View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3991_high_25 (Length: 227)
Name: NF3991_high_25
Description: NF3991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3991_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 41736527 - 41736725
Alignment:
| Q |
1 |
aaagaaattacgtccattatgaagcaaactcttgtgttgatgatgctctagctcttagaggtcatgatgtctaatgttaaattttccattaaaggaaata |
100 |
Q |
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| T |
41736527 |
aaagaaattacgtccattatgaagcaaactcttgtgttgatgatgctctagctcttagaggtcatgatgtctaatgttaaattttccattaaaggaaata |
41736626 |
T |
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| Q |
101 |
ttgtcatcgaaagggtttagagtcctaaaccctaacaagtatctcaatgatacttgttaatccagcgacatttgttaaggaattgtaaaatgaaatata |
199 |
Q |
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| T |
41736627 |
ttgtcatcgaaagggtttagggtcctaaaccctaacaagtatctcaatgatacttgttaatccagcgacattagttaaggaattgtaaaaggaaatata |
41736725 |
T |
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