View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3985_low_48 (Length: 238)

Name: NF3985_low_48
Description: NF3985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3985_low_48
NF3985_low_48
[»] chr8 (30 HSPs)
chr8 (22-238)||(24568985-24569203)
chr8 (21-151)||(27932459-27932593)
chr8 (18-150)||(20399635-20399770)
chr8 (18-151)||(1012662-1012797)
chr8 (24-152)||(2075742-2075873)
chr8 (18-150)||(32303104-32303239)
chr8 (34-150)||(27777108-27777227)
chr8 (18-150)||(43113536-43113671)
chr8 (23-150)||(17220760-17220892)
chr8 (18-113)||(29108770-29108867)
chr8 (22-150)||(37960872-37961003)
chr8 (18-150)||(24927992-24928127)
chr8 (20-150)||(40248281-40248414)
chr8 (18-151)||(24869933-24870069)
chr8 (18-100)||(45236108-45236192)
chr8 (87-153)||(1063627-1063694)
chr8 (18-146)||(5858566-5858697)
chr8 (41-150)||(34139513-34139630)
chr8 (57-150)||(34777142-34777238)
chr8 (94-150)||(36131839-36131896)
chr8 (21-113)||(4230678-4230772)
chr8 (18-99)||(15173842-15173925)
chr8 (91-150)||(17469361-17469421)
chr8 (27-111)||(14155584-14155670)
chr8 (50-150)||(29416097-29416200)
chr8 (28-81)||(6388498-6388551)
chr8 (18-63)||(9642351-9642396)
chr8 (22-113)||(39445524-39445617)
chr8 (118-150)||(14186454-14186486)
chr8 (21-81)||(14687445-14687505)
[»] chr3 (42 HSPs)
chr3 (18-151)||(4557214-4557350)
chr3 (18-151)||(49580107-49580243)
chr3 (20-150)||(4015954-4016087)
chr3 (18-151)||(29284379-29284515)
chr3 (18-152)||(39655181-39655318)
chr3 (18-150)||(44953345-44953480)
chr3 (18-151)||(52572652-52572788)
chr3 (18-150)||(7469688-7469823)
chr3 (18-147)||(22535754-22535886)
chr3 (18-151)||(48390726-48390862)
chr3 (18-147)||(10043195-10043327)
chr3 (21-150)||(44252793-44252925)
chr3 (18-150)||(42758417-42758552)
chr3 (18-152)||(44639317-44639454)
chr3 (25-151)||(48305550-48305679)
chr3 (18-151)||(53631947-53632083)
chr3 (28-151)||(6738314-6738440)
chr3 (23-150)||(19111782-19111912)
chr3 (59-150)||(10371183-10371277)
chr3 (44-150)||(30682889-30682998)
chr3 (34-149)||(54317203-54317321)
chr3 (59-149)||(831086-831179)
chr3 (57-151)||(23546857-23546954)
chr3 (18-147)||(34025997-34026129)
chr3 (18-81)||(30616263-30616326)
chr3 (18-110)||(52198198-52198292)
chr3 (91-151)||(12369112-12369173)
chr3 (18-147)||(23153978-23154109)
chr3 (20-141)||(34119701-34119825)
chr3 (20-113)||(27252610-27252704)
chr3 (26-111)||(42243438-42243525)
chr3 (18-150)||(43582620-43582755)
chr3 (26-81)||(34154465-34154520)
chr3 (62-150)||(39728758-39728849)
chr3 (21-150)||(44106704-44106834)
chr3 (18-81)||(44172669-44172732)
chr3 (18-81)||(44179369-44179432)
chr3 (39-81)||(2490369-2490411)
chr3 (22-113)||(3385804-3385897)
chr3 (64-150)||(29858485-29858574)
chr3 (18-144)||(30904734-30904861)
chr3 (118-150)||(52200361-52200393)
[»] chr2 (24 HSPs)
chr2 (18-150)||(37106736-37106871)
chr2 (22-151)||(12341648-12341780)
chr2 (18-151)||(30846990-30847126)
chr2 (18-151)||(10208340-10208475)
chr2 (20-150)||(13830781-13830914)
chr2 (18-151)||(36128015-36128151)
chr2 (18-113)||(37472707-37472804)
chr2 (18-146)||(24414046-24414177)
chr2 (18-146)||(44746023-44746154)
chr2 (87-150)||(6027811-6027875)
chr2 (18-150)||(9632430-9632565)
chr2 (20-150)||(10920684-10920817)
chr2 (18-150)||(12193736-12193872)
chr2 (87-150)||(42797911-42797975)
chr2 (18-81)||(43371597-43371660)
chr2 (59-150)||(13705265-13705359)
chr2 (18-145)||(45115602-45115734)
chr2 (41-81)||(13954812-13954852)
chr2 (41-81)||(14096019-14096059)
chr2 (18-69)||(15546788-15546839)
chr2 (18-81)||(35248367-35248430)
chr2 (57-151)||(37999560-37999657)
chr2 (21-69)||(22900841-22900889)
chr2 (21-81)||(37309726-37309786)
[»] chr1 (35 HSPs)
chr1 (18-151)||(49250682-49250818)
chr1 (22-148)||(29871198-29871326)
chr1 (34-149)||(13390457-13390574)
chr1 (18-151)||(9982799-9982935)
chr1 (18-151)||(16408986-16409121)
chr1 (18-150)||(17134991-17135126)
chr1 (18-150)||(24710891-24711026)
chr1 (18-150)||(36187130-36187265)
chr1 (22-147)||(19572425-19572553)
chr1 (18-151)||(39616336-39616473)
chr1 (18-150)||(23968623-23968758)
chr1 (18-146)||(44615389-44615520)
chr1 (18-146)||(44793049-44793180)
chr1 (19-150)||(24236671-24236805)
chr1 (62-150)||(29936510-29936601)
chr1 (42-150)||(40087374-40087485)
chr1 (22-149)||(34611121-34611251)
chr1 (26-150)||(45866096-45866222)
chr1 (18-151)||(23490680-23490816)
chr1 (18-150)||(5181083-5181218)
chr1 (21-81)||(42439652-42439712)
chr1 (21-150)||(12495057-12495189)
chr1 (87-150)||(28298061-28298125)
chr1 (26-150)||(34673192-34673319)
chr1 (18-150)||(51421902-51422037)
chr1 (18-81)||(10778549-10778612)
chr1 (58-150)||(20774650-20774745)
chr1 (18-81)||(42707819-42707882)
chr1 (18-151)||(18353989-18354125)
chr1 (18-81)||(33293513-33293576)
chr1 (63-153)||(5283512-5283605)
chr1 (18-63)||(16433167-16433212)
chr1 (26-111)||(13798290-13798377)
chr1 (21-81)||(17091941-17092001)
chr1 (91-150)||(49740936-49740996)
[»] chr6 (25 HSPs)
chr6 (18-153)||(30986296-30986434)
chr6 (18-146)||(32853887-32854018)
chr6 (18-149)||(10187991-10188125)
chr6 (18-150)||(28079606-28079741)
chr6 (18-141)||(5863302-5863428)
chr6 (19-150)||(31496478-31496612)
chr6 (19-150)||(31501864-31501998)
chr6 (18-151)||(27534727-27534863)
chr6 (18-152)||(2367369-2367506)
chr6 (18-151)||(32053131-32053260)
chr6 (22-150)||(10142428-10142559)
chr6 (18-150)||(3483833-3483968)
chr6 (18-110)||(13769115-13769209)
chr6 (21-152)||(14255004-14255137)
chr6 (87-150)||(14506188-14506252)
chr6 (18-81)||(27738815-27738878)
chr6 (18-72)||(256483-256537)
chr6 (21-75)||(20349110-20349164)
chr6 (18-153)||(24225741-24225885)
chr6 (18-113)||(9442473-9442569)
chr6 (18-151)||(12678003-12678139)
chr6 (18-150)||(12141428-12141563)
chr6 (18-81)||(19367052-19367115)
chr6 (23-77)||(5108917-5108971)
chr6 (18-79)||(18908936-18908997)
[»] chr7 (45 HSPs)
chr7 (18-151)||(45885674-45885810)
chr7 (18-150)||(30650679-30650814)
chr7 (18-149)||(10072514-10072648)
chr7 (21-151)||(16866220-16866353)
chr7 (20-149)||(7780058-7780190)
chr7 (18-150)||(17885513-17885648)
chr7 (18-150)||(35074518-35074653)
chr7 (18-152)||(12980425-12980562)
chr7 (18-154)||(3226852-3226991)
chr7 (18-150)||(39317043-39317178)
chr7 (20-113)||(3157133-3157227)
chr7 (18-113)||(39455963-39456060)
chr7 (22-150)||(44734269-44734398)
chr7 (18-150)||(27850242-27850371)
chr7 (18-141)||(16079061-16079187)
chr7 (18-150)||(18825776-18825917)
chr7 (20-113)||(38152937-38153031)
chr7 (18-151)||(21702707-21702843)
chr7 (27-141)||(44658386-44658503)
chr7 (18-150)||(2630484-2630618)
chr7 (18-150)||(25905676-25905811)
chr7 (18-150)||(37218053-37218188)
chr7 (34-148)||(37195921-37196038)
chr7 (18-151)||(24753212-24753347)
chr7 (18-147)||(18125141-18125273)
chr7 (18-113)||(45380155-45380251)
chr7 (18-81)||(27896457-27896520)
chr7 (18-111)||(43507493-43507588)
chr7 (39-153)||(44985825-44985942)
chr7 (18-150)||(17851902-17852035)
chr7 (40-138)||(37579331-37579432)
chr7 (18-152)||(38139700-38139837)
chr7 (20-81)||(44845117-44845178)
chr7 (87-150)||(26004396-26004460)
chr7 (21-81)||(30839116-30839176)
chr7 (18-151)||(37182322-37182458)
chr7 (87-150)||(43550339-43550403)
chr7 (46-113)||(3774145-3774215)
chr7 (18-81)||(22973436-22973499)
chr7 (18-81)||(33841126-33841188)
chr7 (91-150)||(24425491-24425551)
chr7 (116-150)||(26623088-26623122)
chr7 (18-63)||(24425428-24425473)
chr7 (87-150)||(23457178-23457242)
chr7 (87-150)||(23533526-23533590)
[»] chr5 (32 HSPs)
chr5 (18-150)||(10127117-10127252)
chr5 (18-150)||(4920869-4921004)
chr5 (18-150)||(17853204-17853338)
chr5 (18-150)||(5908599-5908734)
chr5 (18-150)||(33727912-33728047)
chr5 (18-151)||(4583162-4583298)
chr5 (22-151)||(6155830-6155962)
chr5 (21-146)||(29245866-29245994)
chr5 (18-141)||(12866471-12866597)
chr5 (39-153)||(6369759-6369876)
chr5 (22-150)||(18207065-18207196)
chr5 (65-150)||(12447459-12447546)
chr5 (23-81)||(2412709-2412767)
chr5 (34-146)||(3564655-3564768)
chr5 (18-151)||(13401914-13402050)
chr5 (18-151)||(15890249-15890385)
chr5 (18-151)||(40517849-40517985)
chr5 (21-81)||(42987462-42987522)
chr5 (34-81)||(24207743-24207790)
chr5 (18-113)||(12834523-12834620)
chr5 (18-72)||(27900393-27900447)
chr5 (61-150)||(35311899-35311991)
chr5 (18-147)||(20973410-20973542)
chr5 (18-99)||(28568984-28569067)
chr5 (18-81)||(23044974-23045037)
chr5 (22-150)||(30996643-30996773)
chr5 (39-129)||(33420279-33420372)
chr5 (23-81)||(38972970-38973028)
chr5 (87-140)||(42717551-42717605)
chr5 (39-81)||(43523812-43523854)
chr5 (21-146)||(22694817-22694944)
chr5 (91-150)||(16311204-16311264)
[»] chr4 (35 HSPs)
chr4 (25-150)||(1724181-1724308)
chr4 (18-154)||(26564880-26565019)
chr4 (18-151)||(11028122-11028258)
chr4 (28-151)||(37349171-37349297)
chr4 (20-151)||(7985036-7985169)
chr4 (20-151)||(4741127-4741260)
chr4 (18-151)||(11122779-11122915)
chr4 (18-150)||(6382183-6382318)
chr4 (34-151)||(7334107-7334227)
chr4 (34-150)||(42299853-42299972)
chr4 (18-146)||(7609019-7609150)
chr4 (18-150)||(43893277-43893411)
chr4 (18-150)||(44317584-44317719)
chr4 (21-146)||(6481950-6482078)
chr4 (21-151)||(31918468-31918601)
chr4 (18-150)||(15987173-15987308)
chr4 (21-150)||(36919175-36919307)
chr4 (18-146)||(19548853-19548983)
chr4 (18-67)||(1724307-1724356)
chr4 (57-150)||(5902531-5902627)
chr4 (18-150)||(21423910-21424045)
chr4 (22-153)||(32585542-32585670)
chr4 (18-150)||(55826534-55826669)
chr4 (18-81)||(47550336-47550399)
chr4 (18-113)||(39375327-39375424)
chr4 (95-147)||(425890-425943)
chr4 (21-150)||(31752508-31752640)
chr4 (92-147)||(44887669-44887725)
chr4 (87-150)||(53906249-53906313)
chr4 (18-81)||(14605908-14605971)
chr4 (18-81)||(43309532-43309595)
chr4 (65-150)||(12825386-12825472)
chr4 (87-152)||(23927564-23927629)
chr4 (29-81)||(39086217-39086269)
chr4 (118-150)||(39188654-39188686)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-146)||(14098-14228)
[»] scaffold0795 (1 HSPs)
scaffold0795 (16-151)||(265-402)
[»] scaffold0027 (1 HSPs)
scaffold0027 (18-150)||(7740-7874)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-72)||(33436-33490)
[»] scaffold0007 (1 HSPs)
scaffold0007 (87-151)||(197258-197323)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-81)||(211407-211470)
[»] scaffold1118 (1 HSPs)
scaffold1118 (28-81)||(661-714)
[»] scaffold0008 (2 HSPs)
scaffold0008 (41-81)||(67815-67855)
scaffold0008 (41-81)||(75658-75698)


Alignment Details
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 24568985 - 24569203
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaa-cccgtcaaattaggtttggttcgg-tggata 119  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||| |||| || ||||||| ||||| |||||||||||||||||||||||| | ||||    
T  24568985 gtcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaatcaaacggggaaaacccgtcaaattaggtttggttcggatagata 24569084  T
Q  120 accacgggtatgagttttgttgtcatgcctaaattcctccttttatttgaaaaggcatatgtgccgagtttgaaaaattgttcctgtgtaaaaattttgg 219  Q
    | |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24569085 atcacatgtatgtgttttgttgtcatgcctaaattcctccttttatttgaaaaggcatatgtgccgagtttgaaaaattgttcctgtgttaaaattttgg 24569184  T
Q  220 ccatcaatatgccactcat 238  Q
    |||||||||||||||||||    
T  24569185 ccatcaatatgccactcat 24569203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 27932459 - 27932593
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt-gga 117  Q
    |||||||||||| |||| |||||||||||||||  || |||||||||||||| |||||||| || ||||| ||||||||||| ||||||||||||  ||     
T  27932459 cgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcggg 27932558  T
Q  118 taacca-cgggtatgagttttgttgtcatgcctaa 151  Q
    |||||  ||||||||||||||||||||||||||||    
T  27932559 taacccgcgggtatgagttttgttgtcatgcctaa 27932593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 20399635 - 20399770
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||| |||| ||||||||| |||||  ||||||||||||||||| ||||| ||||| || |||| ||||||||| ||||||||||| |     
T  20399635 acccgtcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgagc 20399734  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||  ||||||||| ||||||||    
T  20399735 gggtaaccacgggtattggttttgttgccatgccta 20399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 1012662 - 1012797
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||| |||||| | |||||||||||||  ||||| |||||||||||||| || |||||||| |||||||||||||| |||||| ||| |||    
T  1012662 acccgtcccatactcatgtttt-aaatcggggaaaacccaaactcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggtttgattcgggt 1012760  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||||||||||||  |||| ||| |||||||||    
T  1012761 gggtaaccacgggtatggattttattgccatgcctaa 1012797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 2075873 - 2075742
Alignment:
Q  24 cccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggtggataa 120  Q
    |||||||||||||| ||| |||||| ||||  || |||||||||||||| ||||||||   ||| ||| |||||||||| |||||||||| || || |||    
T  2075873 cccatacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaa 2075774  T
Q  121 ccacgggtatgagttttgttgtcatgcctaaa 152  Q
    |||||| |||||||||||||| ||||||||||    
T  2075773 ccacggatatgagttttgttgccatgcctaaa 2075742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 32303104 - 32303239
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||| ||| ||     
T  32303104 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgtttcgggc 32303203  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  32303204 gggtaaccacgggtatgggttttgttgccatgccta 32303239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 27777227 - 27777108
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg-tggataaccacgggtat 130  Q
    |||| |||||||||| |||| |||||| ||||||||||| ||||||||   ||| ||||||||||||||| ||||||||||| | | || |  |||||||    
T  27777227 tgttttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaaacggagaaaacccgtcaaattaagtttggttcggataggtacctgcgggtat 27777128  T
Q  131 gagttttgttgtcatgccta 150  Q
    ||||||||||||||||||||    
T  27777127 gagttttgttgtcatgccta 27777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 43113671 - 43113536
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||||| ||| |||| |||||||||| ||||  ||| | ||||| ||||| ||||||||  |||  |||||||| ||||| |||||||||||| |    
T  43113671 acccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggttcgggt 43113572  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||||||||| ||| ||||||||    
T  43113571 gggtaaccacgggtatgagttttattgccatgccta 43113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 17220760 - 17220892
Alignment:
Q  23 tcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcg-gtggata 119  Q
    |||||||||| |||| |||||||||||||||| || |||||||||||||||||||||||   | | |||||||||||||| | ||||||||| | || ||    
T  17220760 tcccatacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggttcgtgcgggta 17220859  T
Q  120 ac--cacgggtatgagttttgttgtcatgccta 150  Q
    ||  | |||||||  ||||||||||||||||||    
T  17220860 accgcgcgggtataggttttgttgtcatgccta 17220892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 29108867 - 29108770
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    |||||||||||||||||||| | |||||||| ||||  || |||||||||||||| ||||| ||||| || |||||||||||||| ||||||||||||    
T  29108867 acccgtcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 29108770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 37961003 - 37960872
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtggat 118  Q
    ||||||||||| |||| | |||||||||||||  ||||| |||||||||||  |||||||   ||  |||||| |||||||||||| ||||| ||||| |    
T  37961003 gtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtcaaaacgggaaaaacccatcaaattaggttcggttcgggtgggt 37960904  T
Q  119 aaccacgggtatgagttttgttgtcatgccta 150  Q
    ||| |||| ||||||||||| |||||||||||    
T  37960903 aactacggatatgagttttgatgtcatgccta 37960872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 24927992 - 24928127
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||| ||||||| ||||  || ||| |||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  24927992 acccgtctcatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 24928091  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| |||||||| ||||||||| ||||||||    
T  24928092 gggtaaccgcgggtatgggttttgttgccatgccta 24928127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 40248414 - 40248281
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtgg 116  Q
    ||||| ||||||| |||| |||||||||||||||   | |||||||||||||| ||||||||   ||  |||||||||||||| |||||||||| || |     
T  40248414 ccgtctcatacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcaggcga 40248315  T
Q  117 ataaccacgggtatgagttttgttgtcatgccta 150  Q
     ||||| |||||||| ||||||||||||| ||||    
T  40248314 gtaaccgcgggtatgggttttgttgtcataccta 40248281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 24870069 - 24869933
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||| ||||||| |||| | ||||||||||||| ||| | ||||||||||| |||||||||   ||  |||||||||||||| | |||| |||| |     
T  24870069 acccgtcacatacccgtgttttaaaatcggggaaaactcatagccatacccaaattcagtcaaaacgggaaaaacccgtcaaattggatttgattcgagc 24869970  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||  |||| || |||||||||||||||||||    
T  24869969 ggataaccgtgggtgtgggttttgttgtcatgcctaa 24869933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 45236108 - 45236192
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaatt 100  Q
    ||||||||||||||| |||| ||||||| ||||||| ||| |||||||| ||||||||||| ||||| || ||||||||||||||    
T  45236108 acccgtcccatacccgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaatt 45236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 1063627 - 1063694
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgcctaaat 153  Q
    |||||||||||||  ||||||||||||  || |||||||||||||||||||||||| |||||||||||    
T  1063627 aaacccgtcaaatcgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcctaaat 1063694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 5858697 - 5858566
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| | |||||||| ||||  ||||||||||||||||| || || ||||| || |||||||||||||| | |||||||| |||    
T  5858697 acccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggatttggttcgggt 5858598  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
     | ||||||| ||||||  |||||||| ||||    
T  5858597 aggtaaccacaggtatggattttgttgccatg 5858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 34139513 - 34139630
Alignment:
Q  41 aaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttg------gttcggt-ggataaccacgggtatg 131  Q
    |||||||||||||  ||||| ||||||||||| |||||||| |||||||| ||||||||||| ||||||      ||||||  |||||||||||||||||    
T  34139513 aaatcggggaaaac-caaacacatacccaaacccagtcaaaacgaggaaaacccgtcaaattgggtttgagtttggttcgggcggataaccacgggtatg 34139611  T
Q  132 agttttgttgtcatgccta 150  Q
    |||||||||||| ||||||    
T  34139612 agttttgttgtcgtgccta 34139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 34777142 - 34777238
Alignment:
Q  57 aaacccatacccaaactcagtcaaacgaggaaa--cccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||| ||||||||   |||||  ||||| ||||| ||||||||||||  || ||| |||||||||||||||||||| ||||||||    
T  34777142 aaacccatacccaaacccagtcaaaacgggaaaaacccgttaaattgggtttggttcggacgggtaatcacgggtatgagttttgttgccatgccta 34777238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 36131896 - 36131839
Alignment:
Q  94 tcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||    
T  36131896 tcaaattaggtttggttcgggtgggtaaccacggatatgaattttgttgtcatgccta 36131839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 4230772 - 4230678
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg 113  Q
    |||||||||||  |||| ||| |||||||||||  || |||||||||||||| ||||||||   | | |||||||||||||| ||||||||||||    
T  4230772 cgtcccatacctgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgg 4230678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 15173925 - 15173842
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaat 99  Q
    ||||||||| ||||| | || |||||||||| |||| |||||| ||||||||||| ||||||||   ||| |||||||||||||    
T  15173925 acccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaaat 15173842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 17469361 - 17469421
Alignment:
Q  91 ccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||| |||||||||| ||||| |||| ||||||||| ||||||||| ||||||||    
T  17469361 ccgtcaaattgggtttggttcgggtgggtaactacgggtatgggttttgttgccatgccta 17469421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 14155584 - 14155670
Alignment:
Q  27 atacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttc 111  Q
    |||||| |||| |||||||||| ||||  ||||| ||||||||||| |||||| ||  | | |||||||||||||| ||||||||||    
T  14155584 atacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgtcaaattgggtttggttc 14155670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 29416200 - 29416097
Alignment:
Q  50 aaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatg 146  Q
    |||| |||||| ||||||||||||||||| ||||| || |||||||||||||| | |||||||| ||||| || ||  | |||||| |||||||| ||||    
T  29416200 aaaagtcaaactcatacccaaactcagtcaaaacggggaaaacccgtcaaattggatttggttcgggtgggtacccgggagtatgaattttgttgccatg 29416101  T
Q  147 ccta 150  Q
    ||||    
T  29416100 ccta 29416097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 6388551 - 6388498
Alignment:
Q  28 tacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||| |||| | ||||||||||| |  ||||||||||||||||||||||||||    
T  6388551 tacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaa 6388498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 9642396 - 9642351
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaaccca 63  Q
    ||||||||||||||| |||| |||||||||||||||  ||||||||    
T  9642396 acccgtcccatacccgtgttttgaaatcggggaaaacccaaaccca 9642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 39445617 - 39445524
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    ||||||||||| |||| |||||||||| ||||  || ||||||||||||||  |||| ||||| || ||| ||||||||||  |||||||||||    
T  39445617 gtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaaaacggggaaaatccgtcaaattgagtttggttcgg 39445524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 14186454 - 14186486
Alignment:
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||| ||||||||||||||||||||||||    
T  14186454 taaccacgagtatgagttttgttgtcatgccta 14186486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 14687445 - 14687505
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||  |||| |||||||||||||||  |||| |||||||||||| || |||||    
T  14687445 cgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatcaaa 14687505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 4e-34; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 4557350 - 4557214
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||||||||||| ||||| |||||||||  ||||||||||||||||| ||||||||   ||  |||||||||||||| ||||| |||| |||    
T  4557350 acccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggttttgttcgggt 4557251  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||||||||||||||||||||||||||||||||    
T  4557250 gggtaaccacgggtatgagttttgttgtcatgcctaa 4557214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 49580107 - 49580243
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| | |||||||| ||     
T  49580107 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggc 49580206  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||||||||||| |||||||||||||||||||    
T  49580207 ggataaccacgggtatgggttttgttgtcatgcctaa 49580243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 4016087 - 4015954
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtgg 116  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||  |||||||   ||  ||||||||||||||  |||| |||| |||||    
T  4016087 ccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtcaaaacgggaaaaacccgtcaaattgagtttcgttcgggtgg 4015988  T
Q  117 ataaccacgggtatgagttttgttgtcatgccta 150  Q
     |||||||||||||| ||||||||| ||||||||    
T  4015987 gtaaccacgggtatgggttttgttgccatgccta 4015954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 29284379 - 29284515
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| ||||  || |||||| ||||  || |||||||||||||| ||||||||   ||| |||||||||||||| ||||||||||||      
T  29284379 acccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggc 29284478  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||||||||||||| |||||||||    
T  29284479 gggtaaccacgggtatgagttttgttgccatgcctaa 29284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 39655318 - 39655181
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||| || || ||||| || |||||||||||||| |||||||||| ||     
T  39655318 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggc 39655219  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    || |||||||||||||| ||||||||| ||||||||||    
T  39655218 gggtaaccacgggtatgggttttgttgccatgcctaaa 39655181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 44953480 - 44953345
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || ||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||| |     
T  44953480 acccgtcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagc 44953381  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||||||||||||| |||||||| ||||||||    
T  44953380 gggtaaccacgggtatgaattttgttgccatgccta 44953345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 52572652 - 52572788
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||| |||||| ||| |||||||||||||| ||||||||   | | ||||| ||||||||  ||||||||| ||     
T  52572652 acccgtcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggc 52572751  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  52572752 ggataaccacgggtatgggttttgttgccatgcctaa 52572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 7469823 - 7469688
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || ||| |||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  7469823 acccgtcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 7469724  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  7469723 gggtaaccacgggtatgggttttgttgccatgccta 7469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 22535886 - 22535754
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||| || |||| |||||| |||||||| ||| |||||||||||||| ||||| ||||| || |||||| |||||||  ||||||||| ||     
T  22535886 acccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggc 22535787  T
Q  115 ggataaccacgggtatgagttttgttgtcatgc 147  Q
    |||||||| |||||||| ||||||||| |||||    
T  22535786 ggataaccgcgggtatgggttttgttgccatgc 22535754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 48390862 - 48390726
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||| |||| |||||||||||||||  || |||||||||||||| ||||| ||||| || ||| |||||||||| | |||||||||       
T  48390862 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcgaac 48390763  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||| |||||||| ||||||||| |||||||||    
T  48390762 gggtaaccgcgggtatgggttttgttgccatgcctaa 48390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 10043327 - 10043195
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcggt- 114  Q
    |||||||||||||||||||| ||||| | |||||||  ||||||||||||||||| ||||||||   ||| |||||||||||||| || |||||  |||     
T  10043327 acccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaaagtggagaaaacccgtcaaattggggttggtatggtc 10043228  T
Q  115 ggataaccacgggtatgagttttgttgtcatgc 147  Q
    || || |||||| || |||| ||||||||||||    
T  10043227 gggtacccacggatacgagtattgttgtcatgc 10043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 44252793 - 44252925
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-tgga 117  Q
    |||||||||||| ||||  || |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||| |||||  ||     
T  44252793 cgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcggacggg 44252892  T
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||  |||||||| ||||||||    
T  44252893 taaccacgggtatggattttgttgccatgccta 44252925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 42758417 - 42758552
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcag-tcaaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||  |||| ||||||||||| |||  ||||| ||||||||||| ||| | ||||| || ||| |||||||||| ||||||| || ||     
T  42758417 acccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagttaaaacggggaaaatccgtcaaattgggtttggatcgggc 42758516  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  42758517 gggtaaccacgggtatgggttttgttgccatgccta 42758552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 44639317 - 44639454
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||||||||| |||| ||| ||  |||||||  || |||||||||||||| ||||||||   | | ||||| |||||||| ||||| ||||||      
T  44639317 acccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtcaaaatggggaaaaccagtcaaattgggtttcgttcggac 44639416  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    || ||||||||| |||||||||||||| ||||||||||    
T  44639417 gggtaaccacggatatgagttttgttgccatgcctaaa 44639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 48305679 - 48305550
Alignment:
Q  25 ccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcgg-tggataac 121  Q
    |||||||| |||| |||||| |||||||| ||| ||||||| |||||| ||||||||   ||  |||||||||| ||| |||||||||||| ||| ||||    
T  48305679 ccatacccgtgttttgaaattggggaaaactcatacccataaccaaacccagtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggtaac 48305580  T
Q  122 cacgggtatgagttttgttgtcatgcctaa 151  Q
    | ||||||||  ||||||||||||| ||||    
T  48305579 cgcgggtatggattttgttgtcatgtctaa 48305550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 53631947 - 53632083
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggtg 115  Q
    ||||||| ||||| | |||| | ||||  ||||||| ||||||||||||| | || || ||||| |||||||| |||||||||||| ||||||||||       
T  53631947 acccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccattcaaaacgaggaaaacccgtcaaattaagtttggttcgaac 53632046  T
Q  116 ga-taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||||||||| ||| |||||||||    
T  53632047 gagtaaccacgggtatgagttttattgccatgcctaa 53632083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 6738440 - 6738314
Alignment:
Q  28 tacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtggataaccac 124  Q
    ||||| |||| |||||||||||||||  || |||||||||||||| ||||||||   ||  ||||| |||||||| |||||||||| || || ||||| |    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgc 6738341  T
Q  125 gggtatgagttttgttgtcatgcctaa 151  Q
    ||||||| ||||| ||| |||||||||    
T  6738340 gggtatgggttttattgccatgcctaa 6738314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 19111782 - 19111912
Alignment:
Q  23 tcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttc-ggtggata 119  Q
    |||| ||||| |||| |||||||||| |||| |||||| ||||||||||| || |||||   |||||   |||||||||| | |||||||  ||||  ||    
T  19111782 tcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaaagggaaaaatccgtcaaattggatttggtttaggtgagta 19111881  T
Q  120 accacgggtatgagttttgttgtcatgccta 150  Q
    ||||||| |||||||||||||||||||||||    
T  19111882 accacggatatgagttttgttgtcatgccta 19111912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 10371277 - 10371183
Alignment:
Q  59 acccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcg-gtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||| |||||||| |||||||| || ||||| ||||||||||| ||||||||||| | || ||||||||||| || ||||||||||||||||||    
T  10371277 acccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtctgggttttgttgtcatgccta 10371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 30682889 - 30682998
Alignment:
Q  44 tcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcg-gtggataaccacgggtatgagttttgtt 140  Q
    |||||||||| ||| | |||| ||||||| ||||||||   ||| ||||| ||||||||| ||||| |||| ||| |||||  |||||||||||||||||    
T  30682889 tcggggaaaactcatatccattcccaaacccagtcaaaacagagaaaacctgtcaaattaagtttgattcgagtgaataactgcgggtatgagttttgtt 30682988  T
Q  141 gtcatgccta 150  Q
    ||||||||||    
T  30682989 gtcatgccta 30682998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 54317203 - 54317321
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataaccacgggtat 130  Q
    |||| ||||||||||||||| |||||| ||||| ||||| ||||| ||||| || |||||||||||||| | |||||||| || || ||||||||| |||    
T  54317203 tgttttgaaatcggggaaaactcaaacacatactcaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacggatat 54317302  T
Q  131 gagttttgttgtcatgcct 149  Q
    |  |||||||| |||||||    
T  54317303 ggattttgttgccatgcct 54317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 149
Target Start/End: Original strand, 831086 - 831179
Alignment:
Q  59 acccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgcct 149  Q
    |||||||||||||| |||||||| || ||||| ||||||||||| ||||||||| ||  || ||||||||| |||||||||||||||| |||||    
T  831086 acccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttggtttgggcgggtaaccacggatatgagttttgttgtcttgcct 831179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 23546954 - 23546857
Alignment:
Q  57 aaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcg-gtggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    |||||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||  | || |||||||||||||| ||||||||| |||||||||    
T  23546954 aaacccatacccaaacccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatgcctaa 23546857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 34025997 - 34026129
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||  |||| |||||||||||||||  || ||||||| |||||| ||||||||   ||  ||| |||||||||| | |||||||| ||     
T  34025997 acccgtcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttttggttcggga 34026096  T
Q  115 ggataaccacgggtatgagttttgttgtcatgc 147  Q
    || ||||| |||||||| ||||||||| |||||    
T  34026097 gggtaaccgcgggtatgggttttgttgccatgc 34026129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 30616326 - 30616263
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||| || |||| |||||||||||||||  ||||||||||| |||| |||||||||    
T  30616326 acccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatactcaaattcagtcaaa 30616263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 52198198 - 52198292
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggtt 110  Q
    ||||||||||||||  |||| ||| |||||| ||||  || |||||||||||||| ||||||||   ||  ||||||||||||||||||||||||    
T  52198198 acccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacagaaaaaacccgtcaaattaggtttggtt 52198292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 12369112 - 12369173
Alignment:
Q  91 ccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||||  ||||||||||| || ||||||||||||||| ||||||||| |||||||||    
T  12369112 ccgtcaaattgagtttggttcgggtgaataaccacgggtatgggttttgttgccatgcctaa 12369173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 23154109 - 23153978
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggtt-cggt 114  Q
    |||||| |||||||| |||| |||||||||||||||  || ||||||||||||||||||| |||   ||  |||||||||||||| || |||||| |||     
T  23154109 acccgttccatacccgtgtt-tgaaatcggggaaaacccatacccatacccaaactcagttaaaacgggaaaaacccgtcaaattggggttggttccggc 23154011  T
Q  115 ggataaccacgggtatgagttttgttgtcatgc 147  Q
    || ||||| ||| ||||  |||||||| |||||    
T  23154010 gggtaaccgcggatatggattttgttgccatgc 23153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 34119701 - 34119825
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggtgg 116  Q
    ||||| ||||||| |||| | |||||||| |||| |||||| ||||||||||| || |||||   | | |||||||||||||||| |||||||| |||||    
T  34119701 ccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatcaaaatggggaaaacccgtcaaattagatttggttcgggtgg 34119800  T
Q  117 ataaccacgggtatgagttttgttg 141  Q
     |||||||  | ||| |||||||||    
T  34119801 ttaaccacatggatgggttttgttg 34119825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 27252610 - 27252704
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg 113  Q
    ||||||| |||||||||| |||||| || ||||| |||||| ||||||||||| || |||||  |||  |||||||||||||||| ||| ||||||    
T  27252610 ccgtcccgtacccatgtt-tgaaattggagaaaactcaaactcatacccaaacccaatcaaatccgataaaacccgtcaaattagatttagttcgg 27252704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 42243438 - 42243525
Alignment:
Q  26 catacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttc 111  Q
    ||||||| |||  |||||||||| ||||  ||||| ||||||||||| |||||||||  | | |||||||||||||| ||||||||||    
T  42243438 catacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaacccgtcaaattgggtttggttc 42243525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 43582620 - 43582755
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||| ||||||| |||| ||||||||||||||| ||| || ||||| ||||| |||| |||   ||| |||||| ||||||| | |||||||| ||     
T  43582620 acccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaacccatcaaattggatttggttcgggc 43582719  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| ||| |||| |||||||||  |||||||    
T  43582720 gggtaaccgcggatatgggttttgttgcaatgccta 43582755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 34154465 - 34154520
Alignment:
Q  26 catacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||| |||||||||||||||  || ||||||| |||||| ||||||||    
T  34154465 catacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaaa 34154520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 39728758 - 39728849
Alignment:
Q  62 catacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||| |||||||| || |||||  |||||||||| | ||||||||||  || |||||||||||||| ||||||||| ||||||||    
T  39728758 catacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgccta 39728849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 44106834 - 44106704
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttc-ggtggat 118  Q
    |||||||||||| |||| | | || ||||||||  || || ||||||||||| ||||| ||||| ||||| ||||||||||  |||| |||| || || |    
T  44106834 cgtcccatacccgtgttttaagattggggaaaac-catactcatacccaaacccagtcaaaacggggaaaaccgtcaaattgagttttgttcgggcgggt 44106736  T
Q  119 aaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||| ||||||||| ||||||||    
T  44106735 aatcacgggtatgtgttttgttgccatgccta 44106704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 44172669 - 44172732
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||| ||||| ||||||||    
T  44172669 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaa 44172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 44179369 - 44179432
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||| ||||| ||||||||    
T  44179369 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaa 44179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 2490369 - 2490411
Alignment:
Q  39 tgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||    
T  2490369 tgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 3385897 - 3385804
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcgg 113  Q
    ||||| ||||| |||| |||||| ||  |||||||||| ||||||| |||| |||||||| || ||||| |||||| |||| ||||||||||||    
T  3385897 gtcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacccgtcgaattgggtttggttcgg 3385804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 29858574 - 29858485
Alignment:
Q  64 tacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||| |||||||| || |||||  |||| ||||| ||||||||||||  || |||||||||||||| ||||||||| ||||||||    
T  29858574 tacccaaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 29858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 30904861 - 30904734
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaacccgtcaaattaggtttggttcgg-tg 115  Q
    ||||||||| ||||| |||| ||||||| |  ||||  ||||| ||||||||||| |||| ||| || |||||||||||||||| | ||| ||||||  |    
T  30904861 acccgtcccgtacccgtgttttgaaatcagaaaaaagccaaactcatacccaaac-cagtaaaagcggggaaacccgtcaaattggatttagttcggacg 30904763  T
Q  116 gataaccacgggtatgagttttgttgtca 144  Q
    |||| || ||||||||  |||||||||||    
T  30904762 gatacccgcgggtatggattttgttgtca 30904734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 52200361 - 52200393
Alignment:
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||||||| ||||||||||||    
T  52200361 taaccacgggtatgagttttattgtcatgccta 52200393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 37106736 - 37106871
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||||||||||  || |||||||||||||||||||| ||||| || |||||||||||||| |||||||||| ||     
T  37106736 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 37106835  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| || ||||||||||||||||||||||||    
T  37106836 gggtaaccgcgagtatgagttttgttgtcatgccta 37106871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 12341648 - 12341780
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-tggat 118  Q
    ||||||||||  |||| |||||||||||||||  || |||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||  ||||    
T  12341648 gtcccatacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggat 12341747  T
Q  119 aaccacgggtatgagttttgttgtcatgcctaa 151  Q
    |||| |||||||||||||||||| |||||||||    
T  12341748 aaccgcgggtatgagttttgttgccatgcctaa 12341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 30846990 - 30847126
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  30846990 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 30847089  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  30847090 gggtaaccacgggtatgggttttgttgccatgcctaa 30847126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 10208475 - 10208340
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaacccgtcaaattaggtttggttcggt-g 115  Q
    ||||||||||||||| |||| | | || ||||||||  || |||||||||||||| |||||||| || ||||| |||||||||||  ||||||||||  |    
T  10208475 acccgtcccatacccgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaaccgtcaaattaactttggttcgggcg 10208376  T
Q  116 gataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||| |||||||||||||||||||| |||||||||    
T  10208375 gataatcacgggtatgagttttgttgccatgcctaa 10208340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 13830781 - 13830914
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggtgg 116  Q
    ||||||||||||| |||| ||| |||| ||||||  || |||||||||||||| ||||||||   | | |||||||||||||| |||||||||| || ||    
T  13830781 ccgtcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgg 13830880  T
Q  117 ataaccacgggtatgagttttgttgtcatgccta 150  Q
     |||||||||||||| ||||||||||||| ||||    
T  13830881 gtaaccacgggtatgggttttgttgtcataccta 13830914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 36128151 - 36128015
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcggtg 115  Q
    |||| |||||||||| ||||  || ||||||||||   || |||||||||||||| |||||||| || |||||  |||||||||||||||||||||||      
T  36128151 acccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggttcggac 36128052  T
Q  116 ga-taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  36128051 gagtaaccacgggtatgggttttgttgccatgcctaa 36128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 37472804 - 37472707
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    ||||||||||||||| |||| |||||||||||||||| || || ||||||||||| ||||| ||||| || ||||||||||||||  |||||||||||    
T  37472804 acccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgg 37472707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 24414177 - 24414046
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||   | |||||||||||||| || || ||||| || |||||||||||||| |||||||||| ||     
T  24414177 acccgtcccatacccgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggc 24414078  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || ||||||| |||||| ||||||||| ||||    
T  24414077 gggtaaccacaggtatgggttttgttgccatg 24414046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 44746154 - 44746023
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||  | |||| |||||||||||||||  |||| ||||||||||||||| || ||||| || |||||||||||||| |||||||| | |||    
T  44746154 acccgtcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatcaaaacggggaaaacccgtcaaattgggtttggtacgggt 44746055  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || |||||  || |||||||||||||| ||||    
T  44746054 gggtaaccgtggatatgagttttgttgccatg 44746023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 6027875 - 6027811
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  6027875 aaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatgccta 6027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 9632430 - 9632565
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||| ||||| || |||||   ||  ||||||||||||||  ||||||||| ||     
T  9632430 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggc 9632529  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  9632530 gggtaaccacgggtatgggttttgttgccatgccta 9632565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 10920684 - 10920817
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtgg 116  Q
    ||||||||||| | |||| ||| |||||  ||||| || |||||||||||||| ||||| ||||| || |||||  ||||||| | |||||||| || ||    
T  10920684 ccgtcccatactcgtgttttgagatcggaaaaaatccatacccatacccaaacccagtcaaaacggggaaaacctatcaaattggatttggttcgggcgg 10920783  T
Q  117 ataaccacgggtatgagttttgttgtcatgccta 150  Q
     |||||||||||||| ||||||||| ||||||||    
T  10920784 gtaaccacgggtatgggttttgttgccatgccta 10920817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 12193872 - 12193736
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||||| ||||  || || ||||||||||| ||||||||  ||   |||||||||||||| ||||||| || |||    
T  12193872 acccgtcccatacccgtgttctgaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggtttggctcgggt 12193773  T
Q  115 ggataac-cacgggtatgagttttgttgtcatgccta 150  Q
    || |||| | ||||||||  |||||||| ||||||||    
T  12193772 gggtaacgcgcgggtatggtttttgttgccatgccta 12193736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 42797975 - 42797911
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||| ||||||||||  || |||||||||||||| ||||||||| ||||||||    
T  42797975 aaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgccta 42797911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43371597 - 43371660
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||| ||||| | || | ||||||||||||| ||||||| |||||||||||||||||||    
T  43371597 acccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaaactcagtcaaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 13705359 - 13705265
Alignment:
Q  59 acccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| | |||||| || ||||| ||||||||||| ||| ||||||||  || |||||| ||||||||||||||||| ||||||||    
T  13705359 acccatacccaaaccctgtcaaaacggggaaaacccgtcaaattgggtatggttcggacgggtaaccatgggtatgagttttgttgccatgccta 13705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 45115602 - 45115734
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaa--cccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    ||||||| ||||||| |||| |||||||| |||||| ||| |  ||||||||||||| ||||| ||||| || |||||||||||||| | ||||||||||    
T  45115602 acccgtctcatacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgg 45115701  T
Q  114 tgga-taaccacgggtatgagttttgttgtcat 145  Q
       | ||||| |||||||| ||||| |||||||    
T  45115702 acaagtaaccgcgggtatgggttttattgtcat 45115734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 13954812 - 13954852
Alignment:
Q  41 aaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  13954812 aaatcggggaaaattcaaacacatacccaaacccagtcaaa 13954852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 14096019 - 14096059
Alignment:
Q  41 aaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  14096019 aaatcggggaaaattcaaacacatacccaaacccagtcaaa 14096059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 15546788 - 15546839
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccataccca 69  Q
    ||||||||||||||| |||| |||||||||||||||  ||||||||| ||||    
T  15546788 acccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgccca 15546839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 35248430 - 35248367
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| || ||||| ||||||  ||||||| |||||||||||| |||||    
T  35248430 acccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactcaatcaaa 35248367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 37999560 - 37999657
Alignment:
Q  57 aaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcggtgga-taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||||||| || ||||||||   | ||||||||||||||||   ||||||||||  || ||||||||| |||| ||||||||| |||||||||    
T  37999560 aaacccatacccatacccagtcaaaatgggggaaacccgtcaaattgaatttggttcgggcgactaaccacggatatgggttttgttgccatgcctaa 37999657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 22900841 - 22900889
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccataccca 69  Q
    |||||||||||| |||| |||||||||| ||||  ||||||||||||||    
T  22900841 cgtcccatacccgtgttttgaaatcgggaaaaacccaaacccataccca 22900889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 37309786 - 37309726
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||||  |||||| | | |||| |||||| |||||||||||| |||||||    
T  37309786 cgtcccatacccatgtattgaaattgagaaaaactcaaactcatacccaaacttagtcaaa 37309726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 49250818 - 49250682
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||||   ||| ||||||||||||||   |||||||| ||     
T  49250818 acccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgggc 49250719  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49250718 ggataaccacgggtatgaattttgttgtcatgcctaa 49250682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 29871326 - 29871198
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggtggata 119  Q
    |||||||||||||||| ||||||||| |||||  ||||| |||||||||||| ||||||| |||||||| |||||||||||  |||||||  | ||||||    
T  29871326 gtcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtcaaaacgaggaaaacccgtcaaattgagtttggtcggatggata 29871227  T
Q  120 accacgggtatgagttttgttgtcatgcc 148  Q
    |||||| ||||||||||||||||||||||    
T  29871226 accacgagtatgagttttgttgtcatgcc 29871198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 13390457 - 13390574
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttc-ggtggataaccacgggtatg 131  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||| |||||||||| || || |||||  |||||||    
T  13390457 tgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacggggaaacccgtcaaattgggtttggttcgggcgggtaaccgtgggtatg 13390556  T
Q  132 agttttgttgtcatgcct 149  Q
     ||||||||| |||||||    
T  13390557 ggttttgttgccatgcct 13390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 9982935 - 9982799
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcggtg 115  Q
    |||| |||||| ||| |||| |||||| ||||||||||||||| ||||||||||| ||||||||   ||| ||| || ||||||| | ||||||||||      
T  9982935 acccatcccattcccgtgttttgaaattggggaaaattcaaactcatacccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcggga 9982836  T
Q  116 ga-taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||||||||||||| |||||||||    
T  9982835 gagtaaccacgggtatgagttttgttgccatgcctaa 9982799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 16408986 - 16409121
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcggtg 115  Q
    ||||||||||||||| |||| |||||| ||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||| ||||  |    
T  16408986 acccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgattcgagg 16409085  T
Q  116 gataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    | |||||  | ||||| |||||||||||||||||||    
T  16409086 ggtaaccgtgtgtatgggttttgttgtcatgcctaa 16409121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 17134991 - 17135126
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||| ||||||| |||| |||||||||||||||  || ||||| |||||||| ||||||||   ||| ||| |||||||||| |||||||||| ||     
T  17134991 acccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaaaacagagaaaatccgtcaaattgggtttggttcgggc 17135090  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| |||||||| ||||||||| ||||||||    
T  17135091 gggtaaccgcgggtatgggttttgttgccatgccta 17135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 24710891 - 24711026
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || || |||| |||||| ||||| ||||| || ||||||||||||||   |||||||| |||    
T  24710891 acccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggt 24710990  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||| ||||||| || ||||||||||||||||||    
T  24710991 ggataatcacgggtgtgggttttgttgtcatgccta 24711026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 36187265 - 36187130
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||| ||||| ||||| || ||||||| ||||||  ||||||||| ||     
T  36187265 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgccaaattgagtttggttcgggc 36187166  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||| ||||||||| ||||||||| ||||||||    
T  36187165 gggtaacgacgggtatgggttttgttgccatgccta 36187130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 19572553 - 19572425
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggtggat 118  Q
    ||||||||||| |||| |||||||||| ||||  || |||||||||||||| ||||||||   | | ||||||||||||||||||||||||| || || |    
T  19572553 gtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattaggtttggttcgggcgggt 19572454  T
Q  119 aaccacgggtatgagttttgttgtcatgc 147  Q
    ||||||  ||||| ||||||||| |||||    
T  19572453 aaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 39616336 - 39616473
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||| |||||| |||| |||||| ||||||||  || || ||||||||||||||||| ||||| || |||| |||||||||  ||||||||| ||     
T  39616336 acccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttcgggc 39616435  T
Q  115 ggataaccac-gggtatgagttttgttgtcatgcctaa 151  Q
    || ||||| | |||||||||||||||||||||||||||    
T  39616436 gggtaaccgcggggtatgagttttgttgtcatgcctaa 39616473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 23968623 - 23968758
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||||| |||||||||  || |||||||||||||| || |||||   | | ||| |||||||||| |||||||||| ||     
T  23968623 acccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgggc 23968722  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| |||||||| ||||||||| ||||||||    
T  23968723 gggtaaccgcgggtatgggttttgttgccatgccta 23968758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 44615520 - 44615389
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggt-tcggt 114  Q
    ||||||||||||||| |||| | ||||| |||||||  ||||| ||||||||||| ||||||||   ||  ||||||||||||||  ||||||| | |||    
T  44615520 acccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggt 44615421  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || |||||||||||||| ||||||||| ||||    
T  44615420 gggtaaccacgggtatgggttttgttgccatg 44615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 44793049 - 44793180
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggt-tcggt 114  Q
    ||||||||||||||| |||| | ||||| |||||||  ||||| ||||||||||| ||||||||   ||  ||||||||||||||  ||||||| | |||    
T  44793049 acccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggtctgggt 44793148  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || |||||||||||||| ||||||||| ||||    
T  44793149 gggtaaccacgggtatgggttttgttgccatg 44793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 24236805 - 24236671
Alignment:
Q  19 cccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtg 115  Q
    ||||| |||||||| |||| ||| |||||||||||  || ||||||||| |||| ||||||||   ||  ||||||||||||||  ||||||||| || |    
T  24236805 cccgttccatacccgtgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcg 24236706  T
Q  116 gataaccacgggtatgagttttgttgtcatgccta 150  Q
    | |||||| ||||||||||||||||| ||||||||    
T  24236705 ggtaaccatgggtatgagttttgttgccatgccta 24236671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 29936510 - 29936601
Alignment:
Q  62 catacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||| ||||||| || ||||| ||||||||||| ||||||||||||  || |||||||||||||| ||||||||||||||||||    
T  29936510 catacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgccta 29936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 40087485 - 40087374
Alignment:
Q  42 aatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttg 138  Q
    |||||||||||| ||| ||||||||||||||||||||||| || |||||  ||||||||||   |||||||| |  |||||||| |||||||||||||||    
T  40087485 aatcggggaaaactcatacccatacccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataaccgcgggtatgagttttg 40087386  T
Q  139 ttgtcatgccta 150  Q
    ||| ||||||||    
T  40087385 ttgccatgccta 40087374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 34611121 - 34611251
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggat 118  Q
    ||||||||||| |||| ||| |||||| ||||  || ||||||||||||| ||| || ||||| || |||||||||||||| | |||||||| || || |    
T  34611121 gtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatttggttcaggcgggt 34611220  T
Q  119 aaccacgggtatgagttttgttgtcatgcct 149  Q
    |||||||||||||  ||||||||||||||||    
T  34611221 aaccacgggtatggattttgttgtcatgcct 34611251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 45866222 - 45866096
Alignment:
Q  26 catacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttc-ggtggataacca 123  Q
    ||||||| |||| |||||||||||||||  || ||||||||||||||  |||| ||| ||| ||||||||||| |||||||||| || || || |||||     
T  45866222 catacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaaaaggagaaaacccgtcaatttaggtttggctcgggcgggtaaccg 45866123  T
Q  124 cgggtatgagttttgttgtcatgccta 150  Q
    || ||||| ||||||||| ||||||||    
T  45866122 cgagtatgggttttgttgccatgccta 45866096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 23490816 - 23490680
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||||||||| ||||||||  |||  |||||||||||||| | |||||||| ||     
T  23490816 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggttcgggc 23490717  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||| | | ||||| ||||||||| |||||||||    
T  23490716 gggtaactatgagtatgggttttgttgccatgcctaa 23490680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 5181083 - 5181218
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| | || |||||||||||||||  || ||||||||| |||| ||||||||   | | ||||||||||||||   |||||||| ||     
T  5181083 acccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggttcgggc 5181182  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| |||||||| ||||||||| ||||||||    
T  5181183 gggtaaccgcgggtatgggttttgttgccatgccta 5181218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 42439712 - 42439652
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||||| ||| |||||  |||||||| |||||||||||||||||||||||    
T  42439712 cgtcccatacccatgttttgagatcggaaaaaattcatacccatacccaaactcagtcaaa 42439652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 12495057 - 12495189
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtgga 117  Q
    ||||||||| || |||| |||||||||| ||||   ||||||||||| |||| ||||||||   ||  ||| |||||||||| | |||||||| |||||     
T  12495057 cgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtcaaagtggggaaaatccgtcaaattggatttggttcaggtggg 12495156  T
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||  |||||| |||||||||||||||||    
T  12495157 taaccacatgtatgaattttgttgtcatgccta 12495189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 28298061 - 28298125
Alignment:
Q  87 aaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| | |||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  28298061 aaacccgtcaaattggatttggttcgggtgggtaaccacggatatgagttttgttgacatgccta 28298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 34673319 - 34673192
Alignment:
Q  26 catacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcggt-ggataacc 122  Q
    ||||||| |||| |||||| ||| ||||  ||||||||||||||||| |||| |||   ||  ||| |||| ||||| ||||||||||||  || ||| |    
T  34673319 catacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagttaaaatggggaaaatccgttaaattgggtttggttcgggcgggtaatc 34673220  T
Q  123 acgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||||||||||||||    
T  34673219 actggtatgagttttgttgtcatgccta 34673192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 51421902 - 51422037
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||| ||||  || |||||||||||||| ||||||||   | | |||||| ||||||| |||||||||| ||     
T  51421902 acccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggttcgggc 51422001  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||||||| ||||  |||| ||| ||||||||    
T  51422002 gggtaaccacggatatggattttattgccatgccta 51422037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 10778612 - 10778549
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| |||||||||| |||| | |||| ||||||||||| ||||||||    
T  10778612 acccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaa 10778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 20774650 - 20774745
Alignment:
Q  58 aacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||| |||||||||| || || |||||||| ||||| ||||||||| ||||||||    
T  20774650 aacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatgccta 20774745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 42707882 - 42707819
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| ||||||||| ||||| ||| || ||||||||||| ||||||||    
T  42707882 acccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 18354125 - 18353989
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||||||||||| |||||||||||||||  || |||||||  ||||  ||||||||   ||  ||||||||||||||   |||||||| ||     
T  18354125 acccgtcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaaaacgggaaaaacccgtcaaattgaatttggttcgggc 18354026  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||| | |||||| | ||||||||| |||||||||    
T  18354025 gggtaatcgcgggtacgggttttgttgccatgcctaa 18353989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 33293576 - 33293513
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| |||||||||| ||||  ||||| ||||||||||| || |||||    
T  33293576 acccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaa 33293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 153
Target Start/End: Complemental strand, 5283605 - 5283512
Alignment:
Q  63 atacccaaactcagtcaaacg--aggaaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgcctaaat 153  Q
    ||||||||||||||||||||   |  ||| || |||| || ||||||| |||| ||| || ||||| |||||||||||||||||||||||||||    
T  5283605 atacccaaactcagtcaaaccgaaaaaaatccatcaatttgggtttggctcggatgggtacccacgagtatgagttttgttgtcatgcctaaat 5283512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 16433212 - 16433167
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaaccca 63  Q
    ||||||||||||||| |||| ||||||||| ||||| |||||||||    
T  16433212 acccgtcccatacccgtgttttgaaatcggagaaaactcaaaccca 16433167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 13798290 - 13798377
Alignment:
Q  26 catacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttc 111  Q
    ||||||| |||| |||||||||| ||||  ||||| ||||||||||| |||||| ||  | | |||||||| ||||| ||||||||||    
T  13798290 catacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacccgttaaattgggtttggttc 13798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 17092001 - 17091941
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||  |||| | ||||||||||||| ||| || |||| |||||||||||||||    
T  17092001 cgtcccatacctgtgttataaaatcggggaaaactcatactcatatccaaactcagtcaaa 17091941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 49740996 - 49740936
Alignment:
Q  91 ccgtcaaattaggtttggttcg-gtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||  |||||||||  |||||||||||||||||||  |||||||| ||||||||    
T  49740996 ccgtcaaattgagtttggttcaagtggataaccacgggtatggattttgttgccatgccta 49740936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 30986296 - 30986434
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||||||||| ||||| || ||||||||||||||  ||||||||| ||     
T  30986296 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggttcgggc 30986395  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaat 153  Q
    || |||||||||||||| ||||||||| |||||||||||    
T  30986396 gggtaaccacgggtatgggttttgttgccatgcctaaat 30986434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 32853887 - 32854018
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || ||||||| |||||| ||||||||   ||| |||||||||||||| |||||||||||||     
T  32853887 acccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcggtc 32853986  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    ||||||||||||||||| ||||||||| ||||    
T  32853987 ggataaccacgggtatgggttttgttgccatg 32854018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 10188125 - 10187991
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  10188125 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 10188026  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcct 149  Q
    || |||||||||||||| ||||||||| |||||||    
T  10188025 gggtaaccacgggtatgggttttgttgccatgcct 10187991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 28079741 - 28079606
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaa--acccgtcaaattaggtttggt-tcggt 114  Q
    ||||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||| ||||   ||||  |||||||||| | |||||||| | |||    
T  28079741 acccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagccaaagcgggaaatacccgtcaaaatgggtttggtatgggt 28079642  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || || || |||||||| ||||||||||||||||||    
T  28079641 gggtacccgcgggtatgggttttgttgtcatgccta 28079606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 5863428 - 5863302
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  5863428 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 5863329  T
Q  115 ggataaccacgggtatgagttttgttg 141  Q
     | |||||||||||||| |||||||||    
T  5863328 aggtaaccacgggtatgggttttgttg 5863302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 31496478 - 31496612
Alignment:
Q  19 cccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-tg 115  Q
    |||||||||||||||||||  || ||||||||||| ||| |||||||||||||| ||||| ||||| || ||||||||||||||  |||||||| ||  |    
T  31496478 cccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacg 31496577  T
Q  116 gataaccacgggtatgagttttgttgtcatgccta 150  Q
    | |||||||||||||| ||||||||| ||||||||    
T  31496578 ggtaaccacgggtatgggttttgttgccatgccta 31496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 31501864 - 31501998
Alignment:
Q  19 cccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-tg 115  Q
    |||||||||||||||||||  || ||||||||||| ||| |||||||||||||| ||||| ||||| || ||||||||||||||  |||||||| ||  |    
T  31501864 cccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggtttggacg 31501963  T
Q  116 gataaccacgggtatgagttttgttgtcatgccta 150  Q
    | |||||||||||||| ||||||||| ||||||||    
T  31501964 ggtaaccacgggtatgggttttgttgccatgccta 31501998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 27534727 - 27534863
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||||||||| ||||  || ||||||||||| ||| |||||||||||||| || || ||||| || ||||||||||||||  |||||||||||      
T  27534727 acccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggac 27534826  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  27534827 ggttaaccacgggtatgggttttgttgccatgcctaa 27534863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 2367369 - 2367506
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || ||||||||||||||  |||||||   ||  |||||| ||||||| ||||||||||||      
T  2367369 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacctagtcaaaacgggaaaaacccatcaaattgggtttggttcggac 2367468  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    || ||||||||| |||| ||||||||| ||||||||||    
T  2367469 gggtaaccacggatatgggttttgttgccatgcctaaa 2367506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 32053131 - 32053260
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggtg 115  Q
    |||||||||||| ||||||| |||||||||||||||      ||||||||||||| |||||||| || ||||| ||||||||||| |||||||| ||| |    
T  32053131 acccgtcccatatccatgttttgaaatcggggaaaa------cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggtccggcg 32053224  T
Q  116 gataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||| |  ||||||| ||||||||| |||| ||||    
T  32053225 gataaacgtgggtatgggttttgttgccatgtctaa 32053260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 10142559 - 10142428
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcg-gtggat 118  Q
    ||||||||||| | || ||| |||||||||||  || |||||||||||||| ||||| |||||||| ||||||| ||||||  |||||||||| | ||||    
T  10142559 gtcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtttggttcgagcggat 10142460  T
Q  119 aaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||  ||||| ||||||||| ||||||||    
T  10142459 aaccacaagtatgggttttgttgccatgccta 10142428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 3483968 - 3483833
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||| |||||||||| ||||  || |||||||||||  || || ||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  3483968 acccatcccatacccgtgtttcgagatcggggaaaacccatacacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 3483869  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||| | ||||| ||||||||| ||||||||    
T  3483868 gggtaaccatgagtatgggttttgttgccatgccta 3483833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 13769115 - 13769209
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgag-gaaacccgtcaaattaggtttggtt 110  Q
    |||||||||||||||||||| |||| ||||||||||   ||||||||||| |||| |||||||| ||||  |||||||| ||||| |||||||||    
T  13769115 acccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggtttggtt 13769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 14255004 - 14255137
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcg-gtgga 117  Q
    |||||||||||| |||| ||||||| | ||||| |||||||||||||||||| ||||| |||||||| ||| | |||||| | |||||| |||| ||||     
T  14255004 cgtcccatacccgtgtt-tgaaatcagagaaaactcaaacccatacccaaacccagtcaaaacgaggaaaatctgtcaaaatgggtttgattcgagtggg 14255102  T
Q  118 taaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    |||||||| |||||  |||||||  ||||||||||    
T  14255103 taaccacgagtatggattttgttagcatgcctaaa 14255137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 14506188 - 14506252
Alignment:
Q  87 aaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||  |||| |||||| ||| |||||||||||||||||||| ||||||||||||    
T  14506188 aaacccgtcaaattgagtttcgttcggatggttaaccacgggtatgagttttattgtcatgccta 14506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 27738815 - 27738878
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| |||||||||||||||  || ||||||||| |||| ||||||||    
T  27738815 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacctaaacccagtcaaa 27738878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 256537 - 256483
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaac 72  Q
    ||||||| | |||||||||| ||||||||||||||| |||||| |||||||||||    
T  256537 acccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaaac 256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 20349110 - 20349164
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactca 75  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||| |||||||    
T  20349110 cgtcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaactca 20349164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 24225741 - 24225885
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-------aaacgaggaaaccc-gtcaaattaggtttggt 109  Q
    |||||||||||| || |||| ||| |||||||||||| || |||||||||||||| ||  |       ||||| ||||| || ||||||||   ||||||    
T  24225741 acccgtcccatatccgtgttttgagatcggggaaaatccatacccatacccaaacccaaacccaatcaaaacggggaaaacctgtcaaattgaatttggt 24225840  T
Q  110 tcggt-ggataaccacgggtatgagttttgttgtcatgcctaaat 153  Q
    ||||  || |||||| |||||||||||||||||||||||||||||    
T  24225841 tcggacgggtaaccatgggtatgagttttgttgtcatgcctaaat 24225885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 9442473 - 9442569
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    ||||||||||||||| |||| |||||||||| |||   || |||||||||||||| ||||| ||||| || ||||||||||||||  |||||||||||    
T  9442473 acccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaac-cagtcaaaacggggaaaacccgtcaaattgagtttggttcgg 9442569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 12678139 - 12678003
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||  |||  |||||||||||||||  ||||| ||||||||||| ||||||||   | | ||||| ||| |  |||||||||||| |||    
T  12678139 acccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaacccagtcaaaacggcgaaaacctgtcgagataggtttggttcaggt 12678040  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||||||| |||| | |||| || |||||||||    
T  12678039 gggtaaccacggttatgggatttgctgccatgcctaa 12678003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 12141428 - 12141563
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||| || |||| ||| || ||||||||  || |||| ||||||||| ||||| ||||| || ||||||||||||||   |||||||| ||     
T  12141428 acccgtcccatatccgtgttttgagattggggaaaacccatacccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggc 12141527  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||||  |||||| ||||||||| ||||||||    
T  12141528 gggtaaccataggtatgggttttgttgccatgccta 12141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 19367052 - 19367115
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||| ||||||| |||| | |||| ||||||||| || ||||||| |||||||||||||||    
T  19367052 acccgtctcatacccgtgttttaaaattggggaaaatccatacccatatccaaactcagtcaaa 19367115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 5108971 - 5108917
Alignment:
Q  23 tcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagt 77  Q
    |||||||| |||||| |||||||||| |||| ||||||||||||| |||| ||||    
T  5108971 tcccatacacatgttttgaaatcgggaaaaactcaaacccataccgaaacccagt 5108917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 18908936 - 18908997
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtca 79  Q
    |||||||||||| || | || |||||||||||||||  ||||| ||||| ||||||||||||    
T  18908936 acccgtcccatatccgtattttgaaatcggggaaaacccaaactcatactcaaactcagtca 18908997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 6e-27; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 45885810 - 45885674
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||||   ||| |||||||| ||||| ||||||||||| |     
T  45885810 acccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcgagc 45885711  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  45885710 gggtaaccacgggtatgggttttgttgccatgcctaa 45885674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 30650679 - 30650814
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| || |||||||| ||| ||||||||| |||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  30650679 acccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 30650778  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||||||||||||| ||||||||    
T  30650779 gggtaaccacgggtatgagttttgttgacatgccta 30650814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 10072514 - 10072648
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||| |||||||| |||| |||||||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  10072514 acccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 10072613  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcct 149  Q
    || ||||| |||||||| ||||||||| |||||||    
T  10072614 gggtaaccgcgggtatgggttttgttgccatgcct 10072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 16866220 - 16866353
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtgga 117  Q
    |||||||||||| |||| ||| |||||||||||  || ||||||| |||||| ||||| ||||| || |||||||||||||| |||||||||| || ||     
T  16866220 cgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcggg 16866319  T
Q  118 taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||| |||||||||||||| |||||||||    
T  16866320 taaccacggatatgagttttgttgccatgcctaa 16866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 7780058 - 7780190
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg-tgg 116  Q
    ||||||||||||| |||| ||| |||||||||||  || |||||||||||||| ||||| ||||| || ||| ||||||||||  ||||||||||| |||    
T  7780058 ccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgg 7780157  T
Q  117 ataaccacgggtatgagttttgttgtcatgcct 149  Q
     |||||||||||||| ||||||||| |||||||    
T  7780158 gtaaccacgggtatgggttttgttgccatgcct 7780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 17885513 - 17885648
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||||||||||| | |||||||||||||  || |||||||  ||||| ||||| ||||| || |||||||||||||| |||||||||| ||     
T  17885513 acccgtcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggc 17885612  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
     | |||||||||||||| ||||||||| ||||||||    
T  17885613 aggtaaccacgggtatgggttttgttgccatgccta 17885648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 35074518 - 35074653
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| | | |||||||||||  || |||||||||||||| ||||| ||||| || ||||||||| |||| |||||||||| ||     
T  35074518 acccgtcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggttcgggc 35074617  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  35074618 gggtaaccacgggtatgggttttgttgccatgccta 35074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 12980425 - 12980562
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||| |||| |||||||||||||||   |||||||||||||||| ||||||||   ||  |||||||| |||||  |||||||||  |     
T  12980425 acccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtcaaaatggggaaaacccgttaaattgagtttggttctagc 12980524  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    || |||||||||||||||||||||||| |||| |||||    
T  12980525 gggtaaccacgggtatgagttttgttgccatgtctaaa 12980562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 3226991 - 3226852
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcag-tcaaacgagg-aaacccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||||||||| |||| |||||||||||||||  || |||||||| ||||||||| | |||||||| ||| |||||||||| ||||||||||||      
T  3226991 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggttcggac 3226892  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaatt 154  Q
    || ||||| |  |||||  |||||||| ||||||||||||    
T  3226891 gggtaaccgcatgtatggattttgttgccatgcctaaatt 3226852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 39317043 - 39317178
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||| |||||| ||| || |||| |||||| ||||| ||||| || ||||||||||||||  ||||||||| ||     
T  39317043 acccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggc 39317142  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||| || |||||| |||||||| ||||||||    
T  39317143 ggataaccgcgagtatgaattttgttgccatgccta 39317178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 3157133 - 3157227
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaacccgtcaaattaggtttggttcgg 113  Q
    ||||||||||||||| || |||||||||||||||   ||||||||||||||||  ||||||| || ||||| ||| |||||||||||||||||||    
T  3157133 ccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtcaaagcggggaaaaccgacaaattaggtttggttcgg 3157227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 39456060 - 39455963
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcgg 113  Q
    |||||||||||||||||||| |||||||||||||||  || | |||||||||||| ||||| ||||| || |||| ||||||||| ||||||||||||    
T  39456060 acccgtcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgg 39455963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 44734398 - 44734269
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaacccgtcaaattaggtttggttc-ggtggataa 120  Q
    ||||||||||| |||| |||||||| | ||||  || || ||| ||||||| |||||||| | | |||||||||||||| |||||||||| || || |||    
T  44734398 gtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaaagggaaaacccgtcaaattgggtttggttcgggcgggtaa 44734299  T
Q  121 ccacgggtatgagttttgttgtcatgccta 150  Q
    || || ||||||||||||||| ||||||||    
T  44734298 ccgcgagtatgagttttgttgccatgccta 44734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 27850371 - 27850242
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| |||| |||||||||||||||      ||||||||||||| || ||||| || |||||  |||||||||| ||||||||||||      
T  27850371 acccgtcccatacccgtgttttgaaatcggggaaaa------cccatacccaaacccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggc 27850278  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||||||| |||||||||||||| ||||||||    
T  27850277 gggtaaccacggatatgagttttgttgccatgccta 27850242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 16079061 - 16079187
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| ||||| |||||  |||||  |||||||||||||||||||  |||  |||| |||||||||||||||| ||| ||     
T  16079061 acccgtcccatacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtcaaaaccgaaaaaactcgtcaaattaggtttgcttcgggc 16079160  T
Q  115 ggataaccacgggtatgagttttgttg 141  Q
    || |||||||| ||||| |||||||||    
T  16079161 gggtaaccacgagtatgggttttgttg 16079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 18825917 - 18825776
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccataccc------aaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggt 109  Q
    ||||||||||||||| |||| |||||||||||||||  |||||||| ||||      |||| |||||||| || ||||| ||||||||||| ||||||||    
T  18825917 acccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 18825818  T
Q  110 tcgg-tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||  || |||||| ||||||| ||||||||| ||||||||    
T  18825817 tcggacggttaaccatgggtatgggttttgttgccatgccta 18825776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 38152937 - 38153031
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttcgg 113  Q
    |||| ||||||||||||| |||||||||||||||  || |||||||||||||| ||||| ||||| | ||| ||||||||||  |||||||||||    
T  38152937 ccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaatccgtcaaattgagtttggttcgg 38153031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 21702707 - 21702843
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || || ||||||||||| ||||||||   |||||   |||||||||| |||||||||| ||     
T  21702707 acccgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgggc 21702806  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||||||| |||| ||||||||| |||||||||    
T  21702807 gggtaaccacggatatgggttttgttgccatgcctaa 21702843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 44658503 - 44658386
Alignment:
Q  27 atacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataacca 123  Q
    |||||| |||| |||||||||| |||| ||| |||||||||||||| ||||| |||||||| |||||||||||||| | |||||||| ||  | |||||     
T  44658503 atacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggttcgggcaggtaaccg 44658404  T
Q  124 cgggtatgagttttgttg 141  Q
    |||||||| |||||||||    
T  44658403 cgggtatgggttttgttg 44658386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 2630618 - 2630484
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttgg-ttcggt 114  Q
    |||||||||||||||||||| | |||||||||||||  ||||||||||||||||| |||| |||   ||  |||| ||||||||| ||||||| || |||    
T  2630618 acccgtcccatacccatgtttt-aaatcggggaaaacccaaacccatacccaaacccagtaaaaatgggtaaaacacgtcaaattgggtttggtttgggt 2630520  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
     | || ||| ||||||  ||||||||||||||||||    
T  2630519 aggtatccatgggtatcggttttgttgtcatgccta 2630484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 25905676 - 25905811
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc--aaacgaggaaacccgtcaaattaggtttggttcg-gt 114  Q
    ||||||||||||||  |||| ||| || ||||||||  || |||||||||||||| |||||  ||| | | ||||| |||||||| ||||| ||||| |     
T  25905676 acccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaattgggtttagttcgagc 25905775  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  25905776 gggtaaccacgggtatgggttttgttgccatgccta 25905811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 37218053 - 37218188
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcgg-t 114  Q
    ||||||||| ||||  |||| |||||| ||  |||| |||||| ||||||||||| |||||||| || ||||| ||| |||||||  ||||||||||| |    
T  37218053 acccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggttcgggt 37218152  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || || || | |||||||||||||||||||||||||    
T  37218153 gggtatccgctggtatgagttttgttgtcatgccta 37218188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 37196038 - 37195921
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttgg-ttcggtggataaccacgggtat 130  Q
    |||| |||||||||||||||| || ||||||||||||||  | |||||  |||  ||| ||||||||||  |||||| || || ||||||||||||||||    
T  37196038 tgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaaattgagtttggtttgggcggataaccacgggtat 37195939  T
Q  131 gagttttgttgtcatgcc 148  Q
    |  |||||||||||||||    
T  37195938 ggattttgttgtcatgcc 37195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 24753212 - 24753347
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| |||| ||| |||||| ||||  || ||||||| |||||| ||||||||   ||| ||| ||||||||||   ||||||||||      
T  24753212 acccgtcccatacccgtgttttgagatcggg-aaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggac 24753310  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  24753311 gggtaaccacgggtatgggttttgttgccatgcctaa 24753347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 18125273 - 18125141
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggtg 115  Q
    ||||||||||||||| ||||  || |||||| ||||  || || ||||| ||||| |||||||| || ||||| ||||||||||| | ||||||||||      
T  18125273 acccgtcccatacccgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggc 18125174  T
Q  116 ga-taaccacgggtatgagttttgttgtcatgc 147  Q
    || ||||||||| ||||| ||||||||||||||    
T  18125173 gagtaaccacggatatgaattttgttgtcatgc 18125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 45380155 - 45380251
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttcgg 113  Q
    ||||||||||||||| | || |||||||||| ||||  || ||||||| |||||| ||||| ||||  ||||| |||||||||| ||||||||||||    
T  45380155 acccgtcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaacagggaaaaccgtcaaattgggtttggttcgg 45380251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 27896520 - 27896457
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||||||||| ||||||  |||||||  ||||||||||||||||| || |||||    
T  27896520 acccgtcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaaa 27896457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 43507493 - 43507588
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc 111  Q
    ||||||| |||||||||||| |||||||||||||||  || ||  |||||||||| ||||| ||||| || |||||| ||||||| ||||||||||    
T  43507493 acccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaacggggaaaacccatcaaattgggtttggttc 43507588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 44985942 - 44985825
Alignment:
Q  39 tgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagtt 135  Q
    ||||||||| |||||  || | |||||||||||| || |||||   ||| ||| |||||||||||| |||||||||| ||| ||||| || |||||||||    
T  44985942 tgaaatcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcggatgggtaaccgcgagtatgagtt 44985843  T
Q  136 ttgttgtcatgcctaaat 153  Q
    ||||||  ||||||||||    
T  44985842 ttgttgcaatgcctaaat 44985825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 17851902 - 17852035
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  ||  ||||||||||  || |||||||||||||| ||||||||   ||| ||| || ||||||| |||||||||| ||     
T  17851902 acccgtcccatacccgtgttaaga--tcggggaaaacccatacccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggc 17851999  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||  ||||| ||||||||| ||||||||    
T  17852000 gggtaaccacaagtatgggttttgttgccatgccta 17852035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 37579331 - 37579432
Alignment:
Q  40 gaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttt 136  Q
    ||||||||| ||||| |||||||||||||||||  |||| ||||| || ||||||||| |||| |||||||||| || || |||||||| ||||| ||||    
T  37579331 gaaatcgggaaaaatccaaacccatacccaaacctagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgcgtatgggttt 37579430  T
Q  137 tg 138  Q
    ||    
T  37579431 tg 37579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 38139837 - 38139700
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||| | |||| |||||| ||||||||  || ||||||| |||||| ||||| ||||| || ||| || ||||||| |||||||||| ||     
T  38139837 acccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtttggttcgggc 38139738  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    || ||||| ||| |||| ||||| ||| ||||||||||    
T  38139737 gggtaaccgcggatatgggttttcttgccatgcctaaa 38139700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 44845178 - 44845117
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||| ||||| | || |||||||||||||||  |||||||||||| |||||||||||||    
T  44845178 ccgtcccgtacccgtattatgaaatcggggaaaacccaaacccataccaaaactcagtcaaa 44845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 26004460 - 26004396
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||| |||||||  |||||||||||  || |||||||||||||||||||||||| ||||||||    
T  26004460 aaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatgccta 26004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 30839176 - 30839116
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||| | || ||||||| ||||||| |||||| ||||||||||| ||||||||    
T  30839176 cgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 37182322 - 37182458
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||| |||| |||||  || || ||||||||||| ||||| ||||| || ||||||||||||||  ||||| ||| ||     
T  37182322 acccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttgattcgggc 37182421  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||| ||| |||| ||||||||| || ||||||    
T  37182422 gggtaaccgcggatatgggttttgttgccacgcctaa 37182458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 43550403 - 43550339
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||||||||| ||| |  || || |||||| |||||||||||||||||||||||    
T  43550403 aaacccgtcaaattaggtttgattcagacgggtatccacggatatgagttttgttgtcatgccta 43550339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 3774145 - 3774215
Alignment:
Q  46 ggggaaaattcaaacccata-cccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttcgg 113  Q
    |||||||| ||||||||||| ||||||||||||||||  ||||||   || ||||||||||||||||||||    
T  3774145 ggggaaaactcaaacccataacccaaactcagtcaaagcaggaaaaatccatcaaattaggtttggttcgg 3774215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 22973436 - 22973499
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||| ||||| | || |||||||| ||||||  ||||||||||||||||| ||||||||    
T  22973436 acccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 33841126 - 33841188
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| ||||||||||||||| |||||  ||||| ||||| ||||||||    
T  33841126 acccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaac-cagtcaaa 33841188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 24425491 - 24425551
Alignment:
Q  91 ccgtcaaattaggtttggttcgg--tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||| ||||||||||||  ||| |||||||| ||||||||||||||| ||||||||    
T  24425491 ccgtcaaattgggtttggttcgggctgg-taaccacgtgtatgagttttgttgccatgccta 24425551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Original strand, 26623088 - 26623122
Alignment:
Q  116 gataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||| |||||||||||||||||||||||||||||    
T  26623088 gataaacacgggtatgagttttgttgtcatgccta 26623122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 24425428 - 24425473
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaaccca 63  Q
    ||||||||||||||| |||| ||||||| | |||||||||||||||    
T  24425428 acccgtcccatacccgtgttttgaaatcagagaaaattcaaaccca 24425473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 23457178 - 23457242
Alignment:
Q  87 aaacccgtcaaattaggtttggttcg-gtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| ||||||||||| | || || || |||||||||||||||||  ||||||||    
T  23457178 aaacccgtcaaattgggtttggttcgagagggtacccgcgggtatgagttttgtttacatgccta 23457242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 23533590 - 23533526
Alignment:
Q  87 aaacccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| |||||||||| || || || || ||||||||  |||||||||||||||||    
T  23533590 aaacccgtcaaattgggtttggttcgggagggtacccgcgggtatggattttgttgtcatgccta 23533526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 10127117 - 10127252
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||| ||||| ||||| || |||||||||||||| | |||||||| ||     
T  10127117 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggc 10127216  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||||  |||||||||||||||||    
T  10127217 ggataaccacgggtatggattttgttgtcatgccta 10127252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 4920869 - 4921004
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || ||||||| |||||| ||||||||   ||| |||||||||||||| |||||||||| ||     
T  4920869 acccgtcccatacccgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggc 4920968  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  4920969 gggtaaccacgggtatgggttttgttgccatgccta 4921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 17853338 - 17853204
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||||||||||  || | |||||||||||| || ||||| || ||||| |||||||||||||||||||||| |||    
T  17853338 acccgtcccatacccgtgtt-tgaaatcggggaaaacccatatccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcaggt 17853240  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| |||||||| ||||||||| ||||||||    
T  17853239 gggtaaccgcgggtatgcgttttgttgccatgccta 17853204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 5908734 - 5908599
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || ||||||||||| ||| |||||||||||||| || |||||   | | |||||||||||||| |||||||||| ||     
T  5908734 acccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgggc 5908635  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||||  |||||||| ||||||||    
T  5908634 ggataaccacgggtatggattttgttgccatgccta 5908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 33728047 - 33727912
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||| || ||||||| |||||| || || ||||| || ||| |||||||||| |||||||||| ||     
T  33728047 acccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccgtcaaattgggtttggttcgggc 33727948  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  33727947 gggtaaccacgggtatgggttttgttgccatgccta 33727912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 4583162 - 4583298
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| |||||||||||||||  || ||||||| |||||| || || ||||| || |||||||||||||| |||||||||| ||     
T  4583162 acccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggc 4583261  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||  || |||||||||||||| |||||||||    
T  4583262 gggtaaccgtggatatgagttttgttgccatgcctaa 4583298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 151
Target Start/End: Complemental strand, 6155962 - 6155830
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacg-aggaaacccgtcaaattaggtttggttc-ggtggat 118  Q
    |||| |||||| |||| |||||||||||||||  ||||| ||||||||||| ||||| ||||| || |||||||| ||||| | |||||| | |||||||    
T  6155962 gtcctatacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggtacgggtggat 6155863  T
Q  119 aaccacgggtatgagttttgttgtcatgcctaa 151  Q
    |||| | |||||||||||||||| |||||||||    
T  6155862 aaccgcaggtatgagttttgttgccatgcctaa 6155830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 29245994 - 29245866
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtgga 117  Q
    |||||||||||| |||| ||||||||| ||||| ||| ||||||||||||||  |||| ||||| || ||||||||||||||  ||||||||| || ||     
T  29245994 cgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggg 29245895  T
Q  118 taaccacgggtatgagttttgttgtcatg 146  Q
    ||||| |||||||| ||||||||||||||    
T  29245894 taaccgcgggtatgggttttgttgtcatg 29245866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 12866597 - 12866471
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg-t 114  Q
    |||||||||||||||||||| ||||||||| ||||| ||| |||||||||||||| ||||||||   | | |||||||||||||| | ||||||||||      
T  12866597 acccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggttcggac 12866498  T
Q  115 ggataaccacgggtatgagttttgttg 141  Q
    || |||||||  ||||| |||||||||    
T  12866497 gggtaaccacatgtatgggttttgttg 12866471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 6369759 - 6369876
Alignment:
Q  39 tgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaac-ccgtcaaattaggtttggttcg-gtggataaccacgggtatgagtt 135  Q
    ||||||| ||||||| ||| |||||| |||||||||| ||||| |||| |||  |||||||||||||||||||||| | || ||||||    ||||||||    
T  6369759 tgaaatcagggaaaactcatacccatgcccaaactcaatcaaaacgagaaaaaaccgtcaaattaggtttggttcgagcgggtaaccataaatatgagtt 6369858  T
Q  136 ttgttgtcatgcctaaat 153  Q
    ||||||||||||||||||    
T  6369859 ttgttgtcatgcctaaat 6369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 18207065 - 18207196
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaa--cccgtcaaattaggtttggttcgg-tggat 118  Q
    ||||||||| |  ||| |||||||| ||||||  ||||| ||| ||||||| ||||||||   |||||  | ||||||||| ||||||||| || ||| |    
T  18207065 gtcccatacacgagttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttgggtgggt 18207164  T
Q  119 aaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||||||||||| ||||||||    
T  18207165 aaccacgggtatgagttttgttgccatgccta 18207196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 12447459 - 12447546
Alignment:
Q  65 acccaaactcagtcaaac-gaggaaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||| ||||||||  | ||||| |||||||||| |||||||||||| ||| |||||||||||||| ||||||||| ||||||||    
T  12447459 acccaaacccagtcaaaatggggaaatccgtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgttgccatgccta 12447546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 2412767 - 2412709
Alignment:
Q  23 tcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||||||||| |||||    
T  2412767 tcccatacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaa 2412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 3564768 - 3564655
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttcggtggataaccacgggtatga 132  Q
    |||| ||||||||| |||||| || |||||||||||||| ||||| ||||| | |||||||||||||| | ||||||||||  |  |||| || |||||     
T  3564768 tgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaacgggaaaacccgtcaaattggatttggttcgggcgggaaccgcgagtatgg 3564669  T
Q  133 gttttgttgtcatg 146  Q
     |||||||||||||    
T  3564668 attttgttgtcatg 3564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 13402050 - 13401914
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||| |||||||| ||||   |||||||| |||| ||| ||||||||||||||  |||||||   ||  ||| |||||||||| |||||||||| ||     
T  13402050 acccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggc 13401951  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||| |||||||| ||||||||| |||||||||    
T  13401950 gggtaaccgcgggtatgggttttgttgccatgcctaa 13401914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 15890249 - 15890385
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||||||||| |||||  || || |||| ||||||  |||||||   ||  |||||||||||||| | |||||||| ||     
T  15890249 acccgtcccatacccgtgttttgaaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggttcgggc 15890348  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || ||||| || ||||| |||||||||||||||||||    
T  15890349 gggtaaccgcgagtatgggttttgttgtcatgcctaa 15890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 40517849 - 40517985
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttc-ggt 114  Q
    |||| |||||||||| |||| ||  |||||||||||  || |||||||||||||| ||||||||   |||||   ||||||||||   |||||||| ||     
T  40517849 acccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattgaatttggttcaggc 40517948  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||| ||||||||| |||||||||    
T  40517949 gggtaaccacgggtatgggttttgttgccatgcctaa 40517985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 42987522 - 42987462
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||| |||| ||| |||||||||||| || |||| ||||||||||||||||||    
T  42987522 cgtcccatacccgtgttttgagatcggggaaaatccatacccgtacccaaactcagtcaaa 42987462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 24207743 - 24207790
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |||||    
T  24207743 tgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaa 24207790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 12834620 - 12834523
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttcgg 113  Q
    |||||||||||| ||||||| |||||| || |||||  || |||||||||||||| ||||||||   | | ||||||||||||||  |||||||||||    
T  12834620 acccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcgg 12834523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 27900447 - 27900393
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaac 72  Q
    |||||||||||||||||||| |||||||||| |||| ||||||| ||| ||||||    
T  27900447 acccgtcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaac 27900393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 35311899 - 35311991
Alignment:
Q  61 ccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||||||||   ||  ||| |||||||||| ||||||||||||  || ||||| ||| |||||||||| ||||||||||||    
T  35311899 ccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcggatatgagttttattgtcatgccta 35311991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 20973542 - 20973410
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    |||| |||||||||| ||||   |||||||||||||  || ||||||| |||||| ||||| ||||| || |||||||||| | | |||||||||| ||     
T  20973542 acccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcagaatgggtttggttcgggc 20973443  T
Q  115 ggataaccacgggtatgagttttgttgtcatgc 147  Q
    || ||||| |||||||| ||||||||| |||||    
T  20973442 gggtaaccgcgggtatgggttttgttgccatgc 20973410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 28569067 - 28568984
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaat 99  Q
    ||||||||| |||||   || |||||||||||||||| ||||| ||||||||||| ||||||||  |||  |||||||||||||    
T  28569067 acccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtcaaatcagggaaaacccgtcaaat 28568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 23045037 - 23044974
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||| |||| ||||| | || |||||||||||||||   |||||||||||||||||||||||||    
T  23045037 acccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaa 23044974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 30996643 - 30996773
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgaggaaacccgtcaaattaggtttggttcgg-tggata 119  Q
    ||||||||| | |||| | ||||||| |||||  || || ||||||||||| ||||| ||||| | ||| |||||||||| ||||||||||||  |||||    
T  30996643 gtcccatactcgtgttttaaaatcggagaaaacccatactcatacccaaacccagtcaaaacgggaaaatccgtcaaattgggtttggttcggacggata 30996742  T
Q  120 accacgggtatgagttttgttgtcatgccta 150  Q
    |||   | |||| ||||||||| ||||||||    
T  30996743 accgtagatatgggttttgttgccatgccta 30996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 33420372 - 33420279
Alignment:
Q  39 tgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaa--cccgtcaaattaggtttggttcgg-tggataaccacgggta 129  Q
    ||||||| || ||||| ||||| ||||| ||||| || |||||   |||||  ||||||||| |||||||||||||| ||||||||||||||||    
T  33420372 tgaaatcaggaaaaatccaaactcatactcaaacccaatcaaaatgggaaatacccgtcaaaataggtttggttcggatggataaccacgggta 33420279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 38972970 - 38973028
Alignment:
Q  23 tcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||||||||| ||||  ||||| |||||| |||| ||||||||    
T  38972970 tcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaacccagtcaaa 38973028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 42717605 - 42717551
Alignment:
Q  87 aaacccgtcaaattaggtttggttcgg-tggataaccacgggtatgagttttgtt 140  Q
    |||||||||||||| ||||||||||||  || ||||||| |||||||||||||||    
T  42717605 aaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 43523812 - 43523854
Alignment:
Q  39 tgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  43523812 tgaaatcggggaaaacccaaactcatacccaaactcagtcaaa 43523854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 22694944 - 22694817
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttcggt-gga 117  Q
    |||||||||||| | || ||| ||||||||||   || |||||||||||||| |||| |||   |||||   |||||||||| ||||||||||||  ||     
T  22694944 cgtcccatacccgtattttgagatcggggaaacc-catacccatacccaaacccagttaaaacgggaaaattccgtcaaattgggtttggttcgggcggg 22694846  T
Q  118 taaccacgggtatgagttttgttgtcatg 146  Q
    |||||||||||||| ||||||||| ||||    
T  22694845 taaccacgggtatgggttttgttgccatg 22694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 16311264 - 16311204
Alignment:
Q  91 ccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||||||||| || || || || ||| ||||||||||||||| |||||||    
T  16311264 ccgtcaaattaggtttggttcaggcgggtacccgcggatatgagttttgttgttatgccta 16311204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 1724308 - 1724181
Alignment:
Q  25 ccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg-aaacccgtcaaattaggtttggttc-ggtggataacc 122  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||| || |||| |||||||||  ||||||||| ||||| ||| |    
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaacggggaaaacacgtcaaattgagtttggttcgggtgggtaaac 1724209  T
Q  123 acgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||||||  ||||||||    
T  1724208 acgggtatgagttttgttaccatgccta 1724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 26564880 - 26565019
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacg-aggaaacccgtcaaattaggtttggttc-ggt 114  Q
    |||||||||||||||  ||| ||||||||||||||  |||||| ||||||||||| ||||| ||||| || ||| |||||||||| | |||||||| |||    
T  26564880 acccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtcaaaacgaagaaaatccgtcaaattggatttggttcgggt 26564979  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaaatt 154  Q
    || |||||||||||||| ||||||||| ||||||||||||    
T  26564980 gggtaaccacgggtatgggttttgttgccatgcctaaatt 26565019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 11028122 - 11028258
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| |||||||||||  || |||||||||||||  ||||||||   ||| |||||||||||||| |||||||||| |||    
T  11028122 acccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggt 11028221  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||| ||||| ||||||||| |||||||||    
T  11028222 gggtaaccacgtgtatgggttttgttgccatgcctaa 11028258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 37349171 - 37349297
Alignment:
Q  28 tacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtggataaccac 124  Q
    ||||| |||| ||||||||||||||| |||||| ||||||||||| ||||| ||||| || ||||| |||||||| |||||||||| || || |||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccac 37349270  T
Q  125 gggtatgagttttgttgtcatgcctaa 151  Q
    ||||||| ||||||||| |||||||||    
T  37349271 gggtatgggttttgttgccatgcctaa 37349297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 7985169 - 7985036
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtgg 116  Q
    |||||||||||||||||| ||||||||| |||||| |||||  |||||||||| || || |||| ||| |||||||||||||| |||||||||| || ||    
T  7985169 ccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggttcaggcgg 7985070  T
Q  117 ataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||   |||||||||||||| |||||||||    
T  7985069 ataaccac-aatatgagttttgttgacatgcctaa 7985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 4741260 - 4741127
Alignment:
Q  20 ccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg-aaacccgtcaaattaggtttggttcgg-tgga 117  Q
    |||||||||||||||||| | |||||| |||||| |||||| |||| ||||||||||||||||| || ||||  ||||| ||| |||||||||||  |||    
T  4741260 ccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaacggggaaaacttgtcaatttatgtttggttcggacgga 4741161  T
Q  118 taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || || |  |||||||||||||||||||| ||||    
T  4741160 tacccgcatgtatgagttttgttgtcatgtctaa 4741127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 11122915 - 11122779
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| ||||  || ||||| |||||  || |||||||||||||||||||||||   ||  ||| ||||||||||  |||||||||||      
T  11122915 acccgtcccatacccgtgtttcgagatcggagaaaacccatacccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggc 11122816  T
Q  115 ggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    || |||||||||||||||||||||||| |||||||||    
T  11122815 gggtaaccacgggtatgagttttgttgccatgcctaa 11122779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 6382318 - 6382183
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| |||| ||| ||||| |||||  || |||||||||||||| |||||||| || || |||||||||||||| |||||| ||| ||     
T  6382318 acccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtttgattcgggc 6382219  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||| ||| ||||||||    
T  6382218 gggtaaccacgggtatgggttttattgccatgccta 6382183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 7334227 - 7334107
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttc-ggtggataaccacgggtat 130  Q
    |||| |||||||||||||||| |||| |||||||||||| ||||||||   ||  ||||||||||||||||||||||||| || ||||| || |  ||||    
T  7334227 tgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattaggtttggttcaggcggatacccgcaagtat 7334128  T
Q  131 gagttttgttgtcatgcctaa 151  Q
    | ||||||||| |||||||||    
T  7334127 gggttttgttgccatgcctaa 7334107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 42299853 - 42299972
Alignment:
Q  34 tgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac--gaggaaacccgtcaaattaggtttggttcgg-tggataaccacgggtat 130  Q
    |||| |||||||||||||||| || ||||||||| ||||||||||||||  ||  ||||||||||||||  ||||||||||| ||| ||||| |   |||    
T  42299853 tgttttgaaatcggggaaaatccatacccatacctaaactcagtcaaaccggaaaaaacccgtcaaattgagtttggttcggatgggtaaccgcatatat 42299952  T
Q  131 gagttttgttgtcatgccta 150  Q
    || |||||||||||||||||    
T  42299953 gaattttgttgtcatgccta 42299972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 7609019 - 7609150
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggt 114  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||||||||  ||||| ||||| || |||||||||||||| ||||| |||| |||    
T  7609019 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagttcgggt 7609118  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || |||||||| ||||| ||||||||| ||||    
T  7609119 gggtaaccacgagtatgggttttgttgccatg 7609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 43893277 - 43893411
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||| ||||  || ||||||||||   || |||||||||||||| |||||||| || ||||| ||||||||||| ||||||| ||||      
T  43893277 acccgtcccatacccgtgtttcgagatcggggaaacc-catacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgggc 43893375  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  43893376 gggtaaccacgggtatgggttttgttgccatgccta 43893411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 44317584 - 44317719
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttcggtg 115  Q
    ||||||||||||||| ||||  || |||||||||||  || |||||||||||||| ||||| ||||| || ||| |||||||||| |||||| |||||      
T  44317584 acccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttgattcgggc 44317683  T
Q  116 ga-taaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| | ||||||    
T  44317684 gagtaaccacgggtatgggttttgttgccttgccta 44317719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 6482078 - 6481950
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggtgga 117  Q
    |||||||||||| |||| | |||| ||||||||  ||||||||||||||||| || |||||   ||| ||| ||||||||||  ||||| ||| ||||||    
T  6482078 cgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatcaaaacagagaaaatccgtcaaattgagtttgattcgggtgga 6481979  T
Q  118 taaccacgggtatgagttttgttgtcatg 146  Q
    |||||||||||||  ||||||||| ||||    
T  6481978 taaccacgggtataggttttgttgccatg 6481950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 151
Target Start/End: Complemental strand, 31918601 - 31918468
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtc-aaacgagg-aaacccgtcaaattaggtttggttc-ggtgga 117  Q
    |||||||||||| ||||  || |||||||||||  || || ||||||||||| ||||| ||||| || |||||||||||||| |||||||||| ||  |     
T  31918601 cgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcagg 31918502  T
Q  118 taaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||| |||| ||||||||| |||||||||    
T  31918501 taaccacggatatgggttttgttgccatgcctaa 31918468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 15987308 - 15987173
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-ggt 114  Q
    |||| |||||||||| |||| | ||||| ||||||| ||| |||||||||||||| || |||||   ||| |||||||||||||| |||||||||| |||    
T  15987308 acccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaacccaatcaaaatggagaaaacccgtcaaattgggtttggttcgggt 15987209  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||| ||  | || ||||||||| ||||||||    
T  15987208 gggtaaccgcgaatgtgggttttgttgccatgccta 15987173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 36919175 - 36919307
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgag-gaaacccgtcaaattaggtttggttcgg-tgga 117  Q
    ||||| |||| |||||| | || |||||||||| |||||| ||||||||||| |||| ||| ||||  ||||||||||||||  ||||||||||| ||      
T  36919175 cgtcctatacacatgttttaaagtcggggaaaactcaaactcatacccaaacccagttaaagcgagaaaaacccgtcaaattgagtttggttcggatgcg 36919274  T
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    || || || ||||||||||||||||||||||||    
T  36919275 tacccgcgagtatgagttttgttgtcatgccta 36919307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 19548983 - 19548853
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaac-gaggaaacccgtcaaattaggtttggttcgg-tg 115  Q
    ||||||||| ||||  |||| |||||||||||||||  |  | |||||||||||| ||||||||  | ||||| |||||||||| |||||||||||| |     
T  19548983 acccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaaccgtcaaattgggtttggttcgggta 19548884  T
Q  116 gataaccacgggtatgagttttgttgtcatg 146  Q
    | || |||  |||||||||||||||||||||    
T  19548883 ggtacccataggtatgagttttgttgtcatg 19548853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 1724356 - 1724307
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacc 67  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  1724356 acccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 5902627 - 5902531
Alignment:
Q  57 aaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||||| |||||||| || ||||| |||||||||||  |||||||||||  || |||||||||||||  ||||||||| ||||||||    
T  5902627 aaacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggttttgttgccatgccta 5902531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 21423910 - 21424045
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaac--ccgtcaaattaggtttggttcggt- 114  Q
    ||||||| ||||||| ||||  || || ||||||||  || |||||||||||||| ||||||||   |||||   |||||||||| | ||||||||||      
T  21423910 acccgtctcatacccgtgtttcgagattggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgggc 21424009  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||||||||| ||| ||||||||    
T  21424010 gggtaaccacgggtatgagttttattgccatgccta 21424045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 32585542 - 32585670
Alignment:
Q  22 gtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcggt-ggat 118  Q
    ||||||||||| |||| ||||||||| |||||||||      ||||||||| ||||||||   ||  ||||| |||||||| ||||||||| ||  ||||    
T  32585542 gtcccatacccgtgttttgaaatcggagaaaattca------tacccaaacccagtcaaaaaggggaaaaccggtcaaattgggtttggtttgggcggat 32585635  T
Q  119 aaccacgggtatgagttttgttgtcatgcctaaat 153  Q
    |||| |||||||||||||||||| ||||| |||||    
T  32585636 aaccgcgggtatgagttttgttgccatgcataaat 32585670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 55826669 - 55826534
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcggt- 114  Q
    ||||||||||||||  ||||  || |||||||||||  || || |||| |||||| ||||||||  |||  ||| |||||||||| | ||||||||||      
T  55826669 acccgtcccatacctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggttcggac 55826570  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || |||||||||||||| ||||||||| ||||||||    
T  55826569 gggtaaccacgggtatgggttttgttgccatgccta 55826534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 47550399 - 47550336
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| ||| ||||||||||| ||| ||| |||||||||| ||||||||    
T  47550399 acccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtcaaa 47550336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 39375327 - 39375424
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgagg--aaacccgtcaaattaggtttggttcgg 113  Q
    |||||||| |||||| | || |||||||||||||||  ||||| |||| |||||||||||||||  |||  ||||||||||||||   ||||||||||    
T  39375327 acccgtcctatacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaaataggaaaaacccgtcaaattgaatttggttcgg 39375424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 425890 - 425943
Alignment:
Q  95 caaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgc 147  Q
    ||||||||||| |||||||  ||||||||||| |||||||||||||||||||||    
T  425890 caaattaggttaggttcggacggataaccacgagtatgagttttgttgtcatgc 425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 150
Target Start/End: Original strand, 31752508 - 31752640
Alignment:
Q  21 cgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaa--cccgtcaaattaggtttggttcggt-gga 117  Q
    |||| ||||||| |||| |||||||||||||||  || ||||||| |||||| || |||||   | |||  ||||||||||| | |||| |||||  ||     
T  31752508 cgtctcatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatttgattcgggcggg 31752607  T
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||| |||||||| ||||||||||||||||||    
T  31752608 taaccgcgggtatgggttttgttgtcatgccta 31752640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 44887669 - 44887725
Alignment:
Q  92 cgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgc 147  Q
    ||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||    
T  44887669 cgtcaaattgggtttggttcgggcggataaccgtgggtatgagttttgttgtcatgc 44887725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 53906313 - 53906249
Alignment:
Q  87 aaacccgtcaaattaggtttggttc-ggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||||||||| |||||||||| || ||||||||  ||||||| ||||||||| ||||||||    
T  53906313 aaacccgtcaaattgggtttggttcgggcggataaccgtgggtatgggttttgttgccatgccta 53906249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 14605971 - 14605908
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||| | ||||| | || ||||||||| |||||  ||||||||||||||||||||||||||    
T  14605971 acccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43309532 - 43309595
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||| |||| |||||||||| ||||  ||||| ||||| ||||| ||||||||    
T  43309532 acccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaa 43309595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 12825472 - 12825386
Alignment:
Q  65 acccaaactcagtcaaa-cgaggaaacccgtcaaattaggtttggttcggtggataaccacgggtatgagttttgttgtcatgccta 150  Q
    ||||||||||||||||| || | |||| |||||||||| |||| |||||  || ||| || ||||||| ||||||||||||| ||||    
T  12825472 acccaaactcagtcaaaacgggaaaacacgtcaaattaagttttgttcgacgggtaatcaagggtatgggttttgttgtcataccta 12825386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 23927629 - 23927564
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggt-ggataaccacgggtatgagttttgttgtcatgcctaaa 152  Q
    |||||| ||||||||||||||||| ||  ||||| || || ||||||||||||||||||||||||||    
T  23927629 aaacccatcaaattaggtttggtttgggcggata-ccgcgtgtatgagttttgttgtcatgcctaaa 23927564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 39086217 - 39086269
Alignment:
Q  29 acccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||||||||||||||| ||||| |||||| |||| |||||| || |||||    
T  39086217 acccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaa 39086269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 39188654 - 39188686
Alignment:
Q  118 taaccacgggtatgagttttgttgtcatgccta 150  Q
    |||||||| ||||||||||||||||||||||||    
T  39188654 taaccacgtgtatgagttttgttgtcatgccta 39188686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 14228 - 14098
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaacgaggaaa--cccgtcaaattaggtttggttcgg-t 114  Q
    |||||| |||||||| |||| | ||||||||||||| |||||| ||||||||||| ||  ||||   |||||  ||||||||||| ||||||||| || |    
T  14228 acccgttccatacccgtgtttt-aaatcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtttgggt 14130  T
Q  115 ggataaccacgggtatgagttttgttgtcatg 146  Q
    || |||||||| ||||||||||||||||||||    
T  14129 gggtaaccacgagtatgagttttgttgtcatg 14098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 151
Target Start/End: Original strand, 265 - 402
Alignment:
Q  16 caacccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa--cgaggaaacccgtcaaattaggtttggttc-g 112  Q
    ||||||||||||||||| |||| ||| || | |||||| | | |||||||||||||||||||||||   ||| ||||||||| ||||  ||||||||| |    
T  265 caacccgtcccatacccgtgttttgagattgaggaaaactgatacccatacccaaactcagtcaaaacggagaaaacccgtc-aattgagtttggttctg 363  T
Q  113 gtggataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    | || ||| ||||| |||| |||||||||||||||||||    
T  364 gcgggtaatcacggatatgggttttgttgtcatgcctaa 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 7740 - 7874
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa-cgaggaaa-cccgtcaaattaggtttggttcgg-t 114  Q
    ||||||| ||||||| |||| |||||| || |||||| | ||| |||||||||||||| ||||| || ||||| ||||||||||||  ||| |||||| |    
T  7740 acccgtctcatacccgtgttttgaaattggagaaaat-ctaacacatacccaaactcaatcaaaacggggaaaacccgtcaaattaaatttagttcgggt 7838  T
Q  115 ggataaccacgggtatgagttttgttgtcatgccta 150  Q
    || ||||||||||||||  |||||||| ||||||||    
T  7839 gggtaaccacgggtatggattttgttggcatgccta 7874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 33436 - 33490
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaac 72  Q
    ||||||||||||||| |||| |||||||||||||||  |||||||||||||||||    
T  33436 acccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaac 33490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 197323 - 197258
Alignment:
Q  87 aaacccgtcaaattaggtttggttcggtg-gataaccacgggtatgagttttgttgtcatgcctaa 151  Q
    ||||||||||||||||||||| |||||   |||||||||  |||||||||||||||||||||||||    
T  197323 aaacccgtcaaattaggtttgattcggacagataaccacatgtatgagttttgttgtcatgcctaa 197258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 211407 - 211470
Alignment:
Q  18 acccgtcccatacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||||| | ||||| | || ||||||||| |||||  ||||||||||||||||||||||||||    
T  211407 acccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1118 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1118
Description:

Target: scaffold1118; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 661 - 714
Alignment:
Q  28 tacccatgttgtgaaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    ||||| |||| | |||||| ||||||||||||| |||||||||||| |||||||    
T  661 tacccgtgttttaaaatcgaggaaaattcaaactcatacccaaacttagtcaaa 714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 67815 - 67855
Alignment:
Q  41 aaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||| ||||||||||| ||||| ||||||||    
T  67815 aaatcggggaaaatccaaacccatactcaaacccagtcaaa 67855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 75658 - 75698
Alignment:
Q  41 aaatcggggaaaattcaaacccatacccaaactcagtcaaa 81  Q
    |||||||||||||| ||||||||||| ||||| ||||||||    
T  75658 aaatcggggaaaatccaaacccatactcaaacccagtcaaa 75698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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