View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3985_low_8 (Length: 491)

Name: NF3985_low_8
Description: NF3985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3985_low_8
NF3985_low_8
[»] chr1 (44 HSPs)
chr1 (247-475)||(31574090-31574318)
chr1 (17-168)||(31574397-31574549)
chr1 (34-123)||(42512765-42512855)
chr1 (53-150)||(6029316-6029413)
chr1 (28-150)||(16451189-16451312)
chr1 (34-123)||(7837222-7837312)
chr1 (59-123)||(8780626-8780690)
chr1 (53-132)||(15539905-15539984)
chr1 (53-132)||(42510605-42510684)
chr1 (53-123)||(17888037-17888107)
chr1 (53-123)||(28340318-28340388)
chr1 (53-135)||(35335777-35335859)
chr1 (53-123)||(50304740-50304810)
chr1 (34-150)||(31004194-31004311)
chr1 (53-150)||(45490890-45490987)
chr1 (53-150)||(51264557-51264654)
chr1 (34-113)||(16704825-16704905)
chr1 (24-150)||(26118200-26118327)
chr1 (53-132)||(41972991-41973070)
chr1 (55-150)||(45658883-45658978)
chr1 (34-123)||(6143981-6144071)
chr1 (53-123)||(8838986-8839056)
chr1 (53-123)||(41967864-41967934)
chr1 (53-123)||(49303369-49303439)
chr1 (53-150)||(1351450-1351547)
chr1 (53-114)||(5109826-5109887)
chr1 (28-132)||(11772621-11772726)
chr1 (34-150)||(13994070-13994187)
chr1 (57-150)||(17327668-17327761)
chr1 (28-120)||(26733647-26733740)
chr1 (36-135)||(504388-504488)
chr1 (36-123)||(7837463-7837551)
chr1 (53-132)||(844739-844818)
chr1 (53-132)||(6711061-6711140)
chr1 (53-132)||(16386934-16387013)
chr1 (53-132)||(24339653-24339732)
chr1 (53-132)||(30105695-30105774)
chr1 (53-132)||(32270433-32270512)
chr1 (53-132)||(32289359-32289438)
chr1 (53-132)||(35387326-35387405)
chr1 (53-123)||(7184007-7184077)
chr1 (59-135)||(15324229-15324306)
chr1 (24-132)||(39281974-39282083)
chr1 (53-98)||(42705252-42705297)
[»] chr8 (32 HSPs)
chr8 (24-123)||(29610980-29611080)
chr8 (24-110)||(9624310-9624396)
chr8 (34-123)||(7591382-7591472)
chr8 (34-150)||(15001519-15001636)
chr8 (24-132)||(40389111-40389220)
chr8 (53-123)||(22999338-22999408)
chr8 (34-123)||(41548698-41548788)
chr8 (53-132)||(27104030-27104109)
chr8 (24-150)||(30542947-30543074)
chr8 (24-150)||(39642936-39643063)
chr8 (53-123)||(10467144-10467214)
chr8 (53-123)||(37474780-37474850)
chr8 (53-150)||(8673010-8673107)
chr8 (53-113)||(30501235-30501295)
chr8 (53-132)||(37861930-37862009)
chr8 (53-150)||(29563181-29563278)
chr8 (53-150)||(37618347-37618444)
chr8 (24-123)||(18354907-18355006)
chr8 (29-89)||(39061417-39061477)
chr8 (53-132)||(4052551-4052630)
chr8 (53-132)||(34101579-34101658)
chr8 (53-132)||(37664238-37664317)
chr8 (53-132)||(41709848-41709927)
chr8 (53-123)||(14004999-14005069)
chr8 (34-131)||(22756346-22756444)
chr8 (57-123)||(25478323-25478389)
chr8 (53-123)||(34063208-34063278)
chr8 (53-123)||(35225742-35225812)
chr8 (53-123)||(45446535-45446605)
chr8 (53-150)||(29672278-29672375)
chr8 (28-88)||(45114170-45114231)
chr8 (64-132)||(7394780-7394848)
[»] chr4 (50 HSPs)
chr4 (34-132)||(50729455-50729554)
chr4 (31-135)||(9948000-9948105)
chr4 (53-132)||(26083413-26083492)
chr4 (34-123)||(50178405-50178495)
chr4 (53-150)||(37865809-37865906)
chr4 (24-132)||(39078735-39078844)
chr4 (53-132)||(36497291-36497370)
chr4 (52-123)||(44649096-44649167)
chr4 (34-123)||(11056125-11056215)
chr4 (53-141)||(20517955-20518043)
chr4 (53-132)||(3649710-3649789)
chr4 (53-132)||(20802464-20802543)
chr4 (53-132)||(36886006-36886085)
chr4 (57-123)||(52949803-52949869)
chr4 (53-150)||(33176965-33177062)
chr4 (53-150)||(38812576-38812673)
chr4 (53-132)||(4325865-4325944)
chr4 (53-132)||(29785470-29785549)
chr4 (53-132)||(38486190-38486269)
chr4 (53-123)||(29592978-29593048)
chr4 (53-123)||(46680443-46680513)
chr4 (53-123)||(47642424-47642494)
chr4 (53-150)||(55065265-55065363)
chr4 (53-114)||(7554890-7554951)
chr4 (53-114)||(21202831-21202892)
chr4 (53-114)||(24210411-24210472)
chr4 (24-132)||(44324245-44324354)
chr4 (57-150)||(49152037-49152130)
chr4 (28-123)||(9807238-9807334)
chr4 (53-132)||(30942862-30942942)
chr4 (83-135)||(52673882-52673934)
chr4 (53-132)||(1231385-1231464)
chr4 (53-132)||(2629884-2629963)
chr4 (53-132)||(21580100-21580179)
chr4 (53-132)||(24002413-24002492)
chr4 (53-112)||(36743621-36743680)
chr4 (34-112)||(44640417-44640496)
chr4 (34-120)||(47666961-47667048)
chr4 (53-132)||(52319397-52319476)
chr4 (53-132)||(53200576-53200655)
chr4 (31-129)||(55996845-55996944)
chr4 (53-123)||(9512273-9512343)
chr4 (53-123)||(12600969-12601039)
chr4 (53-123)||(34929998-34930068)
chr4 (53-123)||(50727846-50727916)
chr4 (53-123)||(50735860-50735930)
chr4 (53-150)||(23521936-23522033)
chr4 (28-132)||(32181337-32181442)
chr4 (53-114)||(55593977-55594038)
chr4 (26-89)||(47741386-47741450)
[»] chr2 (31 HSPs)
chr2 (17-132)||(6896239-6896355)
chr2 (53-132)||(41366050-41366129)
chr2 (53-135)||(44284697-44284779)
chr2 (53-150)||(8112353-8112450)
chr2 (53-150)||(32766444-32766541)
chr2 (24-132)||(38623214-38623323)
chr2 (23-150)||(40832378-40832506)
chr2 (53-150)||(9732870-9732967)
chr2 (53-150)||(37308708-37308805)
chr2 (57-114)||(40692386-40692443)
chr2 (17-132)||(30712931-30713047)
chr2 (53-132)||(5278774-5278853)
chr2 (53-132)||(7258968-7259047)
chr2 (53-132)||(18685907-18685986)
chr2 (53-123)||(33366690-33366760)
chr2 (53-123)||(34338890-34338960)
chr2 (24-132)||(28824467-28824576)
chr2 (53-150)||(42706412-42706509)
chr2 (24-123)||(22979914-22980014)
chr2 (53-132)||(7761513-7761592)
chr2 (53-132)||(17540786-17540865)
chr2 (53-132)||(35114856-35114935)
chr2 (53-112)||(39461405-39461464)
chr2 (53-123)||(32497995-32498065)
chr2 (53-123)||(38993011-38993081)
chr2 (53-123)||(42365657-42365727)
chr2 (53-114)||(3913400-3913461)
chr2 (53-134)||(22063731-22063811)
chr2 (53-114)||(30326272-30326333)
chr2 (53-93)||(2086173-2086213)
chr2 (53-93)||(4641624-4641664)
[»] chr3 (33 HSPs)
chr3 (53-132)||(3867583-3867662)
chr3 (34-132)||(19906834-19906933)
chr3 (24-123)||(31882926-31883026)
chr3 (34-116)||(41682967-41683050)
chr3 (34-123)||(33364692-33364782)
chr3 (53-123)||(50386390-50386460)
chr3 (28-132)||(12349079-12349184)
chr3 (53-150)||(49748845-49748942)
chr3 (53-132)||(24571353-24571432)
chr3 (53-132)||(25860355-25860434)
chr3 (53-132)||(40094575-40094654)
chr3 (53-150)||(29584929-29585026)
chr3 (53-150)||(39052772-39052869)
chr3 (53-132)||(34026739-34026818)
chr3 (53-132)||(51259714-51259793)
chr3 (53-123)||(3864609-3864679)
chr3 (53-123)||(10747281-10747351)
chr3 (54-124)||(39215404-39215474)
chr3 (35-135)||(17264587-17264688)
chr3 (26-150)||(21373984-21374109)
chr3 (53-122)||(24721567-24721636)
chr3 (53-150)||(28675844-28675941)
chr3 (53-150)||(50678852-50678949)
chr3 (57-150)||(51925146-51925239)
chr3 (17-120)||(26847411-26847515)
chr3 (34-132)||(3964360-3964459)
chr3 (53-132)||(20255116-20255195)
chr3 (53-132)||(20609582-20609661)
chr3 (53-123)||(44117020-44117090)
chr3 (53-114)||(3695241-3695302)
chr3 (53-150)||(21221295-21221391)
chr3 (54-111)||(22484678-22484735)
chr3 (105-134)||(45605624-45605653)
[»] chr6 (27 HSPs)
chr6 (53-150)||(34176883-34176980)
chr6 (53-150)||(3259736-3259833)
chr6 (53-132)||(11675353-11675432)
chr6 (53-132)||(32409831-32409910)
chr6 (53-114)||(11212346-11212407)
chr6 (53-150)||(18597137-18597234)
chr6 (53-150)||(32132359-32132456)
chr6 (36-111)||(9614066-9614142)
chr6 (53-132)||(3379781-3379860)
chr6 (53-132)||(3932786-3932865)
chr6 (53-132)||(15276916-15276995)
chr6 (53-132)||(24203433-24203512)
chr6 (53-123)||(10485237-10485307)
chr6 (53-123)||(32860131-32860201)
chr6 (53-150)||(166902-166999)
chr6 (28-132)||(14925409-14925514)
chr6 (28-150)||(31870050-31870176)
chr6 (53-112)||(8177861-8177920)
chr6 (57-128)||(11382137-11382208)
chr6 (53-132)||(11613770-11613849)
chr6 (53-132)||(24242735-24242814)
chr6 (53-123)||(10960080-10960150)
chr6 (53-123)||(17867915-17867985)
chr6 (53-123)||(17877698-17877768)
chr6 (53-123)||(29054436-29054506)
chr6 (57-150)||(10324094-10324187)
chr6 (53-150)||(11279181-11279278)
[»] chr7 (27 HSPs)
chr7 (53-132)||(329545-329624)
chr7 (53-123)||(38301426-38301496)
chr7 (57-123)||(48445605-48445671)
chr7 (53-150)||(21784928-21785025)
chr7 (53-132)||(47953265-47953344)
chr7 (53-150)||(1870192-1870289)
chr7 (53-150)||(40753212-40753309)
chr7 (53-132)||(10932498-10932577)
chr7 (24-110)||(21408538-21408625)
chr7 (53-132)||(41211141-41211220)
chr7 (34-123)||(1363720-1363810)
chr7 (53-123)||(43158627-43158697)
chr7 (53-123)||(43368285-43368355)
chr7 (53-150)||(22724472-22724569)
chr7 (53-150)||(47316639-47316736)
chr7 (53-132)||(18470759-18470836)
chr7 (53-132)||(26994166-26994245)
chr7 (53-132)||(36769510-36769589)
chr7 (53-132)||(44748770-44748849)
chr7 (57-123)||(3922648-3922714)
chr7 (53-111)||(18386620-18386678)
chr7 (52-98)||(46627267-46627313)
chr7 (24-132)||(11321796-11321905)
chr7 (53-150)||(11822280-11822377)
chr7 (53-150)||(26371750-26371847)
chr7 (24-112)||(26700572-26700661)
chr7 (53-150)||(43189183-43189280)
[»] chr5 (26 HSPs)
chr5 (24-150)||(4689614-4689741)
chr5 (24-150)||(31770507-31770634)
chr5 (24-150)||(32528768-32528895)
chr5 (53-123)||(18470374-18470444)
chr5 (53-123)||(37148535-37148605)
chr5 (53-132)||(11963412-11963491)
chr5 (53-132)||(28090466-28090545)
chr5 (53-150)||(553450-553547)
chr5 (53-132)||(4818086-4818165)
chr5 (53-132)||(7523243-7523322)
chr5 (53-132)||(21739107-21739186)
chr5 (53-132)||(24181570-24181649)
chr5 (53-132)||(39918578-39918657)
chr5 (53-123)||(22432255-22432325)
chr5 (53-150)||(8136890-8136987)
chr5 (24-132)||(34794958-34795067)
chr5 (53-150)||(40489390-40489487)
chr5 (53-132)||(31880022-31880101)
chr5 (53-132)||(35701348-35701427)
chr5 (53-123)||(5598560-5598630)
chr5 (34-123)||(7725735-7725825)
chr5 (53-123)||(23091250-23091320)
chr5 (31-112)||(26180217-26180299)
chr5 (53-123)||(32092928-32092998)
chr5 (24-123)||(3735437-3735537)
chr5 (53-113)||(7770225-7770285)
[»] scaffold0050 (1 HSPs)
scaffold0050 (53-150)||(42896-42993)
[»] scaffold0280 (1 HSPs)
scaffold0280 (53-132)||(13633-13712)
[»] scaffold0025 (1 HSPs)
scaffold0025 (34-112)||(5365-5444)
[»] scaffold0004 (1 HSPs)
scaffold0004 (53-132)||(372910-372989)
[»] scaffold0650 (1 HSPs)
scaffold0650 (53-150)||(1589-1686)
[»] scaffold0054 (2 HSPs)
scaffold0054 (53-123)||(23655-23725)
scaffold0054 (28-135)||(19975-20083)
[»] scaffold0047 (1 HSPs)
scaffold0047 (53-123)||(19102-19172)
[»] scaffold0027 (1 HSPs)
scaffold0027 (53-123)||(15252-15322)
[»] scaffold0169 (1 HSPs)
scaffold0169 (53-150)||(18000-18097)
[»] scaffold0208 (1 HSPs)
scaffold0208 (53-132)||(2284-2363)
[»] scaffold0098 (1 HSPs)
scaffold0098 (53-132)||(51509-51588)
[»] scaffold0957 (1 HSPs)
scaffold0957 (53-114)||(2442-2503)
[»] scaffold0360 (1 HSPs)
scaffold0360 (83-135)||(13555-13607)


Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 247 - 475
Target Start/End: Complemental strand, 31574318 - 31574090
Alignment:
Q  247 tcttttgttattttatcttgtgctgttctagtgtgcttaccgtttagcgtattaaaatgatgaaaagctcaataaacaatcactaacttaatctcagtct 346  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31574318 tcttttattattttatcttgtgttgttctagtgcgcttaccgtttagcgtattaaaatgatgaaaagctcaataaacaatcattaacttaatctcagtct 31574219  T
Q  347 atgagataagtttttatactatcactattcaaaaataactaaatgccaccaaatagtttaggtttctatggcaacaataatcaaccgtttgtgtatcatt 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31574218 atgagataagtttttatactatcactattcaaaaataactaaatgccaccaaatagtttaggtttctatggcaacaataatcaaccgtttgtgtatcatt 31574119  T
Q  447 gacacaaacttaagttgtgtacaataaac 475  Q
    |||||||||||||||||||| ||||||||    
T  31574118 gacacaaacttaagttgtgtgcaataaac 31574090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 31574549 - 31574397
Alignment:
Q  17 atgaaacacatgacatgacaacttcagttgtacaattttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactga 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||  |||||||||||||||||| |||| |||||||||||||| |    
T  31574549 atgaagcacatgacatgacaacttcagttgtacaattttgatttgtaaaactatttcaaaaacaaaacaaactggagataagaaacatgacaaaaactaa 31574450  T
Q  117 aatttttatctctcactaattcacaacgcaactt-gtgtcctatatacaagtt 168  Q
    ||||| ||||||||||||||||||||||||||||  |||||||||||||||||    
T  31574449 aatttgtatctctcactaattcacaacgcaacttattgtcctatatacaagtt 31574397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 42512765 - 42512855
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  42512765 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 42512855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 6029316 - 6029413
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| ||| ||||||||| || |||| |||| ||||||||||||||||||| || ||||| ||  |||||| ||||||    
T  6029316 tttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactt 6029413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 16451312 - 16451189
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    ||||| ||||||  |||||| |||| |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| ||    
T  16451312 gacataacaactctagttgtccaatgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc 16451213  T
Q  127 tctcactaattcacaacgcaactt 150  Q
    |||||| ||  |||||| ||||||    
T  16451212 tctcaccaaaccacaacacaactt 16451189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 7837312 - 7837222
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| |||||||||||||||||  ||||||| ||| |||| ||||||||||||| |||| |||||    
T  7837312 acaacttcagttgttcagtgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaatttttt 7837222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 8780626 - 8780690
Alignment:
Q  59 ttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||| ||||||||||| | ||| |||||||||| ||||||||||||| |||||||||||||||||    
T  8780626 ttgtaaaactgtttcatggacataacaaactggggacaagagacatgccaaaaactgaaattttt 8780690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 15539905 - 15539984
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||| | ||| |||||||||||| ||||||||| ||||||| |||||| |||| ||| ||||    
T  15539905 tttgatttgtaaaactgtttcaaggacagaacaaactggaggcaagagacaggacaaaacctgaaacttttgtctttcac 15539984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 42510684 - 42510605
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||| || ||||||||||||| |||  |||||||||||||||| |||| |||||||||| | |||||| ||||||||    
T  42510684 tttgattcgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtctctcac 42510605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 17888107 - 17888037
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||| | ||||||    
T  17888107 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatattttt 17888037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 28340318 - 28340388
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||| | ||||||    
T  28340318 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatattttt 28340388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 35335859 - 35335777
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaa 135  Q
    |||||||||| ||||||||  ||  ||| |||||| ||||||||||||||||||||||||| || ||| || |||||||||||    
T  35335859 tttgatttgtaaaactgttgtagagacataacaaaatggagacaagagacatgacaaaaaccgatattcttgtctctcactaa 35335777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 50304810 - 50304740
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||| ||| |||||||||||| ||||||    
T  50304810 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacaagacaaaaactgatattttt 50304740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 31004311 - 31004194
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| || | |||| ||||||||||||  ||||| || |||||    
T  31004311 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgggacaggacaaaaactgatgtttttgtccctcac 31004212  T
Q  133 taattcacaacgcaactt 150  Q
     ||  |||||| ||||||    
T  31004211 caaaccacaacacaactt 31004194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 45490890 - 45490987
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||| | |||  ||||||||||| |||| ||||||||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  45490890 tttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 45490987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 51264654 - 51264557
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  51264654 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 51264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 16704905 - 16704825
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaac 113  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||    
T  16704905 acaacttcaattgtccaatgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaac 16704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 26118200 - 26118327
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||| ||||||  |||||| || | |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||| | |||||    
T  26118200 acatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatatttt 26118299  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    | || ||||| || ||||| | ||||||    
T  26118300 tgtccctcaccaaatcacagcacaactt 26118327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 41973070 - 41972991
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||  |||  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  41973070 tttgatttgtaaaactgtttcagatacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 41972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 45658978 - 45658883
Alignment:
Q  55 tgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||| ||||||||||| | |||  |||||||||||||||  |||| |||||||||||| |||||| || ||||| ||  |||||| ||||||    
T  45658978 tgatttgtaaaactgtttcaagtacaggacaaactggagacaaaggacaagacaaaaactgatatttttgtcgctcaccaaaccacaacacaactt 45658883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 6143981 - 6144071
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||||||| |||| |||||||||| |||| |||||||  |||  ||||||||||| |||| |||| ||||||||||| |||||||    
T  6143981 acaactgcagttgtccaatgtttgatttgtaaaacagtttcagagacatgacaaactggaggcaagggacaggacaaaaactgcaattttt 6144071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 8839056 - 8838986
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||||||||| || |||| |||||||||||  ||  ||||||||||||||||| ||||||    
T  8839056 tttgatttgtaaaactgtttctggtacaagacaaactggaggaaatggacatgacaaaaactgatattttt 8838986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 41967864 - 41967934
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| ||||||||| |||||||||| | ||||||    
T  41967864 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagagacaagacaaaaactcatattttt 41967934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 49303369 - 49303439
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| | || |||||||||||||||| |||| || ||||||| | ||||||    
T  49303369 tttgatttgtaaaactgtttcaggtataagacaaactggagacaagggacaagagaaaaactcatattttt 49303439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 1351450 - 1351547
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||  ||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  1351450 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 1351547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 5109887 - 5109826
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||| ||||| ||||| |||| |||| ||||||||||    
T  5109887 tttgatttgtaaaactgtttcaggtacaagacaaattggaggcaagggacaggacaaaaact 5109826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 11772621 - 11772726
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    ||||| |||||| ||||||| || | |||||||||| ||||||||||||| ||||  ||| |||||| |||  |||| |||||||||||| |||||| ||    
T  11772621 gacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaaggcaatctggaggcaaaggacaagacaaaaactgatatttttgtc 11772720  T
Q  127 tctcac 132  Q
     |||||    
T  11772721 cctcac 11772726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 13994070 - 13994187
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||||||||||| | |||  ||||| ||||| ||||  ||  ||||||||||||||||||| || |||||    
T  13994070 acaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcac 13994169  T
Q  133 taattcacaacgcaactt 150  Q
     ||  |||||| ||||||    
T  13994170 caaaccacaacacaactt 13994187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 17327668 - 17327761
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| || ||||| | ||||||    
T  17327668 atttgtaaaactgtttcaggtacaggacaaactggagtcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 17327761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 26733740 - 26733647
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatt 120  Q
    |||||||||||||||||||||| || |||||||||| |||||||||   | ||   ||||||| ||||| |  |||||||||||||||||||||    
T  26733740 gacatgacaacttcagttgtacgatgtttgatttgtaaaactgtttttaggaccggacaaactagagacgatggacatgacaaaaactgaaatt 26733647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 504388 - 504488
Alignment:
Q  36 aacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcacta 134  Q
    |||||||||||||||   |||||||||  ||| ||||| ||| |||| ||||||| ||| |||| ||||  ||||||||||||| |||| ||||||||||    
T  504388 aacttcagttgtacagcgtttgatttgcaaaattgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcacta 504487  T
Q  135 a 135  Q
    |    
T  504488 a 504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 7837551 - 7837463
Alignment:
Q  36 aacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||| || | |||||||| | |||||||||||||||||  ||||||| ||| || | ||||||||||||| |||| |||||    
T  7837551 aacttcagttgttcagtgtttgatttataaaactgtttcaggaacatgacaaactagaggcaggggacatgacaaaaattgaatttttt 7837463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 844739 - 844818
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  844739 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 844818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 6711061 - 6711140
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  6711061 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 6711140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 16387013 - 16386934
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  16387013 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 16386934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 24339653 - 24339732
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||||||  |||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  24339653 tttgatttgtataactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24339732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 30105695 - 30105774
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| | |  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  30105695 tttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 30105774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 32270512 - 32270433
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| | |  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  32270512 tttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 32270433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 32289359 - 32289438
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||| |||| |||||||||| | |||||| || |||||    
T  32289359 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcac 32289438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 35387326 - 35387405
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  |||||||||||  ||| |||| |||||||||| | |||||| || |||||    
T  35387326 tttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagggacaggacaaaaactcatatttttgtccctcac 35387405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 7184077 - 7184007
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  7184077 tttgatatgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 7184007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 15324306 - 15324229
Alignment:
Q  59 ttgtgaaactgtttcaggaacaaaacaaactggag-acaagagacatgacaaaaactgaaatttttatctctcactaa 135  Q
    |||| ||||||||  || ||||| |||||| |||| |||| |||||||||||||||||||||  |||||| |||||||    
T  15324306 ttgtaaaactgttatagaaacaacacaaaccggaggacaaaagacatgacaaaaactgaaatacttatctttcactaa 15324229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 39282083 - 39281974
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    |||||||| || |||||||||||| || | |||||||||| ||||||||| ||| |||  ||||||| ||  |||| |||| |||||||||| | |||||    
T  39282083 acatgacaagataacttcagttgttcagtgtttgatttgtaaaactgtttaaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttt 39281984  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  39281983 tgtccctcac 39281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 42705252 - 42705297
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaag 98  Q
    |||||||||| ||||||||||||| |||  ||||||||||||||||    
T  42705252 tttgatttgtaaaactgtttcaggtacaggacaaactggagacaag 42705297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 29610980 - 29611080
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||||||||| |||| |||| ||||||||||||||||||    
T  29610980 acatgacagaacaacttcagttgtccaatgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttt 29611079  T
Q  123 t 123  Q
    |    
T  29611080 t 29611080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 9624396 - 9624310
Alignment:
Q  24 acatgacatgacaacttcagttgtacaattttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaa 110  Q
    ||||||||||||||||||||||||||| | || |||||| ||| |||||| || |||| |||||| |||||||||||||||||||||    
T  9624396 acatgacatgacaacttcagttgtacactgtttatttgtaaaattgtttctgggacaagacaaacgggagacaagagacatgacaaa 9624310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 7591382 - 7591472
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  7591382 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 7591472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 15001636 - 15001519
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||| |||||  |||||||||||||||||| || |||||    
T  15001636 acaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcac 15001537  T
Q  133 taattcacaacgcaactt 150  Q
     ||  |||||| ||||||    
T  15001536 caaaccacaacacaactt 15001519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 40389220 - 40389111
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||| ||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||||| |||||    
T  40389220 acatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttt 40389121  T
Q  123 tatctctcac 132  Q
    ||||||||||    
T  40389120 tatctctcac 40389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 22999408 - 22999338
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  22999408 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 22999338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 41548788 - 41548698
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||||||||||||  |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  41548788 acaacttcagttgtccagtgtttgatttgtaaaactgtttcagatacatgacaaactggaggcaagagacaggacaaaaactgatattttt 41548698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 27104109 - 27104030
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  27104109 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 27104030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 30542947 - 30543074
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||| ||||||| |||||| || | |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||| | |||||    
T  30542947 acatgacataacaactttagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttt 30543046  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    | || ||||| ||  |||||| ||||||    
T  30543047 tgtccctcaccaaaccacaacacaactt 30543074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 39643063 - 39642936
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||||||||||| || | |||||||| | ||||||||||||| |||  ||||||||||| |||| |||| || ||||||||| |||||    
T  39643063 acatgacagaacaacttcagttgtccagtgtttgatttttaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactgatatttt 39642964  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    | || ||||| ||  |||||| ||||||    
T  39642963 tgtccctcaccaaaccacaacacaactt 39642936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 10467214 - 10467144
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  10467214 tttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaaaaactgatattttt 10467144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 37474850 - 37474780
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||| | ||||||    
T  37474850 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaacttatattttt 37474780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 8673010 - 8673107
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  8673010 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 8673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 30501295 - 30501235
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaac 113  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||    
T  30501295 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaac 30501235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 37862009 - 37861930
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||| || ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||||| |||||    
T  37862009 tttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcac 37861930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 29563181 - 29563278
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  29563181 tttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 29563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 37618347 - 37618444
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||  |||| |||||||||||| |||||| || ||||| ||  |||||| ||||||    
T  37618347 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 37618444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 18354907 - 18355006
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    |||||||||||||| || ||||||| ||| ||| |||||| |||||||| || | ||||||||||| |||| ||||||| |  || ||||||||||||||    
T  18354907 acatgacatgacaattttagttgtataatatttaatttgtaaaactgttacatggacaaaacaaaccggagccaagagagacaac-aaaactgaaatttt 18355005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 39061417 - 39061477
Alignment:
Q  29 acatgacaacttcagttgtacaattttgatttgtgaaactgtttcaggaacaaaacaaact 89  Q
    ||||||||||||||||||||| ||||| | |||| ||| ||||||||| ||| ||||||||    
T  39061417 acatgacaacttcagttgtactatttttaattgtaaaattgtttcagggacataacaaact 39061477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 4052630 - 4052551
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||| |||| |||||||||| | |||||| || |||||    
T  4052630 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 4052551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 34101658 - 34101579
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||  ||||||||| | |||||| || |||||    
T  34101658 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaacacaaaaactcatatttttgtccctcac 34101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 37664238 - 37664317
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  37664238 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 37664317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 41709927 - 41709848
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||| | |||||| || |||||    
T  41709927 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgacaggacaaaaactcatatttttgtccctcac 41709848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 14004999 - 14005069
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  14004999 tttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagggacaagacaaaaactcatattttt 14005069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 22756346 - 22756444
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctca 131  Q
    |||||| ||||| |||||| |||||||||| |||||||||| || | |  ||||| | ||| ||||||||| |||||||||  ||||||||||| ||||    
T  22756346 acaactccagttatacaatgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaatttttatccctca 22756444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 25478389 - 25478323
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||||||||||||| |||  |||||||||||||||| |||| || ||||||| | ||||||    
T  25478389 atttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggaaaaaaactcatattttt 25478323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 34063278 - 34063208
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||| ||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  34063278 tttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 34063208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 35225812 - 35225742
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||| ||||| |||| |||||||| |||  ||||||||||| |||| |||| ||||||||||| |||||||    
T  35225812 tttggtttgtaaaacagtttcagggacaggacaaactggaggcaagggacaggacaaaaactgcaattttt 35225742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 45446605 - 45446535
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| || ||||||| | ||||||    
T  45446605 tttgatttgtaaaactgtttcaggtacacgacaaactggaggcaagggacaggataaaaactcatattttt 45446535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 29672278 - 29672375
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    ||||||| || ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  29672278 tttgattcgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 29672375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 45114231 - 45114170
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaac 88  Q
    ||||||||||||||| |||| || | |||||||||| ||||||||||||| ||| |||||||    
T  45114231 gacatgacaacttcaattgttcagtgtttgatttgtaaaactgtttcaggtacagaacaaac 45114170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 7394780 - 7394848
Alignment:
Q  64 aaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||||||||| |||  ||||||| ||| |||| ||||||||||||||| | |||||| || |||||    
T  7394780 aaactgtttcaggtacatgacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcac 7394848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 50729455 - 50729554
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||| ||| ||||    
T  50729455 acaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtctatcac 50729554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 9948105 - 9948000
Alignment:
Q  31 atgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctct 129  Q
    ||||||| |||| ||||| ||| |||||||||| ||||||||| |||||||  ||||||| ||| |||||||||||||||||||| ||||| ||||| ||    
T  9948105 atgacaatttcaattgtataatgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaactaaaattcttatccct 9948006  T
Q  130 cactaa 135  Q
    ||||||    
T  9948005 cactaa 9948000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 26083492 - 26083413
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||| ||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||| || |||||    
T  26083492 tttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccctcac 26083413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 50178405 - 50178495
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  50178405 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 50178495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 37865906 - 37865809
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  |||| |||||| |||||||||||||||||||| | |||||| || ||||| || ||||||| ||||||    
T  37865906 tttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctcaccaaatcacaacacaactt 37865809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 39078844 - 39078735
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||| ||||||| || | |||||||||| ||||||||||||| ||| |||||||||||| ||||||| | ||||||| ||||||||||    
T  39078844 acatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttt 39078745  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  39078744 tgtccctcac 39078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 36497370 - 36497291
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||||||||||||| |||||||||| | |||||| || |||||    
T  36497370 tttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaaaaactcatatttttgtccctcac 36497291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 44649096 - 44649167
Alignment:
Q  52 ttttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    ||||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  44649096 ttttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 44649167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 11056215 - 11056125
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||||| ||||||    
T  11056215 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactgatattttt 11056125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 20517955 - 20518043
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcaca 141  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||||||| |||||||| | | |||||| || ||||| || |||||    
T  20517955 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcaca 20518043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 3649789 - 3649710
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||| ||||||||| || |||| |||| |||||||||| |||||||| || |||||    
T  3649789 tttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactaaaatttttgtccctcac 3649710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 20802464 - 20802543
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||| | |||||| || |||||    
T  20802464 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcac 20802543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 36886085 - 36886006
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  36886085 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 36886006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 52949869 - 52949803
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  52949869 atttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 52949803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 33176965 - 33177062
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  33176965 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 33177062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 38812673 - 38812576
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  38812673 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 38812576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 4325944 - 4325865
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| || ||||||| | |||||| ||||||||    
T  4325944 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctcac 4325865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 29785470 - 29785549
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  |||||||||||||||| ||||  ||||||||| | |||||| || |||||    
T  29785470 tttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacagaacaaaaactcatatttttgtccctcac 29785549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 38486190 - 38486269
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  | ||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  38486190 tttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 38486269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 29593048 - 29592978
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||  |||| ||||||||||||||| | ||||||    
T  29593048 tttgatttgtaaaactgtttcaggtacaggacaaactggatgcaagggacatgacaaaaactcatattttt 29592978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 46680443 - 46680513
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  46680443 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 46680513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 47642424 - 47642494
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  |||||||||||  |||||||| || ||||||||| ||||||    
T  47642424 tttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactgatattttt 47642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 55065265 - 55065363
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactgga-gacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||| |||||||||| | |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  55065265 tttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 55065363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 7554890 - 7554951
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||| | ||||||||||||| |  |||||||||||| |||||||    
T  7554890 tttgatttgtaaaactgtttcatgtacaaaacaaactgaatgcaagagacatgataaaaact 7554951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 21202892 - 21202831
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| ||||||||| ||||||||||    
T  21202892 tttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaact 21202831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 24210472 - 24210411
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| ||||||||||    
T  24210472 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaact 24210411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 44324245 - 44324354
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||| ||||||| || | |||||||||| ||||||||||||| |||  ||||||| ||| ||| ||||  |||||||||||| |||||    
T  44324245 acatgacagaacaactccagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttt 44324344  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  44324345 tgtccctcac 44324354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 49152037 - 49152130
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||| ||||||||||||| |||| ||||||||||  |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  49152037 atttgtaaaactgtttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 49152130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 9807334 - 9807238
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||| ||||||||||||||| || | |||||||||| ||||||||||||| |||| ||||||| ||  |||  |||| |||||||||| || |||||    
T  9807334 gacaggacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaacttttt 9807238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 30942942 - 30942862
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgac-aaaaactgaaatttttatctctcac 132  Q
    |||||||| | ||||||||||||| ||| |||||| ||||| ||||||||  ||| |||||||||||||| | ||||||||    
T  30942942 tttgatttataaaactgtttcagggacagaacaaattggaggcaagagacgggacaaaaaactgaaatttctgtctctcac 30942862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 52673934 - 52673882
Alignment:
Q  83 acaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaa 135  Q
    ||||||||||| |||| |||||||||||||| ||||||||| || ||||||||    
T  52673934 acaaactggagtcaagggacatgacaaaaacagaaatttttgtccctcactaa 52673882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 1231464 - 1231385
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  | ||||||||| ||||||||  |||||||||| | |||||| || |||||    
T  1231464 tttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagactggacaaaaactcatatttttgtccctcac 1231385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 2629884 - 2629963
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||  ||||||||||||||| | |||||| || |||||    
T  2629884 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcac 2629963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 21580179 - 21580100
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||| |||| |||||||||| | |||||| || |||||    
T  21580179 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 21580100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 24002492 - 24002413
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| |||| |||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  24002492 tttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24002413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 36743621 - 36743680
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    ||||| |||| ||||||||||||| |||  ||||||||||| |||| |||||||||||||    
T  36743621 tttgaattgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaa 36743680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 44640496 - 44640417
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    ||||||||||||||||| | |||||||||| |||||||||  |||| |  ||||||| ||| ||||||||| ||||||||    
T  44640496 acaacttcagttgtacagtgtttgatttgtaaaactgtttatggaaaatgacaaactagaggcaagagacaagacaaaaa 44640417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 47666961 - 47667048
Alignment:
Q  34 acaacttcagttgtacaatttt-gatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatt 120  Q
    ||||||| |||||||||| ||| ||||||| ||||||||||||||| | || |||||| || ||||| | |||| ||||| |||||||    
T  47666961 acaactttagttgtacaactttcgatttgtaaaactgtttcaggaatagaataaactgaaggcaagatatatgataaaaattgaaatt 47667048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 52319476 - 52319397
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| ||| |||||| | |||||| || |||||    
T  52319476 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctcac 52319397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 53200576 - 53200655
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||  ||||||||||||  |||  | ||||||||| ||||  ||||||||||||||||||||||| || |||||    
T  53200576 tttgatttgcaaaactgtttcagagacaggataaactggaggcaaggaacatgacaaaaactgaaatttttgtccctcac 53200655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 55996944 - 55996845
Alignment:
Q  31 atgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctct 129  Q
    ||||||| ||||| | |||||| |||||||||| ||||| ||| |   ||||||||||||||| | || ||||| ||||||||| |||||| ||||||||    
T  55996944 atgacaatttcagatttacaatgtttgatttgtaaaactattttaaagacaaaacaaactggaaataaaagacacgacaaaaacagaaattcttatctct 55996845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 9512273 - 9512343
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||| | ||||||||| ||||  ||| |||||||||| | ||||||    
T  9512273 tttgatttgtaaaactgtttcaggtacaagataaactggaggcaagtaacaggacaaaaactcatattttt 9512343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 12601039 - 12600969
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| |||||||| |||  |||||||||||| ||| |||| |||||||||| | ||||||    
T  12601039 tttgatttgtaaaacagtttcaggtacaggacaaactggagataagggacaagacaaaaactcatattttt 12600969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 34930068 - 34929998
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||  ||| || ||||||||| |||| |||| |||||||||| | ||||||    
T  34930068 tttgatttgtaaaactgtttcagatacagaataaactggaggcaagggacaggacaaaaactcatattttt 34929998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 50727846 - 50727916
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  |||||||| || |||| |||| |||||||||| | ||||||    
T  50727846 tttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatattttt 50727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 50735860 - 50735930
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  |||||||| || |||| |||| |||||||||| | ||||||    
T  50735860 tttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatattttt 50735930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 23522033 - 23521936
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||  |||| || | |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  23522033 tttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 23521936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 32181442 - 32181337
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    ||||||||||||| |||||| || | |||||||||| ||||||||||| | |||  ||||||| ||  |||| |||| |||||||||| | |||||| ||    
T  32181442 gacatgacaactttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtc 32181343  T
Q  127 tctcac 132  Q
     |||||    
T  32181342 cctcac 32181337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 55594038 - 55593977
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||  | ||||||||| |||| |||| ||||||||||    
T  55594038 tttgatttgtaaaactgtttcaggtacatgataaactggaggcaagggacaggacaaaaact 55593977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 47741450 - 47741386
Alignment:
Q  26 atgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaact 89  Q
    ||||||||||||||||| ||||||||| ||| |||||| ||||| |||| | ||||| |||||||    
T  47741450 atgacatgacaacttcaattgtacaatgtttaatttgtaaaactatttctgaaacaacacaaact 47741386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 6896355 - 6896239
Alignment:
Q  17 atgaaacacatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactg 115  Q
    |||||| ||| ||||  |||||||||||||| || | |||||||||| ||||||||||||| |||||||||||||||| |||| |||| || ||||||||    
T  6896355 atgaaagacaggacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagggacaggataaaaactg 6896256  T
Q  116 aaatttttatctctcac 132  Q
    |||||||| || |||||    
T  6896255 aaatttttgtccctcac 6896239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 41366050 - 41366129
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||||||||||| |||||||| |||  ||||||||||| ||||||| | ||||||||||||||||||| || |||||    
T  41366050 tttgatttgtgaaacagtttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcac 41366129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 44284779 - 44284697
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaa 135  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||| | |||||| || ||||||||    
T  44284779 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcactaa 44284697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 8112450 - 8112353
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||| ||||||||| ||| |||||||||||| |||||||||  ||||||||| | |||||| |||||||| ||  |||||| ||||||    
T  8112450 tttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 8112353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 32766444 - 32766541
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||||| |||||| || ||||| ||  |||||| ||||||    
T  32766444 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 32766541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 38623214 - 38623323
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||| |||||||||||| | |||| |||||||||| ||||||||||||| |||  ||||||| ||| |||  || | ||||||||||||||||||    
T  38623214 acatgacataacaacttcagttatccaatgtttgatttgtaaaactgtttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttt 38623313  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  38623314 tgtccctcac 38623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 40832378 - 40832506
Alignment:
Q  23 cacatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattt 121  Q
    |||||||||| ||||||| |||||| || | |||||||||| || || ||||||| |||| ||||||||||| |||| |||| ||||||||| || ||||    
T  40832378 cacatgacataacaacttaagttgtccagtgtttgatttgtaaagctatttcaggtacaagacaaactggaggcaagggacaggacaaaaacggatattt 40832477  T
Q  122 ttatctctcactaattcacaacgcaactt 150  Q
    || || ||||| ||  |||||| ||||||    
T  40832478 ttgtccctcaccaaaccacaacacaactt 40832506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 9732870 - 9732967
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  9732870 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 9732967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 37308805 - 37308708
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  37308805 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 37308708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 40692443 - 40692386
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||||||||| ||| |||| |||||||||||||||| |||| ||||||||||    
T  40692443 atttgtgaaactgttttaggtacaagacaaactggagacaagggacaggacaaaaact 40692386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 30713047 - 30712931
Alignment:
Q  17 atgaaacacatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactg 115  Q
    |||||| ||||||||  |||||| ||||| | || | |||||||||| | ||||||||||| ||| ||||| |||||| |||| |||| |||| ||||||    
T  30713047 atgaaagacatgacaaaacaactccagttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaagggacaggacacaaactg 30712948  T
Q  116 aaatttttatctctcac 132  Q
    |||||||| || |||||    
T  30712947 aaatttttgtccctcac 30712931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 5278774 - 5278853
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  5278774 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 5278853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 7259047 - 7258968
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  7259047 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 7258968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 18685986 - 18685907
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||| | |||||| ||||||||    
T  18685986 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcac 18685907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 33366760 - 33366690
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  33366760 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 33366690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 34338960 - 34338890
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  34338960 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 34338890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 28824467 - 28824576
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||||||||||| || | |||||||||| ||||||||||||| |||  ||| ||||||| |||| | || |||||||||| | |||||    
T  28824467 acatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacagcacatactggagtcaagggtcaggacaaaaactcatatttt 28824566  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  28824567 tgtccctcac 28824576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 42706509 - 42706412
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| || | |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  42706509 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 42706412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 22980014 - 22979914
Alignment:
Q  24 acatgacatgacaacttcagttgtacaattttgatttgtgaaactgtttcaggaacaaaacaaactgga-gacaagagacatgacaaaaactgaaatttt 122  Q
    |||||||| ||||| || ||||||||||| || | |||| ||| ||||| |||||||  ||||| |||| |||||||||| ||||||||| |||| ||||    
T  22980014 acatgacaagacaatttaagttgtacaatgtttagttgtcaaaatgttttaggaacatgacaaaatggaggacaagagacttgacaaaaattgaactttt 22979915  T
Q  123 t 123  Q
    |    
T  22979914 t 22979914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 7761513 - 7761592
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  7761513 tttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 7761592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 17540865 - 17540786
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||| | |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  17540865 tttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 17540786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 35114935 - 35114856
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  35114935 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 35114856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 39461464 - 39461405
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| ||||||||    
T  39461464 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaa 39461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 32498065 - 32497995
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  |||||||| || |||| |||| |||||||||| | ||||||    
T  32498065 tttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatattttt 32497995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 38993011 - 38993081
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| |||||||||| |  ||||||||||| |||| |||| ||||||||||  |||||||    
T  38993011 tttgatttgtaaaacagtttcaggaagaggacaaactggaggcaagggacaggacaaaaactacaattttt 38993081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 42365727 - 42365657
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| |||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  42365727 tttgatttgtaaaaccgtttcaggtacatgacaaactggaggcaagggacaagacaaaaactcatattttt 42365657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 3913400 - 3913461
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| | |  ||||||||||| ||||| ||| ||||||||||    
T  3913400 tttgatttgtaaaactgtttcaggtatatgacaaactggaggcaagaaacaggacaaaaact 3913461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 22063731 - 22063811
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcacta 134  Q
    |||||||||| ||| ||||||| ||||| || ||| ||||| |||| ||||||| |||| |||||||| || ||||||||||    
T  22063731 tttgatttgtaaaattgtttcaagaacacaataaattggaggcaagggacatgataaaa-ctgaaattattgtctctcacta 22063811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 30326272 - 30326333
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||  ||||||||||| || | |||| ||||||||||    
T  30326272 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggggacaggacaaaaact 30326333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 2086213 - 2086173
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggag 93  Q
    |||||||||| ||||||||||||| |||| |||||||||||    
T  2086213 tttgatttgtaaaactgtttcaggtacaagacaaactggag 2086173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 4641664 - 4641624
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggag 93  Q
    |||||||||| ||||||||||||| |||| |||||||||||    
T  4641664 tttgatttgtaaaactgtttcaggtacaagacaaactggag 4641624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 3867583 - 3867662
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||| || |||||    
T  3867583 tttgatttgtaaaactgtttcagggacagaacatactggagacaagagacatgacaaaacctgaaatttttgtccctcac 3867662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 19906933 - 19906834
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||| ||||||||| ||| |||||||||||| |||| |||| ||||||||||||||||||| || |||||    
T  19906933 acaacttcagttgtccagtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcac 19906834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 31882926 - 31883026
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||| ||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| |||||    
T  31882926 acatgacagaacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacacgacaaaaactgatatttt 31883025  T
Q  123 t 123  Q
    |    
T  31883026 t 31883026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 41682967 - 41683050
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactga 116  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| ||||||||||||    
T  41682967 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaagacaaaaactga 41683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 33364692 - 33364782
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | ||| |||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  33364692 acaacttcagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 33364782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 50386390 - 50386460
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||||||||||||||||| ||| ||||||    
T  50386390 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacatgacaaaaattgatattttt 50386460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 12349079 - 12349184
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    ||||| |||||| ||||||| || | |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| ||    
T  12349079 gacataacaactccagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc 12349178  T
Q  127 tctcac 132  Q
    ||||||    
T  12349179 tctcac 12349184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 49748845 - 49748942
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||  ||||||||||||||||| |||||| || ||||| ||  |||||| ||||||    
T  49748845 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 49748942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 24571432 - 24571353
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  24571432 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24571353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 25860355 - 25860434
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  25860355 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 25860434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 40094654 - 40094575
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  40094654 tttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 40094575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 29585026 - 29584929
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  29585026 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 29584929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 39052772 - 39052869
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||| | |||||| |||||||| ||  |||||| ||||||    
T  39052772 tttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 39052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 34026818 - 34026739
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| | |  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  34026818 tttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 34026739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 51259714 - 51259793
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  51259714 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 51259793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 3864609 - 3864679
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||| |||  |||| |||||||||| | ||||||    
T  3864609 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatattttt 3864679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 10747351 - 10747281
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||| ||| ||| |||  ||||||||||||||||||| | |||||||||||| ||||||    
T  10747351 tttgatttgtaaaactattttaggtacaggacaaactggagacaagagataggacaaaaactgatattttt 10747281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 39215404 - 39215474
Alignment:
Q  54 ttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttta 124  Q
    ||||||||| ||||||||||| |||||  |||||| ||||  ||| |||| ||||||||||||||||||||    
T  39215404 ttgatttgtaaaactgtttcaagaacaggacaaaccggaggtaagggacaagacaaaaactgaaattttta 39215474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 17264587 - 17264688
Alignment:
Q  35 caacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcact 133  Q
    |||||| | ||||||||| |||||||||| |||||||| ||  |||| ||||||| |||  ||||| ||||||||||| |||||||| |||||  |||||    
T  17264587 caactttaattgtacaatatttgatttgtaaaactgttacaaaaacataacaaacaggaagcaagatacatgacaaaagctgaaattattatccttcact 17264686  T
Q  134 aa 135  Q
    ||    
T  17264687 aa 17264688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 21374109 - 21373984
Alignment:
Q  26 atgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttta 124  Q
    ||||||| ||||||||||||||  | | |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| ||||||| || | ||||||     
T  21374109 atgacataacaacttcagttgtctagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacaggacaaaatctcatatttttg 21374010  T
Q  125 tctctcactaattcacaacgcaactt 150  Q
    || ||||| ||  |||||| ||||||    
T  21374009 tccctcaccaaaccacaacacaactt 21373984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 24721636 - 24721567
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    |||||||||| ||||||||||||| ||| ||||||||||||  ||  |||| |||||||||| |||||||    
T  24721636 tttgatttgtaaaactgtttcagggacagaacaaactggaggtaaaggacaggacaaaaactaaaatttt 24721567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 28675941 - 28675844
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| || | |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  28675941 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 28675844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 50678949 - 50678852
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||  ||||||||||||| |||  ||||||||||| |||   ||| |||||||||||| |||||| |||||||| ||  |||||| ||||||    
T  50678949 tttgatttgaaaaactgtttcaggtacaggacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactt 50678852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 51925146 - 51925239
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||||| |||||| || ||||| ||  |||||| ||||||    
T  51925146 atttgtaaaactgtttcaggtacatgacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactt 51925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 26847515 - 26847411
Alignment:
Q  17 atgaaacacatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactg 115  Q
    ||||| || |||||||||||||| || ||||| | | ||| |||||| ||||||||| ||  | | |||||| ||||| ||||||||| |||||||||||    
T  26847515 atgaagcatatgacatgacaactccacttgtatagtgtttaatttgtaaaactgtttaagtgatataacaaattggaggcaagagacaggacaaaaactg 26847416  T
Q  116 aaatt 120  Q
    |||||    
T  26847415 aaatt 26847411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 3964459 - 3964360
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||||||| || | |||||||||| ||||||||||| | |||  ||||| ||||| ||||  ||  ||||||||||||||||||| || |||||    
T  3964459 acaacttcagttgtccagtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcac 3964360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 20255195 - 20255116
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||  ||| |||||||||| | |||||| || |||||    
T  20255195 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcac 20255116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 20609582 - 20609661
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||| | |||| |||| |||||||||| | |||||| || |||||    
T  20609582 tttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcac 20609661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 44117090 - 44117020
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| |||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  44117090 tttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 44117020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 3695241 - 3695302
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| |||| |||| ||||||||||    
T  3695241 tttgatttgtaaaactgttttaggtacatgacaaactggaggcaagggacaggacaaaaact 3695302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 21221295 - 21221391
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  || |||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  21221295 tttgatttgtaaaactgtttcaggtacaggac-aactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 21221391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 22484678 - 22484735
Alignment:
Q  54 ttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaa 111  Q
    ||||||||| |||| |||||||| |||  ||||||||||| |||| ||||||||||||    
T  22484678 ttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaa 22484735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 134
Target Start/End: Original strand, 45605624 - 45605653
Alignment:
Q  105 gacaaaaactgaaatttttatctctcacta 134  Q
    ||||||||||||||||||||||||||||||    
T  45605624 gacaaaaactgaaatttttatctctcacta 45605653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 5e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 34176980 - 34176883
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||||||||||||| | |||||| |||||||| || ||||| | ||||||    
T  34176980 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactt 34176883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 3259833 - 3259736
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  3259833 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 3259736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 11675353 - 11675432
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||  |||| |||||||||||| |||||| ||||||||    
T  11675353 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctcac 11675432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 32409831 - 32409910
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  |||||||||||||||| |||| |||||||||| | |||||| || |||||    
T  32409831 tttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcac 32409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 11212407 - 11212346
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||  |||||||||||| ||| |||||||||||||||    
T  11212407 tttgatttgtaaaactgtttcaggtacaggacaaactggagataagggacatgacaaaaact 11212346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 18597137 - 18597234
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| | |  |||||| |||| |||| |||||||||||| ||||||||||| || ||||| ||  |||||| ||||||    
T  18597137 tttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactt 18597234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 32132359 - 32132456
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||| |||||| ||||||    
T  32132359 tttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaactt 32132456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 9614142 - 9614066
Alignment:
Q  36 aacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaa 111  Q
    ||||||||||||||||| |||||||||| ||||||||||| | |||  | ||||||||| |||| ||||||||||||    
T  9614142 aacttcagttgtacaatgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagggacatgacaaaa 9614066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 3379860 - 3379781
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||| | ||||||||||||  |||  ||||||||||| ||||||||| |||||||||||| |||||| || |||||    
T  3379860 tttgatttataaaactgtttcagatacaggacaaactggaggcaagagacaagacaaaaactgatatttttgtcgctcac 3379781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 3932786 - 3932865
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| | || |||||||||| | |||||| ||||||||    
T  3932786 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggggcaggacaaaaactcatatttttgtctctcac 3932865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 15276916 - 15276995
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  15276916 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 15276995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 24203512 - 24203433
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||| ||| |||  ||||||||||| ||||||||| |||||||||| | |||||| || |||||    
T  24203512 tttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcac 24203433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 10485307 - 10485237
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||| | ||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  10485307 tttgatttgtaaaattatttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 10485237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 32860201 - 32860131
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| |||||||| |||  ||||||||||| |||| |||||||||||| ||| |||||||    
T  32860201 tttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaattttt 32860131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 166902 - 166999
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| ||||| ||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  166902 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 166999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 14925409 - 14925514
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    |||||||||||||||||||| || | |||||||||| ||||||||||||| |||  ||||||| ||   ||| |||| |||||||||| | |||||| ||    
T  14925409 gacatgacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtc 14925508  T
Q  127 tctcac 132  Q
     |||||    
T  14925509 cctcac 14925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 31870050 - 31870176
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaa---aacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    ||||| |||||| ||||||| || | |||||||||| ||||||| ||||||||||   |||||||| ||| |||| ||||  ||||||||||| ||||||    
T  31870050 gacataacaactccagttgtccagtgtttgatttgtaaaactgtctcaggaacaacagaacaaactagaggcaagggacaaaacaaaaactgatattttt 31870149  T
Q  124 atctctcactaattcacaacgcaactt 150  Q
     || ||||| ||  |||||| ||||||    
T  31870150 gtccctcaccaaaccacaacacaactt 31870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 8177861 - 8177920
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    |||||||| | ||||||||||||| |||||||||||||||| |||| |||| || |||||    
T  8177861 tttgatttataaaactgtttcaggtacaaaacaaactggaggcaagggacaggataaaaa 8177920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 11382208 - 11382137
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctc 128  Q
    |||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| ||||    
T  11382208 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctc 11382137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 11613770 - 11613849
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||| ||||||||||  ||| |||||||||| | |||||| || |||||    
T  11613770 tttgatttgtaaaactgtttcaggtacaggacaaaatggagacaaggaacaggacaaaaactcatatttttgtccctcac 11613849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 24242814 - 24242735
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||  ||||||||| | |||||| || |||||    
T  24242814 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtccctcac 24242735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 10960150 - 10960080
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  |||||||| || |||| |||| |||||||||| | ||||||    
T  10960150 tttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggacaggacaaaaactcatattttt 10960080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 17867985 - 17867915
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| || ||||||| | ||||||    
T  17867985 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatattttt 17867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 17877768 - 17877698
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| || ||||||| | ||||||    
T  17877768 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatattttt 17877698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 29054506 - 29054436
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||| ||||||||||||  ||||| ||||  |||| |||||||||||||||  |||||||    
T  29054506 tttgatttgtaaaacagtttcaggaacaggacaaattggaagcaagggacatgacaaaaactacaattttt 29054436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 10324094 - 10324187
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  10324094 atttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 10324187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 11279278 - 11279181
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||| | |||  ||||||||||| || | |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  11279278 tttgatttgtaaaactgtttcaagtacaggacaaactggaggcatgggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 11279181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 329624 - 329545
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||  |||| ||||||||||||||||||| || |||||    
T  329624 tttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcac 329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 38301496 - 38301426
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||||| ||||||    
T  38301496 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatattttt 38301426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 48445671 - 48445605
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||||||||| ||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  48445671 atttgtaaaactgtttgagggacagaacaaactggaggcaagggacatgacaaaaactgaaattttt 48445605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 21785025 - 21784928
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||||||||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  21785025 tttgatttgtaaaactgtttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 21784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 47953344 - 47953265
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  47953344 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 47953265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 1870289 - 1870192
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||| | ||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  1870289 tttgatttgtaaaactgtttcaggtacaagataaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 1870192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 40753309 - 40753212
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| || ||||| | ||||||    
T  40753309 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 40753212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 10932498 - 10932577
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  10932498 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 10932577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 21408538 - 21408625
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaa 110  Q
    ||||||||||||| ||  ||||||||||| |||||||||| || ||||||  || |||| ||||||||||| |||| |||||||||||    
T  21408538 acatgacatgacatctctagttgtacaatatttgatttgtaaagctgtttttgggacaacacaaactggaggcaagggacatgacaaa 21408625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 41211141 - 41211220
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||| ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  41211141 tttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 41211220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 123
Target Start/End: Complemental strand, 1363810 - 1363720
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | |||||||||| ||| ||||||| | |||  ||||||||||| |||| |||||||||||| |||| ||||||    
T  1363810 acaacttcagttgtccagtgtttgatttgtaaaattgtttcatgtacaggacaaactggaggcaagggacatgacaaaagctgatattttt 1363720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 43158627 - 43158697
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  43158627 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattttt 43158697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 43368355 - 43368285
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| | |  ||||||||||| ||||||||  |||||||||||| ||||||    
T  43368355 tttgatttgtaaaactgtttcaggtataggacaaactggaggcaagagacgggacaaaaactgatattttt 43368285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 22724472 - 22724569
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| |||| |||||||| |||  ||||||||||| |||| || ||||||||| ||| ||||||| || ||||| ||  |||| ||||||||    
T  22724472 tttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaactt 22724569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 47316639 - 47316736
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||| ||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  47316639 tttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 47316736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 18470836 - 18470759
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| ||  ||||| |||||||||| | |||||| ||||||||    
T  18470836 tttgatttgtaaaactgtttcaggtacaggacaaactggaggca--agacaggacaaaaactcatatttttgtctctcac 18470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 26994166 - 26994245
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| ||||||| || | |||||| || |||||    
T  26994166 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctcac 26994245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 36769510 - 36769589
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||| || |||||    
T  36769510 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 36769589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 44748849 - 44748770
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| ||||  ||||||||| |||||||| || |||||    
T  44748849 tttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacagaacaaaaactcaaatttttgtccctcac 44748770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 3922648 - 3922714
Alignment:
Q  57 atttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  3922648 atttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatattttt 3922714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 18386678 - 18386620
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaa 111  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||    
T  18386678 tttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaa 18386620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 46627313 - 46627267
Alignment:
Q  52 ttttgatttgtgaaactgtttcaggaacaaaacaaactggagacaag 98  Q
    |||| |||||| ||||||||||||| |||||| ||||||||||||||    
T  46627313 tttttatttgtaaaactgtttcaggtacaaaataaactggagacaag 46627267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 11321796 - 11321905
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  ||||||  |||||| |||| |||||||||| |||||| |||||| |||  ||||||||||| |||  |||| |||||||||| | |||||    
T  11321796 acatgacagaacaactctagttgtccaatgtttgatttgtaaaactgattcaggtacaggacaaactggaggcaacggacaggacaaaaactcatatttt 11321895  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  11321896 tgtccctcac 11321905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 11822377 - 11822280
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    ||||||| || ||||||||| ||| |||  ||||||||||  |||| ||||||||||||||| | |||||| ||  |||||||  |||||| ||||||    
T  11822377 tttgattcgtaaaactgtttgaggtacaggacaaactggatgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactt 11822280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 26371750 - 26371847
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||  ||||| ||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || ||||| || ||||| | ||||||    
T  26371750 tttgatttgcaaaactatttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 26371847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 26700661 - 26700572
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    ||||||||| |||| | ||||||| || | ||||||||||  |||||||||||| |||  ||||||||||| ||||||| | ||||||||    
T  26700661 acatgacataacaattccagttgtccagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagagaaaggacaaaaa 26700572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 43189183 - 43189280
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||| | ||| ||||||||| |||  |||||||||||  ||| ||||||||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  43189183 tttgatttataaaaatgtttcaggtacaggacaaactggaggtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 43189280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 4689614 - 4689741
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||||||||||| || | |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| |||||||||  | |||||    
T  4689614 acatgacagaacaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttt 4689713  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    | || ||||| ||  |||||| ||||||    
T  4689714 tgtccctcaccaaaccacaacacaactt 4689741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 31770507 - 31770634
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||| ||||||  |||||| || | |||||||||| ||||||||||| | |||| ||||||||||| |||| |||| |||||||||| | |||||    
T  31770507 acatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagggacaggacaaaaactcatatttt 31770606  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    |||| ||||| ||  |||||| ||||||    
T  31770607 tatccctcaccaaaccacaacacaactt 31770634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 32528895 - 32528768
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    |||||||| |||||||  |||||| || | |||||||||| ||||||||||||| |||  |||||||||||||||| |||| |||||||||| | |||||    
T  32528895 acatgacaggacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttt 32528796  T
Q  123 tatctctcactaattcacaacgcaactt 150  Q
    | || ||||| ||  |||||| ||||||    
T  32528795 tgtccctcaccaaaccacaacacaactt 32528768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 18470374 - 18470444
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| ||| ||||||||| || |||| |||| |||||||||||||||||||    
T  18470374 tttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaagacaaaaactgaaattttt 18470444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 37148535 - 37148605
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||| |||  |||||||||||||||||||    
T  37148535 tttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacgggacaaaaactgaaattttt 37148605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 11963491 - 11963412
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  11963491 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 11963412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 28090466 - 28090545
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||||  |||||||||| |||| ||||||||||||||| | |||||| || |||||    
T  28090466 tttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 28090545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 553547 - 553450
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||| | ||||||||||| | |||  ||||||||||| ||||||||| |||||||||| | |||||| |||||||| ||  |||||| ||||||    
T  553547 tttgatttataaaactgtttcaagtacaggacaaactggaggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 553450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 4818086 - 4818165
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||  ||| |||||||||| | |||||| || |||||    
T  4818086 tttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcac 4818165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 7523322 - 7523243
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  7523322 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 7523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 21739107 - 21739186
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  21739107 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 21739186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 24181570 - 24181649
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  24181570 tttgatttgtaaaactgtttcaggtacaggacaaactggagccaagggacaggacaaaaactcatatttttgtccctcac 24181649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 39918657 - 39918578
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||  |||| ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  39918657 tttgatttgtaaaactgtttcagatacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 39918578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 22432255 - 22432325
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| |||||||||||||  ||  | ||||||||| ||||||||| |||||||||||| ||||||    
T  22432255 tttgatttgtaaaactgtttcaggttcaggataaactggaggcaagagacaggacaaaaactgatattttt 22432325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 8136987 - 8136890
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||| ||||| ||||||||||||  |||  ||||||||||| ||||||||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  8136987 tttgttttgtaaaactgtttcagatacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 8136890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 34795067 - 34794958
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  ||||||  |||||| |||| |||||||||| ||||||||||||| |||  ||||||| ||| |||| |||| |||||||||| | |||||    
T  34795067 acatgacagaacaactctagttgtccaatatttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttt 34794968  T
Q  123 tatctctcac 132  Q
    | || |||||    
T  34794967 tgtccctcac 34794958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 40489487 - 40489390
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| | || ||||||||||| |||| |||  |||||||||| | |||||| || ||||| || ||||| | ||||||    
T  40489487 tttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 40489390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 31880022 - 31880101
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    ||||||| || ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  31880022 tttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcac 31880101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 35701427 - 35701348
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| |||||||||| || |||  ||||||||||| |||| |||| |||||||||| | |||||| || |||||    
T  35701427 tttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 35701348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 5598630 - 5598560
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| || | ||||||||||| |||| || | ||||||||| || ||||||    
T  5598630 tttgatttgtaaaactgtttcaggtacgagacaaactggaggcaagggagaggacaaaaacagatattttt 5598560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 7725735 - 7725825
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||||||| || | ||||||| || ||| |||||||||  || |||||||||||  |||| ||||||||||||||| | ||||||    
T  7725735 acaacttcagttgtccagtgtttgattagtaaaattgtttcaggtgcagaacaaactggatgcaagggacatgacaaaaactcatattttt 7725825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 23091250 - 23091320
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  | ||||||||| |||| |||| |||||||||| | ||||||    
T  23091250 tttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagacaaaaactcatattttt 23091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 26180217 - 26180299
Alignment:
Q  31 atgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    ||||||||||||||| |||||| |||||||||| |||||||||  || |||  | ||| ||||||||| ||| ||||||||||    
T  26180217 atgacaacttcagttatacaatatttgatttgtaaaactgtttttgggacatgataaattggagacaaaagatatgacaaaaa 26180299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 32092928 - 32092998
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||| |||||||||||||  ||||| ||||| |||  || | |||||||||||||||||||    
T  32092928 tttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaattttt 32092998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 3735537 - 3735437
Alignment:
Q  24 acatgacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttt 122  Q
    ||||||||  |||||| ||||||| || | |||||||||| |||| |||||||| |||  ||||| ||||| |||  |||| |||||||||||| |||||    
T  3735537 acatgacagaacaactccagttgtccagtgtttgatttgtaaaaccgtttcaggtacatgacaaaatggaggcaatggacaggacaaaaactgatatttt 3735438  T
Q  123 t 123  Q
    |    
T  3735437 t 3735437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 7770225 - 7770285
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaac 113  Q
    |||||||||| ||| ||||||||| |||  ||||||||||| |||| |||| |||||||||    
T  7770225 tttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaac 7770285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 42896 - 42993
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| ||| |||||||||||| |||| ||||  |||||||||||||||| | || ||||| ||  |||||| ||||||    
T  42896 tttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactt 42993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 13633 - 13712
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||| ||||||||| ||| |||||||||||| |||| || | ||||||||||||||||||| || |||||    
T  13633 tttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctcac 13712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 5365 - 5444
Alignment:
Q  34 acaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaa 112  Q
    |||||||||||||| || | |||||||||| ||||||||||||| |||| ||||||||||| |||| |||| ||||||||    
T  5365 acaacttcagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaa 5444  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 372910 - 372989
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| ||| || |||||||||||||| || |||||||||||| | |||||| || |||||    
T  372910 tttgatttgtaaaactgtttcaggtacagaaaaaactggagacaagggatatgacaaaaactcatatttttgtccctcac 372989  T

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Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 1589 - 1686
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||| | | |  ||||||||||| |||| |||| ||||||||||||||||||| || ||||| ||  |||||| ||||||    
T  1589 tttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactt 1686  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 23725 - 23655
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||| ||| |||| ||||||||||||||| | ||||||    
T  23725 tttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacatgacaaaaactcatattttt 23655  T

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Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 20083 - 19975
Alignment:
Q  28 gacatgacaacttcagttgtacaat-tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatc 126  Q
    |||||||||| ||||||| |||| | |||||| ||| ||||||||| ||  | || ||||| || ||| ||| || |||||||||||||||||| || ||    
T  20083 gacatgacaatttcagttatacagtgtttgatatgtaaaactgttttagagataagacaaattgtagaaaagggatatgacaaaaactgaaattcttgtc 19984  T
Q  127 tctcactaa 135  Q
     ||||||||    
T  19983 actcactaa 19975  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 19102 - 19172
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| ||| || |||| |||| |||  |||| |||||||||||||||||||    
T  19102 tttgatttgtaaaactgtttcagggacagaataaacaggaggcaatggacaggacaaaaactgaaattttt 19172  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 15322 - 15252
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaattttt 123  Q
    |||||||||| ||||||||||||| |||  ||||||||||| |||| |||| |||||||||| | ||||||    
T  15322 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatattttt 15252  T

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Target: scaffold0169 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 150
Target Start/End: Original strand, 18000 - 18097
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaattcacaacgcaactt 150  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||| |||| |||||||||| | |||||| || ||||| ||  |||||| ||||||    
T  18000 tttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactt 18097  T

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Target: scaffold0208 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 2284 - 2363
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| ||||||||||||| |||  ||||| ||||| |||| |||| |||||||||| | |||||| || |||||    
T  2284 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 2363  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 51588 - 51509
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaactgaaatttttatctctcac 132  Q
    |||||||||| |||||||||||||  || |||||||||||  |||| |||| |||||||||| | |||||| || |||||    
T  51588 tttgatttgtaaaactgtttcaggtgcagaacaaactggatgcaagggacaagacaaaaactcatatttttgtccctcac 51509  T

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Target: scaffold0957 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 2442 - 2503
Alignment:
Q  53 tttgatttgtgaaactgtttcaggaacaaaacaaactggagacaagagacatgacaaaaact 114  Q
    |||||||||| ||||||||||||| |||| ||||| |||||  ||| |||| ||||||||||    
T  2442 tttgatttgtaaaactgtttcaggtacaagacaaattggaggaaagggacaggacaaaaact 2503  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 13555 - 13607
Alignment:
Q  83 acaaactggagacaagagacatgacaaaaactgaaatttttatctctcactaa 135  Q
    ||||| ||||| ||| |||||||||||||| |||||||| | |||||||||||    
T  13555 acaaattggaggcaatagacatgacaaaaattgaaatttgtgtctctcactaa 13607  T

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