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 607 - 661
Target Start/End: Complemental strand, 18279447 - 18279393
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||| ||| ||||||| ||||| |||||||| |||||||||||| |||||||||    
T  18279447 attattccaattatacccttaaataactttttctataataaagatggttgttggt 18279393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 444292 - 444337
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| ||| |||||||| ||||||||||    
T  444292 ttatacccttaaacaactttttatatgataaagattgttgttggtg 444337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 26784650 - 26784695
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  26784650 ttatacccttaaacaactttttctataataaagattgttgtcggtg 26784695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 617 - 662
Target Start/End: Complemental strand, 32856687 - 32856642
Alignment:
Q  617 ttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||| |||||||||||||| |||||||||||| |||| |||||    
T  32856687 ttatacccttaaacaactttttctataataaagattgttgatggtg 32856642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 662
Target Start/End: Complemental strand, 2692123 - 2692067
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgt-ataataaagatcgttgttggtg 662  Q
    ||||| ||| ||||||| |||||||||||||| | ||||||||||| ||||||||||    
T  2692123 attattccaattatacccttaaacaacttttttttataataaagattgttgttggtg 2692067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 3369563 - 3369511
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| |||||||||  ||| |||||||||| |||||||||||| |||||||    
T  3369563 attatctcagttatactattagacaactttttctataataaagattgttgttg 3369511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 607 - 655
Target Start/End: Original strand, 43922205 - 43922253
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgtt 655  Q
    |||||| || ||||||  |||||||||||||| ||||||||||||||||    
T  43922205 attatctcaattatactcttaaacaactttttctataataaagatcgtt 43922253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 607 - 662
Target Start/End: Original strand, 4819 - 4874
Alignment:
Q  607 attatcccagttatacctttaaacaactttttgtataataaagatcgttgttggtg 662  Q
    ||||||||| |||||| ||||||||| ||||| |||||||||||| ||||||||||    
T  4819 attatcccaattatacatttaaacaattttttctataataaagattgttgttggtg 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 618 - 660
Target Start/End: Complemental strand, 1114 - 1072
Alignment:
Q  618 tatacctttaaacaactttttgtataataaagatcgttgttgg 660  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  1114 tatacccttaaacaactttttctataataaagatcgttgttgg 1072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 610 - 656
Target Start/End: Original strand, 151460 - 151506
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttg 656  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||    
T  151460 atcccaattatacctttaaacaactttttctataataaagattgttg 151506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 8782 - 8733
Alignment:
Q  610 atcccagttatacctttaaacaactttttgtataataaagatcgttgttg 659  Q
    |||||| |||||||||||||||| ||||| |||||||||||| |||||||    
T  8782 atcccaattatacctttaaacaattttttctataataaagattgttgttg 8733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 607 - 659
Target Start/End: Complemental strand, 41630 - 41577
Alignment:
Q  607 attatcccagttatacctttaaacaact-ttttgtataataaagatcgttgttg 659  Q
    ||||||||| ||||||| |||||||||| |||| |||||||||||| |||||||    
T  41630 attatcccaattatacccttaaacaacttttttctataataaagattgttgttg 41577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 661
Target Start/End: Complemental strand, 16690 - 16654
Alignment:
Q  625 ttaaacaactttttgtataataaagatcgttgttggt 661  Q
    ||||||||||||||  |||||||||||||||||||||    
T  16690 ttaaacaactttttcaataataaagatcgttgttggt 16654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University