View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3989_high_1 (Length: 509)
Name: NF3989_high_1
Description: NF3989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3989_high_1 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 439; Significance: 0; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 1 - 497
Target Start/End: Original strand, 6592468 - 6592949
Alignment:
| Q |
1 |
gccatctggttagataaagagtccaccgatcaatatcagtgacatcaatgtgatcccgagagagcttgaactttttgattggtccagaacggagtaaaag |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6592468 |
gccatctggttagataaagagtccaccgatcaatatcagtgacatcaatgtgatcccgagagagcttgaactttttgattggtccagaacggagtaaaag |
6592567 |
T |
 |
| Q |
101 |
tacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagtttcggagagacattcattatcaaacacaagatttggaagtgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6592568 |
tacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagtttcggagagacattcattatcaaacacaagatttggaagtgtg |
6592667 |
T |
 |
| Q |
201 |
gtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaatatggtctattacatggcctggtaaac |
300 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6592668 |
gtccatttgtacctccagttggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaatatggtctattacatggcctggtaaac |
6592767 |
T |
 |
| Q |
301 |
tactaactctatcgggctcctcgtctgatacgcaaggagactgggattgttctcttctcttcatagatatagtcagacaaaaactccaatattcagaaaa |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6592768 |
tactaactctatcgggctcctcgtctgatacgcaaggagactgggactgttctcttctcttcatagatatagtcagacaaaaactccaatattcagaaaa |
6592867 |
T |
 |
| Q |
401 |
caaattaggttactgtaaataaacaagctaatgtaacaattcattaaacaaaaacaacacaattaattattcctctgaatttaaattacaaaatgat |
497 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6592868 |
caaattaggttactgtaaataaacaagctaatgtaacaat---------------aacacaattaattattcctctgaatttaaattacaaaatgat |
6592949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 5 - 412
Target Start/End: Original strand, 6601721 - 6602129
Alignment:
| Q |
5 |
tctggttagataaagagtccaccgatcaatatcagtgacatcaatgtgatcccga---gagagcttgaactttttgattggtccagaacggagtaaaagt |
101 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| || || ||||| | || ||| ||||||||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
6601721 |
tctggttagatgaagagtccatcgatcaatatcggtcactccaatgagctcgcgatgggagagcttgaactttttgattggcccagaatggagtaaaagt |
6601820 |
T |
 |
| Q |
102 |
acatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagtttcggagagacattcattatcaaacacaagatttggaagtgtgg |
201 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
6601821 |
acatgatcaataattctcgaaagtttgctcttgataactaaaaggtcttcagaagtgtcggagatacattggctatcaaacacaagatttggaagtgtgg |
6601920 |
T |
 |
| Q |
202 |
tccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaatatggtctattacatggcctggtaaact |
301 |
Q |
| |
|
||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||| |
|
|
| T |
6601921 |
cccatttgtacctccatttggttgataaaatacttgttctcactgcttccttaattggcaaaattgagagaatttggtctattatatgacctggtaaact |
6602020 |
T |
 |
| Q |
302 |
actaactctatcgggctcctcgtctgatacgcaaggagactgggattgttctcttctcttcatagatatagtcagacaaaaactccaatattcagaaaac |
401 |
Q |
| |
|
||||| ||||||||||||| | || | |||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||| | ||||||||| |
|
|
| T |
6602021 |
actaattctatcgggctccgcatccgttacgcaaggagactgggattgttcccttctctt--tagatatattcagacaaaagatccaagaatcagaaaac |
6602118 |
T |
 |
| Q |
402 |
aaattaggtta |
412 |
Q |
| |
|
||| ||||||| |
|
|
| T |
6602119 |
aaaataggtta |
6602129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 217
Target Start/End: Complemental strand, 2010560 - 2010402
Alignment:
| Q |
59 |
agagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagtt |
158 |
Q |
| |
|
||||||||||||||| |||||||| || ||| |||||||||||||||||||||||| ||||||| |||| |||||||||| || | || ||| |
|
|
| T |
2010560 |
agagagcttgaacttgttgattggcccggaataaagtaaaagtacatgatcaataattgccaaaagctttctctcgataactaaagggcgatgggatgtt |
2010461 |
T |
 |
| Q |
159 |
tcggagagacattcattatcaaacacaagatttggaagtgtggtccatttgtacctcca |
217 |
Q |
| |
|
| |||| ||||| |||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
2010460 |
gcagagacacattgtttatcaaacacaagatttggtattgtggtccatttgtacctcca |
2010402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 326
Target Start/End: Complemental strand, 2011971 - 2011703
Alignment:
| Q |
58 |
gagagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagt |
157 |
Q |
| |
|
|||||||||||||||| |||||||| ||| || |||||||||||||| || |||||| ||||||| ||||||||| || | ||| || ||| || |
|
|
| T |
2011971 |
gagagagcttgaacttgttgattggcccataataaagtaaaagtacatggtcgataattgccaaaagctttctcttgatagctgcagggtgttcagatgt |
2011872 |
T |
 |
| Q |
158 |
ttcggagagacattcattatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaatt |
257 |
Q |
| |
|
| | || | ||||| |||||||||||||||||| | |||| |||||||||||||||| | | | ||||||||||||||||| | | ||| ||||| |
|
|
| T |
2011871 |
tgcagacacacattgtgaatcaaacacaagatttggtattgtgatccatttgtacctccatttgtttgataaaatacttgttctcacaacatccctaatt |
2011772 |
T |
 |
| Q |
258 |
ggcaaaatcgagagaatatggtctattacatggcctggtaaactactaactctatcgggctcctcgtct |
326 |
Q |
| |
|
||||| || | ||| |||||||||||| ||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
2011771 |
ggcaagcatgacaaaatccggtctattacatcacctggtaaaacactaattctatccggctcctcgtct |
2011703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 258
Target Start/End: Complemental strand, 3340509 - 3340317
Alignment:
| Q |
69 |
aactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaagtttc---ggaga |
165 |
Q |
| |
|
||||| |||||||| |||||| | ||||||||||||||||||| ||||||| ||| |||||||| |||||| || ||| ||| |||||||| || | |
|
|
| T |
3340509 |
aacttgttgattggcccagaatgaagtaaaagtacatgatcaacaattcttaaaaacttgctctcaataactgaagggtgtttggaagtttcagtagata |
3340410 |
T |
 |
| Q |
166 |
gacattcattatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattg |
258 |
Q |
| |
|
||||||| |||||||||||||| ||| | |||| |||||| | ||||| | | | ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
3340409 |
cacattcacgatcaaacacaagatctggtaaagtggaccatttctttctccaattgctcgataaaacacttgttcttactgcttccttaattg |
3340317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 313
Target Start/End: Complemental strand, 3372578 - 3372444
Alignment:
| Q |
179 |
aaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaatatgg |
278 |
Q |
| |
|
||||||||||||||| |||||| |||||||| ||||||| | | ||||||| ||||||||| ||||||| |||||||||| | |||||||| || |
|
|
| T |
3372578 |
aaacacaagatttggtagtgtgtaccatttgttcctccagctgctggataaaacacttgttctcactgcttctttaattggcatgagtgagagaatctga |
3372479 |
T |
 |
| Q |
279 |
tctattacatggcctggtaaactactaactctatc |
313 |
Q |
| |
|
||||||||||| |||||||| | ||||| |||||| |
|
|
| T |
3372478 |
tctattacatgacctggtaagcaactaattctatc |
3372444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 326
Target Start/End: Complemental strand, 2006347 - 2006195
Alignment:
| Q |
174 |
ttatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaa |
273 |
Q |
| |
|
|||||||||||||||||||| | ||||| ||||||||||||||| | | | ||||||| ||||||||| | |||||| |||||||||| || |||| |
|
|
| T |
2006347 |
ttatcaaacacaagatttggtattgtggcccatttgtacctccatttgttggataaaacacttgttctcacagcttccctaattggcaagtgtgacagaa |
2006248 |
T |
 |
| Q |
274 |
tatggtctattacatggcctggtaaactactaactctatcgggctcctcgtct |
326 |
Q |
| |
|
| | ||||||||||| ||| ||||| ||||| |||||| |||||| ||||| |
|
|
| T |
2006247 |
tcttgtctattacatcacctagtaaataactaattctatccggctccccgtct |
2006195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 262
Target Start/End: Complemental strand, 3361720 - 3361523
Alignment:
| Q |
68 |
gaactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctttagaa---gtttcggag |
164 |
Q |
| |
|
|||||| |||||||| ||| || | ||||||||||||||||||| |||||| ||| |||| | |||||||| || |||||| ||| || || ||| |
|
|
| T |
3361720 |
gaacttgttgattggcccataatgaagtaaaagtacatgatcaacaattctcaaaaacttgttattgataaccgaagggtcttgggaatctgtatcagag |
3361621 |
T |
 |
| Q |
165 |
agacattcattatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaa |
262 |
Q |
| |
|
| || | |||||||| ||||||||||| || ||| |||||||| ||||| | | | ||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
3361620 |
atgcaatgtttatcaaatacaagatttggtagcgtgtaccatttgttactccatttgctggataaaatacttgttctcactgcttccttgattggcaa |
3361523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 2948497 - 2948579
Alignment:
| Q |
69 |
aactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtcttt |
151 |
Q |
| |
|
||||| |||||||| |||||| | ||||||||||||||||||| |||||| ||| |||||||| |||||| || ||||||| |
|
|
| T |
2948497 |
aacttgttgattggcccagaatgaagtaaaagtacatgatcaacaattctcaaaaacttgctctcaataactgaagggtcttt |
2948579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 2019773 - 2019716
Alignment:
| Q |
59 |
agagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaataatt |
116 |
Q |
| |
|
||||||||||||||| |||||||| || ||| |||||||||||||||||||||||| |
|
|
| T |
2019773 |
agagagcttgaacttgttgattggcccggaataaagtaaaagtacatgatcaataatt |
2019716 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 3218662 - 3218806
Alignment:
| Q |
176 |
atcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaata |
275 |
Q |
| |
|
||||||||||| |||||| |||||| |||||| | |||||| | | || |||| ||||||| | |||||||| |||||||||| |||||||| |
|
|
| T |
3218662 |
atcaaacacaatatttggtagtgtgtgccatttattcctccattcactggacaaaacacttgttttcactgcttccctaattggcaagtatgagagaatc |
3218761 |
T |
 |
| Q |
276 |
tggtctattacatggcctggtaaactactaactctatcgggctcc |
320 |
Q |
| |
|
|| ||||||||||| |||||||| | ||||| |||||| |||||| |
|
|
| T |
3218762 |
tgatctattacatgacctggtaagcaactaattctatccggctcc |
3218806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 3218540 - 3218611
Alignment:
| Q |
60 |
gagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctc |
131 |
Q |
| |
|
||||||| |||||| ||||| ||||||||| | |||| |||||||||||||| |||||| | ||||||||| |
|
|
| T |
3218540 |
gagagctggaacttgttgatcggtccagaatgaagtagaagtacatgatcaacaattctcaacagcttgctc |
3218611 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 3349383 - 3349320
Alignment:
| Q |
69 |
aactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctct |
132 |
Q |
| |
|
||||| |||||| | |||||| | |||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
3349383 |
aacttgttgattagcccagaatgaagtaaaagtacatgatcaataattctcaaaaacttgctct |
3349320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 3372693 - 3372620
Alignment:
| Q |
67 |
tgaactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataact |
140 |
Q |
| |
|
||||||| |||||||| |||||| | |||||||||||||||||| |||||| ||| |||| | ||||||||| |
|
|
| T |
3372693 |
tgaacttgttgattggaccagaatgttgtaaaagtacatgatcaacaattctcaaaaacttgttattgataact |
3372620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 3378726 - 3378665
Alignment:
| Q |
78 |
attggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataac |
139 |
Q |
| |
|
||||| |||||| | ||||||||||||||||| |||||||| ||| |||||||| |||||| |
|
|
| T |
3378726 |
attggcccagaatgaagtaaaagtacatgatcgataattctcaaaaacttgctctcgataac |
3378665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 4335023 - 4335080
Alignment:
| Q |
59 |
agagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaataatt |
116 |
Q |
| |
|
||||| ||||||| | ||||||||||||||| | | ||||||||||||||||| |||| |
|
|
| T |
4335023 |
agagaacttgaacatgttgattggtccagaatgaactaaaagtacatgatcaacaatt |
4335080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 298
Target Start/End: Complemental strand, 20934365 - 20934229
Alignment:
| Q |
162 |
gagagacattcattatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggca |
261 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||| |||||||| |||||| | ||||||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
20934365 |
gagagacattgtctatcaaacacaagatttgggagtgtgtaccatttgttcctccattttttagataaaacacttgttctcactgcttccctaattggca |
20934266 |
T |
 |
| Q |
262 |
aaatcgagagaatatggtctattacatggcctggtaa |
298 |
Q |
| |
|
| | ||||| |||||||||||||| |||||||| |
|
|
| T |
20934265 |
agtaagtcagaatctggtctattacatgacctggtaa |
20934229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 39273941 - 39273803
Alignment:
| Q |
175 |
tatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaat |
274 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||||| | | | || |||| ||||||||| |||||||| |||||||||| || ||||| |
|
|
| T |
39273941 |
tatcaaacacaagatttggtagtgtgtaccatttgtacctccattggctggacaaaacacttgttctcactgcttccctaattggcaagcaagacagaat |
39273842 |
T |
 |
| Q |
275 |
atggtctattacatggcctggtaaactactaactctatc |
313 |
Q |
| |
|
|| ||||||||||| || ||||| | ||||| |||||| |
|
|
| T |
39273841 |
ctgatctattacatgacccggtaagcaactaattctatc |
39273803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 20952896 - 20952809
Alignment:
| Q |
175 |
tatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaa |
262 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||| | ||||||||| ||||||||| |||| ||| ||||| |||| |
|
|
| T |
20952896 |
tatcaaacacaagatttggaagtgtgttccatttgttcctccattttctagataaaacacttgttctcactgcatccctaatttgcaa |
20952809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 327
Target Start/End: Complemental strand, 20923370 - 20923217
Alignment:
| Q |
174 |
ttatcaaacacaagatttggaagtgtggtccatttgtacctccagtaggtagataaaatacttgttctggctgcttccttaattggcaaaatcgagagaa |
273 |
Q |
| |
|
||||| |||||||||| || |||||| |||||| | |||||| | | ||||||||| ||||||||| |||||||||| |||| ||| || |||| |
|
|
| T |
20923370 |
ttatcgaacacaagatccggttgtgtggaccattttttcctccatttgttagataaaacacttgttctccctgcttccttgattgacaagcgtgaaagaa |
20923271 |
T |
 |
| Q |
274 |
tatggtctattacatggcctggtaaactactaactctatcgggctcctcgtctg |
327 |
Q |
| |
|
||||||||||| ||| ||||||| | ||||| |||||||| ||||| ||||| |
|
|
| T |
20923270 |
aatggtctattatatgatctggtaagcaactaattctatcggactccttgtctg |
20923217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 20923488 - 20923436
Alignment:
| Q |
59 |
agagagcttgaactttttgattggtccagaacggagtaaaagtacatgatcaa |
111 |
Q |
| |
|
||||| ||||||||| |||||||| |||||| | |||||||||||||| |||| |
|
|
| T |
20923488 |
agagatcttgaacttgttgattggcccagaatgaagtaaaagtacatggtcaa |
20923436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 17969862 - 17969781
Alignment:
| Q |
69 |
aactttttgattggtccagaacggagtaaaagtacatgatcaataattcttgaaagcttgctcttgataactaaaaggtctt |
150 |
Q |
| |
|
||||| |||||||| || ||| | |||||||||||||||||||| ||||| ||| ||||| || ||||||| ||| ||||| |
|
|
| T |
17969862 |
aacttgttgattggccctgaatgaagtaaaagtacatgatcaatgattctcaaaaacttgccctcgataactgaaaagtctt |
17969781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University