View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3991_low_4 (Length: 554)

Name: NF3991_low_4
Description: NF3991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3991_low_4
NF3991_low_4
[»] chr4 (56 HSPs)
chr4 (10-148)||(53003798-53003936)
chr4 (220-382)||(19503138-19503302)
chr4 (211-370)||(32202505-32202666)
chr4 (237-372)||(43944505-43944642)
chr4 (231-370)||(28755621-28755761)
chr4 (215-374)||(789558-789720)
chr4 (237-373)||(15186240-15186378)
chr4 (220-377)||(29591182-29591342)
chr4 (213-344)||(12356272-12356404)
chr4 (211-370)||(54897308-54897470)
chr4 (233-372)||(33108720-33108860)
chr4 (233-342)||(39843937-39844046)
chr4 (220-376)||(7768932-7769091)
chr4 (214-372)||(16536046-16536207)
chr4 (217-322)||(30387164-30387270)
chr4 (211-348)||(54655900-54656038)
chr4 (230-371)||(4089141-4089285)
chr4 (215-370)||(24679671-24679827)
chr4 (212-372)||(46148939-46149100)
chr4 (257-348)||(32217069-32217160)
chr4 (237-374)||(47231923-47232062)
chr4 (214-348)||(50619110-50619245)
chr4 (214-348)||(54945806-54945940)
chr4 (220-370)||(3783534-3783687)
chr4 (209-372)||(5091633-5091798)
chr4 (250-348)||(42898810-42898908)
chr4 (237-371)||(4268873-4269009)
chr4 (237-371)||(18067930-18068066)
chr4 (214-342)||(36395129-36395258)
chr4 (238-372)||(37987934-37988069)
chr4 (209-372)||(43202405-43202571)
chr4 (237-373)||(52533836-52533974)
chr4 (220-371)||(55882683-55882835)
chr4 (220-341)||(4220226-4220347)
chr4 (215-348)||(6164118-6164251)
chr4 (250-370)||(54054548-54054670)
chr4 (231-346)||(49915185-49915301)
chr4 (233-350)||(31680510-31680627)
chr4 (256-344)||(42815137-42815225)
chr4 (253-348)||(30154230-30154324)
chr4 (250-347)||(46688269-46688371)
chr4 (214-370)||(53655905-53656062)
chr4 (211-292)||(53003980-53004062)
chr4 (225-300)||(39877287-39877363)
chr4 (209-341)||(52697083-52697215)
chr4 (257-345)||(50603254-50603342)
chr4 (297-347)||(1432653-1432703)
chr4 (239-321)||(41265510-41265591)
chr4 (280-348)||(50167615-50167681)
chr4 (239-328)||(53268764-53268852)
chr4 (239-297)||(8133782-8133840)
chr4 (263-320)||(31517217-31517274)
chr4 (214-312)||(16820912-16821011)
chr4 (251-346)||(3999451-3999546)
chr4 (318-373)||(8133731-8133787)
chr4 (313-351)||(39877554-39877592)
[»] chr8 (50 HSPs)
chr8 (209-372)||(27988521-27988687)
chr8 (209-372)||(28045823-28045989)
chr8 (215-372)||(4648193-4648352)
chr8 (214-370)||(30675600-30675758)
chr8 (220-373)||(168463-168619)
chr8 (238-369)||(16888596-16888728)
chr8 (214-370)||(34228682-34228841)
chr8 (220-346)||(33357162-33357289)
chr8 (220-372)||(4537777-4537932)
chr8 (214-372)||(9063079-9063239)
chr8 (230-372)||(16785085-16785229)
chr8 (211-369)||(21595848-21596008)
chr8 (233-340)||(16890527-16890634)
chr8 (214-368)||(20831580-20831737)
chr8 (214-371)||(3930260-3930419)
chr8 (238-345)||(36730471-36730578)
chr8 (211-348)||(9253926-9254063)
chr8 (227-370)||(10870357-10870498)
chr8 (220-345)||(11112666-11112792)
chr8 (211-348)||(29444164-29444302)
chr8 (237-370)||(37373206-37373340)
chr8 (209-348)||(28626792-28626932)
chr8 (220-346)||(42035014-42035141)
chr8 (211-344)||(9537848-9537982)
chr8 (211-371)||(12203854-12204016)
chr8 (211-371)||(12448282-12448444)
chr8 (214-345)||(2805287-2805419)
chr8 (214-339)||(7304545-7304671)
chr8 (220-348)||(43119241-43119370)
chr8 (239-347)||(40831302-40831410)
chr8 (214-348)||(13643036-13643170)
chr8 (214-348)||(13743461-13743595)
chr8 (220-370)||(16394094-16394247)
chr8 (255-342)||(32113938-32114025)
chr8 (250-345)||(17467630-17467725)
chr8 (222-328)||(42433579-42433685)
chr8 (267-345)||(9278239-9278317)
chr8 (263-333)||(34192814-34192884)
chr8 (267-348)||(10618042-10618123)
chr8 (237-348)||(22956730-22956840)
chr8 (250-370)||(29235235-29235357)
chr8 (295-346)||(12652656-12652707)
chr8 (227-321)||(22451835-22451929)
chr8 (215-300)||(24843307-24843393)
chr8 (237-309)||(39406905-39406977)
chr8 (275-328)||(34890647-34890700)
chr8 (250-318)||(30933386-30933453)
chr8 (265-328)||(42449009-42449072)
chr8 (263-328)||(33124570-33124635)
chr8 (305-347)||(36923782-36923824)
[»] chr2 (46 HSPs)
chr2 (215-374)||(561546-561708)
chr2 (214-370)||(20552931-20553090)
chr2 (214-370)||(31438646-31438805)
chr2 (220-370)||(44587902-44588055)
chr2 (214-346)||(4381821-4381954)
chr2 (211-373)||(2898069-2898233)
chr2 (220-372)||(31390010-31390165)
chr2 (214-348)||(30486234-30486369)
chr2 (211-348)||(32860126-32860263)
chr2 (214-371)||(22887749-22887909)
chr2 (209-372)||(34442554-34442719)
chr2 (239-348)||(38296201-38296310)
chr2 (231-370)||(8969451-8969591)
chr2 (220-372)||(38590907-38591062)
chr2 (214-348)||(6580213-6580348)
chr2 (214-348)||(22068347-22068481)
chr2 (214-340)||(26387091-26387218)
chr2 (214-348)||(27856423-27856558)
chr2 (231-367)||(3668157-3668295)
chr2 (239-370)||(43637165-43637297)
chr2 (220-345)||(22567629-22567755)
chr2 (226-373)||(29102322-29102471)
chr2 (250-371)||(26891727-26891850)
chr2 (220-371)||(32360902-32361056)
chr2 (214-342)||(1859192-1859321)
chr2 (250-367)||(5881221-5881343)
chr2 (209-341)||(27584769-27584902)
chr2 (220-348)||(35851784-35851913)
chr2 (214-348)||(28600991-28601125)
chr2 (230-370)||(5093582-5093724)
chr2 (237-346)||(11021273-11021382)
chr2 (220-344)||(13574062-13574187)
chr2 (211-333)||(4022503-4022625)
chr2 (211-333)||(25782857-25782977)
chr2 (212-328)||(39531868-39531983)
chr2 (250-328)||(15079023-15079100)
chr2 (215-333)||(25772149-25772269)
chr2 (250-371)||(34123089-34123211)
chr2 (250-321)||(15146683-15146753)
chr2 (239-328)||(10820528-10820615)
chr2 (275-328)||(40210252-40210306)
chr2 (266-372)||(44854419-44854528)
chr2 (264-328)||(20431482-20431547)
chr2 (281-328)||(16807318-16807366)
chr2 (281-328)||(16846599-16846647)
chr2 (281-328)||(30834456-30834504)
[»] chr1 (58 HSPs)
chr1 (250-376)||(17333346-17333473)
chr1 (214-347)||(9266755-9266889)
chr1 (214-372)||(15227737-15227898)
chr1 (214-370)||(5694321-5694480)
chr1 (214-373)||(51065775-51065937)
chr1 (220-371)||(19031848-19032002)
chr1 (214-371)||(45431278-45431437)
chr1 (214-373)||(51368812-51368974)
chr1 (214-372)||(42770017-42770178)
chr1 (214-371)||(29657770-29657930)
chr1 (214-346)||(47010019-47010152)
chr1 (211-346)||(3784737-3784873)
chr1 (214-374)||(18043158-18043321)
chr1 (250-371)||(29210412-29210535)
chr1 (212-347)||(36446350-36446485)
chr1 (233-348)||(12072109-12072224)
chr1 (220-353)||(38162869-38163003)
chr1 (215-343)||(3097688-3097817)
chr1 (239-371)||(48071482-48071615)
chr1 (211-342)||(8472938-8473070)
chr1 (215-353)||(6770356-6770495)
chr1 (214-373)||(12306915-12307076)
chr1 (214-348)||(24178490-24178625)
chr1 (214-372)||(29683193-29683355)
chr1 (220-342)||(30294414-30294537)
chr1 (213-345)||(43286749-43286882)
chr1 (237-345)||(35985672-35985780)
chr1 (230-370)||(38335170-38335312)
chr1 (214-372)||(14350305-14350465)
chr1 (257-375)||(30657603-30657723)
chr1 (238-368)||(38701985-38702117)
chr1 (214-371)||(13961211-13961370)
chr1 (211-339)||(50128196-50128325)
chr1 (263-344)||(15282591-15282672)
chr1 (220-340)||(47532704-47532824)
chr1 (220-348)||(41730329-41730461)
chr1 (220-367)||(48383144-48383294)
chr1 (230-342)||(45449287-45449400)
chr1 (263-379)||(35700728-35700843)
chr1 (233-348)||(23473511-23473626)
chr1 (250-326)||(37503260-37503335)
chr1 (233-328)||(37315315-37315409)
chr1 (233-348)||(52749626-52749741)
chr1 (265-346)||(26228219-26228300)
chr1 (250-339)||(39497340-39497429)
chr1 (298-369)||(19011108-19011180)
chr1 (233-350)||(30217782-30217901)
chr1 (270-348)||(39912363-39912441)
chr1 (239-321)||(52431632-52431713)
chr1 (257-370)||(28481844-28481954)
chr1 (275-370)||(39081803-39081898)
chr1 (275-345)||(3838866-3838936)
chr1 (250-344)||(14881043-14881124)
chr1 (298-347)||(10976014-10976063)
chr1 (241-347)||(49867454-49867560)
chr1 (237-277)||(19010738-19010778)
chr1 (275-346)||(33644423-33644495)
chr1 (263-341)||(43195179-43195260)
[»] chr3 (49 HSPs)
chr3 (211-370)||(20923992-20924154)
chr3 (218-371)||(272219-272375)
chr3 (212-348)||(42964274-42964411)
chr3 (214-371)||(49893330-49893490)
chr3 (214-370)||(48725271-48725430)
chr3 (220-374)||(46352630-46352787)
chr3 (214-370)||(43786871-43787030)
chr3 (220-346)||(858615-858742)
chr3 (239-346)||(41553993-41554100)
chr3 (214-373)||(52520678-52520840)
chr3 (230-347)||(2119456-2119572)
chr3 (237-370)||(2505350-2505484)
chr3 (220-370)||(4168183-4168336)
chr3 (215-340)||(13159929-13160055)
chr3 (214-372)||(40362607-40362768)
chr3 (214-366)||(7468417-7468569)
chr3 (214-370)||(39074419-39074577)
chr3 (220-371)||(41304004-41304156)
chr3 (237-350)||(22248908-22249021)
chr3 (220-351)||(10617317-10617449)
chr3 (214-374)||(18014668-18014831)
chr3 (214-345)||(28139336-28139468)
chr3 (250-348)||(53489888-53489986)
chr3 (220-372)||(11308244-11308398)
chr3 (239-346)||(43269792-43269899)
chr3 (214-347)||(42548120-42548254)
chr3 (215-345)||(50395591-50395721)
chr3 (220-353)||(52246601-52246736)
chr3 (215-320)||(33140937-33141043)
chr3 (220-344)||(2938073-2938198)
chr3 (230-348)||(49529309-49529431)
chr3 (226-348)||(24488390-24488513)
chr3 (237-340)||(29241669-29241772)
chr3 (220-333)||(41993653-41993766)
chr3 (215-344)||(50298973-50299103)
chr3 (237-315)||(6842676-6842754)
chr3 (257-370)||(38852216-38852332)
chr3 (211-347)||(50359210-50359347)
chr3 (215-336)||(31514827-31514948)
chr3 (287-353)||(52718186-52718252)
chr3 (250-324)||(2362880-2362953)
chr3 (294-348)||(2391631-2391685)
chr3 (294-348)||(2393392-2393446)
chr3 (209-297)||(52552549-52552637)
chr3 (220-328)||(21010041-21010146)
chr3 (215-328)||(25743854-25743967)
chr3 (312-370)||(2362801-2362861)
chr3 (281-348)||(27644025-27644093)
chr3 (277-328)||(40614474-40614526)
[»] chr6 (37 HSPs)
chr6 (220-378)||(12525711-12525872)
chr6 (215-368)||(2350654-2350810)
chr6 (214-370)||(392096-392255)
chr6 (220-372)||(23402136-23402291)
chr6 (211-373)||(3026033-3026196)
chr6 (237-373)||(3515763-3515901)
chr6 (230-348)||(18276658-18276777)
chr6 (213-372)||(1391204-1391365)
chr6 (250-372)||(20897946-20898070)
chr6 (250-351)||(34477614-34477715)
chr6 (220-372)||(7851192-7851347)
chr6 (237-370)||(21878398-21878533)
chr6 (237-348)||(26467175-26467286)
chr6 (214-373)||(32929535-32929697)
chr6 (214-346)||(12145144-12145277)
chr6 (213-340)||(34851875-34852003)
chr6 (214-348)||(4215719-4215854)
chr6 (220-350)||(29451148-29451279)
chr6 (214-348)||(32985220-32985355)
chr6 (220-344)||(2580980-2581105)
chr6 (255-372)||(34396596-34396715)
chr6 (214-345)||(35043917-35044048)
chr6 (220-342)||(25165446-25165569)
chr6 (237-371)||(27433491-27433627)
chr6 (226-347)||(11115136-11115256)
chr6 (238-371)||(31280320-31280455)
chr6 (209-348)||(13416981-13417124)
chr6 (250-348)||(23629640-23629738)
chr6 (214-341)||(28225252-28225379)
chr6 (220-370)||(29978233-29978385)
chr6 (220-330)||(961051-961162)
chr6 (226-351)||(1840286-1840412)
chr6 (273-348)||(13529479-13529554)
chr6 (215-340)||(9661018-9661144)
chr6 (237-346)||(5323426-5323535)
chr6 (281-328)||(10431780-10431827)
chr6 (263-320)||(11633970-11634028)
[»] chr5 (30 HSPs)
chr5 (214-370)||(34650860-34651018)
chr5 (220-373)||(13661805-13661961)
chr5 (220-373)||(35132519-35132674)
chr5 (250-372)||(19647722-19647846)
chr5 (238-370)||(21547446-21547579)
chr5 (237-370)||(11958018-11958153)
chr5 (209-370)||(35504262-35504426)
chr5 (230-332)||(12506336-12506439)
chr5 (235-374)||(13470147-13470288)
chr5 (220-372)||(8787337-8787492)
chr5 (250-370)||(10069969-10070090)
chr5 (233-372)||(10054400-10054540)
chr5 (233-370)||(6283562-6283701)
chr5 (220-371)||(40564437-40564589)
chr5 (241-334)||(11846110-11846203)
chr5 (237-344)||(9721658-9721765)
chr5 (220-345)||(20175254-20175380)
chr5 (254-344)||(31909659-31909749)
chr5 (260-372)||(4837256-4837369)
chr5 (230-345)||(39066978-39067095)
chr5 (228-348)||(40057331-40057452)
chr5 (215-327)||(10955997-10956109)
chr5 (264-355)||(2619635-2619726)
chr5 (226-372)||(39069379-39069525)
chr5 (257-345)||(19436908-19436995)
chr5 (239-314)||(4268620-4268694)
chr5 (275-345)||(6284822-6284892)
chr5 (275-348)||(6042136-6042210)
chr5 (264-321)||(20719327-20719384)
chr5 (266-374)||(21944939-21945051)
[»] chr7 (48 HSPs)
chr7 (237-372)||(24798454-24798590)
chr7 (237-371)||(47839492-47839627)
chr7 (220-371)||(5239284-5239438)
chr7 (211-374)||(29993511-29993677)
chr7 (214-375)||(4628561-4628725)
chr7 (239-348)||(30810679-30810788)
chr7 (220-353)||(34606280-34606414)
chr7 (220-346)||(8754618-8754745)
chr7 (250-371)||(27456177-27456299)
chr7 (233-372)||(34333282-34333422)
chr7 (237-369)||(28587911-28588044)
chr7 (213-370)||(43594062-43594222)
chr7 (214-370)||(24438477-24438636)
chr7 (226-341)||(47083086-47083202)
chr7 (230-372)||(12218479-12218624)
chr7 (237-351)||(42044344-42044458)
chr7 (226-345)||(525114-525234)
chr7 (214-345)||(7689227-7689359)
chr7 (220-344)||(11686355-11686482)
chr7 (239-372)||(18485959-18486094)
chr7 (214-348)||(47657004-47657137)
chr7 (230-359)||(23363210-23363341)
chr7 (250-341)||(34546378-34546469)
chr7 (214-348)||(1737004-1737138)
chr7 (214-343)||(45045799-45045929)
chr7 (214-333)||(18117182-18117302)
chr7 (214-342)||(13064903-13065033)
chr7 (230-346)||(5729372-5729489)
chr7 (233-367)||(28262034-28262165)
chr7 (250-322)||(37674168-37674240)
chr7 (250-348)||(37631606-37631704)
chr7 (239-328)||(18469993-18470081)
chr7 (237-342)||(46716668-46716773)
chr7 (214-333)||(33636491-33636611)
chr7 (262-352)||(3021911-3022000)
chr7 (250-344)||(36437405-36437498)
chr7 (257-346)||(4100595-4100684)
chr7 (239-327)||(22739868-22739957)
chr7 (214-340)||(23357737-23357861)
chr7 (257-342)||(29835775-29835860)
chr7 (302-353)||(22973617-22973668)
chr7 (218-328)||(18220702-18220812)
chr7 (238-297)||(47118041-47118100)
chr7 (275-345)||(4087650-4087720)
chr7 (281-328)||(41468726-41468774)
chr7 (280-351)||(18220625-18220696)
chr7 (226-341)||(18220479-18220593)
chr7 (317-353)||(47118095-47118131)
[»] scaffold0264 (1 HSPs)
scaffold0264 (230-372)||(22959-23104)
[»] scaffold0674 (1 HSPs)
scaffold0674 (250-351)||(7961-8062)
[»] scaffold0549 (1 HSPs)
scaffold0549 (250-351)||(7309-7410)
[»] scaffold0190 (1 HSPs)
scaffold0190 (214-370)||(14896-15055)
[»] scaffold0002 (1 HSPs)
scaffold0002 (215-340)||(146933-147059)
[»] scaffold0524 (1 HSPs)
scaffold0524 (214-346)||(851-984)
[»] scaffold0050 (2 HSPs)
scaffold0050 (214-350)||(69248-69384)
scaffold0050 (275-346)||(33770-33841)
[»] scaffold0188 (1 HSPs)
scaffold0188 (240-376)||(6164-6302)
[»] scaffold0021 (1 HSPs)
scaffold0021 (237-348)||(116228-116339)
[»] scaffold1266 (1 HSPs)
scaffold1266 (215-348)||(316-450)
[»] scaffold1152 (1 HSPs)
scaffold1152 (220-346)||(704-831)
[»] scaffold0014 (1 HSPs)
scaffold0014 (215-348)||(68318-68452)
[»] scaffold0206 (1 HSPs)
scaffold0206 (250-371)||(11034-11155)
[»] scaffold0003 (1 HSPs)
scaffold0003 (237-371)||(53736-53872)
[»] scaffold0113 (1 HSPs)
scaffold0113 (211-333)||(40958-41081)
[»] scaffold0325 (1 HSPs)
scaffold0325 (233-376)||(17518-17660)
[»] scaffold0263 (1 HSPs)
scaffold0263 (211-333)||(19609-19732)
[»] scaffold0045 (2 HSPs)
scaffold0045 (261-345)||(53421-53505)
scaffold0045 (250-353)||(50567-50670)
[»] scaffold0038 (1 HSPs)
scaffold0038 (214-341)||(25750-25877)
[»] scaffold0425 (1 HSPs)
scaffold0425 (237-311)||(10771-10845)
[»] scaffold0034 (1 HSPs)
scaffold0034 (237-344)||(95636-95742)
[»] scaffold0007 (1 HSPs)
scaffold0007 (250-307)||(233918-233975)
[»] scaffold0533 (1 HSPs)
scaffold0533 (275-321)||(5090-5136)
[»] scaffold0204 (1 HSPs)
scaffold0204 (275-328)||(14143-14196)


Alignment Details
Target: chr4 (Bit Score: 123; Significance: 6e-63; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 53003798 - 53003936
Alignment:
Q  10 attatactcactttcagacagatacaacaaggtgaaaaatgtactaaaattgaaagaggtcaaaagtgaaataaaatagattcttttaggtagactcaat 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  53003798 attatactcactttcagactgatacaacaaggtgaaaaatgtactaaaattgaaagagatcaaaagtgaaatcaaagagattcttttaggtagactcaat 53003897  T
Q  110 atttgctctaggcagtttgatagtcatttactcaatgta 148  Q
    |||||||||||||||||||||||||||||||||||||||    
T  53003898 atttgctctaggcagtttgatagtcatttactcaatgta 53003936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 220 - 382
Target Start/End: Original strand, 19503138 - 19503302
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  19503138 ttaagcataccataaaagggaattattacaataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactagtatataa 19503237  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttcccttttaattttca 382  Q
    |||||||||||||||| ||||||||| |||||||| |||||| ||||||||| || |||||||||    
T  19503238 tttcctttttcatatccttaaccagtacccgggagcaccggttagcatttccattataattttca 19503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 211 - 370
Target Start/End: Original strand, 32202505 - 32202666
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta 310  Q
    ||||| |||||||| |||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  32202505 ggacattgattaagcatatcataaaaggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 32202604  T
Q  311 ctatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    |||||||||||||||||| ||||| |||||| ||||||  |||| |||||| | ||||||||    
T  32202605 ctatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 237 - 372
Target Start/End: Complemental strand, 43944642 - 43944505
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |    
T  43944642 ggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccct 43944543  T
Q  337 taaccagtgcccgggag--accggtaagcatttccctt 372  Q
    |||||||||||| ||||  |||||| ||||||||||||    
T  43944542 taaccagtgccccggaggcaccggttagcatttccctt 43944505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 231 - 370
Target Start/End: Complemental strand, 28755761 - 28755621
Alignment:
Q  231 ataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttca 330  Q
    |||||||||| |||||   |||||||||||||||| | |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  28755761 ataaaaggaagtattatcataaaaggaaactgtttctaactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttca 28755662  T
Q  331 tatcattaaccagtgccc-gggagaccggtaagcatttccc 370  Q
    |||| ||||||||||||| |||| |||||| ||||||||||    
T  28755661 tatccttaaccagtgccctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 215 - 374
Target Start/End: Original strand, 789558 - 789720
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||    
T  789558 actggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta 789657  T
Q  314 tataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 374  Q
    ||||||||||||||||||| | |||||| ||||||  |||  |||||| ||||||||||||||    
T  789658 tataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctttt 789720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 15186378 - 15186240
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |    
T  15186378 ggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatggattaactactatataatttcctttttcataccct 15186279  T
Q  337 taaccagtgccc--gggagaccggtaagcatttcccttt 373  Q
    ||||||||||||  |||  |||||| |||||||||||||    
T  15186278 taaccagtgccccgggggcaccggttagcatttcccttt 15186240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 220 - 377
Target Start/End: Complemental strand, 29591342 - 29591182
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||||||||    
T  29591342 ttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaagtacacaatttcaatgcattaactactatataa 29591243  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttttaat 377  Q
    ||||||| |||||||  |||||||||||||  |||  ||| || |||||||||||||||||    
T  29591242 tttccttattcatattcttaaccagtgccccgggggcaccagttagcatttcccttttaat 29591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 213 - 344
Target Start/End: Complemental strand, 12356404 - 12356272
Alignment:
Q  213 acactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||| ||||| ||| |||||||| |||||||||   ||||||||||||||||||||||||||||| ||||||||| | | ||||||||||||||||||    
T  12356404 acactggttaagcataccataaaagagaattattatcataaaaggaaactgtttttgactttattataaattaattatataatttcaatgtattaactac 12356305  T
Q  312 tatataatttcctttttcatatcattaaccagt 344  Q
    ||||||||||||||||||||||| |||||||||    
T  12356304 tatataatttcctttttcatatccttaaccagt 12356272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 370
Target Start/End: Complemental strand, 54897470 - 54897308
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||  ||| ||||||||||| |||||||  |||||||||| |||||||||||||||||| ||||||||| ||| |||||||| |||||||    
T  54897470 ggacactggttaaacataccataaaaggaaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaact 54897371  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    ||||||||||||||||| ||||||| |||||||||||||  |||  |||||| ||||||||||    
T  54897370 actatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 33108720 - 33108860
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||  |||||||| |||||||| |||||||||||||||||||||    
T  33108720 aaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattatactatttcaatgcattaactattatataatttcctttttcata 33108819  T
Q  333 tcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    || ||||||||||||| ||||  |||||| | ||||||||||    
T  33108820 tc-ttaaccagtgccccggaggcaccggttaacatttccctt 33108860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 233 - 342
Target Start/End: Complemental strand, 39844046 - 39843937
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||| |||||||||    
T  39844046 aaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcatttttcata 39843947  T
Q  333 tcattaacca 342  Q
    || |||||||    
T  39843946 tccttaacca 39843937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 376
Target Start/End: Complemental strand, 7769091 - 7768932
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||||||  |||||||| ||||||||||  |||||||||||||||||| || ||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  7769091 ttaagtatgccataaaagagaattattaccataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataa 7768992  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttttaa 376  Q
    |||||||||||||| | |||||||||||||  |||  |||| | ||||||||||||||||    
T  7768991 tttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttcccttttaa 7768932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 214 - 372
Target Start/End: Complemental strand, 16536207 - 16536046
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  16536207 cactggttaagaataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 16536108  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||||||||||||||||||| | |||| | ||||||  |||  |||||| ||||||||||||    
T  16536107 atataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttccctt 16536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 30387164 - 30387270
Alignment:
Q  217 tgattaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactata 315  Q
    |||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  30387164 tgattaagcatatcataaaaaggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactata 30387263  T
Q  316 taatttc 322  Q
    |||||||    
T  30387264 taatttc 30387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 54655900 - 54656038
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||||||||| || |||||||||   |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  |||||||    
T  54655900 ggacactggttaagcatatcataagagagaattattatcctaaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaact 54655999  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  54656000 actatataatttccttttttatatccttaaccagtgccc 54656038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 230 - 371
Target Start/End: Complemental strand, 4089285 - 4089141
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  4089285 cataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataattttcttttt 4089186  T
Q  329 catatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    |||| | |||| ||||||||  |||  |||||| |||||||||||    
T  4089185 catacccttaatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 215 - 370
Target Start/End: Original strand, 24679671 - 24679827
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||| ||| |||||||| ||||||||||  |||| ||||| ||||||| |||||||||| ||||||||||||| |||||||  |||||||||||    
T  24679671 actgattaagcataccataaaagagaattattaccataaa-ggaaattgtttttaactttattataaattaattacacaatttcaatacattaactacta 24679769  T
Q  314 tataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccc 370  Q
    ||||||||| ||||||||||| |||||||||| |||| || |||||| ||||||||||    
T  24679770 tataatttcttttttcatatccttaaccagtgccccgagacaccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 212 - 372
Target Start/End: Complemental strand, 46149100 - 46148939
Alignment:
Q  212 gacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta 310  Q
    ||||||| ||||  ||| |||||||| ||||||||||  ||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||    
T  46149100 gacactggttaaacataccataaaagagaattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgtattaatta 46149001  T
Q  311 ctatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccctt 372  Q
     ||||||||||||||||||||||  ||| | | ||||||||  |||||| ||||||||||||    
T  46149000 ttatataatttcctttttcatattcttatcaaatgcccggggcaccggttagcatttccctt 46148939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 32217160 - 32217069
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  32217160 aaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccc 32217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 237 - 374
Target Start/End: Original strand, 47231923 - 47232062
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    ||||||||||   ||||||||||||||||||||||||||||| |||||||||||   |||||||| |||||||| ||||||||||||||||||| ||| |    
T  47231923 ggaattattatcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataatttcctttttcacatcct 47232022  T
Q  337 taaccagtgc-ccgggag-accggtaagcatttccctttt 374  Q
    |||||||||| ||||| | |||||| ||||||||||||||    
T  47232023 taaccagtgctccgggggcaccggttagcatttccctttt 47232062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 50619245 - 50619110
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||||||||||||||| |||||||||| |||||| |||||| |||||||| ||||||||||    
T  50619245 cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaagtacacaatttcaatgcattaactact 50619146  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||| |||||||||||  |||| ||||||||    
T  50619145 atataattttctttttcatattcttaatcagtgccc 50619110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 54945806 - 54945940
Alignment:
Q  214 cactgattaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||||||| ||||||| |||||||| ||  ||||| |||| |||||||||||||||||| ||||||||||||| |||||||  ||||||| ||    
T  54945806 cactggttaagtataccataaaaaggaattat-accataaaacgaaattgtttttgactttattataaattaattacacaatttcaatacattaactgct 54945904  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||||||||| |||||||||||||    
T  54945905 atataatttcctttttcatatccttaaccagtgccc 54945940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 220 - 370
Target Start/End: Original strand, 3783534 - 3783687
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||||||||    
T  3783534 ttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattaaacaattttaatgcattaactactatataa 3783633  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 370  Q
    |||| ||||||||||  |||||| |||||| ||||  |||||| ||||||||||    
T  3783634 tttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 5091633 - 5091798
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||||||||| ||||| ||| ||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||| ||| ||||||    
T  5091633 ccggacactggttaagcata-cataaaagggaattattactataaaaggaaactgtttatgactttattataaattaattacacaattttaatatattaa 5091731  T
Q  308 ctactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccctt 372  Q
     || ||||||||||  ||||||||||  |||||||||| |||||||| |||||| || |||||||||    
T  5091732 ttattatataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttccctt 5091798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 42898810 - 42898908
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  42898810 taaaaagaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccc 42898908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 4268873 - 4269009
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||| ||||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||||||| |||||||||||||| | |    
T  4268873 ggaattattaccataaaaagaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcataccct 4268972  T
Q  337 taaccagtgccc--gggagaccggtaagcatttccct 371  Q
    ||||||||||||  |||  |||||| |||||||||||    
T  4268973 taaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 18067930 - 18068066
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||| |||||||| |||| || ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |    
T  18067930 ggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcataccct 18068029  T
Q  337 taaccagtgccc--gggagaccggtaagcatttccct 371  Q
    ||||||||||||  |||  |||||| |||||||||||    
T  18068030 taaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 36395258 - 36395129
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| ||||||||   |||||| |||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  36395258 cactggttaagcataccataaaagggaattattatcataaaagaaaactgcttttgactttattataaattaattacacaatttcaatgcattaactact 36395159  T
Q  313 atataatttcctttttcatatcattaacca 342  Q
    |||||||||||||||||||||  |||||||    
T  36395158 atataatttcctttttcatatttttaacca 36395129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 238 - 372
Target Start/End: Complemental strand, 37988069 - 37987934
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    ||||||||||  |||||||||||||||||| || ||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||| | ||    
T  37988069 gaattattacaataaaaggaaactgtttttaacattattataaattaattacacaatttcaatacattaactactatataatttcctttttcataccctt 37987970  T
Q  338 aaccagtgcccgggag-accggtaagcatttccctt 372  Q
    ||||| | ||| |||| |||||| | ||||||||||    
T  37987969 aaccattaccctggagcaccggttaacatttccctt 37987934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 43202405 - 43202571
Alignment:
Q  209 ccggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||| ||||| |||||  || |||||||| ||||||||||  |||||| |||||||||||||| ||||||| ||||||||||||| ||| |||| |||||    
T  43202405 ccgggcactggttaagcttaccataaaagagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaattttaatgcattaa 43202504  T
Q  308 ctactatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
     |||||||||||||||||||||||| | ||||| |||||||  |||  |||||| ||||||||||||    
T  43202505 ttactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccctt 43202571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 237 - 373
Target Start/End: Original strand, 52533836 - 52533974
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||| ||||||||||| |||||||||  || ||||| || |||||||||||||||||||||||||||||||  |    
T  52533836 ggaattattaccataaaaggaaactgttttcgactttattatcaattaattattcaatttcagtgcattaactactatataatttcctttttcatattct 52533935  T
Q  337 taaccagtgcccgggag--accggtaagcatttcccttt 373  Q
    ||||||||| || ||||  |||||| | |||||||||||    
T  52533936 taaccagtgtcctggaggcaccggttaacatttcccttt 52533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 55882835 - 55882683
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||||||| |||||||| ||||| ||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||    
T  55882835 ttaagtataccataaaagtgaatt-ttaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattactatataa 55882737  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 371  Q
    |||  ||||||||||| ||||| ||||||| ||||  |||||| |||||||||||    
T  55882736 ttt-ttttttcatatccttaacgagtgccccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 220 - 341
Target Start/End: Complemental strand, 4220347 - 4220226
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| ||||||||| | ||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  4220347 ttaagcataccataaaagggaattattacat-aaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataa 4220249  T
Q  319 tttcctttttcatatcattaacc 341  Q
    |||||||||||||||| ||||||    
T  4220248 tttcctttttcatatccttaacc 4220226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 6164251 - 6164118
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||| |||||||| ||||||||||  ||||||||||||||||||  ||||||||| ||||||||||||| |||||||| |||||||||||    
T  6164251 actggttaagcataccataaaagagaattattaccataaaaggaaactgttttttgctttattataaattaattacacaatttcaatgcattaactacta 6164152  T
Q  314 tataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||| | |||| ||||| |||||||||||||    
T  6164151 tataattttc-ttttgatatccttaaccagtgccc 6164118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 370
Target Start/End: Complemental strand, 54054670 - 54054548
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg--cc 347  Q
    |||||||||| |||||||||||||||||| ||||||||||||  |||||||| |||||||| ||||||||||| ||||||||||| |||||| |||  ||    
T  54054670 taaaaggaaattgtttttgactttattatcaattaattacactatttcaatgcattaactattatataatttcttttttcatatccttaaccggtgcccc 54054571  T
Q  348 cgggagaccggtaagcatttccc 370  Q
    ||||  |||||| ||||||||||    
T  54054570 cggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 231 - 346
Target Start/End: Complemental strand, 49915301 - 49915185
Alignment:
Q  231 ataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttc 329  Q
    |||||||||| |||||| | |||||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| |||||||||| || |||||||    
T  49915301 ataaaaggaaattattattataaaaggaaactgttttttactttattataaattaattacacaatttcaatacattaattactatataaatttctttttc 49915202  T
Q  330 atatcattaaccagtgc 346  Q
    ||||| |||| ||||||    
T  49915201 atatccttaatcagtgc 49915185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 233 - 350
Target Start/End: Original strand, 31680510 - 31680627
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||| ||||||||||  |||||||||| |||||||||||||||||| ||||||||| ||| |||||||| |||||||| ||| ||| || ||||||||||    
T  31680510 aaaatgaattattaccataaaaggaaattgtttttgactttattataaattaattatacaatttcaatgcattaactattatgtaactttctttttcata 31680609  T
Q  333 tcattaaccagtgcccgg 350  Q
     | |||||||||| ||||    
T  31680610 cccttaaccagtgtccgg 31680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 42815225 - 42815137
Alignment:
Q  256 gaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 344  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||  |||||||||||||||||||||| |||||||||    
T  42815225 gaaactgtttttgactttattataaattaattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccagt 42815137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 253 - 348
Target Start/End: Original strand, 30154230 - 30154324
Alignment:
Q  253 aaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||| ||||||||| |||||||| ||||||||||| | |||||||  |||||||||||||||||||||||||||||||| ||||| |||||||    
T  30154230 aaggaaattgtttttgattttattataaattaattacataatttcaatacattaactactatataatttcctttttcatatc-ttaactagtgccc 30154324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 46688269 - 46688371
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc-----tttttcatatcattaaccagt 344  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||| |     ||||||||||| |||||||||    
T  46688269 taaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaaccagt 46688368  T
Q  345 gcc 347  Q
    |||    
T  46688369 gcc 46688371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 214 - 370
Target Start/End: Original strand, 53655905 - 53656062
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||||||||| ||| ||||||| ||| |||||||  |||||  ||| | ||||| |||||||||| ||||||||||||| |||||||  |||||||| |    
T  53655905 cactgattaagcataccataaaatgaaattattaccataaaataaaattatttttaactttattataaattaattacacaatttcaatacattaactatt 53656004  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccc 370  Q
    |||||||||| ||||||||||| ||||| |||| ||| || |||  | ||||||||||    
T  53656005 atataatttcttttttcatatccttaacaagtgtccgagacaccaattagcatttccc 53656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 53003980 - 53004062
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacaca 292  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||| | ||||||||||||||||  ||||||||||||    
T  53003980 ggacactgattaagcatatcataaaagagaattattattttaaaaggaaattatttttgactttattatacattaattacaca 53004062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 39877287 - 39877363
Alignment:
Q  225 tatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaat 300  Q
    |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  39877287 tataccataaaagagaattattactataaaatgaaactgtttttgactttattataaattaattacacaatttcaat 39877363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 341
Target Start/End: Complemental strand, 52697215 - 52697083
Alignment:
Q  209 ccggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||||||||  ||||  |||||||||||| ||||||||||  |||| | ||| | |||||||||||||||| ||||| ||| | | ||| ||||||||||    
T  52697215 ccggacactcgttaaacatatcataaaagagaattattacaataaaggaaaattatttttgactttattataaatta-ttatataattttaatgtattaa 52697117  T
Q  308 ctactatataatttcctttttcatatcattaacc 341  Q
    ||||||||||||||  ||||||||||| ||||||    
T  52697116 ctactatataattttgtttttcatatccttaacc 52697083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 345
Target Start/End: Complemental strand, 50603342 - 50603254
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||| ||||| || |||| ||||||||||| || | | ||||||||||    
T  50603342 aaactgtttttgacattattataaattaattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 347
Target Start/End: Original strand, 1432653 - 1432703
Alignment:
Q  297 caatgtattaactactatataatttcctttttcatatcattaaccagtgcc 347  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1432653 caatgtattaactattatataatttcctttttcatatccttaaccagtgcc 1432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 41265591 - 41265510
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 321  Q
    |||||||||  |||||| ||||||||||||| ||| |||| ||||||||||||| ||||| || |||||||||||||||||||    
T  41265591 aattattacaataaaagaaaactgtttttgatttt-ttataaattaattacacaatttcactgcattaactactatataattt 41265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 50167681 - 50167615
Alignment:
Q  280 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||| |||||||| |||||||||  |||||||| |||||||||||| |||||||||||||    
T  50167681 aattaattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgccc 50167615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 53268852 - 53268764
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| | |||||| ||| ||||||||||||| |||| ||||||||||||| ||| |||| |||||||| ||||||||||| |||||    
T  53268852 aattattattataaaagaaaattgtttttgacttt-ttataaattaattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 297
Target Start/End: Complemental strand, 8133840 - 8133782
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttc 297  Q
    |||||||||  |||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  8133840 aattattaccataaaagaaaactatttttgactttattataaattaattacacattttc 8133782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 31517274 - 31517217
Alignment:
Q  263 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatt 320  Q
    |||||||||||||||| ||||||||||||  |||||||| |||||||| |||||||||    
T  31517274 tttttgactttattatcaattaattacactatttcaatgcattaactattatataatt 31517217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 214 - 312
Target Start/End: Complemental strand, 16821011 - 16820912
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||||| |||||||  |||||||||||||  | |||||||||||| | ||||||||| | |||||||| ||||| ||||    
T  16821011 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgcgtatgactttattataagttaattacagaatttcaatgcattaattact 16820912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 3999451 - 3999546
Alignment:
Q  251 aaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttca-tatcattaaccagtgc 346  Q
    ||||||||||| ||||||||||| ||||| ||| |||||||| ||||||||| |  ||||||||| ||||||||||||| | ||||||||||| ||||    
T  3999451 aaaaggaaact-tttttgacttt-ttatggatttattacacaattttcaatgcaacaactactatgtaatttccttttttagtatcattaaccggtgc 3999546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 8133787 - 8133731
Alignment:
Q  318 atttcctttttcatatcattaaccagtgcccggg-agaccggtaagcatttcccttt 373  Q
    |||| |||||||||||| |||||||||| ||||| |||||||| |||||||||||||    
T  8133787 attttctttttcatatccttaaccagtgtccgggaagaccggttagcatttcccttt 8133731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 351
Target Start/End: Original strand, 39877554 - 39877592
Alignment:
Q  313 atataatttcctttttcatatcattaaccagtgcccggg 351  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  39877554 atataattttctttttcatatcgttaaccagtgcccggg 39877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 8e-47; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 27988521 - 27988687
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||| ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  27988521 ccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaa 27988620  T
Q  308 ctactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    ||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  27988621 ctattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 28045823 - 28045989
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||| ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  28045823 ccgggcactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaa 28045922  T
Q  308 ctactatataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    ||| ||||||||||||||||||||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  28045923 ctattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 215 - 372
Target Start/End: Complemental strand, 4648352 - 4648193
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||||||||||||| |||||||||  | ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  4648352 actggttaagcatatcataaaagggaattattaccatcaaaagaaactgtttttgacattattataaattaattacacaatttcaatgtattaactacta 4648253  T
Q  314 tataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccctt 372  Q
    ||||||||||||||||||||| |||| ||||| ||||||| |||||| ||||||||||||    
T  4648252 tataatttcctttttcatatccttaatcagtgccccgggacaccggttagcatttccctt 4648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 214 - 370
Target Start/End: Original strand, 30675600 - 30675758
Alignment:
Q  214 cactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    ||||| ||||| ||| ||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||    
T  30675600 cactggttaagcataccataaaaggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactacta 30675699  T
Q  314 tataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    ||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  30675700 tataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 220 - 373
Target Start/End: Complemental strand, 168619 - 168463
Alignment:
Q  220 ttaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||| |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  168619 ttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataa 168520  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttt 373  Q
    |||||||||||||| | ||||||||||||| ||||  |||||| |||||||||||||    
T  168519 tttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttcccttt 168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 238 - 369
Target Start/End: Original strand, 16888596 - 16888728
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||    
T  16888596 gaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 16888695  T
Q  338 aaccagtgcccgggag-accggtaagcatttcc 369  Q
    |||| ||||||||| | |||||| |||||||||    
T  16888696 aacctgtgcccgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 34228841 - 34228682
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  34228841 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 34228742  T
Q  313 atataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 370  Q
    |||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  34228741 atataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 220 - 346
Target Start/End: Original strand, 33357162 - 33357289
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  33357162 ttaagcataccataaaagagaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 33357261  T
Q  319 tttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||| |||||||||||    
T  33357262 tttcctttttcatatccttaaccagtgc 33357289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 220 - 372
Target Start/End: Original strand, 4537777 - 4537932
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||    
T  4537777 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacataatttcaatgcattaactactatataa 4537876  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    |||||| ||| ||||| ||||||||||||| ||||  |||||| ||||||||||||    
T  4537877 tttcctattttatatccttaaccagtgccccggaggcaccggttagcatttccctt 4537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 9063079 - 9063239
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| |||||| |||||| |||||||||  |||||| ||| |||||||||||||||||| |||||||| |||  |||||||| ||||||||||    
T  9063079 cactggttaagcatatcacaaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattgcacgatttcaatgcattaactact 9063178  T
Q  313 atataatttcctttttcatatcattaaccagtgc-ccgggagaccggtaagcatttccctt 372  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||    
T  9063179 atataatttcctttttcatatccttaaccagtgctccgggacaccggttagcatttccctt 9063239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 230 - 372
Target Start/End: Complemental strand, 16785229 - 16785085
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||| |||||||||||| |||||    
T  16785229 cataaaagagaattattattataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactgctatataatttctttttt 16785130  T
Q  329 catatcattaaccagtgcccgggag-accggtaagcatttccctt 372  Q
    |||||| ||||||||||||| |||| |||||| ||||||||||||    
T  16785129 catatccttaaccagtgccctggagcaccggttagcatttccctt 16785085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 211 - 369
Target Start/End: Complemental strand, 21596008 - 21595848
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| ||||||||| ||||| |||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  21596008 ggacactggttaagcataccataaaagggaattaataccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaact 21595909  T
Q  310 actatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttcc 369  Q
     |||||||||||||||||||||| | |||||||||||||||| | |||||| |||||||||    
T  21595908 cctatataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 233 - 340
Target Start/End: Original strand, 16890527 - 16890634
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  16890527 aaaaggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcata 16890626  T
Q  333 tcattaac 340  Q
    || |||||    
T  16890627 tccttaac 16890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 368
Target Start/End: Original strand, 20831580 - 20831737
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||||||||| ||| |||||||| ||||||||||  ||||||||||||| ||||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  20831580 cactgattaagcataccataaaagagaattattaccataaaaggaaactgcttttgactttattataaattaattatactatttcaatgcattaactact 20831679  T
Q  313 atataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttc 368  Q
    |||||||||||||||||||||| |||||||||| |||||| | |||||| ||||||||    
T  20831680 atataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 214 - 371
Target Start/End: Original strand, 3930260 - 3930419
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||||||||||||||| ||||||    |||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||    
T  3930260 cactggttaagcatatcataaaaggaaattattatcaaaaaaggaaactgtttttgactttattatcaattaattacacaacttcaatgcattaactact 3930359  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 371  Q
    |||||||||||| |||||||| |||||| |||||||||| | |||| | |||||||||||    
T  3930360 atataatttcctctttcatattattaactagtgcccgggggcaccgattagcatttccct 3930419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 238 - 345
Target Start/End: Complemental strand, 36730578 - 36730471
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    ||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||    
T  36730578 gaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctt 36730479  T
Q  338 aaccagtg 345  Q
    ||| ||||    
T  36730478 aactagtg 36730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 9253926 - 9254063
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    ||||| || ||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||    
T  9253926 ggacattggttaagcataccataaaagagaattattactataaaaggaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaact 9254024  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||| |||||| ||||||||||| |||||||||||||    
T  9254025 actataaaatttcatttttcatatccttaaccagtgccc 9254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 227 - 370
Target Start/End: Complemental strand, 10870498 - 10870357
Alignment:
Q  227 tatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctt 325  Q
    |||||||||||| |||||||||  |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||    
T  10870498 tatcataaaagggaattattaccataaaaggaaactgtttttgattttattataaattaattacacaatttcaatgtattaactattatataattttctt 10870399  T
Q  326 tttcatatcattaaccagtgcccgggagaccggtaagcatttccc 370  Q
    ||| |||||||||||||   || |||| |||||| ||||||||||    
T  10870398 ttttatatcattaacca---ccggggataccggttagcatttccc 10870357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 11112792 - 11112666
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| |||||||||   |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  11112792 ttaagcataccataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 11112693  T
Q  319 tttcctttttcatatcattaaccagtg 345  Q
    |||||||||||||||| ||||||||||    
T  11112692 tttcctttttcatatccttaaccagtg 11112666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 348
Target Start/End: Original strand, 29444164 - 29444302
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||  ||| ||||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||||||| ||||||||  ||||||    
T  29444164 ggacactggttaaacataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcgttaact 29444263  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  29444264 actatataatttcctttttcatatccttaatcagtgccc 29444302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 237 - 370
Target Start/End: Complemental strand, 37373340 - 37373206
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||| |||||||||| ||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |    
T  37373340 ggaattattaccataaaagaaaactgttttcgactttattatcaattaattacacaatttcaatgcattaactattatataatttcctttttcatatcct 37373241  T
Q  337 taaccagtgcccgggag-accggtaagcatttccc 370  Q
    ||||||||| ||||| | |||||| ||||||||||    
T  37373240 taaccagtgtccgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 209 - 348
Target Start/End: Complemental strand, 28626932 - 28626792
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||||||||||||||| ||| ||||||||| ||||||||   ||||| ||||||||||||||||||||||| ||||||| ||||| |||||||  |||||    
T  28626932 ccggacactgattaagcataccataaaagggaattattatcataaaaagaaactgtttttgactttattataaattaatcacacaatttcaatacattaa 28626833  T
Q  308 ctactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  28626832 ctactatataatttcctttttcacatccttaaccggtgccc 28626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 220 - 346
Target Start/End: Original strand, 42035014 - 42035141
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  42035014 ttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaactactatataa 42035113  T
Q  319 tttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||| |||||||||||    
T  42035114 tttcctttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 9537848 - 9537982
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| ||||||||||| |||||||| ||||| ||||||  |||||| |||||||| ||||||||||||| ||| |||| |||||||    
T  9537848 ggacactggttaagcataccataaaaggaaattattactataaaaagaaactccttttgaatttattataaattaattacacaattttaatgcattaact 9537947  T
Q  310 actatataatttcctttttcatatcattaaccagt 344  Q
    ||||||||||||||||||||||||| |||||||||    
T  9537948 actatataatttcctttttcatatccttaaccagt 9537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 211 - 371
Target Start/End: Complemental strand, 12204016 - 12203854
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| || || ||| ||||||||| ||||||||   ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  12204016 ggacactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaact 12203917  T
Q  310 actatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 371  Q
    ||||||||||||| ||||||||| | |||||| || |||||| | |||||| |||||||||||    
T  12203916 actatataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 211 - 371
Target Start/End: Complemental strand, 12448444 - 12448282
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| || || ||| ||||||||| ||||||||   ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||    
T  12448444 ggacactggttcagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaact 12448345  T
Q  310 actatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 371  Q
    ||||||||||||| ||||||||| | |||||| || |||||| | |||||| |||||||||||    
T  12448344 actatataatttcttttttcatacccttaaccggtacccgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 345
Target Start/End: Original strand, 2805287 - 2805419
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||| |||||||||||||||   ||||||||||| |||||||| |||||||| |    
T  2805287 cactggttaagcataccataaaagggaattattaccataaaaggaaactgcttttgactttattataggttaattacacaatttcaatgcattaactatt 2805386  T
Q  313 atataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||||||||||||||| ||||||||||    
T  2805387 atataatttcctttttcatatccttaaccagtg 2805419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 214 - 339
Target Start/End: Original strand, 7304545 - 7304671
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||    ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  7304545 cactggttaagcataccataaaagagaattattttcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 7304644  T
Q  313 atataatttcctttttcatatcattaa 339  Q
    ||||||||| |||||||||||| ||||    
T  7304645 atataattttctttttcatatccttaa 7304671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 43119370 - 43119241
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||| ||  |||||| |||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||    
T  43119370 ttaagcataccataaaagagaattatcaccataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactactatataa 43119271  T
Q  319 tttcctttttcatatcattaaccagtgccc 348  Q
    ||| |||||||||||| |||| ||||||||    
T  43119270 ttttctttttcatatctttaatcagtgccc 43119241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 347
Target Start/End: Complemental strand, 40831410 - 40831302
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  |||||| ||| |||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||| |||||||||||| |||    
T  40831410 aattattaccataaaagaaaattgtttttgactttattataaattaattatacaatttcaatgcattaactactatataattttctttttcatatcttta 40831311  T
Q  339 accagtgcc 347  Q
    |||||||||    
T  40831310 accagtgcc 40831302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 13643170 - 13643036
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||||||  | |||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  13643170 cactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaactact 13643072  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||| |||| |||||||||||||    
T  13643071 atataatttcctttttcgtatccttaaccagtgccc 13643036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 13743595 - 13743461
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||||||  | |||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  13743595 cactggttaagcataccataaaagagaattattaccataaaaggaattt-tttttgactttattataaattaattacataatttcaatgcattaactact 13743497  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||| |||| |||||||||||||    
T  13743496 atataatttcctttttcgtatccttaaccagtgccc 13743461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 220 - 370
Target Start/End: Original strand, 16394094 - 16394247
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||   |||||||| |||||||| |||||||    
T  16394094 ttaagcataccataaaagagaattattagcataaaaggaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataa 16394193  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    ||| |||||||| ||| |||||||||||||  |||  |||||| ||||||||||    
T  16394194 ttttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 32114025 - 32113938
Alignment:
Q  255 ggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 342  Q
    ||||||||||||| |||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  32114025 ggaaactgttttttactttattataaattaattaaacaatttcaatgcattaactactatataatttcctttttcatatccttaacca 32113938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 345
Target Start/End: Complemental strand, 17467725 - 17467630
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||| ||||||||| |||||||| ||||||||||||| |||||||| ||||| ||||  |||||||||||||||||||||||||| ||||    
T  17467725 taaaaggaaattgtttttgattttattatcaattaattacacaatttcaatgcattaattactgcataatttcctttttcatatcattaactagtg 17467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 42433579 - 42433685
Alignment:
Q  222 aagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatt 320  Q
    ||||||| || |||||||| |||||||  |||||| ||||||||||||||||| |||| ||||||||||||| |||||||| |||||||| |||||||||    
T  42433579 aagtataccaaaaaaggaaattattaccataaaagaaaactgtttttgacttt-ttataaattaattacacaatttcaatgcattaactattatataatt 42433677  T
Q  321 tccttttt 328  Q
    ||||||||    
T  42433678 tccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 9278317 - 9278239
Alignment:
Q  267 tgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||| ||||    
T  9278317 tgactttattataaattaattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtg 9278239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 34192884 - 34192814
Alignment:
Q  263 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatat 333  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||    
T  34192884 tttttgactttattataaattaattacacaatttcaatgcattaactagtatataatttcctttttcatat 34192814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 348
Target Start/End: Complemental strand, 10618123 - 10618042
Alignment:
Q  267 tgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||| ||||||||||||| ||| | || ||||||||||||||||||| |||||||||||| |||||| ||||||    
T  10618123 tgactttattatcaattaattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccc 10618042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 22956840 - 22956730
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||| ||||  ||||||||||||||||||||| ||||||| ||||||||||| | ||| |||||||||||||| |||| | ||||||||| |||   |    
T  22956840 ggaatttttaccataaaaggaaactgtttttgacattattataaattaattacataattttaatgtattaactaccatatga-ttccttttttatactct 22956742  T
Q  337 taaccagtgccc 348  Q
    ||||||||||||    
T  22956741 taaccagtgccc 22956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 250 - 370
Target Start/End: Complemental strand, 29235357 - 29235235
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc-cc 348  Q
    ||||||||| || ||||||| |||||||| |||||||||||||  || |||| |||||||||||||||||||| ||||| ||||| |||| || ||| ||    
T  29235357 taaaaggaacctatttttgattttattataaattaattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctcc 29235258  T
Q  349 ggg-agaccggtaagcatttccc 370  Q
    ||| | |||||| ||||||||||    
T  29235257 gggaacaccggttagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 12652707 - 12652656
Alignment:
Q  295 ttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 346  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 12652656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 22451929 - 22451835
Alignment:
Q  227 tatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 321  Q
    |||||| ||||||| |||||||  ||||||||| || ||||||||||| |||| ||||||||||||| |||||||| ||||||| |||||||||||    
T  22451929 tatcatgaaaggaaattattaccataaaaggaagctatttttgacttt-ttataaattaattacacaatttcaatgcattaactgctatataattt 22451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 24843307 - 24843393
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaat 300  Q
    |||||||||| ||| |||||||| ||||||||    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  24843307 actgattaagcataccataaaagagaattattgtcataaaaggaaactgattttgactttattataaattaattacacaatttcaat 24843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 39406977 - 39406905
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    ||||||||||   ||||||||||||||||||||||||||||| ||||||||||||| ||| || | |||||||    
T  39406977 ggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaattttaacgcattaact 39406905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 34890647 - 34890700
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||| |||||||| |||||||||| ||| ||||||||||||| ||||||    
T  34890647 ttatgaattgattacacaatttcaatgtaataaatactatataattttcttttt 34890700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 30933386 - 30933453
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    |||||| ||| ||||||| ||||| |||| ||||||||||||| |||||||| ||||| ||||||||||    
T  30933386 taaaagaaaaatgtttttaacttt-ttataaattaattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 328
Target Start/End: Complemental strand, 42449072 - 42449009
Alignment:
Q  265 tttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||| ||||| ||||| |||||| ||||||||||| ||||||||||||||||||| ||||    
T  42449072 tttgacttt-ttatggattaactacacaattttcaatgtaataactactatataatttccatttt 42449009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 33124570 - 33124635
Alignment:
Q  263 tttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||||| |||| |||| |||||||| ||||||||| | |||||||||||||| |||||||||    
T  33124570 tttttgacttt-ttataaattgattacacaattttcaatgcaataactactatataacttccttttt 33124635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 36923782 - 36923824
Alignment:
Q  305 taactactatataatttcctttttcatatcattaaccagtgcc 347  Q
    |||||| ||||||||||||||||||||||| |||| |||||||    
T  36923782 taactattatataatttcctttttcatatccttaatcagtgcc 36923824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 8e-47; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 215 - 374
Target Start/End: Original strand, 561546 - 561708
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||| ||| |||||||| ||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  561546 actgattaagcataccataaaagagaattattattataaaaggaaactgattttgactttattataaattaattacacaatttcaatgcattaactacta 561645  T
Q  314 tataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 374  Q
    ||||||||||||||||||||| |||||||||||||  |||  |||||| ||||||||||||||    
T  561646 tataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 561708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 20553090 - 20552931
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  20553090 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 20552991  T
Q  313 atataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 370  Q
    |||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  20552990 atataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 31438805 - 31438646
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| ||||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  31438805 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 31438706  T
Q  313 atataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccc 370  Q
     ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||||    
T  31438705 gtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 220 - 370
Target Start/End: Complemental strand, 44588055 - 44587902
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  44588055 ttaagcataccataaaagggaattattaccataaaaggaaactgttttttactttattataaattaattacacaatttcaatgtattaactactatataa 44587956  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    |||||||||| ||||| |||||| ||||||  |||  |||||| ||||||||||    
T  44587955 tttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 4381954 - 4381821
Alignment:
Q  214 cactgattaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||| |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  4381954 cactggttaagcataccataaaatggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 4381855  T
Q  313 atataatttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||||||| | |||||||||||    
T  4381854 atataatttcctttttcatacccttaaccagtgc 4381821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 211 - 373
Target Start/End: Complemental strand, 2898233 - 2898069
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||||||||  ||| |||||||| |||||||||   || ||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  2898233 ggacactgattaaacataccataaaagagaattattatgatagaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaact 2898134  T
Q  310 actatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttcccttt 373  Q
    |||||||||||| |||||||||||| ||||||||||  |||||| |||||| | |||||||||||    
T  2898133 actatataattttctttttcatatccttaaccagtgttccgggacaccggttaacatttcccttt 2898069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 31390165 - 31390010
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||| | |||||||  ||||||||||||||||    
T  31390165 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacataatttcaatacattaactactatataa 31390066  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    |||||||||||||||| ||||| ||||||| ||||  ||| || ||||||||||||    
T  31390065 tttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctt 31390010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 30486369 - 30486234
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||||||||||||||||||||||||||   ||||||||||| |||||||  ||||||||||    
T  30486369 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagtttaattacacaatttcaatacattaactact 30486270  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||||||||| |||||||||||||    
T  30486269 atataatttcctttttcatatccttaaccagtgccc 30486234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 348
Target Start/End: Complemental strand, 32860263 - 32860126
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| |||||||| |||||||||| | |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |    
T  32860263 ggacactggttaagcataccataaaagagaattattacat-aaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaaat 32860165  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||| ||||| |||||| ||||||    
T  32860164 actatataatttccttttttatatccttaacccgtgccc 32860126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 22887909 - 22887749
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||||||||||||||| |||||||||| ||||||||||| | |||||||| ||||||||||    
T  22887909 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactact 22887810  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 371  Q
    |||||||||| ||||||||||| ||||||| ||||| ||||  | |||| |||||||||||    
T  22887809 atataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 372
Target Start/End: Original strand, 34442554 - 34442719
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||| ||||| ||||| ||| ||||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  34442554 ccgggcactggttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaa 34442653  T
Q  308 ctactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttccctt 372  Q
    |||||||||||| | |||||||||||| |||||  ||| ||||||  |||||| ||||||||||||    
T  34442654 ctactatataatcttctttttcatatccttaacatgtgccccggggcaccggttagcatttccctt 34442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 38296310 - 38296201
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||| |||    
T  38296310 aattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataattttctttttcatatcttta 38296211  T
Q  339 accagtgccc 348  Q
    ||||||||||    
T  38296210 accagtgccc 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 231 - 370
Target Start/End: Original strand, 8969451 - 8969591
Alignment:
Q  231 ataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttc 329  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||||| ||||||||||||  |||||||| ||||||||||||||||||| |||||||    
T  8969451 ataaaaggaaattattaccataaaaggaaactgcttttgactttattataaattaattacactatttcaatgcattaactactatataattttctttttc 8969550  T
Q  330 atatcattaaccagtgcccgggagaccggtaagcatttccc 370  Q
    ||||| ||||| ||||||||||  || ||| ||||||||||    
T  8969551 atatccttaactagtgcccggggcactggttagcatttccc 8969591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 372
Target Start/End: Original strand, 38590907 - 38591062
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||||||| ||| |||  |||||||||| |||||    
T  38590907 ttaagcataccataaaagggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatacattaactactgtataa 38591006  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||||||||||||||  |||||||||||||  |||| |||||| ||||||||||||    
T  38591007 tttcctttttcatattcttaaccagtgccccagggacaccggttagcatttccctt 38591062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 6580348 - 6580213
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||    
T  6580348 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaactact 6580249  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||| |||||||||||||| | |||||||||||||    
T  6580248 atatagtttcctttttcatacccttaaccagtgccc 6580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 22068347 - 22068481
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||||||||    
T  22068347 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgca-taactact 22068445  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||| ||||||||||||| |||||||||||||    
T  22068446 atataattccctttttcatatccttaaccagtgccc 22068481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 340
Target Start/End: Original strand, 26387091 - 26387218
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  26387091 cactggttaagcataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactact 26387190  T
Q  313 atataatttcctttttcatatcattaac 340  Q
    |||||||||||||||||||||| |||||    
T  26387191 atataatttcctttttcatatccttaac 26387218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 27856423 - 27856558
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||||| |||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||| |    
T  27856423 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactatt 27856522  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||||   |||||||||||||    
T  27856523 atataatttcctttttcatactcttaaccagtgccc 27856558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 231 - 367
Target Start/End: Original strand, 3668157 - 3668295
Alignment:
Q  231 ataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttc 329  Q
    |||||||||| |||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| |    
T  3668157 ataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttcc 3668256  T
Q  330 atatcattaaccagtgcccgggag-accggtaagcattt 367  Q
    ||| | |||||||||| ||||| | |||||| |||||||    
T  3668257 atacccttaaccagtgtccgggggcaccggttagcattt 3668295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 239 - 370
Target Start/End: Complemental strand, 43637297 - 43637165
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  ||||| |||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||    
T  43637297 aattattaccataaaaagaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttattcatatcctta 43637198  T
Q  339 accagtg-cccgggagaccggtaagcatttccc 370  Q
    ||||||| | ||||  |||||| ||||||||||    
T  43637197 accagtgtctcggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 22567755 - 22567629
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  |||||||||| | |||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  22567755 ttaagcataccataaaagagaattattaccataaaaggaaattatttttgactttattataaattaattacacaatttcaatacattaactactatataa 22567656  T
Q  319 tttcctttttcatatcattaaccagtg 345  Q
    |||| ||||||||||| ||||||||||    
T  22567655 tttcttttttcatatccttaaccagtg 22567629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 226 - 373
Target Start/End: Original strand, 29102322 - 29102471
Alignment:
Q  226 atatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    ||||||||||||  |||||||||| |||||| |||||||||||||||||||||| ||||||||| | | |||||||||||||||  ||||||||||| ||    
T  29102322 atatcataaaagataattattactataaaagaaaactgtttttgactttattataaattaattataaaatttcaatgtattaaccgctatataattttct 29102421  T
Q  325 ttttcatatcattaaccagtg-cccgggagaccggtaagcatttcccttt 373  Q
    |||| ||||  ||||||| || ||||||| |||||| |||||||||||||    
T  29102422 ttttgatattcttaaccaatgtcccgggataccggtcagcatttcccttt 29102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 26891727 - 26891850
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-ccc 348  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| |||| ||||| |||    
T  26891727 taaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtccc 26891826  T
Q  349 gggag-accggtaagcatttccct 371  Q
    ||| | |||||| |||||||||||    
T  26891827 gggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 220 - 371
Target Start/End: Original strand, 32360902 - 32361056
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||| |   |||||||| |||||||| |||||||    
T  32360902 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattatattatttcaatgcattaactattatataa 32361001  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    ||| |||||||| ||| |||||||||||||  |||  |||||| |||||||||||    
T  32361002 ttttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 1859321 - 1859192
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  1859321 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactact 1859222  T
Q  313 atataatttcctttttcatatcattaacca 342  Q
    ||| |||||| ||||| ||||| |||||||    
T  1859221 atacaatttctttttttatatccttaacca 1859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 250 - 367
Target Start/End: Complemental strand, 5881343 - 5881221
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttca----atgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||||| |||||||||||||||| ||||||||||||| |||||    ||| |||||||||||||||||||||||||||||||| |||||| |||    
T  5881343 taaaaggaaactctttttgactttattatcaattaattacacaatttcaatgcatgcattaactactatataatttcctttttcatatccttaacctgtg 5881244  T
Q  346 c-ccgggagaccggtaagcattt 367  Q
    | |||||| |||||| |||||||    
T  5881243 ctccgggacaccggttagcattt 5881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 209 - 341
Target Start/End: Complemental strand, 27584902 - 27584769
Alignment:
Q  209 ccggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||| ||||| ||||||||| ||| || | ||||||||||  ||||||||||||| |||||| |||||||| ||||||||||||| ||||||||  ||||    
T  27584902 ccgggcactggttaagtataccatgaatgagaattattaccataaaaggaaactgcttttgattttattataaattaattacacaatttcaatgctttaa 27584803  T
Q  308 ctactatataatttcctttttcatatcattaacc 341  Q
    |||||||||||||||| |||||||||| ||||||    
T  27584802 ctactatataatttcccttttcatatccttaacc 27584769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 220 - 348
Target Start/End: Original strand, 35851784 - 35851913
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||||||   |||||||| |||||||| |||||||    
T  35851784 ttaagcataccataaaagagaattattaccataaaatgaaactgtttttgactttattatcaattaattacattatttcaatgcattaactattatataa 35851883  T
Q  319 tttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||| ||| |||||| ||||||    
T  35851884 tttcctttttcacatccttaaccggtgccc 35851913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 28601125 - 28600991
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  ||||| |||||||||||| |||||||||| ||||||||| ||| |||||||| | ||||||||    
T  28601125 cactggttaagcataccataaaagagaattattaccataaaaagaaactgtttttaactttattatcaattaattatacaatttcaatgca-taactact 28601027  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
     ||||||| ||||||||||||| |||||||||||||    
T  28601026 ttataattccctttttcatatccttaaccagtgccc 28600991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 230 - 370
Target Start/End: Original strand, 5093582 - 5093724
Alignment:
Q  230 cataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||||| ||||||   |||||||||| || ||||||||||||||| ||||||||||||| ||| |||| |||||||||||| |||||||||||||    
T  5093582 cataaaaggaaattattatcataaaaggaaattgcttttgactttattataaattaattacacaattttaatgcattaactactatttaatttccttttt 5093681  T
Q  329 catatcattaaccagtgc-ccgggagaccggtaagcatttccc 370  Q
    |||||| ||||| ||||| ||| || ||| || ||||||||||    
T  5093682 catatccttaactagtgctccgagaaaccagttagcatttccc 5093724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 346
Target Start/End: Original strand, 11021273 - 11021382
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||   ||||| ||||||||||||||||||||||  |||||||||||| |||||||| ||||||||| |||||||||| ||||||||||| |    
T  11021273 ggaattattaccacaaaagaaaactgtttttgactttattatatattaattacacaatttcaatgcattaactaccatataatttcttttttcatatctt 11021372  T
Q  337 taaccagtgc 346  Q
    ||| ||||||    
T  11021373 taatcagtgc 11021382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 13574062 - 13574187
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||||| |||||||  ||||| ||||||||||||||||||||||| ||||||||||||| |||||||  ||||| |  ||||||     
T  13574062 ttaagcataccataaaaggaaattattaccataaaaagaaactgtttttgactttattataaattaattacacaatttcaatacattaatttttatatat 13574161  T
Q  319 tttcctttttcatatcattaaccagt 344  Q
    |||||||||||||||| |||||||||    
T  13574162 tttcctttttcatatccttaaccagt 13574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 4022503 - 4022625
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||  ||||||||||||||| ||||||   |||||||||||||||| |||||||||||| ||||||||||| | |||||||  |||||||    
T  4022503 ggacactggttaaacatatcataaaaggaaattattatcataaaaggaaactgtttctgactttattataaattaattacagaatttcaatacattaact 4022602  T
Q  310 actatataatttcctttttcatat 333  Q
    ||||| ||||||| ||||||||||    
T  4022603 actat-taatttcttttttcatat 4022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 25782857 - 25782977
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| ||||||||| ||||||||   |||||| ||| |||||||||||||||||| || |||||||||| |||||||| ||||       
T  25782857 ggacactggttaagcataccataaaagggaattattatcataaaagaaaattgtttttgactttattataaaataattacacaatttcaatgcatta--- 25782953  T
Q  310 actatataatttcctttttcatat 333  Q
    ||||||||||||||||||||||||    
T  25782954 actatataatttcctttttcatat 25782977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 212 - 328
Target Start/End: Complemental strand, 39531983 - 39531868
Alignment:
Q  212 gacactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    ||||||| ||||| |||||  ||||| || ||||||  |||||| |||||| |||||||| | |||| ||||||||||||| |||||||| |||||||||    
T  39531983 gacactggttaagcatatcgaaaaagaaaatattaccataaaagaaaactggttttgactct-ttataaattaattacacaatttcaatgcattaactac 39531885  T
Q  312 tatataatttccttttt 328  Q
    |||||||||||||||||    
T  39531884 tatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 250 - 328
Target Start/End: Original strand, 15079023 - 15079100
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||| ||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||||||||||||    
T  15079023 taaaaggaaattgtttttgacttt-ttataaattaattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 25772269 - 25772149
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta-ct 312  Q
    |||||||||||||| ||||||||| ||||||||   |||| ||||| | |||||||||||||||| ||||||||||||| ||||| || ||||| ||  |    
T  25772269 actgattaagtataccataaaagggaattattatcataaagggaaattatttttgactttattataaattaattacacaatttcattgcattaattattt 25772170  T
Q  313 atataatttcctttttcatat 333  Q
     ||||||||||||||||||||    
T  25772169 ttataatttcctttttcatat 25772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 34123089 - 34123211
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||||||||||||||||||||| |||| |||||||||||||  ||||| | |||||||| ||||||||||| |||||  |||  | ||||||| |||     
T  34123089 taaaaggaaactgtttttgacttt-ttataaattaattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagtacccc 34123187  T
Q  350 ggag--accggtaagcatttccct 371  Q
    ||||  |||||| |||||||||||    
T  34123188 ggaggcaccggttagcatttccct 34123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 15146753 - 15146683
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 321  Q
    |||||||||| | ||||||||||| |||| ||||||||| ||| ||||||||||||||||| ||||||||||    
T  15146753 taaaaggaaattatttttgacttt-ttataaattaattatacaatttcaatgtattaactattatataattt 15146683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 10820615 - 10820528
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||  |||||||||||||||||| ||||| |||| ||||||||| ||| | ||||||||||||||| | ||||||||| |||||    
T  10820615 aattattaccataaaaggaaactgtttttaacttt-ttataaattaatta-acaatctcaatgtattaactattttataatttctttttt 10820528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 40210306 - 40210252
Alignment:
Q  275 ttatgaattaattacac-attttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||    
T  40210306 ttatgaattaattacaccattttcaatgcaataactactataaaatttccttttt 40210252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 266 - 372
Target Start/End: Original strand, 44854419 - 44854528
Alignment:
Q  266 ttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaag 362  Q
    |||||||  ||||| |||||||| ||| ||||||||| | ||| ||  ||||||||||||||||  |||| |||||||||| |||||||| |||||| ||    
T  44854419 ttgacttatttatggattaattaaacaattttcaatgcaataattaacatataatttcctttttattatccttaaccagtgccccgggagtaccggttag 44854518  T
Q  363 catttccctt 372  Q
    ||||||||||    
T  44854519 catttccctt 44854528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 20431547 - 20431482
Alignment:
Q  264 ttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||| ||  | |||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  20431547 ttttgactttttttagtattaattacacagttttcaatgcaataactacaatataatttccttttt 20431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 16807318 - 16807366
Alignment:
Q  281 attaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  16807318 attaattacacagttttcaatgcaataactactatataattttcttttt 16807366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 16846599 - 16846647
Alignment:
Q  281 attaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  16846599 attaattacacagttttcaatgcaataactactatataattttcttttt 16846647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 30834456 - 30834504
Alignment:
Q  281 attaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||||| ||||||||| | |||||| |||||||||||||||||    
T  30834456 attaattacacagttttcaatgcaataactattatataatttccttttt 30834504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 8e-47; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 250 - 376
Target Start/End: Original strand, 17333346 - 17333473
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  17333346 taaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccg 17333445  T
Q  350 ggag-accggtaagcatttcccttttaa 376  Q
    || | |||||| |||||||||| |||||    
T  17333446 ggggcaccggttagcatttcccatttaa 17333473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 214 - 347
Target Start/End: Original strand, 9266755 - 9266889
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||    
T  9266755 cactggttaagtataccataaaagcgaattattaccataaaaggaaactgtttttgactttattatgaattaattacacaatttcaatgcattaaatact 9266854  T
Q  313 atataatttcctttttcatatcattaaccagtgcc 347  Q
    |||||||||||||||||||||| ||||||||||||    
T  9266855 atataatttcctttttcatatccttaaccagtgcc 9266889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 214 - 372
Target Start/End: Complemental strand, 15227898 - 15227737
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  15227898 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 15227799  T
Q  313 atataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccctt 372  Q
    |||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||||    
T  15227798 atataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttccctt 15227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 5694480 - 5694321
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  5694480 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactact 5694381  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 370  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||  |||||| ||||||||||    
T  5694380 atataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 51065775 - 51065937
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  51065775 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 51065874  T
Q  313 atataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttcccttt 373  Q
    ||||||||| |||||||||||| ||||||||||  || |||| |||||| |||||||||||||    
T  51065875 atataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttcccttt 51065937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 220 - 371
Target Start/End: Original strand, 19031848 - 19032002
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||||||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  19031848 ttaagcatatcataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgttttaactactatataa 19031947  T
Q  319 tttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccct 371  Q
    |||||||||||||||| ||||| | || ||| |||| |||||| |||||||||||    
T  19031948 tttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 45431437 - 45431278
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| |||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  45431437 cactggttaagtatatcataaaagagaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactact 45431338  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccct 371  Q
    |||||||||||||||||||||| |||| |||  || ||| | |||||| |||||||||||    
T  45431337 atataatttcctttttcatatccttaatcaggccctgggggcaccggttagcatttccct 45431278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 51368812 - 51368974
Alignment:
Q  214 cactgattaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||| |||||||||||| |||||||||||| |||||||| ||||||| |||||| |||||| |||||||| ||||||||||    
T  51368812 cactggttaagcataccataaaatggaattattactataaaaggaaactatttttgacattattataaattaactacacaatttcaatgcattaactact 51368911  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttt 373  Q
    |||||||||||||||||||| | ||||||||| ||| ||||  |||||| |||||||||||||    
T  51368912 atataatttcctttttcatacccttaaccagtaccctggaggtaccggttagcatttcccttt 51368974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 42770017 - 42770178
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  ||||||||||||||||||||  ||||||| ||||||||||||| |||||||| ||||||||||    
T  42770017 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactact 42770116  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||||||||||||||||||| |||||||||||||||  |||  |||||| ||||||||||||    
T  42770117 atataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttccctt 42770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 29657930 - 29657770
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||   |||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||    
T  29657930 cactggttaagcataccataaaagggaattattaccaaaaaaggaaactgtttttgactttattatcaattaattatacaatttcaatgcattaactact 29657831  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    |||||||||||||||| ||||| |||||||||||||  |||  |||||| |||||||||||    
T  29657830 atataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 47010152 - 47010019
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||||||||||||||||| |||||||| ||||||||||||| |||||||  ||||||||||    
T  47010152 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgaatttattataaattaattacacaatttcaatacattaactact 47010053  T
Q  313 atataatttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||||||||| |||||||||||    
T  47010052 atataatttcctttttcatatccttaaccagtgc 47010019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 3784737 - 3784873
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||| | ||||| ||| ||||||||||| |||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  3784737 ggacacgggttaagcataccataaaaggaaattattaccataaaagaaaattgtttttgactttattatcaattaattacacaatttcaatgcattaact 3784836  T
Q  310 actatataatttcctttttcatatcattaaccagtgc 346  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3784837 actatataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 18043321 - 18043158
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  |||||| |||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  18043321 cactggttaagcataccataaaatagaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 18043222  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctttt 374  Q
    |||||||||||||||| ||| | ||||||||||||| ||||  |||||| ||||||||||||||    
T  18043221 atataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctttt 18043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 250 - 371
Target Start/End: Complemental strand, 29210535 - 29210412
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||||||     
T  29210535 taaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcccc 29210436  T
Q  350 ggag--accggtaagcatttccct 371  Q
    ||||  |||||| |||||||||||    
T  29210435 ggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 212 - 347
Target Start/End: Original strand, 36446350 - 36446485
Alignment:
Q  212 gacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta 310  Q
    ||||||| ||||  ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  36446350 gacactggttaaacataccataaaagggaattattactataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 36446449  T
Q  311 ctatataatttcctttttcatatcattaaccagtgcc 347  Q
    |||||||||||||||||| ||||  ||||||||||||    
T  36446450 ctatataatttccttttt-atattcttaaccagtgcc 36446485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 12072109 - 12072224
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  12072109 aaaaggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactacataatttcctttttcata 12072208  T
Q  333 tcattaaccagtgccc 348  Q
    || |||||| ||||||    
T  12072209 tccttaaccggtgccc 12072224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 353
Target Start/End: Complemental strand, 38163003 - 38162869
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  38163003 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataa 38162904  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag 353  Q
    ||| |||||||||| | ||||||||||||| ||||    
T  38162903 ttttctttttcatacccttaaccagtgccccggag 38162869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 215 - 343
Target Start/End: Complemental strand, 3097817 - 3097688
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||| ||||||||||| |||||||  |||||| |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||    
T  3097817 actggttaagcataccataaaaggaaattattaccataaaagaaaactgtttttgactttattataaattaattacataatttcaatgcattaactacta 3097718  T
Q  314 tataatttcctttttcatatcattaaccag 343  Q
    ||||||||||||||||||||| ||||||||    
T  3097717 tataatttcctttttcatatccttaaccag 3097688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 239 - 371
Target Start/End: Complemental strand, 48071615 - 48071482
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||| |||||| |||    
T  48071615 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattatataatttccttttacatatcctta 48071516  T
Q  339 accagtgcccgggag-accggtaagcatttccct 371  Q
    |||||| ||| |||| | |||| |||||||||||    
T  48071515 accagtaccccggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 8472938 - 8473070
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||| ||| |||| |||||||    
T  8472938 ggacactggttaagtataccataaaagagaattattattataaaatgaaactgtttttgactttattataaattaattacacaattttaatgcattaact 8473037  T
Q  310 actatataatttcctttttcatatcattaacca 342  Q
    | ||||||||||||||||| ||||| |||||||    
T  8473038 attatataatttccttttttatatccttaacca 8473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 215 - 353
Target Start/End: Complemental strand, 6770495 - 6770356
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||||||||||||| ||||||||   ||||| ||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||||    
T  6770495 actggttaagcatatcataaaagggaattattatcataaaatgaaactgtttttgactttattataaattaattacacaatttcaatacattaactacta 6770396  T
Q  314 tataatttcctttttcatatcattaaccagtgcccgggag 353  Q
    ||||||||||||||||||||| ||||  ||||||| ||||    
T  6770395 tataatttcctttttcatatccttaattagtgccccggag 6770356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 373
Target Start/End: Complemental strand, 12307076 - 12306915
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||     
T  12307076 cactggttaagcataccataaaagagaattattaccataaaaggaatctgtttttgactttattataaattaattacacaatttcaatgtattaactac- 12306978  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttt 373  Q
    ||||||||| ||||||| |||||||||| || ||||  |||  |||||| |||||||||||||    
T  12306977 atataattttctttttcgtatcattaactagagccccagaggcaccggttagcatttcccttt 12306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 24178490 - 24178625
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||| ||| |||||||  ||||||||||||| |||||||||||||||  |||||||||||| |||||||| |||||||| |    
T  24178490 cactggttaagcataccataaaatgaaattattaccataaaaggaaactgcttttgactttattatagattaattacacaatttcaatgcattaactatt 24178589  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||||||||| |||||||||||||    
T  24178590 atataatttcctttttcatatccttaaccagtgccc 24178625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 372
Target Start/End: Complemental strand, 29683355 - 29683193
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||  |||||||| ||||||||||    
T  29683355 cactggttaagcataccataaaagtgaattattactataaaatgaaactgtttttgactttattataaattaattatacgatttcaatgcattaactact 29683256  T
Q  313 atataatttcct-ttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||||||||||| |||| ||||| |||||||||||||  |||  |||||| ||||||||||||    
T  29683255 atataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 30294414 - 30294537
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||| ||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  30294414 ttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataa 30294513  T
Q  319 tttcctttttcatatcattaacca 342  Q
    |||||||||||||||| |||||||    
T  30294514 tttcctttttcatatccttaacca 30294537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 345
Target Start/End: Complemental strand, 43286882 - 43286749
Alignment:
Q  213 acactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||| ||||| ||| |||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||||| | ||||||   ||||||||     
T  43286882 acactggttaagcataccataaaagagaattattactataaaaggaaactatttttgactttattataaattaattacataatttcaaaacattaactat 43286783  T
Q  312 tatataatttcctttttcatatcattaaccagtg 345  Q
    ||||||||||||||||||||||| ||||||||||    
T  43286782 tatataatttcctttttcatatccttaaccagtg 43286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 237 - 345
Target Start/End: Original strand, 35985672 - 35985780
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |    
T  35985672 ggaattattaccataaaaggaaactgtttttcactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcct 35985771  T
Q  337 taaccagtg 345  Q
    ||| |||||    
T  35985772 taaacagtg 35985780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 230 - 370
Target Start/End: Complemental strand, 38335312 - 38335170
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| |||||||||   |||||| |||||||||||||||||||||| ||||||||||||| || ||||| ||||| ||||||||||||||||||||    
T  38335312 cataaaagtgaattattatcataaaagaaaactgtttttgactttattataaattaattacacaattacaatgcattaattactatataatttccttttt 38335213  T
Q  329 catatcattaaccagtg-cccgggagaccggtaagcatttccc 370  Q
    |||||| |||||||||| |||  || |||||| ||||||||||    
T  38335212 catatctttaaccagtgtcccaagacaccggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 14350305 - 14350465
Alignment:
Q  214 cactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    ||||| ||||| ||| ||| || |||||||||||  |||||||||| |||||||||| ||||||| ||||||||||||| ||| |||| ||||||||| |    
T  14350305 cactggttaagcataccattaagggaattattaccataaaaggaaattgtttttgacattattataaattaattacacaattttaatgcattaactacaa 14350404  T
Q  314 tataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccctt 372  Q
    ||||||||||||||||||| | |||||| |||| ||||| | |||||| ||||||||||||    
T  14350405 tataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttccctt 14350465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 375
Target Start/End: Complemental strand, 30657723 - 30657603
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggag-a 354  Q
    |||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||||||||  ||||| |||| |||||||| |    
T  30657723 aaactgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagca 30657624  T
Q  355 ccggtaagcatttccctttta 375  Q
    ||||| |||||||||||||||    
T  30657623 ccggttagcatttccctttta 30657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 368
Target Start/End: Original strand, 38701985 - 38702117
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    ||||||||||  |||||| |||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||||||| |||||||||||||| | ||    
T  38701985 gaattattaccataaaagaaaactgtttttgacattattataaattaattacataatttcaatgcattaactactatatagtttcctttttcataccctt 38702084  T
Q  338 aaccagtg-cccgggag-accggtaagcatttc 368  Q
    |||||||| |||||||| |||||| ||||||||    
T  38702085 aaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 13961370 - 13961211
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| || |||||||  ||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  13961370 cactggttaagcataccataaaagaaaattattaccataaaatgaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactact 13961271  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    |||||||||  ||||| ||||| |||||| ||||||  |||  |||||| |||||||||||    
T  13961270 atataattt-tttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 50128196 - 50128325
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| |||||||| ||||||||||  ||||| ||||||| |||| |||||||||| ||||||||||||| |||||||| |||||||    
T  50128196 ggacactggttaagcataccataaaagagaattattaccataaaatgaaactgcttttaactttattataaattaattacacaatttcaatgcattaact 50128295  T
Q  310 actatataatttcctttttcatatcattaa 339  Q
    ||||| |||||| |||||||||||| ||||    
T  50128296 actatgtaattttctttttcatatccttaa 50128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 15282591 - 15282672
Alignment:
Q  263 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 344  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  15282591 tttttgactttattataaattaattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 340
Target Start/End: Original strand, 47532704 - 47532824
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||| | |||||||||| | |||||||||||||||| | ||||||||||| |||||||| ||||||||||||||||    
T  47532704 ttaagcataccataaaagggaattattattataaaaggaaattatttttgactttattatca-ttaattacacaatttcaatgcattaactactatataa 47532802  T
Q  319 tttcctttttcatatcattaac 340  Q
    ||| |||||||||||| |||||    
T  47532803 ttttctttttcatatccttaac 47532824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 348
Target Start/End: Complemental strand, 41730461 - 41730329
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtatta---actactata 315  Q
    ||||| ||| ||||||||| ||||||||   ||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||   |||||||||    
T  41730461 ttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactactata 41730362  T
Q  316 taatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||| ||||||||||  |||||| ||||||    
T  41730361 taatttcttttttcatattcttaacccgtgccc 41730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 367
Target Start/End: Original strand, 48383144 - 48383294
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||||   |||||||  |||||||   ||||||    
T  48383144 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacattatttcaatacattaactttcatataa 48383243  T
Q  319 tttcctttttcatatcattaaccagtg-cccgggag-accggtaagcattt 367  Q
    ||| |||||||| ||| |||||||||| |||||||| |||||| |||||||    
T  48383244 ttttctttttcacatccttaaccagtgccccgggagcaccggttagcattt 48383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 342
Target Start/End: Original strand, 45449287 - 45449400
Alignment:
Q  230 cataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||||||||| | ||||||||||  ||| |||| ||||||||||||||||||| ||||||    
T  45449287 cataaaaggcaattattaccataaaaggaaactgcttttgactttattataatttaattacactattttaatgcattaactactatataattttcttttt 45449386  T
Q  329 catatcattaacca 342  Q
     ||||| |||||||    
T  45449387 tatatctttaacca 45449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 263 - 379
Target Start/End: Original strand, 35700728 - 35700843
Alignment:
Q  263 tttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaag 362  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||  |||| |||||||||  |||||| ||| || |     
T  35700728 tttttgacttt-ttataaattaattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagtatccgggacaccagttaa 35700826  T
Q  363 catttcccttttaattt 379  Q
    |||||||||| ||||||    
T  35700827 catttcccttataattt 35700843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 233 - 348
Target Start/End: Original strand, 23473511 - 23473626
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    ||||| |||||||||  ||||||||||||| |||  |||||||||| ||||||||| ||| |||||||  ||||||| ||||||||| ||||||||||||    
T  23473511 aaaagaaattattaccataaaaggaaactgctttaaactttattataaattaattatacaatttcaatacattaactgctatataatctcctttttcata 23473610  T
Q  333 tcattaaccagtgccc 348  Q
    || ||||||| |||||    
T  23473611 tccttaaccaatgccc 23473626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 37503335 - 37503260
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttt 326  Q
    |||||||||| | ||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  37503335 taaaaggaaaatatttttgatttt-ttataaattaattacacaatttcaatgtattaactactatataatttccttt 37503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 233 - 328
Target Start/End: Original strand, 37315315 - 37315409
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||| ||||||||   |||||| ||||||| ||||||||| |||| ||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  37315315 aaaagaaattattagcataaaagaaaactgtctttgacttt-ttataaattaattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 233 - 348
Target Start/End: Complemental strand, 52749741 - 52749626
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  |||||  ||| ||||||| |||||||| | |||| | || ||| |||||||  |||||||| |||||||||||||||||||||    
T  52749741 aaaaggaattattaccataaaaaaaaattgtttttaactttattgtaaatttagtatacaatttcaatacattaactattatataatttcctttttcata 52749642  T
Q  333 tcattaaccagtgccc 348  Q
    || ||||||| |||||    
T  52749641 tctttaaccaatgccc 52749626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 26228300 - 26228219
Alignment:
Q  265 tttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 346  Q
    ||||| |||||||| ||||||||||| | |||||||| |||||||||||||||||||| ||||| || || |||||||||||    
T  26228300 tttgattttattataaattaattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgc 26228219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 39497429 - 39497340
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 339  Q
    |||||| ||| | |||||||||||||||| ||||||||| | | ||| |||| ||||||||||||||||||| |||||||||||| ||||    
T  39497429 taaaagaaaattatttttgactttattataaattaattatataattttaatgcattaactactatataattttctttttcatatccttaa 39497340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 369
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  298 aatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccggtaagcatttcc 369  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||| |||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccgggacaccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 350
Target Start/End: Complemental strand, 30217901 - 30217782
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcc--tttttca 330  Q
    ||||| |||||||||  |||||| ||||| |||||||||||||||| ||||||||| | | ||| |||| |||||||||| | ||||| ||  |||||||    
T  30217901 aaaagaaattattaccataaaagaaaactatttttgactttattataaattaattaaataatttaaatgcattaactactctctaattccctttttttca 30217802  T
Q  331 tatcattaaccagtgcccgg 350  Q
    |||| ||| |||||||||||    
T  30217801 tatccttagccagtgcccgg 30217782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 39912363 - 39912441
Alignment:
Q  270 ctttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||| |||| ||||||| ||||| |||||||| |||||||| |||||||||||| |||| ||||| |||| ||||||||    
T  39912363 cttttttataaattaatcacacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgccc 39912441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 52431713 - 52431632
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataattt 321  Q
    |||||||||  |||||| ||| || ||||||| || |||| ||||||||||||| |||||||| |||||||||||||||||||    
T  52431713 aattattaccataaaagaaaattgcttttgacatt-ttataaattaattacacaatttcaatgcattaactactatataattt 52431632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 28481954 - 28481844
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag--a 354  Q
    ||||||||||| | |||||||| ||||||||||||| ||| |||| ||||    || ||||||||||||||||||||| |||||||| ||||  |||  |    
T  28481954 aaactgttttt-attttattataaattaattacacaattttaatgcatta----ctgtataatttcctttttcatatccttaaccagggcccaagaggca 28481860  T
Q  355 ccggtaagcatttccc 370  Q
    ||||| ||||||||||    
T  28481859 ccggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 370
Target Start/End: Complemental strand, 39081898 - 39081803
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccc 370  Q
    |||| ||||||||| | | |||||||  |||||||| ||||||||||| |||||  |||  ||||||||||||||| | |||||| ||||||||||    
T  39081898 ttataaattaattataaaatttcaatacattaactagtatataatttcatttttagtatgcttaaccagtgcccggaacaccggttagcatttccc 39081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 3838866 - 3838936
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||| ||||||||||||| ||| |||| |||||||| |||||||||||||||||  |||  ||||||||||    
T  3838866 ttataaattaattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 344
Target Start/End: Original strand, 14881043 - 14881124
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 344  Q
    ||||||||||||||||||||||||||||| ||||||||| |||             ||||| ||||||||||||||||||||||| |||||||||    
T  14881043 taaaaggaaactgtttttgactttattataaattaattataca-------------aactattatataatttcctttttcatatccttaaccagt 14881124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 298 - 347
Target Start/End: Original strand, 10976014 - 10976063
Alignment:
Q  298 aatgtattaactactatataatttcctttttcatatcattaaccagtgcc 347  Q
    |||| ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  10976014 aatgcattaactactatataatctcctttttcatatccttaacaagtgcc 10976063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 347
Target Start/End: Complemental strand, 49867560 - 49867454
Alignment:
Q  241 ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa-tttcctttttcatatcattaa 339  Q
    |||||||| ||||| |||| | ||| ||||||| || | ||||||||||||| ||||||   ||||| |||||||||| |||| |||||  |||||||||    
T  49867560 ttattactataaaatgaaattttttctgacttt-ttgtaaattaattacacaatttcaaaacattaattactatataactttcttttttagtatcattaa 49867462  T
Q  340 ccagtgcc 347  Q
    ||||||||    
T  49867461 ccagtgcc 49867454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 19010738 - 19010778
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttatta 277  Q
    |||||||||||  |||||||||||| |||||||||||||||    
T  19010738 ggaattattaccataaaaggaaactatttttgactttatta 19010778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 33644423 - 33644495
Alignment:
Q  275 ttatgaattaattacac-attttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 346  Q
    ||||||||||||||||| |||||||||| | ||| || |||||||||| |||||| ||| | |||||| ||||    
T  33644423 ttatgaattaattacacaattttcaatgcaataattattatataattttcttttttatagccttaacctgtgc 33644495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 43195260 - 43195179
Alignment:
Q  263 tttttgactttattatgaattaattacacatttt---caatgtattaactactatataatttc-ctttttcatatcattaacc 341  Q
    ||||||||||| ||||||||| |||| |||||||   ||||| | ||||||||||||||||||  ||||| ||||||||||||    
T  43195260 tttttgacttt-ttatgaattgattatacatttttttcaatgcaataactactatataatttctgtttttaatatcattaacc 43195179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 211 - 370
Target Start/End: Complemental strand, 20924154 - 20923992
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||||||| |||||||| |||||||||| |||||||||||||||||||||  ||||||| ||||||||||||| |||||||| |||||||    
T  20924154 ggacactggttaagtataccataaaagagaattattaccttaaaaggaaactgtttttgatattattataaattaattacacaatttcaatgaattaact 20924055  T
Q  310 actatataatttcctttttcatatcattaaccagtgcccggga--gaccggtaagcatttccc 370  Q
    ||||||||||||||||||||||| | ||||||||||||| |||   |||||| ||||||||||    
T  20924054 actatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 218 - 371
Target Start/End: Complemental strand, 272375 - 272219
Alignment:
Q  218 gattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 316  Q
    ||||||| ||| ||||||||| |||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  272375 gattaagcataccataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatat 272276  T
Q  317 aatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    |||||||||||||||||| |||||||||||||  |||  |||||| |||||||||||    
T  272275 aatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 212 - 348
Target Start/End: Original strand, 42964274 - 42964411
Alignment:
Q  212 gacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaacta 310  Q
    ||||||| ||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  42964274 gacactggttaagcatatcataaaagtgaattattactataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaacta 42964373  T
Q  311 ctatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||| |||||| ||||||||||| |||||||||||||    
T  42964374 ctataaaatttcatttttcatatccttaaccagtgccc 42964411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 214 - 371
Target Start/End: Complemental strand, 49893490 - 49893330
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||||||||| ||| ||||||||| |||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||| |    
T  49893490 cactgattaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatagattaattacacaatttcaatgcattaactatt 49893391  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccct 371  Q
    |||||||||||||||||||||| |||||||||||||  |||  |||||| |||||||||||    
T  49893390 atataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 48725430 - 48725271
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  48725430 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaattact 48725331  T
Q  313 atataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 370  Q
    |||||||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||    
T  48725330 atataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 220 - 374
Target Start/End: Complemental strand, 46352787 - 46352630
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  46352787 ttaagcataccataaaagggaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactgtataa 46352688  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 374  Q
    |||||||||||||||| |||||||||||||  |||  |||||| ||||||||||||||    
T  46352687 tttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctttt 46352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 43787030 - 43786871
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  ||||||||||||||||||||  ||||||| ||||||||||||| |||||||| ||||||||||    
T  43787030 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactact 43786931  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 370  Q
    |||||||||||||||||||| ||||||||||||||| ||||  |||||| ||||||||||    
T  43786930 atataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 346
Target Start/End: Complemental strand, 858742 - 858615
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  858742 ttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcaatgcattaactactatataa 858643  T
Q  319 tttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||| ||||| |||||    
T  858642 tttcctttttcatatccttaactagtgc 858615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 239 - 346
Target Start/End: Original strand, 41553993 - 41554100
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  41553993 aattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 41554092  T
Q  339 accagtgc 346  Q
    ||||||||    
T  41554093 accagtgc 41554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 214 - 373
Target Start/End: Complemental strand, 52520840 - 52520678
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  52520840 cactggttaagcataccataaaatagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 52520741  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttt 373  Q
    |||||||||||||||||||| | |||||||||||||  |||  |||||| |||||||||||||    
T  52520740 atataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttt 52520678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 230 - 347
Target Start/End: Complemental strand, 2119572 - 2119456
Alignment:
Q  230 cataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttc 329  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||||||||    
T  2119572 cataaaaggaattattacat-aaaaggaaattgtttttgactttattataaattaattactcaatttcaatgcattaactactatataatttcctttttc 2119474  T
Q  330 atatcattaaccagtgcc 347  Q
    ||||| ||||||||||||    
T  2119473 atatctttaaccagtgcc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 237 - 370
Target Start/End: Complemental strand, 2505484 - 2505350
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||| |    
T  2505484 ggaattattaccataaaaggaaactatttttgactttattatgaattaattacacaatttcaatgcactaactactatataatttcctttttcatatctt 2505385  T
Q  337 taaccagtgcccgggag-accggtaagcatttccc 370  Q
    |||||| || || |||| | |||| ||||||||||    
T  2505384 taaccaatgtccaggagcagcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 370
Target Start/End: Complemental strand, 4168336 - 4168183
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  4168336 ttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatacattaactactatataa 4168237  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccc 370  Q
    |||||||||| ||||| ||||||||| ||| ||||  |||||| ||||||||||    
T  4168236 tttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 13160055 - 13159929
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||| ||| ||||||| ||| |||||||  ||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13160055 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 13159956  T
Q  314 tataatttcctttttcatatcattaac 340  Q
    ||||||||||||||||||||| |||||    
T  13159955 tataatttcctttttcatatccttaac 13159929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 214 - 372
Target Start/End: Original strand, 40362607 - 40362768
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||    
T  40362607 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaattttaatgcattaactact 40362706  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    |||||||||| ||||||||||| |||| |||||||| ||||  || ||| ||||||||||||    
T  40362707 atataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 366
Target Start/End: Complemental strand, 7468569 - 7468417
Alignment:
Q  214 cactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    ||||||||||| ||| ||||||||| |||||||   |||||| |||||| ||||||||||||||| ||||||||| ||| |||||||| |||||||||||    
T  7468569 cactgattaagcataccataaaagggattattatcataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactacta 7468470  T
Q  314 tataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatt 366  Q
    |||||||||||||||||| || |||||||||| || || | ||||| ||||||    
T  7468469 tataatttcctttttcatttccttaaccagtgtcccgggggccggttagcatt 7468417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 39074577 - 39074419
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  39074577 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaactact 39074479  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    |||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  39074478 atataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 41304156 - 41304004
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||   |||||||| ||||| ||||||||||    
T  41304156 ttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgactttattatcaattaattacaa--tttcaatgcattaattactatataa 41304059  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 371  Q
    |||||||||||||||| ||||||| ||||| ||||  |||||| |||||||||||    
T  41304058 tttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 350
Target Start/End: Complemental strand, 22249021 - 22248908
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||  | |||||||||||||||||||||||||||||| |    
T  22249021 ggaattattaccataaaagaaaactgtttttgactttattatcaattaattacacaatttcaatacaataactactatataatttcctttttcatatcct 22248922  T
Q  337 taaccagtgcccgg 350  Q
    |||| |||||||||    
T  22248921 taactagtgcccgg 22248908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 220 - 351
Target Start/End: Original strand, 10617317 - 10617449
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||||||| |||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  10617317 ttaagcataccataaaagggaattattaccataaaaggaaattgtttttgactttattataaattaattacacaattttaatgcattaactactatataa 10617416  T
Q  319 tttcctttttcatatcattaaccagtgcccggg 351  Q
    |||||||||| ||||| |||| ||||| |||||    
T  10617417 tttccttttttatatccttaatcagtgtccggg 10617449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 374
Target Start/End: Complemental strand, 18014831 - 18014668
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||||||||| ||| ||||||||||| ||||||   |||||||||||||||||| ||||||||||   ||||||||||| |||||||| ||||||||||    
T  18014831 cactgattaagcataccataaaaggaaattattatcataaaaggaaactgtttttaactttattatagtttaattacacaatttcaatgcattaactact 18014732  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 374  Q
    ||||||||| |||||||||||| |||| ||||||||  |||  ||| || ||||||||||||||    
T  18014731 atataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttccctttt 18014668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 28139468 - 28139336
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||||||| ||||||||| |||||||||  ||||||||| ||| ||||||||||||||| ||||||||| ||| |||||||| ||||||||||    
T  28139468 cactgtttaagtataccataaaagggaattattaccataaaaggaatctgcttttgactttattataaattaattatacaatttcaatgcattaactact 28139369  T
Q  313 atataatttcctttttcatatcattaaccagtg 345  Q
    || ||||||| ||||||||||| ||||||||||    
T  28139368 atttaatttcttttttcatatccttaaccagtg 28139336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 53489888 - 53489986
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  53489888 taaaaggaaactgtttttgacattattataaattaattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccc 53489986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 220 - 372
Target Start/End: Original strand, 11308244 - 11308398
Alignment:
Q  220 ttaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataat 319  Q
    ||||| ||| ||||||||||||||||||  |||||||||||| ||||||| |||||||| |||||||||||   |||||||| |||||||| ||||||||    
T  11308244 ttaagcataccataaaaggaattattaccataaaaggaaactatttttgattttattatcaattaattacattatttcaatgcattaactattatataat 11308343  T
Q  320 ttcctttttcatatcattaaccagtgcccggg--agaccggtaagcatttccctt 372  Q
    ||||||||||| ||| |||| ||||| || ||  | |||||| ||||||||||||    
T  11308344 ttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 239 - 346
Target Start/End: Original strand, 43269792 - 43269899
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||| |||||||||||||| ||||| |||||||| ||||||||||| | |||||||| |||||||||||| |||||||| |||||||||| |||    
T  43269792 aattattactataaaaggaaactgtgtttgattttattataaattaattacataatttcaatgcattaactactatgtaatttcccttttcatatcctta 43269891  T
Q  339 accagtgc 346  Q
    ||||||||    
T  43269892 accagtgc 43269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 214 - 347
Target Start/End: Complemental strand, 42548254 - 42548120
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||| |||| | |||||||||||||||| ||||||||||| | |||||||| ||||||||||    
T  42548254 cactggttaagcataccataaaagggaattattaccataaaatgaaattatttttgactttattataaattaattacataatttcaatgcattaactact 42548155  T
Q  313 atataatttcctttttcatatcattaaccagtgcc 347  Q
    |||||||||| ||||||||||| |||| |||||||    
T  42548154 atataatttcttttttcatatctttaagcagtgcc 42548120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 215 - 345
Target Start/End: Original strand, 50395591 - 50395721
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||  |||||||||||| ||||||||||  |||||||||| |||||| ||||||||||| ||||||||||||| |||| ||| ||||||||||     
T  50395591 actgattaatcatatcataaaagagaattattaccataaaaggaaattgtttt-gactttattatcaattaattacacaatttctatgcattaactactg 50395689  T
Q  314 tataatttcctttttcatatcattaaccagtg 345  Q
    |||||||| ||||||||||||  |||||||||    
T  50395690 tataattttctttttcatatccctaaccagtg 50395721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 220 - 353
Target Start/End: Complemental strand, 52246736 - 52246601
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaact-gtttttgactttattatgaattaattacacattttcaatgtattaactactatata 317  Q
    ||||| ||| ||||||||||| |||||||| |||||  ||| | ||||||||||||||||| ||||||||| ||| |||||||| |||||| ||||||||    
T  52246736 ttaagcataccataaaaggaaattattactataaaaaaaaaattgtttttgactttattataaattaattatacaatttcaatgcattaacaactatata 52246637  T
Q  318 atttcctttttcatatcattaaccagtgcccgggag 353  Q
    ||||| ||||||||||| ||||||||||||| ||||    
T  52246636 atttcatttttcatatccttaaccagtgccccggag 52246601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 320
Target Start/End: Complemental strand, 33141043 - 33140937
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||| ||||||||||||| |||||||||  |||||| |||||| ||||||||||||||| ||||||||| ||| |||||||| |||||||||||    
T  33141043 actgattaagcatatcataaaagggaattattaccataaaagaaaactgcttttgactttattataaattaattatacaatttcaatgcattaactacta 33140944  T
Q  314 tataatt 320  Q
    |||||||    
T  33140943 tataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 2938073 - 2938198
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  ||||| |||| |||||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||||    
T  2938073 ttaagcataccataaaagtgaattattaccataaaatgaaattgtttttgactttattataaattaatcacacaatttcagtgcattaactactatataa 2938172  T
Q  319 tttcctttttcatatcattaaccagt 344  Q
    ||| |||||| ||||| |||||||||    
T  2938173 ttttcttttttatatctttaaccagt 2938198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 348
Target Start/End: Original strand, 49529309 - 49529431
Alignment:
Q  230 cataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac---tatataatttcctt 325  Q
    ||||||||||| |||||||  |||||||||| |||||||||||||||||| ||||||||||| | |||||||| |||||||||   |||||||||| |||    
T  49529309 cataaaaggaaattattaccataaaaggaaaatgtttttgactttattataaattaattacataatttcaatgcattaactactagtatataattttctt 49529408  T
Q  326 tttcatatcattaaccagtgccc 348  Q
    ||||||||| |||| ||||||||    
T  49529409 tttcatatccttaatcagtgccc 49529431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 226 - 348
Target Start/End: Complemental strand, 24488513 - 24488390
Alignment:
Q  226 atatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    |||||||||||| ||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||  |||| ||| |||||||| |||||||||||||    
T  24488513 atatcataaaagagaattattaccataaaaagaaactgtttttgattttattatcaattaattacactatttccatgcattaactattatataatttcct 24488414  T
Q  325 ttttcatatcattaaccagtgccc 348  Q
    |||| | ||  |||||||||||||    
T  24488413 tttttacattcttaaccagtgccc 24488390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 340
Target Start/End: Complemental strand, 29241772 - 29241669
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    ||||||||||   ||||| ||| ||||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||||| |||||||||| |    
T  29241772 ggaattattatcataaaaagaatctgtttttgactttattataaattaattacataatttcaatgcattaactactatataatttccattttcatatcct 29241673  T
Q  337 taac 340  Q
    ||||    
T  29241672 taac 29241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 220 - 333
Target Start/End: Original strand, 41993653 - 41993766
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||| | |||||||||||||||||| |||||||||| ||||||||||| | |||||||| ||||||||||||||||    
T  41993653 ttaagcataccataaaagagaattatta-tataaaaggaaactgtttttaactttattataaattaattacataatttcaatgcattaactactatataa 41993751  T
Q  319 tttcctttttcatat 333  Q
    |||| ||||| ||||    
T  41993752 tttcatttttaatat 41993766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 50298973 - 50299103
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||||||| ||||| || |||||||||   ||||| ||||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||    
T  50298973 actggttaagtataccataagagtgaattattatcataaaaagaaactgtttttgactttattataaattaattacacaatttcagtgcattaactacta 50299072  T
Q  314 tataatttcctttttcatatcattaaccagt 344  Q
    |||||||| | |||| ||||| |||| ||||    
T  50299073 tataattttcctttttatatctttaatcagt 50299103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 315
Target Start/End: Complemental strand, 6842754 - 6842676
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactata 315  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||    
T  6842754 ggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactattata 6842676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 38852332 - 38852216
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtatta---actactatataatttcctttttcatatcattaaccagtgcccgggag 353  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||   |||||||||||||||| ||||| ||||| ||||| | || || || |    
T  38852332 aaactgtttttgactttattataaattaattacacaatttcaatgcattaattactactatataatttcattttttatatccttaacgaatgtcccgggg 38852233  T
Q  354 accggtaagcatttccc 370  Q
    |||||| ||||||||||    
T  38852232 accggttagcatttccc 38852216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 211 - 347
Target Start/End: Original strand, 50359210 - 50359347
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| |||| |||  |||||||||   ||||| ||||||||||||||||||||||  ||||||||| || |||||||| |||||||    
T  50359210 ggacactggttaagcataccatagaagataattattaccacaaaagaaaactgtttttgactttattatatattaattacccaatttcaatgcattaact 50359309  T
Q  310 actatataatttcctttttcatatcattaaccagtgcc 347  Q
    ||||||||||||  |||||| || | ||||||||||||    
T  50359310 actatataattttttttttcttaaccttaaccagtgcc 50359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 31514948 - 31514827
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| |||||||||  |||||||||| |||||||| |||||  ||| ||||||||| |||||||| ||||||||||||| ||| |||  |||||||||||    
T  31514948 actggttaagtatactataaaaggaaattattactataaaaa-aaattgtttttgattttattataaattaattacacaattttaatacattaactacta 31514850  T
Q  314 tataatttcctttttcatatcat 336  Q
    ||||||||  |||||||||||||    
T  31514849 tataattttatttttcatatcat 31514827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 353
Target Start/End: Complemental strand, 52718252 - 52718186
Alignment:
Q  287 tacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggag 353  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtgtccgggag 52718186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 2362953 - 2362880
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    |||||| ||||||||||||| |||||||| ||||||||||||  |||||||| |||||||| |||||||||||||    
T  2362953 taaaagaaaactgtttttgattttattatcaattaattacactatttcaatgcattaacta-tatataatttcct 2362880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 2391685 - 2391631
Alignment:
Q  294 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  2391685 tttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2391631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 348
Target Start/End: Complemental strand, 2393446 - 2393392
Alignment:
Q  294 tttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  2393446 tttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccc 2393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 297
Target Start/End: Complemental strand, 52552637 - 52552549
Alignment:
Q  209 ccggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttc 297  Q
    |||||||||| |||| |||| |||||||| ||||||||||  |||||| | |||||||||||||||||||| ||||||||||||| ||||    
T  52552637 ccggacactggttaaatataccataaaagagaattattaccataaaag-atactgtttttgactttattataaattaattacacaatttc 52552549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 21010146 - 21010041
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| |||| | |||||||| |||||||  ||||| |||||| ||||||||||| |||| ||||||||| ||| |||||||||  ||||||||||||||    
T  21010146 ttaaggatattaaaaaaggaagttattaccataaaaagaaact-tttttgacttt-ttataaattaattatacaatttcaatgt--taactactatataa 21010051  T
Q  319 tttccttttt 328  Q
    ||||||||||    
T  21010050 tttccttttt 21010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 328
Target Start/End: Complemental strand, 25743967 - 25743854
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacaca-ttttcaatgtattaactact 312  Q
    |||| ||||| ||| || |||||||| ||||||||  |||| ||||| | |||||||||| |||||||||||||||||| |||| |||| | ||| ||||    
T  25743967 actggttaagcataccaaaaaaggaaattattactaaaaaatgaaac-gattttgacttt-ttatgaattaattacacaatttttaatgcaataattact 25743870  T
Q  313 atataatttccttttt 328  Q
    ||||||||||||||||    
T  25743869 atataatttccttttt 25743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 370
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  312 tatataatttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttccc 370  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||| |||||| ||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 27644093 - 27644025
Alignment:
Q  281 attaattacaca-ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||| |||| |||||| ||| ||||||||||||| ||||||  || | |||||||||||||    
T  27644093 attaattacacaatttttaatgtaataattactatataatttactttttagtaactttaaccagtgccc 27644025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 40614526 - 40614474
Alignment:
Q  277 atgaattaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||| ||||||||| | ||||||||||||||||||| ||||    
T  40614526 atgaattagttacacaattttcaatgcaataactactatataatttccctttt 40614474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 8e-44; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 220 - 378
Target Start/End: Complemental strand, 12525872 - 12525711
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||||||||||||| |||||||||  ||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  12525872 ttaagcatatcataaaagggaattattaccataaaatgaaactgtgtttgacattattataaattaattacacattttcaatgtattaactactatataa 12525773  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttcccttttaatt 378  Q
    |||||||||||||| | ||||||||| ||| ||||  |||||| ||||||||||||| ||||    
T  12525772 tttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttccctttaaatt 12525711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 215 - 368
Target Start/End: Complemental strand, 2350810 - 2350654
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||||||||||||| |||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||  |||||||||||    
T  2350810 actggttaagcatatcataaaagggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatacattaactacta 2350711  T
Q  314 tataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttc 368  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||    
T  2350710 tataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 392255 - 392096
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  392255 cactggttaagcataccataaaagagaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 392156  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    |||||||||||||||||||| | |||||||||||||  |||  |||||| ||||||||||    
T  392155 atataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 23402291 - 23402136
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||| |||| |||||||| ||||| ||||||||||    
T  23402291 ttaagcataccataaaaggtaattattaccataaaaggaaactgtttttgactttattataaattaatttcacaatttcaatgcattaattactatataa 23402192  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccctt 372  Q
    |||||||||||||||| ||||||||||||| ||||  ||| || ||||||||||||    
T  23402191 tttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctt 23402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 3026033 - 3026196
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||||||||| ||| |||||||| ||||||||||  |||||| |||||||||||||| ||||||| ||||||||| ||| |||||||| |||||||    
T  3026033 ggacactgattaagcataccataaaagagaattattacgataaaagaaaactgtttttgacattattataaattaattatacaatttcaatgcattaact 3026132  T
Q  310 actatataatttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttcccttt 373  Q
    ||| ||||||||| ||||||||| | ||||||||||||||||  ||| || |||||||||||||    
T  3026133 actgtataatttcatttttcatacccttaaccagtgcccggggcaccagttagcatttcccttt 3026196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 237 - 373
Target Start/End: Complemental strand, 3515901 - 3515763
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||| | |    
T  3515901 ggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttcctttttcataccct 3515802  T
Q  337 taaccagtgccc--gggagaccggtaagcatttcccttt 373  Q
    ||||||||||||  |||  |||||| |||||||||||||    
T  3515801 taaccagtgccctgggggcaccggttagcatttcccttt 3515763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 230 - 348
Target Start/End: Original strand, 18276658 - 18276777
Alignment:
Q  230 cataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  18276658 cataaaaggaaattattaccataaaaggaaactgtttttgactttattataaattaattacacaaattcaatgcattaactactatataatttccttttt 18276757  T
Q  329 catatcattaaccagtgccc 348  Q
    |||||| |||||||||||||    
T  18276758 catatccttaaccagtgccc 18276777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 213 - 372
Target Start/End: Original strand, 1391204 - 1391365
Alignment:
Q  213 acactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||| ||||| ||| ||||||||| ||||||||   |||||| |||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  1391204 acactggttaagcataccataaaagggaattattatcataaaagaaaactgtttttgactttattataaattaattatacaatttcaatgcattaactac 1391303  T
Q  312 tatataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccctt 372  Q
    ||||||||||||||||||||||| |||| |||| ||| |||| |||||| ||||||||||||    
T  1391304 tatataatttcctttttcatatccttaatcagtaccccggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 250 - 372
Target Start/End: Complemental strand, 20898070 - 20897946
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc- 348  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  20898070 taaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccct 20897971  T
Q  349 -gggagaccggtaagcatttccctt 372  Q
     |||  |||||| ||||||||||||    
T  20897970 gggggcaccggttagcatttccctt 20897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 250 - 351
Target Start/End: Original strand, 34477614 - 34477715
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  34477614 taaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccg 34477713  T
Q  350 gg 351  Q
    ||    
T  34477714 gg 34477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 220 - 372
Target Start/End: Original strand, 7851192 - 7851347
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||| ||||||||||    
T  7851192 ttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaattttaatgcattaattactatataa 7851291  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    ||| |||||||||||| |||||||||||||  |||  |||||| ||||||||||||    
T  7851292 ttttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 237 - 370
Target Start/End: Original strand, 21878398 - 21878533
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||| ||||||||||||||||||||||| ||||||||| | | |||||||| |||||||||||||||||||||||||||||||| |    
T  21878398 ggaattattaccataaaaagaaactgtttttgactttattataaattaattaaataatttcaatgcattaactactatataatttcctttttcatatcct 21878497  T
Q  337 taaccagtgcccgggag--accggtaagcatttccc 370  Q
    ||||| |||||||||||  |||||| ||||||||||    
T  21878498 taacccgtgcccgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 237 - 348
Target Start/End: Original strand, 26467175 - 26467286
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  26467175 ggaattattaccataaaaggaaactatttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcct 26467274  T
Q  337 taaccagtgccc 348  Q
    ||||| ||||||    
T  26467275 taaccggtgccc 26467286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 214 - 373
Target Start/End: Original strand, 32929535 - 32929697
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| || |    
T  32929535 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaattaat 32929634  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttcccttt 373  Q
    |||||||||||||||||||| | ||||||| |||||  |||  |||||| |||||||||||||    
T  32929635 atataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttcccttt 32929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 214 - 346
Target Start/End: Original strand, 12145144 - 12145277
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| |||  |||||||||| ||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  12145144 cactggttaagcatactataaaaggaaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactact 12145243  T
Q  313 atataatttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||||||||| ||||| |||||    
T  12145244 atataatttcctttttcatatccttaacaagtgc 12145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 34851875 - 34852003
Alignment:
Q  213 acactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||| ||||| |||| ||||||| ||||||||||| |||||||||| | |||||||||||||||| ||| ||||||||| |||||||| |||||||||    
T  34851875 acactggttaagcatattataaaagagaattattactataaaaggaaattatttttgactttattataaatcaattacacaatttcaatgcattaactac 34851974  T
Q  312 tatataatttcctttttcatatcattaac 340  Q
    ||||||||||||||||||||||| |||||    
T  34851975 tatataatttcctttttcatatctttaac 34852003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 4215854 - 4215719
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||||| |||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||| |    
T  4215854 cactggttaagcataccataaaaggaaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactatt 4215755  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||||||||||||||   |||||||||||||    
T  4215754 atataatttcctttttcatactcttaaccagtgccc 4215719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 220 - 350
Target Start/End: Original strand, 29451148 - 29451279
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| ||||||||   |||||||||||||| |||||||||||||| | ||||||||||| |||||||| ||||||||||||||||    
T  29451148 ttaagcataccataaaagggaattattatcataaaaggaaactgtgtttgactttattataatttaattacacaatttcaatgcattaactactatataa 29451247  T
Q  319 tttcctttttcatatcattaaccagtgcccgg 350  Q
    |||||||||||||||| |||||| ||||||||    
T  29451248 tttcctttttcatatccttaaccggtgcccgg 29451279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 214 - 348
Target Start/End: Original strand, 32985220 - 32985355
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| ||||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  32985220 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 32985319  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||| ||||| ||||||| |||||    
T  32985320 atataatttccttttttatatccttaaccaatgccc 32985355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 220 - 344
Target Start/End: Complemental strand, 2581105 - 2580980
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  |||||||||| | |||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||    
T  2581105 ttaagcataccataaaagggaattattaccataaaaggaaattatttttgactttattataaattaattacataatttcaatgcattaactactatataa 2581006  T
Q  319 tttcctttttcatatcattaaccagt 344  Q
    |||||||||| |||||||||||||||    
T  2581005 tttccttttttatatcattaaccagt 2580980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 372
Target Start/End: Original strand, 34396596 - 34396715
Alignment:
Q  255 ggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc--ggga 352  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||  |||     
T  34396596 ggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctggggg 34396695  T
Q  353 gaccggtaagcatttccctt 372  Q
     |||||| ||||||||||||    
T  34396696 caccggttagcatttccctt 34396715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 35044048 - 35043917
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  35044048 cactggttaagcataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaat-acacaatttcaatgaattaactact 35043950  T
Q  313 atataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||| ||||||||||| ||||||||||    
T  35043949 atataatttcttttttcatatccttaaccagtg 35043917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 342
Target Start/End: Original strand, 25165446 - 25165569
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||||| |||||| |||||||||   |||||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  25165446 ttaagcatatcgtaaaagagaattattatcataaaagaaaactgtttttgactttattataaattaattacacaatttcaatatattaactactatataa 25165545  T
Q  319 tttcctttttcatatcattaacca 342  Q
    |||| ||||||||||| |||||||    
T  25165546 tttcttttttcatatccttaacca 25165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 27433627 - 27433491
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||| |||||||| |||| || ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |    
T  27433627 ggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcataccct 27433528  T
Q  337 taaccagtgccc--gggagaccggtaagcatttccct 371  Q
    ||||||||||||  |||  |||||| |||||||||||    
T  27433527 taaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 226 - 347
Target Start/End: Original strand, 11115136 - 11115256
Alignment:
Q  226 atatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    ||||||||||||| |||||||||  |||||| ||||| |||||||  ||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  11115136 atatcataaaagggaattattaccataaaagaaaactatttttga--ttattataaattaattacacaatttcaatgtattaactattatataatttcct 11115233  T
Q  325 ttttcatatcattaaccagtgcc 347  Q
    |||| ||||| ||||||||||||    
T  11115234 tttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 238 - 371
Target Start/End: Complemental strand, 31280455 - 31280320
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    ||||||||||| ||||||||||| ||||||||| ||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||    ||    
T  31280455 gaattattactataaaaggaaaccgtttttgacattattataaattaattatacaatttcaatgcattaactactatataatttcctttttcattctctt 31280356  T
Q  338 aaccagtgcc-cgggag-accggtaagcatttccct 371  Q
    || ||||||| |||||| |||||| |||||||||||    
T  31280355 aatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 209 - 348
Target Start/End: Original strand, 13416981 - 13417124
Alignment:
Q  209 ccggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatga---attaattacacattttcaatgtat 304  Q
    |||| ||||| ||||| |||| ||||||| ||||||||||  |||||| |||||||||||||||||||||| |   |||||||||||| |||||||  ||    
T  13416981 ccgggcactggttaagcatattataaaagagaattattaccataaaagaaaactgtttttgactttattattataaattaattacacaatttcaatacat 13417080  T
Q  305 taactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||    
T  13417081 taactaatatataatttcctttttcatatccttaactagtgccc 13417124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 23629640 - 23629738
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||| |||||||||||||||||| || |||||||||| |||||||  ||||||||||||||||||| |||||||||||| |||| ||||||||    
T  23629640 taaaaggaaattgtttttgactttattataaagtaattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgccc 23629738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 214 - 341
Target Start/End: Complemental strand, 28225379 - 28225252
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||| ||||    
T  28225379 cactgtttaaggataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattact 28225280  T
Q  313 atataatttcctttttcatatcattaacc 341  Q
    |||||| ||||||||||||||| ||||||    
T  28225279 atataa-ttcctttttcatatccttaacc 28225252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 220 - 370
Target Start/End: Complemental strand, 29978385 - 29978233
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||||||||||||| |||||||||  |||||  |||||||||||||||||||||| |||  |||||| | |||||||  ||||| ||||||||||    
T  29978385 ttaagcatatcataaaagggaattattaccataaaattaaactgtttttgactttattataaatatattacataatttcaatacattaaatactatataa 29978286  T
Q  319 tttcctttttcatatcattaaccagtgcccgg-gagaccggtaagcatttccc 370  Q
    |||||||||||||||| ||||| |||| |||| |  |||||| ||||||||||    
T  29978285 tttcctttttcatatccttaactagtgtccggaggcaccggttagcatttccc 29978233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 961162 - 961051
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| |||||||||   |||||||||| ||||| |||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  961162 ttaagcataccataaaagagaattattatcataaaaggaaattgtttctgactttattatcaattaattacacaattttaatgcattaactactatataa 961063  T
Q  319 tttcctttttca 330  Q
    ||||||||||||    
T  961062 tttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 226 - 351
Target Start/End: Original strand, 1840286 - 1840412
Alignment:
Q  226 atatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    ||||||||||||| |||||||||  | |||||||||||||||| |||||||||| ||||||||||||| ||| |||  ||||| || ||||||||||| |    
T  1840286 atatcataaaagggaattattaccatgaaaggaaactgtttttaactttattataaattaattacacaattttaatacattaattattatataatttctt 1840385  T
Q  325 ttttcatatcattaaccagtgcccggg 351  Q
    |||| ||||| ||||||||||| ||||    
T  1840386 tttttatatccttaaccagtgctcggg 1840412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 13529554 - 13529479
Alignment:
Q  273 tattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  13529554 tattataaattaattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccc 13529479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 9661144 - 9661018
Alignment:
Q  215 actgattaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||  |||| |||||| |||||||||||  ||||||||||||| |||| |||||||| | ||||||||| ||| |||||||| |||||||| ||    
T  9661144 actgattaaacatattataaaatggaattattaccataaaaggaaactgcttttaactttattttaaattaattatacaatttcaatgcattaactatta 9661045  T
Q  314 tataatttcctttttcatatcattaac 340  Q
    | ||||||| ||||||||||| |||||    
T  9661044 tgtaatttcttttttcatatccttaac 9661018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 237 - 346
Target Start/End: Complemental strand, 5323535 - 5323426
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||| |||||||||||||||||| ||||||||||| | ||| ||||  |||| |||||||||||||||||||| ||||  |    
T  5323535 ggaattattaccataaaaggaaattgtttttgactttattataaattaattacataattttaatgctttaattactatataatttccttttttatattct 5323436  T
Q  337 taaccagtgc 346  Q
    ||| ||||||    
T  5323435 taatcagtgc 5323426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 10431827 - 10431780
Alignment:
Q  281 attaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||||| |||||||||| |||||| ||||||||||| |||||    
T  10431827 attaattacacaatttcaatgtaataactattatataatttctttttt 10431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 11634028 - 11633970
Alignment:
Q  263 tttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataatt 320  Q
    |||||||| || ||||| |||||||||||| ||||||||| | ||||||||||||||||    
T  11634028 tttttgacatttttatgtattaattacacaattttcaatgcaataactactatataatt 11633970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 8e-44; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 214 - 370
Target Start/End: Original strand, 34650860 - 34651018
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  34650860 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactact 34650959  T
Q  313 atataatttcctttttcatatcattaaccagtgcccgggag-accggtaagcatttccc 370  Q
    |||||||||||||||||||| | |||||||||||||||| | |||||| ||||||||||    
T  34650960 atataatttcctttttcatacccttaaccagtgcccgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 220 - 373
Target Start/End: Complemental strand, 13661961 - 13661805
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  |||||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  13661961 ttaagcataccataaaagagaattattaccataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataa 13661862  T
Q  319 tttcctttttcatatcattaaccagtgc-ccgggag-accggtaagcatttcccttt 373  Q
    |||||||||||||||| ||||||||||| ||||| | |||||| |||||||||||||    
T  13661861 tttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttcccttt 13661805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 220 - 373
Target Start/End: Complemental strand, 35132674 - 35132519
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  |||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  35132674 ttaagcataccataaaagagaattattaccataaa-gaaaactgtttttgactttattataaattaattacacaatttcaatgtattaactactatataa 35132576  T
Q  319 tttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttcccttt 373  Q
    |||||||||||||||| |||||||||| |||||| | |||||| |||||||||||||    
T  35132575 tttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttcccttt 35132519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 250 - 372
Target Start/End: Original strand, 19647722 - 19647846
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||||||||||||| |||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  19647722 taaaaggaaactgtttatgactttattatcaattaattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 19647821  T
Q  350 ggag--accggtaagcatttccctt 372  Q
    ||||  |||||| ||||||| ||||    
T  19647822 ggagataccggttagcattttcctt 19647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 238 - 370
Target Start/End: Original strand, 21547446 - 21547579
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatt 337  Q
    |||||||||  |||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||    
T  21547446 gaattattaacttaaaatgaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttccttttttatatcctt 21547545  T
Q  338 aaccagtgccc-gggagaccggtaagcatttccc 370  Q
    ||||  ||||| |||| |||||| ||||||||||    
T  21547546 aaccgatgcccggggacaccggttagcatttccc 21547579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 237 - 370
Target Start/End: Original strand, 11958018 - 11958153
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||||||||||||||||| ||||| |    
T  11958018 ggaattattaccataaaaggaaactgtttttgactttattatcaattaattacacaatttcattgcattaactactatataatttccttttttatatctt 11958117  T
Q  337 taaccagtgccc--gggagaccggtaagcatttccc 370  Q
    ||||| ||||||  |||  |||||| ||||||||||    
T  11958118 taacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 209 - 370
Target Start/End: Original strand, 35504262 - 35504426
Alignment:
Q  209 ccggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    |||||||| | ||||| ||| ||||||||| ||||||| |  ||||||| ||||||||||||| ||||||| ||||||||||||| |||||||| |||||    
T  35504262 ccggacacgggttaagcataccataaaagggaattattgccataaaagggaactgtttttgacattattataaattaattacacaatttcaatgcattaa 35504361  T
Q  308 ctactatataatttcctttttcatatcattaaccagtg-cccgggag-accggtaagcatttccc 370  Q
    ||||||||||||||||||||||||| | |||||||||| |||||| | |||||| ||||||||||    
T  35504362 ctactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 230 - 332
Target Start/End: Complemental strand, 12506439 - 12506336
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12506439 cataaaagagaattattactataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataatttccttttt 12506340  T
Q  329 cata 332  Q
    ||||    
T  12506339 cata 12506336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 235 - 374
Target Start/End: Complemental strand, 13470288 - 13470147
Alignment:
Q  235 aaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatc 334  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||| |||||||||| |||||||||||||||||    
T  13470288 aaggtattattaccataaaaggaaactgtttttgactttattataaattaattatacaatttcaatgcattgactactatattatttcctttttcatatc 13470189  T
Q  335 attaaccagtgcccgggag--accggtaagcatttccctttt 374  Q
     |||||||||||||   ||  |||||| ||||||||||||||    
T  13470188 cttaaccagtgccccataggcaccggttagcatttccctttt 13470147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 8787492 - 8787337
Alignment:
Q  220 ttaagtatatcataaaa-ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||| ||||||||||   ||||||||||||||||||||  ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  8787492 ttaagcataccataaaatggaattattatcataaaaggaaactgtttttgatattattataaattaattacacaatttcaatgcattaactactatataa 8787393  T
Q  319 tttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||| ||||||||| | ||||||| |||||  |||| |||||| ||||||||||||    
T  8787392 tttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctt 8787337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 250 - 370
Target Start/End: Complemental strand, 10070090 - 10069969
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc- 348  Q
    ||||| ||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||     
T  10070090 taaaaagaaactgtttttgactttattatca-ttaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccc 10069992  T
Q  349 -gggagaccggtaagcatttccc 370  Q
     |||  |||||| ||||||||||    
T  10069991 gggggcaccggttagcatttccc 10069969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 10054400 - 10054540
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||| |||||||| ||||| || |||||||||||||||||||||    
T  10054400 aaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaattattatataatttcctttttcata 10054498  T
Q  333 tcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
     | |||||||||||||  |||  |||||| ||||||||||||    
T  10054499 cccttaaccagtgccccgggggcaccggttagcatttccctt 10054540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 233 - 370
Target Start/End: Complemental strand, 6283701 - 6283562
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||| ||||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||| ||||| || |||||||||| ||||||||||    
T  6283701 aaaatgaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaattattatataattttctttttcata 6283602  T
Q  333 tcattaaccagtgcccgggag--accggtaagcatttccc 370  Q
    || ||||| ||||||| ||||  |||||| ||||||||||    
T  6283601 tctttaactagtgccccggaggcaccggttagcatttccc 6283562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 371
Target Start/End: Original strand, 40564437 - 40564589
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||||||  |||||  ||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  40564437 ttaagcataccataaaagagaattattaccataaaaaaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 40564536  T
Q  319 tttcctttttcatatcattaaccagtgcccgggagaccggtaagcatttccct 371  Q
    |||||||||||| ||| |||| |  || || ||| |||||| |||||||||||    
T  40564537 tttcctttttcaaatccttaatcgatgtcccggacaccggttagcatttccct 40564589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 11846203 - 11846110
Alignment:
Q  241 ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatc 334  Q
    |||||||  ||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11846203 ttattaccataaaaggaaactacttttgactttattataaattaattacacaatttcaatgtattaactactatataatttccttttttatatc 11846110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 9721658 - 9721765
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    ||||||||||   |||||| |||||||||||||||||||||| ||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||  |    
T  9721658 ggaattattatcataaaagaaaactgtttttgactttattataaattaattaaacaatttcaatgcattaattactatataatttcctttttcatattct 9721757  T
Q  337 taaccagt 344  Q
    ||||||||    
T  9721758 taaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 220 - 345
Target Start/End: Complemental strand, 20175380 - 20175254
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| |||| |||||||| ||||||||   |||||| ||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  20175380 ttaagcatattataaaagggaattattatcataaaagaaaattgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 20175281  T
Q  319 tttcctttttcatatcattaaccagtg 345  Q
    |||| ||||| ||||  ||||||||||    
T  20175280 tttctttttttatatttttaaccagtg 20175254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 254 - 344
Target Start/End: Complemental strand, 31909749 - 31909659
Alignment:
Q  254 aggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 344  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||||| |||| ||||| |||||||||    
T  31909749 aggaaactgtttttgactttattataaatcaattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt 31909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 372
Target Start/End: Complemental strand, 4837369 - 4837256
Alignment:
Q  260 ctgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg-cccgggagaccgg 358  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||  |||||| ||| ||||||  |||||    
T  4837369 ctgtatttgactttattataaattaattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgccccggggcaccgg 4837270  T
Q  359 taagcatttccctt 372  Q
    | | ||||||||||    
T  4837269 ttaacatttccctt 4837256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 345
Target Start/End: Original strand, 39066978 - 39067095
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact-actatataatttcctttt 327  Q
    |||||||| ||||||||||  |||||||| | |||||||||||||||||| ||||||||||| | ||||||| |||||||| | ||||||||||| ||||    
T  39066978 cataaaagagaattattaccataaaaggatattgtttttgactttattataaattaattacataatttcaatatattaactaattatataatttcttttt 39067077  T
Q  328 tcatatcattaaccagtg 345  Q
    ||||||| ||||||||||    
T  39067078 tcatatccttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 228 - 348
Target Start/End: Complemental strand, 40057452 - 40057331
Alignment:
Q  228 atcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttt 326  Q
    ||||||||||| || ||||||| |||||| |||||| |||||| |||||||| ||||||||| ||  |||||||| | ||||||||||||||||||||||    
T  40057452 atcataaaagggaaatattactataaaagaaaactgcttttgattttattataaattaattatactatttcaatgcactaactactatataatttccttt 40057353  T
Q  327 ttcatatcattaaccagtgccc 348  Q
    |||||||| |||| | ||||||    
T  40057352 ttcatatccttaatcggtgccc 40057331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 215 - 327
Target Start/End: Complemental strand, 10956109 - 10955997
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||||||||||||||| |||||||  |||||||||| ||||||||||||| |||| ||||||||| ||| |||||||| ||||||||||     
T  10956109 actggttaagcatatcataaaaggaaattattaccataaaaggaaattgtttttgactttgttataaattaatta-acaatttcaatgcattaactactt 10956011  T
Q  314 tataatttcctttt 327  Q
    ||||||| ||||||    
T  10956010 tataattccctttt 10955997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 355
Target Start/End: Original strand, 2619635 - 2619726
Alignment:
Q  264 ttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccgggagac 355  Q
    |||| |||||||||| ||||||||||||| |||||||  ||||||||||| ||||||| |||||||||||| ||||| |||| || ||||||    
T  2619635 ttttaactttattataaattaattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtcccggagac 2619726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 226 - 372
Target Start/End: Complemental strand, 39069525 - 39069379
Alignment:
Q  226 atatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    |||||||||||| ||||||||||  |||||||||| ||||||| ||   ||||| |  |||||||||| ||| |||| |||||||||||||||||||||     
T  39069525 atatcataaaagagaattattaccataaaaggaaattgtttttcaca--attattatataattacacaattttaatgcattaactactatataatttcc- 39069429  T
Q  325 ttttcatatcattaaccagtgcccggga--gaccggtaagcatttccctt 372  Q
    |||||||| | ||||||||||||| |||   |||||| ||||||||||||    
T  39069428 ttttcatacccttaaccagtgccctggaagcaccggttagcatttccctt 39069379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 345
Target Start/End: Original strand, 19436908 - 19436995
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    ||||| ||||| ||||||| || ||||||||| ||| ||||||||  ||||| ||||||||||||||||||||||||| ||||| ||||    
T  19436908 aaactatttttaactttat-ataaattaattatacaatttcaatgctttaaccactatataatttcctttttcatatccttaacgagtg 19436995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 4268694 - 4268620
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactat 314  Q
    |||||||||  |||||||||||||||||| | ||| |||| ||||||||||||| ||| |||| ||||||||||||    
T  4268694 aattattaccataaaaggaaactgttttttatttt-ttataaattaattacacaattttaatgcattaactactat 4268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 6284892 - 6284822
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||| ||||||||| ||| |||||||  ||||| ||||||||||||||||||||  |||| ||||||||||    
T  6284892 ttataaattaattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 348
Target Start/End: Original strand, 6042136 - 6042210
Alignment:
Q  275 ttatgaattaattacaca-ttttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||| |||||||||||| ||||||||| | ||| |||||||||||||  |||||  |||| |||||||||||||    
T  6042136 ttatggattaattacacaattttcaatgcaataattactatataattttttttttagtatctttaaccagtgccc 6042210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 20719384 - 20719327
Alignment:
Q  264 ttttgactttattatgaattaattacaca-ttttcaatgtattaactactatataattt 321  Q
    |||||||||| |||||||||||||||||| |||| |||||| ||| |||||||||||||    
T  20719384 ttttgacttt-ttatgaattaattacacaatttttaatgtaataattactatataattt 20719327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 374
Target Start/End: Original strand, 21944939 - 21945051
Alignment:
Q  266 ttgactttattatgaattaattacaca-ttttcaatgtattaactactatataattt-cctttttcatatcattaaccagtgcccgggag--accggtaa 361  Q
    |||||||  ||||| |||||||| ||| |||| |||| | ||| || |||||||||| |||||||  |||| ||||||||||||| ||||  |||||| |    
T  21944939 ttgacttatttatggattaattaaacaatttttaatgcaataattaatatataattttcctttttattatccttaaccagtgccccggaggcaccggtta 21945038  T
Q  362 gcatttccctttt 374  Q
    |||||||||||||    
T  21945039 gcatttccctttt 21945051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 237 - 372
Target Start/End: Original strand, 24798454 - 24798590
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  24798454 ggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcct 24798553  T
Q  337 taaccagtgcccgggag-accggtaagcatttccctt 372  Q
     ||| |||||||||| | |||||| ||||||||||||    
T  24798554 caacaagtgcccgggggcaccggttagcatttccctt 24798590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 237 - 371
Target Start/End: Complemental strand, 47839627 - 47839492
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||| |    
T  47839627 ggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaactattatataaattcctttttcatatcct 47839528  T
Q  337 taaccagt-gcccgggagaccggtaagcatttccct 371  Q
    ||||||||  ||||||| |||||| |||||||||||    
T  47839527 taaccagtaccccgggacaccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 371
Target Start/End: Complemental strand, 5239438 - 5239284
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||| ||||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  5239438 ttaagcataccataaaagggaattattaccataaaaagaaactgtttttgacattattataaattaattacacaatttcaatgcattaactactatataa 5239339  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag--accggtaagcatttccct 371  Q
    |||||||||||||| ||||||||||||| | ||||  |||||| |||||||||||    
T  5239338 tttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 211 - 374
Target Start/End: Original strand, 29993511 - 29993677
Alignment:
Q  211 ggacactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||| ||||||||| |||||||||  |||||||||| || ||||||||||||||| ||||||||||||| |||||||| |||||||    
T  29993511 ggacactggttaagcataccataaaagggaattattaccataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaact 29993610  T
Q  310 actatataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttt 374  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||  ||| || ||||||||||||||    
T  29993611 actatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctttt 29993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 375
Target Start/End: Complemental strand, 4628725 - 4628561
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||| ||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||    
T  4628725 cactggttaagcataccataaaagggaattattaccataaaagtaaactgtttctgactttattataaattaattaaacaatttcaatgtattaactact 4628626  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccctttta 375  Q
    |||||||||||||||||||||| |||||| ||||||  |||  | |||| |||||||||||||||    
T  4628625 atataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccctttta 4628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 239 - 348
Target Start/End: Complemental strand, 30810788 - 30810679
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||    
T  30810788 aattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 30810689  T
Q  339 accagtgccc 348  Q
    ||||||||||    
T  30810688 accagtgccc 30810679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 353
Target Start/End: Complemental strand, 34606414 - 34606280
Alignment:
Q  220 ttaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||| |||||||||  ||||||||||||| ||||||||||||||| |||||||| |||| |||||||| ||||| ||||||||||    
T  34606414 ttaagcataccataaaaggtaattattaccataaaaggaaactgcttttgactttattataaattaatttcacaatttcaatgcattaattactatataa 34606315  T
Q  319 tttcctttttcatatcattaaccagtgcccgggag 353  Q
    |||||||||||||||| ||||||||||||| ||||    
T  34606314 tttcctttttcatatccttaaccagtgccccggag 34606280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 220 - 346
Target Start/End: Original strand, 8754618 - 8754745
Alignment:
Q  220 ttaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| ||||||||||| |||||||  |||||  |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  8754618 ttaagcataccataaaaggaaattattaccataaaacaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataa 8754717  T
Q  319 tttcctttttcatatcattaaccagtgc 346  Q
    |||| ||||||||||| |||||||||||    
T  8754718 tttcatttttcatatccttaaccagtgc 8754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 27456177 - 27456299
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||    
T  27456177 taaaaggaaactgcttttgactttattataaattaattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgcccg 27456276  T
Q  350 ggag-accggtaagcatttccct 371  Q
    || | ||| || |||||||||||    
T  27456277 ggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 233 - 372
Target Start/End: Complemental strand, 34333422 - 34333282
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||||||||||||||  ||||||||||||||||| ||| ||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  34333422 aaaaggaattattaccataaaaggaaactgtttt-gacattattataaattaattacacaatttcaatgcattaattactatataatttcctttttcata 34333324  T
Q  333 tcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
     | |||||||||||||  |||  |||||| ||||||||||||    
T  34333323 cccttaaccagtgccccgggggcaccggttagcatttccctt 34333282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 237 - 369
Target Start/End: Complemental strand, 28588044 - 28587911
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||| |||||||||||||||||||||||||||| |    
T  28588044 ggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattgactactatataatttcctttttcatatcct 28587945  T
Q  337 taaccagtgcccgggag-accggtaagcatttcc 369  Q
    ||||||||| ||||| | |||||| |||||||||    
T  28587944 taaccagtgtccgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 213 - 370
Target Start/End: Original strand, 43594062 - 43594222
Alignment:
Q  213 acactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||| ||||| ||| |||||||| |||||||||   ||| ||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||     
T  43594062 acactggttaagcataccataaaagagaattattatcataagaggaaactgtttttgactttattataaattaattatacaatttcaatgcattaactat 43594161  T
Q  312 tatataatttcctttttcatatcattaaccagtg--cccgggagaccggtaagcatttccc 370  Q
    ||||||||||||||||| ||||| ||||||||||  || |||| |||||| ||||||||||    
T  43594162 tatataatttccttttttatatccttaaccagtgttccggggacaccggttagcatttccc 43594222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 24438636 - 24438477
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||    
T  24438636 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgacattattataaattaattacataatttcaatgcattaactact 24438537  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    ||||| |||||||||||||| | ||||| |||||||  |||  |||||| ||||||||||    
T  24438536 atatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 226 - 341
Target Start/End: Complemental strand, 47083202 - 47083086
Alignment:
Q  226 atatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    ||||||||||||| |||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||  |||||||||||||||||||| |    
T  47083202 atatcataaaagggaattattaccataaaaggaaactgtttttaactttattatcaattaattacacaatttcaatacattaactactatataatttctt 47083103  T
Q  325 ttttcatatcattaacc 341  Q
    |||||||||| ||||||    
T  47083102 ttttcatatccttaacc 47083086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 230 - 372
Target Start/End: Original strand, 12218479 - 12218624
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||||||  |||||||||||| ||||| | |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  12218479 cataaaagagaattattaccataaaaggaaactattttttattttattataaattaattacacaatttcaatgcattaactactatataatttccttttt 12218578  T
Q  329 catatcattaaccagtgccc--gggagaccggtaagcatttccctt 372  Q
    |||||  ||| |||||||||  |||  |||||| ||||||||||||    
T  12218579 catatacttatccagtgccccgggggcaccggttagcatttccctt 12218624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 237 - 351
Target Start/End: Original strand, 42044344 - 42044458
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||| |||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| | |    
T  42044344 ggaattattaccataaaagaaaactgtttttgacattattataaattaattacacaatttcaatctattaactactatataatttcttttttcatacctt 42044443  T
Q  337 taaccagtgcccggg 351  Q
    ||||| |||||||||    
T  42044444 taaccggtgcccggg 42044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 525114 - 525234
Alignment:
Q  226 atatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    |||||||||||| ||||||||||  |||||||||||||||||||| |||||||| ||||||||| ||| |||||||| |||||||||| |||| ||| ||    
T  525114 atatcataaaagagaattattaccataaaaggaaactgtttttgattttattataaattaattatacaatttcaatgcattaactactgtatacttttct 525213  T
Q  325 ttttcatatcattaaccagtg 345  Q
    |||||||||| ||||||||||    
T  525214 ttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 345
Target Start/End: Original strand, 7689227 - 7689359
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||||||| |||||||| ||||||||||  |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||    
T  7689227 cactggttaagtataccataaaagagaattattaccataaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaattact 7689326  T
Q  313 atataatttcctttttcatatcattaaccagtg 345  Q
     || |||||||||||| ||||| |||| |||||    
T  7689327 gtaaaatttccttttttatatccttaatcagtg 7689359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 11686355 - 11686482
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaa--ctgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 316  Q
    ||||| |||||||||||| ||||||||||  |||||  |||  ||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  11686355 ttaagcatatcataaaagagaattattaccataaaaaaaaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatat 11686454  T
Q  317 aatttcctttttcatatcattaaccagt 344  Q
    |||||||||||| ||||| |||||||||    
T  11686455 aatttccttttttatatccttaaccagt 11686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 239 - 372
Target Start/End: Complemental strand, 18486094 - 18485959
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcatta 338  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||  ||||| |||||||||||||||||||  ||||| |||    
T  18486094 aattattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatacattaattactatataatttccttttcaatatcctta 18485995  T
Q  339 accagtgccc--gggagaccggtaagcatttccctt 372  Q
    ||||||||||  |||  |||||| ||||||||||||    
T  18485994 accagtgccccgggggcaccggttagcatttccctt 18485959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 47657137 - 47657004
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||||||||| ||| ||||||||| |||||||||  |||||  |||||| |||| |||||||||| ||||||||||||| |||||||| ||||| ||||    
T  47657137 cactgattaagcataccataaaagggaattattaccataaaa--aaactgcttttaactttattataaattaattacacaatttcaatgcattaattact 47657040  T
Q  313 atataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||| |||||||||||| |||||||||||||    
T  47657039 atataattttctttttcatatccttaaccagtgccc 47657004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 230 - 359
Target Start/End: Original strand, 23363210 - 23363341
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||| ||||||  |||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  23363210 cataaaagagaaatattaccataaaaggaaactgtttttaactttattataaattaattacacaatttcaatgcattaactactatacaatttccttttt 23363309  T
Q  329 catatcattaaccagtgc-ccgggagaccggt 359  Q
    | |||| ||||| ||||| |||||| ||||||    
T  23363310 cttatccttaacgagtgctccgggacaccggt 23363341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 34546378 - 34546469
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacc 341  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||    
T  34546378 taaaagtaaactgtttttgactttactataaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacc 34546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 214 - 348
Target Start/End: Complemental strand, 1737138 - 1737004
Alignment:
Q  214 cactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    ||||| ||||| ||| ||||||| |||||||||   |||| ||||| ||||||| |||||||||| ||||||||||||  |||||||| |||||||| ||    
T  1737138 cactggttaagcataccataaaatgaattattatcataaatggaaaatgtttttaactttattatcaattaattacactatttcaatgcattaactatta 1737039  T
Q  314 tataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||| ||||||||||| |||||||||||||    
T  1737038 tataatttcatttttcatatccttaaccagtgccc 1737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 214 - 343
Target Start/End: Complemental strand, 45045929 - 45045799
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| ||||||||   ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| ||||| ||||    
T  45045929 cactggttaagcataccataaaagggaattattatcataaaaggaaactgtttttgacattattataaattaattacacaatttcaatgcattaattact 45045830  T
Q  313 atataatttcctttttcatatcattaaccag 343  Q
    |||||||||| ||||||||| | ||||||||    
T  45045829 atataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 18117302 - 18117182
Alignment:
Q  214 cactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||| ||| |||||||| |||||  |||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  18117302 cactggttaagcataccataaaatgaaattattactataaaaaaaaactgtttttgactttattataaattaattacacaatttcaatacattaactact 18117203  T
Q  313 atataatttcctttttcatat 333  Q
    |||||||||||| ||||||||    
T  18117202 atataatttcctctttcatat 18117182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 214 - 342
Target Start/End: Original strand, 13064903 - 13065033
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttt-tgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||| |||||||||||| |||||||||||||  ||||||  ||||| ||     
T  13064903 cactggttaagcataccataaaagggaattattaccataaaaggaaactgttttttgactttattataaattaattacacaaattcaatacattaaatat 13065002  T
Q  312 tatataatttcctttttcatatcattaacca 342  Q
    ||||||||||||||||||||||| |||||||    
T  13065003 tatataatttcctttttcatatccttaacca 13065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 230 - 346
Target Start/End: Complemental strand, 5729489 - 5729372
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| ||||||||||| |||||| ||| | |||||||||||||||| |||||||||||   |||||||  |||||||| |||||||||||||||||    
T  5729489 cataaaagagaattattactataaaagaaaattatttttgactttattatcaattaattacattatttcaatacattaactattatataatttccttttt 5729390  T
Q  329 catatcattaaccagtgc 346  Q
    |||||| |||||||||||    
T  5729389 catatccttaaccagtgc 5729372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 233 - 367
Target Start/End: Complemental strand, 28262165 - 28262034
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | ||||||     ||||||||||||||||||||||||||||    
T  28262165 aaaaagaattattactataaaaggaaactgtttttgattttattatcaattaattacataatttcaa-----taactactatataatttcctttttcata 28262071  T
Q  333 tcattaaccagtgcccgggag--accggtaagcattt 367  Q
    || |||||| ||| || ||||  |||||| |||||||    
T  28262070 tccttaaccggtgacccggaggcaccggttagcattt 28262034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 37674168 - 37674240
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttc 322  Q
    |||||| |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||    
T  37674168 taaaagaaaactgtttttgactttattataaattaattacacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 348
Target Start/End: Original strand, 37631606 - 37631704
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||||||||||||||| |||||||| ||||||||||| | ||| |||| ||||| || ||||||||||||||||| ||||| |||||| ||||||    
T  37631606 taaaaggaaactgtttttgattttattataaattaattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgccc 37631704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 18469993 - 18470081
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||  ||||| | |||||||||||||||| | || ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18469993 aattattaccataaaatgtaactgtttttgacttt-tcataaattaattacacaatttcaatgtattaactgctatataatttccttttt 18470081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 237 - 342
Target Start/End: Complemental strand, 46716773 - 46716668
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    ||||||||||   |||||||||| | |||||||||||||||| ||||||||||| | ||||| || ||||| || ||||||||||||||||| ||||| |    
T  46716773 ggaattattatcataaaaggaaaatatttttgactttattataaattaattacataatttcagtgcattaagtattatataatttccttttttatatctt 46716674  T
Q  337 taacca 342  Q
    ||||||    
T  46716673 taacca 46716668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 33636611 - 33636491
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||  ||||||||||  |||||  ||||| ||||| |||||||||| ||||||||||||| |||||||| ||||| || |    
T  33636611 cactggttaagcataccataaaatagaattattaccataaaaataaactattttttactttattataaattaattacacaatttcaatgaattaattatt 33636512  T
Q  313 atataatttcctttttcatat 333  Q
    ||||||||| |||||||||||    
T  33636511 atataattttctttttcatat 33636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 352
Target Start/End: Complemental strand, 3022000 - 3021911
Alignment:
Q  262 gtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggga 352  Q
    |||| ||||||| |||| ||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||  |||||| || |||||||    
T  3022000 gtttatgacttt-ttataaattaattatacaatttcaatgtattaactagtatataatttcctttttaatatgcttaacccgtacccggga 3021911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 344
Target Start/End: Complemental strand, 36437498 - 36437405
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagt 344  Q
    |||||| ||||| ||||||||||| |||| ||||||||| ||| |||||||| |||| ||||||||||||| |||||||  |||| |||||||||    
T  36437498 taaaagaaaactatttttgacttt-ttataaattaattaaacaatttcaatgaattacctactatataattacctttttagtatccttaaccagt 36437405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 4100595 - 4100684
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 346  Q
    ||||||||||||| || ||||| ||||||| ||| | ||| |||  ||||| |||||||||||||||||||||||||| |||||| ||||    
T  4100595 aaactgtttttgatttgattataaattaataacataattttaatacattaattactatataatttcctttttcatatccttaaccggtgc 4100684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 22739957 - 22739868
Alignment:
Q  239 aattattactttaaaaggaaactgtttttgactttatt-atgaattaattacacattttcaatgtattaactactatataatttcctttt 327  Q
    |||||||||  |||||| ||||||||||| | ||| || || ||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  22739957 aattattaccataaaagaaaactgtttttaattttttttataaattaattacacaatttcaatgcattaactactatatactttcctttt 22739868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 340
Target Start/End: Original strand, 23357737 - 23357861
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| |||||||| ||| |||||||||   |||| ||||||||||||||||||| |||| ||||||||| ||   |  |||| ||||||||||    
T  23357737 cactggttaagcatatcatagaagagaattattatcataaatggaaactgtttttgacttttttataaattaattatac---tgaaatgcattaactact 23357833  T
Q  313 atataatttcctttttcatatcattaac 340  Q
    ||| ||||| |||||||||||| |||||    
T  23357834 atacaattttctttttcatatccttaac 23357861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 29835775 - 29835860
Alignment:
Q  257 aaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaacca 342  Q
    ||||||||||| |||||||||  |||||||||| || ||| |||  |||||||| ||||||| ||||||||||||||| |||||||    
T  29835775 aaactgtttttaactttattacaaattaattacgcaattttaatacattaactagtatataacttcctttttcatatctttaacca 29835860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 22973668 - 22973617
Alignment:
Q  302 tattaactactatataatttcctttttcatatcattaaccagtgcccgggag 353  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  22973668 tattaactactatataatttctttttttatatcattaaccagtgccccggag 22973617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 18220702 - 18220812
Alignment:
Q  218 gattaagtatatcataaaaggaatt-attactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatat 316  Q
    ||||||| ||| || |||||||||| |||||  |||||| ||||| |||||| | || |||| ||||||||||||| |||| ||  ||||| ||||||||    
T  18220702 gattaaggataccaaaaaaggaatttattaccataaaagaaaactatttttgccatt-ttataaattaattacacaatttctatacattaattactatat 18220800  T
Q  317 aatttccttttt 328  Q
    ||||||||||||    
T  18220801 aatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 297
Target Start/End: Original strand, 47118041 - 47118100
Alignment:
Q  238 gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttc 297  Q
    ||||||||||  ||||||||||||| | ||||||||||||| ||||||||||||| ||||    
T  47118041 gaattattaccataaaaggaaactgctcttgactttattataaattaattacacaatttc 47118100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 4087720 - 4087650
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||| ||||||| ||||  |||||||| ||||||||||||||||||||||||||  |||  ||||||||||    
T  4087720 ttataaattaatcacactatttcaatgcattaactactatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 41468726 - 41468774
Alignment:
Q  281 attaattacaca-ttttcaatgtattaactactatataatttccttttt 328  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  41468726 attaattacacaattttcaatgtaataattactatataatttccttttt 41468774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 18220625 - 18220696
Alignment:
Q  280 aattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccggg 351  Q
    ||||||||||||| |||||||  | ||| ||||||||||||||||||||  |||  |||||||| |||||||    
T  18220625 aattaattacacaatttcaatacagtaattactatataatttcctttttagtattcttaaccagcgcccggg 18220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 341
Target Start/End: Original strand, 18220479 - 18220593
Alignment:
Q  226 atatcataaaaggaatt-attactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcct 324  Q
    |||||| |||||||||| |||| | |||||| ||| ||||||||||  | |||| ||||||||||||| ||| |||  ||||| ||||||||||||| ||    
T  18220479 atatcaaaaaaggaatttattattataaaag-aaattgtttttgacaat-ttataaattaattacacaattttaatacattaattactatataattttct 18220576  T
Q  325 ttttcatatcattaacc 341  Q
    ||||  |||| ||||||    
T  18220577 ttttagtatccttaacc 18220593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 47118095 - 47118131
Alignment:
Q  317 aatttcctttttcatatcattaaccagtgcccgggag 353  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  47118095 aatttcctttttcatatctttaaccagtgccccggag 47118131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 230 - 372
Target Start/End: Complemental strand, 23104 - 22959
Alignment:
Q  230 cataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    |||||||| |||||||||   ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  23104 cataaaagagaattattaacataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgtattaattactatataatttccttttt 23005  T
Q  329 catatcattaaccagtgc-ccgggag-accggtaagcatttccctt 372  Q
    |||||| ||||||||||| ||||| | |||||| ||||||||||||    
T  23004 catatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 250 - 351
Target Start/End: Original strand, 7961 - 8062
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7961 taaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccg 8060  T
Q  350 gg 351  Q
    ||    
T  8061 gg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 250 - 351
Target Start/End: Complemental strand, 7410 - 7309
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7410 taaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcccg 7311  T
Q  350 gg 351  Q
    ||    
T  7310 gg 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 214 - 370
Target Start/End: Complemental strand, 15055 - 14896
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||| |||||| ||||| || ||||||||||    
T  15055 cactggttaagcataccataaaagggaattattaccataaaaggaaactgtttttgactttattataaattaactacacaatttcagtgcattaactact 14956  T
Q  313 atataatttcctttttcatatcattaaccagtgccc--gggagaccggtaagcatttccc 370  Q
    |||||||||| ||||| ||||| |||||||||||||  |||| |||||| ||||||||||    
T  14955 atataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 146933 - 147059
Alignment:
Q  215 actgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||| ||| ||||||| ||| |||||||  ||| || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  146933 actgattaagcataccataaaaagaaattattaccgtaatagaaaactgtttttgactttattatcaattaattacacaatttcaatgtattaactacta 147032  T
Q  314 tataatttcctttttcatatcattaac 340  Q
    ||||||||||||||||||||| |||||    
T  147033 tataatttcctttttcatatccttaac 147059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 984 - 851
Alignment:
Q  214 cactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| |||||||| ||||||||||| |||||||||| || ||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  984 cactggttaagcataccataaaagagaattattactataaaaggaaattgattttgactttattataaattaattacacaatttcaatgcattaactact 885  T
Q  313 atataatttcctttttcatatcattaaccagtgc 346  Q
    ||||||||| |||||||||||| ||||| |||||    
T  884 atataattttctttttcatatccttaactagtgc 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 350
Target Start/End: Complemental strand, 69384 - 69248
Alignment:
Q  214 cactgattaagtatatcataaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    ||||| ||||| ||| |||||||| ||||||||| ||||||  |||||| ||||||||||||||| ||||||||||| | ||| ||||||||||||||||    
T  69384 cactggttaagcataccataaaagaaattattaccttaaaaaaaaactgcttttgactttattataaattaattacataattttaatgtattaactacta 69285  T
Q  314 tataatttcctttttcatatcattaaccagtgcccgg 350  Q
    |||||||| |||||||||||| ||||| |||||||||    
T  69284 tataatttactttttcatatccttaacgagtgcccgg 69248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 33770 - 33841
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgc 346  Q
    |||| ||||||||||||| ||||||||||||||||| |||||||||||| |||| ||||  ||||| |||||    
T  33770 ttataaattaattacacaatttcaatgtattaactattatataatttccattttaatatacttaacaagtgc 33841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 240 - 376
Target Start/End: Original strand, 6164 - 6302
Alignment:
Q  240 attattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaa 339  Q
    ||||||||  ||||||||||||||||||||||||||||| | ||||||||||| || ||||| ||||||||||||||| |||||||||||||||| ||||    
T  6164 attattaccataaaaggaaactgtttttgactttattataatttaattacacaattccaatgcattaactactatatagtttcctttttcatatccttaa 6263  T
Q  340 ccagtgccc--gggagaccggtaagcatttcccttttaa 376  Q
    |||||||||  |||  |||||| ||||||||| ||||||    
T  6264 ccagtgccccaggggcaccggttagcatttcctttttaa 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 237 - 348
Target Start/End: Complemental strand, 116339 - 116228
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    ||||||||||   |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |    
T  116339 ggaattattatcataaaaggaaactgtttctgactttattatcaattaattacacaatttcaatgcattaactactatataatttcctttttcatatctt 116240  T
Q  337 taaccagtgccc 348  Q
    ||||| ||||||    
T  116239 taacctgtgccc 116228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 215 - 348
Target Start/End: Complemental strand, 450 - 316
Alignment:
Q  215 actgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||||||||  |||||||||||| ||||||||||  || |||||||||||||||||||||||||| |||| |||||||| |||||||| |||||||| ||    
T  450 actgattaatcatatcataaaagagaattattaccgtagaaggaaactgtttttgactttattataaatttattacacaatttcaatgcattaactatta 351  T
Q  314 tataatttcctttttcatatcattaaccagtgccc 348  Q
    |||||||| |||||||||||  |||||||||||||    
T  350 tataattttctttttcatatgcttaaccagtgccc 316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 220 - 346
Target Start/End: Complemental strand, 831 - 704
Alignment:
Q  220 ttaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataa 318  Q
    ||||| ||| |||||||| ||||||| ||  |||||| |||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  831 ttaagcataccataaaagagaattatcaccataaaagaaaacagtttttgactttattataaattaattacacaatttcaatggattaactactatataa 732  T
Q  319 tttcctttttcatatcattaaccagtgc 346  Q
    |||||||||||||||| |||||| ||||    
T  731 tttcctttttcatatctttaacccgtgc 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 215 - 348
Target Start/End: Original strand, 68318 - 68452
Alignment:
Q  215 actgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactacta 313  Q
    |||| ||||| ||| ||||||||| ||||||||| |||||||||||||| |||| |||||||||| | ||| ||||||| ||| |||| |||||||||||    
T  68318 actggttaagcataccataaaagggaattattaccttaaaaggaaactgattttaactttattataatttatttacacaattttaatgcattaactacta 68417  T
Q  314 tataatttcctttttcatatcattaaccagtgccc 348  Q
    ||||||||| ||||||||||| |||||||||||||    
T  68418 tataatttcatttttcatatccttaaccagtgccc 68452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 371
Target Start/End: Original strand, 11034 - 11155
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    ||||| |||||||||||||||||||||||   ||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||||||||| |||    
T  11034 taaaatgaaactgtttttgactttattatagtttaattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaaccagtgtccg 11133  T
Q  350 ggagaccggtaagcatttccct 371  Q
    ||  ||| || |||||||||||    
T  11134 gggcaccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 53736 - 53872
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||||||||| |||||||| |||| || ||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |    
T  53736 ggaattattaccataaaaggaaactatttttgacattatgataaattaattacacaattttaatgcattaactactatataatttcctttttcataccct 53835  T
Q  337 taaccagtgccc--gggagaccggtaagcatttccct 371  Q
    ||||||||||||  |||  |||||| |||||||||||    
T  53836 taaccagtgccccgggggcaccggttagcatttccct 53872  T

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Target: scaffold0113 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 333
Target Start/End: Complemental strand, 41081 - 40958
Alignment:
Q  211 ggacactgattaagtatatcataaaaggaa-ttattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||| ||||| ||||||||||||||| ||||||   ||||||||||||||||||||||| ||||| ||||||||||| | |||||||| |||||||    
T  41081 ggacactggttaagcatatcataaaaggaaattattatcataaaaggaaactgtttttgacttcattataaattaattacataatttcaatgcattaact 40982  T
Q  310 actatataatttcctttttcatat 333  Q
    | ||||||||||| ||||||||||    
T  40981 attatataatttcatttttcatat 40958  T

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Target: scaffold0325 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 233 - 376
Target Start/End: Original strand, 17518 - 17660
Alignment:
Q  233 aaaaggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcata 332  Q
    ||||||||||||||   |||||| |||||||||||||||||||||| |||||||| |||| |||||||| |||| |||||||||||||| ||||||||||    
T  17518 aaaaggaattattatcataaaagaaaactgtttttgactttattataaattaatt-cacaatttcaatgcattagctactatataattttctttttcata 17616  T
Q  333 tcattaaccagtgcc-cgggagaccggtaagcatttcccttttaa 376  Q
    ||  ||| ||||||| ||||| | |||| ||||||||||||||||    
T  17617 tccgtaaacagtgcctcgggaca-cggttagcatttcccttttaa 17660  T

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Target: scaffold0263 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 19609 - 19732
Alignment:
Q  211 ggacactgattaagtatatcataaaag-gaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaact 309  Q
    |||||||||||||  |||||||||||| ||| |||||   ||||||||||||||||||||||||||||| |||| |||||||| |||||||| ||||| |    
T  19609 ggacactgattaatcatatcataaaagagaactattatcgtaaaaggaaactgtttttgactttattataaattcattacacaatttcaatgcattaatt 19708  T
Q  310 actatataatttcctttttcatat 333  Q
    | ||||||||||| ||||||||||    
T  19709 attatataatttcttttttcatat 19732  T

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Target: scaffold0045 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 261 - 345
Target Start/End: Original strand, 53421 - 53505
Alignment:
Q  261 tgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtg 345  Q
    |||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  53421 tgtttttgactttattataaattaattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg 53505  T

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Target: scaffold0045; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 353
Target Start/End: Complemental strand, 50670 - 50567
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcattaaccagtgcccg 349  Q
    |||||| ||| || ||||||||||||||| ||||||||| ||| ||||||   |||||||||||||||||||||||||||||||| |||||||||||||     
T  50670 taaaagaaaattgattttgactttattataaattaattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtgcccc 50571  T
Q  350 ggag 353  Q
    ||||    
T  50570 ggag 50567  T

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Target: scaffold0038 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 214 - 341
Target Start/End: Complemental strand, 25877 - 25750
Alignment:
Q  214 cactgattaagtatatcataaaagg-aattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactact 312  Q
    ||||| ||||| ||| ||||||||| |||||||||  |||||| ||| |||||||||||||||||| ||||||||||||| |||||||  ||||| ||||    
T  25877 cactgtttaaggataccataaaagggaattattaccataaaagaaaattgtttttgactttattataaattaattacacaatttcaatacattaattact 25778  T
Q  313 atataatttcctttttcatatcattaacc 341  Q
    |||||| ||||||||||||||| ||||||    
T  25777 atataa-ttcctttttcatatccttaacc 25750  T

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Target: scaffold0425 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 311
Target Start/End: Complemental strand, 10845 - 10771
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactac 311  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  10845 ggaattattaccataaaaggaaactgtttttgactttattataaattaattacacaatttcaatgcattaactac 10771  T

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Target: scaffold0034 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 344
Target Start/End: Original strand, 95636 - 95742
Alignment:
Q  237 ggaattattactttaaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaactactatataatttcctttttcatatcat 336  Q
    |||||||||||  |||||| |||||||||| ||||||||||| ||||||||||| | |||||||  ||||| || ||||||||||||||||||||||  |    
T  95636 ggaattattaccataaaagaaaactgtttt-gactttattataaattaattacataatttcaattcattaattattatataatttcctttttcatattct 95734  T
Q  337 taaccagt 344  Q
    ||||||||    
T  95735 taaccagt 95742  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 233975 - 233918
Alignment:
Q  250 taaaaggaaactgtttttgactttattatgaattaattacacattttcaatgtattaa 307  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||    
T  233975 taaaaggaaactgcttttgactttattataaattaattacacaatttcaatgaattaa 233918  T

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Target: scaffold0533 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 321
Target Start/End: Complemental strand, 5136 - 5090
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataattt 321  Q
    |||| ||||||||||||| |||||||  |||||||||||||||||||    
T  5136 ttataaattaattacacaatttcaataaattaactactatataattt 5090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 14143 - 14196
Alignment:
Q  275 ttatgaattaattacacattttcaatgtattaactactatataatttccttttt 328  Q
    ||||| ||| |||||||| |||||||||| ||| ||||||| ||||||||||||    
T  14143 ttatggattgattacacaatttcaatgtaataaatactataaaatttccttttt 14196  T

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