View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3989_high_7 (Length: 254)
Name: NF3989_high_7
Description: NF3989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3989_high_7 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 32416760 - 32416998
Alignment:
| Q |
19 |
aatgtaccactgtagagaaactctaggagagattctagttcttcatggtttaggtcaggtatagttattgtgttacaagttggtgcagctttacattcat |
118 |
Q |
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| T |
32416760 |
aatgtaccactgtagagaaactctaggagagattctagttcttcatggtttaggtcaggtatagttattgtgttacaagttggtgcagctttacattcat |
32416859 |
T |
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| Q |
119 |
caatctctagcatattcttgaaaatttctgatcttgcagcctacattataataacatatgtgttcatttgatatacatctgaatttcaaatgcccaagaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32416860 |
caatctctagcatattcttgaaaatttctgatcttgcagcctacattataataacatatgtgttcatttgatatacatctgaatttcaaatgcccaagaa |
32416959 |
T |
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| Q |
219 |
ataaaagaa---taacatatttcttaaaatagggtatgc |
254 |
Q |
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||||||||| ||||||||||||||||||||||||||| |
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| T |
32416960 |
ataaaagaatagtaacatatttcttaaaatagggtatgc |
32416998 |
T |
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