View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3991_low_6 (Length: 481)

Name: NF3991_low_6
Description: NF3991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3991_low_6
NF3991_low_6
[»] chr2 (44 HSPs)
chr2 (22-468)||(37767606-37768052)
chr2 (238-296)||(22966787-22966845)
chr2 (238-296)||(15123948-15124006)
chr2 (238-293)||(25507256-25507311)
chr2 (238-296)||(24727602-24727660)
chr2 (238-296)||(40106610-40106668)
chr2 (238-296)||(13453967-13454025)
chr2 (238-292)||(31629605-31629659)
chr2 (238-296)||(40874273-40874331)
chr2 (238-274)||(13711062-13711098)
chr2 (238-293)||(45376236-45376291)
chr2 (238-296)||(9979097-9979155)
chr2 (238-296)||(18423773-18423831)
chr2 (232-282)||(31227576-31227626)
chr2 (238-296)||(37731212-37731270)
chr2 (238-296)||(43820753-43820811)
chr2 (241-282)||(32900350-32900391)
chr2 (236-275)||(26321730-26321769)
chr2 (236-275)||(26321898-26321937)
chr2 (238-296)||(44977512-44977571)
chr2 (238-296)||(7258574-7258632)
chr2 (238-276)||(13553148-13553186)
chr2 (238-276)||(24766153-24766191)
chr2 (238-276)||(29168726-29168764)
chr2 (238-296)||(35334521-35334579)
chr2 (238-275)||(4738605-4738642)
chr2 (238-275)||(23690543-23690580)
chr2 (238-295)||(28544032-28544089)
chr2 (238-275)||(30856808-30856845)
chr2 (238-275)||(32749999-32750036)
chr2 (238-275)||(33296104-33296141)
chr2 (238-275)||(34442114-34442151)
chr2 (238-275)||(36435682-36435719)
chr2 (238-275)||(39247496-39247533)
chr2 (240-273)||(40602425-40602458)
chr2 (238-275)||(44189828-44189865)
chr2 (238-274)||(8482255-8482291)
chr2 (238-270)||(12600049-12600081)
chr2 (235-291)||(14876704-14876760)
chr2 (238-274)||(19695714-19695750)
chr2 (238-278)||(22303204-22303244)
chr2 (238-282)||(39234206-39234250)
chr2 (238-274)||(39285854-39285890)
chr2 (238-274)||(42081049-42081085)
[»] chr8 (42 HSPs)
chr8 (238-296)||(30170741-30170799)
chr8 (238-296)||(43066606-43066664)
chr8 (238-296)||(26629122-26629180)
chr8 (241-296)||(37379446-37379501)
chr8 (243-296)||(14127250-14127303)
chr8 (240-276)||(3547192-3547228)
chr8 (236-274)||(895933-895971)
chr8 (238-296)||(2730973-2731031)
chr8 (238-296)||(21526293-21526351)
chr8 (236-274)||(32020488-32020526)
chr8 (238-296)||(33605090-33605148)
chr8 (238-296)||(34435749-34435807)
chr8 (238-283)||(3155844-3155889)
chr8 (238-275)||(5740807-5740844)
chr8 (238-275)||(40842015-40842052)
chr8 (238-274)||(7678733-7678769)
chr8 (238-274)||(9047093-9047129)
chr8 (240-296)||(39031224-39031280)
chr8 (237-296)||(44061717-44061776)
chr8 (238-296)||(1068607-1068665)
chr8 (238-276)||(5849598-5849636)
chr8 (238-292)||(8835886-8835940)
chr8 (238-296)||(34018809-34018867)
chr8 (245-282)||(15116977-15117014)
chr8 (238-275)||(28927682-28927719)
chr8 (238-275)||(32725813-32725850)
chr8 (238-275)||(33107900-33107937)
chr8 (238-275)||(39021476-39021513)
chr8 (238-275)||(40102024-40102061)
chr8 (238-275)||(42716321-42716358)
chr8 (238-275)||(45101397-45101434)
chr8 (238-283)||(45108682-45108727)
chr8 (238-278)||(1158365-1158405)
chr8 (238-274)||(1796497-1796533)
chr8 (238-274)||(5502372-5502408)
chr8 (238-282)||(5771998-5772042)
chr8 (232-296)||(10592293-10592357)
chr8 (238-274)||(12732843-12732879)
chr8 (238-282)||(13592767-13592811)
chr8 (238-274)||(18538387-18538423)
chr8 (238-274)||(35500987-35501023)
chr8 (238-274)||(37392151-37392187)
[»] chr4 (41 HSPs)
chr4 (238-296)||(56215606-56215664)
chr4 (237-296)||(17367445-17367504)
chr4 (235-296)||(32871841-32871902)
chr4 (241-296)||(54222069-54222124)
chr4 (238-283)||(10762527-10762572)
chr4 (238-282)||(35206169-35206213)
chr4 (238-282)||(50831782-50831826)
chr4 (238-296)||(16531956-16532014)
chr4 (238-296)||(35748676-35748734)
chr4 (238-275)||(31240649-31240686)
chr4 (238-275)||(51318704-51318741)
chr4 (238-275)||(54800999-54801036)
chr4 (238-274)||(42490921-42490957)
chr4 (238-273)||(1031756-1031791)
chr4 (234-265)||(35908413-35908444)
chr4 (238-296)||(961277-961335)
chr4 (238-296)||(5932776-5932834)
chr4 (240-278)||(19899313-19899351)
chr4 (238-276)||(20632680-20632718)
chr4 (238-276)||(29227275-29227313)
chr4 (238-292)||(29963609-29963663)
chr4 (238-296)||(50506394-50506452)
chr4 (238-275)||(4896533-4896570)
chr4 (238-275)||(11064122-11064159)
chr4 (238-275)||(23220336-23220373)
chr4 (238-275)||(26885292-26885329)
chr4 (238-275)||(30973598-30973635)
chr4 (238-275)||(34116573-34116610)
chr4 (238-275)||(35332707-35332744)
chr4 (238-275)||(36444428-36444465)
chr4 (238-275)||(44925163-44925200)
chr4 (238-275)||(46794534-46794571)
chr4 (238-279)||(52372221-52372262)
chr4 (238-274)||(5234494-5234530)
chr4 (238-274)||(11997686-11997722)
chr4 (238-278)||(24088594-24088634)
chr4 (238-274)||(37547066-37547102)
chr4 (238-274)||(41119504-41119540)
chr4 (238-274)||(42915253-42915289)
chr4 (238-274)||(46173551-46173587)
chr4 (240-276)||(53190929-53190965)
[»] chr5 (33 HSPs)
chr5 (238-296)||(15004736-15004794)
chr5 (238-293)||(8728596-8728651)
chr5 (238-296)||(30838377-30838435)
chr5 (238-296)||(41621940-41621998)
chr5 (238-293)||(2629819-2629874)
chr5 (238-279)||(43057436-43057477)
chr5 (238-284)||(844037-844083)
chr5 (240-276)||(8097252-8097288)
chr5 (238-293)||(15022257-15022312)
chr5 (238-277)||(28811430-28811469)
chr5 (238-276)||(4719651-4719689)
chr5 (238-296)||(7144578-7144635)
chr5 (238-296)||(8675445-8675503)
chr5 (238-276)||(17097834-17097872)
chr5 (238-276)||(19844341-19844379)
chr5 (238-296)||(26754650-26754708)
chr5 (238-284)||(34270542-34270588)
chr5 (238-296)||(35098745-35098802)
chr5 (238-279)||(14780450-14780491)
chr5 (238-275)||(19376165-19376202)
chr5 (238-275)||(34381013-34381050)
chr5 (238-275)||(36581498-36581535)
chr5 (238-275)||(39595273-39595310)
chr5 (238-282)||(4800528-4800572)
chr5 (238-274)||(6865810-6865846)
chr5 (238-282)||(8681844-8681888)
chr5 (240-276)||(11464154-11464190)
chr5 (239-275)||(12910786-12910822)
chr5 (238-274)||(13734383-13734419)
chr5 (238-274)||(14206401-14206437)
chr5 (238-274)||(31683518-31683554)
chr5 (238-274)||(35814454-35814490)
chr5 (240-296)||(38097782-38097838)
[»] chr3 (36 HSPs)
chr3 (238-296)||(19623264-19623322)
chr3 (238-292)||(31143271-31143325)
chr3 (238-296)||(9326997-9327055)
chr3 (238-296)||(41442173-41442231)
chr3 (238-296)||(41448188-41448246)
chr3 (238-276)||(43499593-43499631)
chr3 (238-275)||(9027874-9027911)
chr3 (239-296)||(41850945-41851002)
chr3 (236-296)||(3282532-3282592)
chr3 (238-274)||(32457789-32457825)
chr3 (238-282)||(38017953-38017997)
chr3 (238-274)||(46952950-46952986)
chr3 (240-282)||(11323912-11323954)
chr3 (238-296)||(27198173-27198230)
chr3 (238-276)||(43409394-43409432)
chr3 (238-296)||(48405411-48405469)
chr3 (238-296)||(50559224-50559282)
chr3 (238-275)||(1901959-1901996)
chr3 (238-275)||(1911405-1911442)
chr3 (238-267)||(9719482-9719511)
chr3 (238-275)||(14957837-14957874)
chr3 (238-275)||(18169158-18169195)
chr3 (238-275)||(22813073-22813110)
chr3 (238-275)||(26279885-26279922)
chr3 (238-275)||(28300681-28300718)
chr3 (238-275)||(31176473-31176510)
chr3 (238-275)||(36799399-36799436)
chr3 (238-275)||(36869870-36869907)
chr3 (238-275)||(46315988-46316025)
chr3 (231-264)||(48490546-48490579)
chr3 (238-267)||(49457566-49457595)
chr3 (238-275)||(51464305-51464342)
chr3 (240-296)||(16139308-16139363)
chr3 (238-270)||(32687987-32688019)
chr3 (238-282)||(39284693-39284737)
chr3 (238-282)||(39901592-39901636)
[»] chr7 (41 HSPs)
chr7 (238-296)||(8352775-8352833)
chr7 (238-282)||(48395249-48395293)
chr7 (238-296)||(6892645-6892703)
chr7 (238-282)||(5068649-5068693)
chr7 (238-282)||(10700212-10700256)
chr7 (238-296)||(6427211-6427269)
chr7 (242-296)||(22588973-22589027)
chr7 (238-296)||(48314373-48314431)
chr7 (238-296)||(49069250-49069308)
chr7 (238-275)||(28109958-28109995)
chr7 (235-276)||(37173006-37173047)
chr7 (240-276)||(38259066-38259102)
chr7 (238-270)||(43025810-43025842)
chr7 (241-292)||(7714809-7714860)
chr7 (234-293)||(17909065-17909124)
chr7 (241-296)||(47925341-47925396)
chr7 (238-296)||(2008870-2008928)
chr7 (238-296)||(22692085-22692142)
chr7 (238-276)||(23910283-23910321)
chr7 (238-296)||(24680981-24681039)
chr7 (238-276)||(25614853-25614891)
chr7 (238-276)||(29763831-29763869)
chr7 (234-276)||(37325851-37325893)
chr7 (238-276)||(43079664-43079702)
chr7 (238-279)||(2849550-2849591)
chr7 (238-275)||(17500698-17500735)
chr7 (238-275)||(17552479-17552516)
chr7 (238-275)||(28824504-28824541)
chr7 (237-282)||(30818023-30818068)
chr7 (238-275)||(37392044-37392081)
chr7 (238-275)||(38023457-38023494)
chr7 (238-274)||(2469704-2469740)
chr7 (238-282)||(7212693-7212737)
chr7 (238-274)||(8459615-8459651)
chr7 (238-278)||(12141900-12141940)
chr7 (238-274)||(22330654-22330690)
chr7 (232-276)||(22623383-22623427)
chr7 (239-275)||(28596908-28596944)
chr7 (238-274)||(31785494-31785530)
chr7 (238-274)||(37352013-37352049)
chr7 (238-274)||(43444636-43444672)
[»] chr1 (37 HSPs)
chr1 (238-296)||(1523306-1523364)
chr1 (240-279)||(40434009-40434048)
chr1 (238-276)||(45333357-45333395)
chr1 (237-296)||(1922437-1922496)
chr1 (238-296)||(32821636-32821693)
chr1 (238-296)||(35883619-35883677)
chr1 (238-296)||(40809498-40809555)
chr1 (237-274)||(51571415-51571452)
chr1 (238-274)||(2362357-2362393)
chr1 (238-274)||(45272183-45272219)
chr1 (238-277)||(49425739-49425778)
chr1 (238-296)||(4213073-4213131)
chr1 (238-276)||(27352631-27352669)
chr1 (238-296)||(27742618-27742676)
chr1 (238-296)||(29706715-29706773)
chr1 (241-283)||(41619060-41619102)
chr1 (238-276)||(42843376-42843414)
chr1 (238-296)||(47642619-47642677)
chr1 (238-296)||(48858824-48858882)
chr1 (238-296)||(48872380-48872437)
chr1 (238-275)||(366658-366695)
chr1 (238-275)||(23554752-23554789)
chr1 (238-275)||(45740577-45740614)
chr1 (238-275)||(50226912-50226949)
chr1 (238-274)||(14983785-14983821)
chr1 (240-276)||(18639736-18639772)
chr1 (236-276)||(26839381-26839421)
chr1 (238-274)||(29264016-29264052)
chr1 (238-274)||(29489393-29489429)
chr1 (238-274)||(33675901-33675937)
chr1 (238-282)||(33694227-33694271)
chr1 (238-270)||(35335530-35335562)
chr1 (238-274)||(37843466-37843502)
chr1 (240-276)||(48261142-48261178)
chr1 (238-274)||(48872051-48872087)
chr1 (238-274)||(49453492-49453528)
chr1 (240-296)||(51231318-51231374)
[»] scaffold1625 (1 HSPs)
scaffold1625 (241-296)||(793-848)
[»] chr6 (18 HSPs)
chr6 (240-282)||(13093629-13093671)
chr6 (240-296)||(20029264-20029320)
chr6 (238-282)||(31883330-31883374)
chr6 (238-296)||(31204822-31204880)
chr6 (239-296)||(38598-38655)
chr6 (238-275)||(31517202-31517239)
chr6 (238-270)||(32253781-32253813)
chr6 (241-296)||(10840722-10840777)
chr6 (238-296)||(17551391-17551449)
chr6 (238-296)||(33712321-33712379)
chr6 (238-275)||(2241840-2241877)
chr6 (229-290)||(6256427-6256487)
chr6 (238-275)||(6435037-6435074)
chr6 (238-275)||(8173345-8173382)
chr6 (238-275)||(29383558-29383595)
chr6 (238-275)||(32457285-32457322)
chr6 (238-274)||(1196059-1196095)
chr6 (238-274)||(1897698-1897734)
[»] scaffold0110 (1 HSPs)
scaffold0110 (238-296)||(28339-28397)
[»] scaffold0514 (1 HSPs)
scaffold0514 (238-296)||(1858-1915)
[»] scaffold0011 (2 HSPs)
scaffold0011 (238-276)||(18596-18634)
scaffold0011 (238-275)||(219697-219734)
[»] scaffold0154 (1 HSPs)
scaffold0154 (238-275)||(4316-4353)
[»] scaffold0131 (1 HSPs)
scaffold0131 (238-275)||(15567-15604)
[»] scaffold0026 (1 HSPs)
scaffold0026 (238-275)||(113626-113663)
[»] scaffold0003 (2 HSPs)
scaffold0003 (238-275)||(88809-88846)
scaffold0003 (238-278)||(337119-337159)
[»] scaffold0194 (1 HSPs)
scaffold0194 (238-274)||(29795-29831)
[»] scaffold0086 (1 HSPs)
scaffold0086 (238-282)||(15857-15901)
[»] scaffold0054 (1 HSPs)
scaffold0054 (238-274)||(31623-31659)


Alignment Details
Target: chr2 (Bit Score: 394; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 22 - 468
Target Start/End: Complemental strand, 37768052 - 37767606
Alignment:
Q  22 caaggtaatttaatttggttgtgagagtgagtgaggcttctaaaagatgactaaaggcggaataggcaaagagaactttgggggtacccgtgaaggacag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37768052 caaggtaatttaatttggttgtgagagtgagtgaggcttctaaaagatgactaaaggcggaataggcaaagagaactttgggggtacccgtgaaggacag 37767953  T
Q  122 gtaagtactggtgatatggatgtcattttgcaattaaatctattaactagggatgattcttacctatcataagcacaaatccaaatcattcgaacccatg 221  Q
    | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37767952 gcaagtactggtgatatggatgtcattttgcaattaaatctaataactagggatgattcttacctatcataagcacaaatccaaatcattcgaacccatg 37767853  T
Q  222 atctttattaagttaaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcatagataattgaatcctctcgcaacaac 321  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37767852 atctttattaagttagagaaatgatatttatacaaccactttttgacaacttttgaaacaatcatctctctcatagacaattgaatcctctcgcaacaac 37767753  T
Q  322 aaaaatagataattgcagtatcacatactttattcatgtattagttaagattttaggtataataaatagttaatttaatcatgttctctnnnnnnnttat 421  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       ||||    
T  37767752 aaaaatagataattgcagtatcacatactttattcatgtattaattaagattttaggtataataaatagttaatttaatcatgttctctaaaaaagttat 37767653  T
Q  422 taatttaaccatgttatttgacttatttctccctctagctgatgatg 468  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  37767652 taatttaaccatgttattcgacttatttctccctctagctgatgatg 37767606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 22966787 - 22966845
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  22966787 agaaatgatatttgtacaaccactttttgataacttttgaaacaaccctctctctcata 22966845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 15124006 - 15123948
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  15124006 agaaatgatatttgtacaaccattttttgacaacttttgaaacaatcatatctctcata 15123948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 25507256 - 25507311
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  25507256 agaaatgatatttgtacaaccactttttgacaacttttgaaacaaccctctctctc 25507311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 24727660 - 24727602
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||    
T  24727660 agaaatgatatttgtacaaccactttttgacaacttttgaaacaacactctctctcata 24727602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 40106610 - 40106668
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  40106610 agaaatgatatttgtacaaccactctttgacaacttatgaaacaaccatctctctcata 40106668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 13454025 - 13453967
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||  |||||||||||    
T  13454025 agaaatgatatctgtacaatcactttttgacaacttttgaaacaattctctctctcata 13453967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 31629605 - 31629659
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctct 292  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||    
T  31629605 agaaatgatatttgtacaactactttttgacaacttttggaacaaccatctctct 31629659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 40874331 - 40874273
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| ||| |||||||||    
T  40874331 agaaatgatatttgtacaaccattttttaacaacttttgaaacaaccatgtctctcata 40874273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 13711062 - 13711098
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||||||||||    
T  13711062 agaaatgatatttgtacaaccactttttgataacttt 13711098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 45376291 - 45376236
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| | ||||||||    
T  45376291 agaaatgatatttgtacaaccactttttgacaacttttgtgacaaccctctctctc 45376236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 9979097 - 9979155
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||| | || |||||  |||| |||||||||||||    
T  9979097 agaaatgatatttgtacaaccactttttcacaatttttgtgacaaccatctctctcata 9979155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 18423831 - 18423773
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||| | | ||||||||| ||||| ||||||||||| ||||||||    
T  18423831 agaaatgatatttgtacatctattttttgatatcttttaaaacaatcatcactctcata 18423773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 31227626 - 31227576
Alignment:
Q  232 agttaaagaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||||||||    
T  31227626 agttagagaaatgatatgtgtacaatcactttttgacaacttttgaaacaa 31227576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 37731270 - 37731212
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||    
T  37731270 agaaatgatatttgaacaaccactttttgacaacttttgtgacaattttctctctcata 37731212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 43820811 - 43820753
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||| || ||||| | |||||||||||||| ||||| |||||||    
T  43820811 agaaatgatatttgtacaatcatttttttacaacttttgaaacaaccatctttctcata 43820753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 32900391 - 32900350
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  32900391 aatgatatttgtacaaccactttgtaataacttttgaaacaa 32900350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 26321769 - 26321730
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  26321769 aaagaaatgatatttgtacaaccattttgtgataactttt 26321730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 26321937 - 26321898
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  26321937 aaagaaatgatatttgtacaaccattttgtgataactttt 26321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 44977571 - 44977512
Alignment:
Q  238 agaaatgatatttgtacaacca-ctttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||| |||||||| |||||||| |||||||| ||||||  |||||||||||    
T  44977571 agaaatgatatttatacaaccatctttttgacaacttttgtaacaattttctctctcata 44977512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 7258632 - 7258574
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||| |||||||||| |||| ||||| |||||||| ||||||  |||||||||||    
T  7258632 agaaatgacatttgtacaatcactctttgacaacttttgtaacaattttctctctcata 7258574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 13553148 - 13553186
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  13553148 agaaatgatatttgtacaaccactttgtgataatttttg 13553186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 24766153 - 24766191
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  24766153 agaaatgatatttgtacaaccattttttaataacttttg 24766191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 29168726 - 29168764
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  29168726 agaaatgatatttgtacaaccattttttgacaacttttg 29168764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 35334521 - 35334579
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||| | |||||||||| ||||||  | |||||||||    
T  35334521 agaaatgatatttgtacaaccattttataataacttttgtaacaattctttctctcata 35334579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 4738642 - 4738605
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  4738642 agaaatgatatttgtacaaccactttgtgacaactttt 4738605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 23690580 - 23690543
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  23690580 agaaatgatattagtacaaccactttttgacaactttt 23690543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 28544032 - 28544089
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcat 295  Q
    ||||||||||||||||| |||| ||||| | ||||||||  |||| ||||||||||||    
T  28544032 agaaatgatatttgtactaccattttttcacaacttttgtgacaaccatctctctcat 28544089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 30856808 - 30856845
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  30856808 agaaatgatatttgtacaaccactttgtgacaactttt 30856845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 32749999 - 32750036
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||| | |||||||    
T  32749999 agaaatgatatttgtacaaccactttttcacaactttt 32750036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 33296141 - 33296104
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  33296141 agaaatgatatttgtacaaccactttgtgacaactttt 33296104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 34442114 - 34442151
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  34442114 agaaatgatatttgtacaaccactttatgataattttt 34442151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 36435682 - 36435719
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  36435682 agaaatgatatttgtacaaccactttgtgacaactttt 36435719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 39247533 - 39247496
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  39247533 agaaatgatatttgtacaaccattttgtgataactttt 39247496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 40602458 - 40602425
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataactt 273  Q
    |||||||||||||||||||||||||||| |||||    
T  40602458 aaatgatatttgtacaaccactttttgacaactt 40602425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 44189828 - 44189865
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  44189828 agaaatgatatttgtacaaccactttatgacaactttt 44189865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 8482291 - 8482255
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  8482291 agaaatgatatttgtacaaccactttatgacaacttt 8482255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 12600049 - 12600081
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataa 270  Q
    |||||||||||||||||||||||||| ||||||    
T  12600049 agaaatgatatttgtacaaccactttgtgataa 12600081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 14876704 - 14876760
Alignment:
Q  235 taaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctc 291  Q
    ||||||||||||||||||||||||| ||| | | || |||||||||||  |||||||    
T  14876704 taaagaaatgatatttgtacaaccattttcttacaatttttgaaacaactatctctc 14876760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 19695750 - 19695714
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  19695750 agaaatgatatttgtacaatcactttttgacaacttt 19695714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 22303204 - 22303244
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  22303204 agaaatgatatttgtacaactattttttgacaacttttgaa 22303244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 39234250 - 39234206
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||||    
T  39234250 agaaacgatatttgaacaaccattttttgataacttttgcaacaa 39234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 39285854 - 39285890
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  39285854 agaaatgatatttgtacaatcactttttgacaacttt 39285890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 42081049 - 42081085
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  42081049 agaaatgatatttgtacagccactttttgacaacttt 42081085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 30170799 - 30170741
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  30170799 agaaatgatatttgtacaaccactttttgacaacttttgaaacaaccatctctctcata 30170741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 43066664 - 43066606
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  43066664 agaaatgatatttgtacaaccactttttaacaacttttgaaacaatcatctctctcata 43066606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 26629180 - 26629122
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||    
T  26629180 agaaatgatatttgtacaaccactttttgacaacttttgaaacaaccctctctctcata 26629122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 37379501 - 37379446
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  37379501 aatgatatttgtagaaccactttttgacaacttttgaaacaaccatctctctcata 37379446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 14127250 - 14127303
Alignment:
Q  243 tgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||||||||| || ||||| ||||| |||||||||||||    
T  14127250 tgatatttgtacaaccactttttgacaatttttggaacaaccatctctctcata 14127303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 3547228 - 3547192
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||||||||||||||    
T  3547228 aaatgatatttgtacaaccactttttgataacttttg 3547192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 895933 - 895971
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  895933 aaagaaatgatatttgtacaaccactttttgacaacttt 895971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 2731031 - 2730973
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||   |||||||||||    
T  2731031 agaaatgatatttgaacaaccactttttgacaacttttgtaacaactttctctctcata 2730973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 21526351 - 21526293
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||| | |||||||| |||| |  |||||||||||    
T  21526351 agaaatgatatttgtacaaccactttttaacaacttttgtaacagttttctctctcata 21526293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 32020526 - 32020488
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32020526 aaagaaatgatatttgtacaaccattttttgataacttt 32020488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 33605148 - 33605090
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| ||| |||||||||||| ||||||  |||||||||||    
T  33605148 agaaatgatatttgaacaaccattttatgataacttttggaacaattttctctctcata 33605090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 34435807 - 34435749
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||    
T  34435807 agaaatgatatttgaacaaccactttttgacaacttttgtgacaattttctctctcata 34435749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 283
Target Start/End: Original strand, 3155844 - 3155889
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaat 283  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||    
T  3155844 agaaatgatatttgtacaaccactttttaacaacttttggaacaat 3155889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 5740844 - 5740807
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||||| |||||||    
T  5740844 agaaatgatatttgtacaaccactttttgacaactttt 5740807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 40842015 - 40842052
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||||||||    
T  40842015 agaaatgatatttgtacaaccactttgtgataactttt 40842052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 7678733 - 7678769
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||| ||||||    
T  7678733 agaaatgatatttgtacaaccactttttgacaacttt 7678769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 9047129 - 9047093
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||| ||||||    
T  9047129 agaaatgatatttgtacaaccactttttgacaacttt 9047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 39031280 - 39031224
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||  | ||||| |||||||||||||||||  |||||||||||    
T  39031280 aaatgatatttgtacaattatttttttataacttttgaaacaattttctctctcata 39031224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 44061717 - 44061776
Alignment:
Q  237 aagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||| ||||||| ||||||||||||||||  ||||   |||||||||||    
T  44061717 aagaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcata 44061776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 1068607 - 1068665
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  1068607 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 1068665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 5849636 - 5849598
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  5849636 agaaatgatatttgaacaaccattttttgataacttttg 5849598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 8835940 - 8835886
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctct 292  Q
    ||||||||||||||||| | |||||||||| ||||||| |||||| | |||||||    
T  8835940 agaaatgatatttgtacgatcactttttgacaacttttaaaacaaccctctctct 8835886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 34018809 - 34018867
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| ||| ||| |||||||| ||||||  |||||||||||    
T  34018809 agaaatgatatttgaacaaccattttctgacaacttttgcaacaattttctctctcata 34018867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 282
Target Start/End: Complemental strand, 15117014 - 15116977
Alignment:
Q  245 atatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  15117014 atatttgtacaaccactttttaacaacttttgaaacaa 15116977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 28927682 - 28927719
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  28927682 agaaatgatatttgtacaaccactttgtgacaactttt 28927719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 32725850 - 32725813
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  32725850 agaaatgatatttgtacaaccactttgtgataattttt 32725813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 33107937 - 33107900
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  33107937 agaaatgatatttgaacaaccactttttgacaactttt 33107900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 39021513 - 39021476
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  39021513 agaaatgatatttgtacaaccattttgtgataactttt 39021476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 40102024 - 40102061
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||| | |||||||    
T  40102024 agaaatgatatttgtacaaccactttttcacaactttt 40102061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 42716321 - 42716358
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  42716321 agaaatgatatttgtacaaccactttttcataattttt 42716358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 45101397 - 45101434
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  45101397 agaaatgatatttgtacaaccactttgtgacaactttt 45101434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 45108727 - 45108682
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaat 283  Q
    |||||||||||||||||| | | ||||||| |||||||||||||||    
T  45108727 agaaatgatatttgtacatctattttttgacaacttttgaaacaat 45108682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 1158405 - 1158365
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||||||||||||||||||| ||| | ||||||||||||    
T  1158405 agaaatgatatttgtacaaccaatttctaataacttttgaa 1158365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 1796497 - 1796533
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  1796497 agaaatgatatttgtacaaccactttgtgacaacttt 1796533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 5502372 - 5502408
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  5502372 agaaatgatatttgtacaaccactttgtgacaacttt 5502408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 5772042 - 5771998
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||    
T  5772042 agaaatgatatttgaacaaccattttttgacaacttttgtaacaa 5771998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 10592357 - 10592293
Alignment:
Q  232 agttaaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||| | ||||| || ||||||||||||||||  ||||   |||||||||||    
T  10592357 agttaaagaaatgatatctttacaatcattttttgataacttttgtgacaactttctctctcata 10592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 12732843 - 12732879
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12732843 agaaatgatatttgtacaaccactttgtgacaacttt 12732879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 13592767 - 13592811
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||| | | ||||||| ||||||||||||||    
T  13592767 agaaatgatatttgtacacctattttttgacaacttttgaaacaa 13592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 18538387 - 18538423
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  18538387 agaaatgatacttgtacaaccactttttgacaacttt 18538423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 35501023 - 35500987
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  35501023 agaaatgatatttatacaaccactttttgacaacttt 35500987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 37392187 - 37392151
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  37392187 agaaatgatatttgtacaaccattttttgacaacttt 37392151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 56215606 - 56215664
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  56215606 agaaatgatatttgtacaaccactttttgacaacttttgaaccaatcatctctctcata 56215664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 296
Target Start/End: Original strand, 17367445 - 17367504
Alignment:
Q  237 aagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  17367445 aagaaatgatatttatacaaccactttttgacaacttttgaaacaaccatctctctcata 17367504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 32871902 - 32871841
Alignment:
Q  235 taaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||| || | || |||| ||||||||||||||||||||||||||||    
T  32871902 taaagaaatgatatttgtaccactatttcttgacaacttttgaaacaatcatctctctcata 32871841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 54222124 - 54222069
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||    
T  54222124 aatgatatttgtacaaccactttttaacaacttttggaacaatcatgtctctcata 54222069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 10762572 - 10762527
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaat 283  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  10762572 agaaatgatatttatacaactactttttgataacttttgaaacaat 10762527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 35206169 - 35206213
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  35206169 agaaatgatgtttgtacaatcactttttgataacttttgaaacaa 35206213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 50831826 - 50831782
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  50831826 agaaatgatatttgtacaaccactttttgacaacttttgtaacaa 50831782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 16532014 - 16531956
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||| ||||||||||||||  ||||||||| ||||||||| |||| |||||||||||    
T  16532014 agaaattatatttgtacaacccttttttgatatcttttgaaataatcttctctctcata 16531956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 35748734 - 35748676
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||| |||||| ||||| |||||||||||| ||||| ||||||||| |||||||||    
T  35748734 agaaatgttatttgcacaactactttttgataatttttggaacaatcatatctctcata 35748676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 31240649 - 31240686
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||||||||    
T  31240649 agaaatgatatttgtacaaccactttgtgataactttt 31240686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 51318704 - 51318741
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||||||||    
T  51318704 agaaatgatatttgtacaaccactttgtgataactttt 51318741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 54800999 - 54801036
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||||||||    
T  54800999 agaaatgatatttgtacaaccactttgtgataactttt 54801036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 42490921 - 42490957
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||| ||||||    
T  42490921 agaaatgatatttgtacaaccactttttgacaacttt 42490957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 1031756 - 1031791
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactt 273  Q
    |||||||||||||||||||||||||| |||||||||    
T  1031756 agaaatgatatttgtacaaccactttgtgataactt 1031791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 265
Target Start/End: Original strand, 35908413 - 35908444
Alignment:
Q  234 ttaaagaaatgatatttgtacaaccacttttt 265  Q
    ||||||||||||||||||||||||||||||||    
T  35908413 ttaaagaaatgatatttgtacaaccacttttt 35908444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 961277 - 961335
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||| ||||||||||||  | ||||||||||||||||||||||   |||||||||||    
T  961277 agaaataatatttgtacaataattttttgataacttttgaaacaactctctctctcata 961335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 5932834 - 5932776
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  5932834 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 5932776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 19899313 - 19899351
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  19899313 aaatgatatttgtacaaccactttttaacaacttttgaa 19899351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 20632718 - 20632680
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  20632718 agaaatgatatttatacaaccattttttgataacttttg 20632680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 29227313 - 29227275
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  29227313 agaaatgatatttgaacaaccactttttgataatttttg 29227275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 29963609 - 29963663
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctct 292  Q
    ||||| ||||||| ||||   ||||||||| ||||||||||||||||||||||||    
T  29963609 agaaacgatatttatacatatactttttgacaacttttgaaacaatcatctctct 29963663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 50506394 - 50506452
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| |||||||||| |||||| | |||  |||||||||||    
T  50506394 agaaatgatatttgaacaaccattttttgataatttttgagataattttctctctcata 50506452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 4896570 - 4896533
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  4896570 agaaatgatatttgtacaaccactttgtgacaactttt 4896533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 11064159 - 11064122
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  11064159 agaaatgatatttgtacaaccactttgtgacaactttt 11064122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 23220336 - 23220373
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  23220336 agaaatgatatttgtacaaccattttttgacaactttt 23220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 26885292 - 26885329
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  26885292 agaaatgatatttgtacaaccactttgtgacaactttt 26885329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 30973598 - 30973635
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  30973598 agaaatgatatttgtacaaccactttatgacaactttt 30973635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 34116610 - 34116573
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  34116610 agaaatgatatttgtacaaccactttgtgacaactttt 34116573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 35332707 - 35332744
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  35332707 agaaatgatatttgtacaaccactttatgataattttt 35332744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 36444465 - 36444428
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  36444465 agaaatgatatttgtacaaccattttatgataactttt 36444428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 44925200 - 44925163
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  44925200 agaaatgatatttgaacaaccactttttgacaactttt 44925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 46794571 - 46794534
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  46794571 agaaatgatatttgtacaaccactttctgacaactttt 46794534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 52372262 - 52372221
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaa 279  Q
    |||||||||||||||||||  | |||||||||||||||||||    
T  52372262 agaaatgatatttgtacaattaatttttgataacttttgaaa 52372221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 5234530 - 5234494
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  5234530 agaaatgatatttgtacaatcactttgtgataacttt 5234494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 11997686 - 11997722
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  11997686 agaaatgatatttgtacaaccactttgtgacaacttt 11997722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 24088634 - 24088594
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  24088634 agaaatgatatttgtacaaccattttatgacaacttttgaa 24088594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 37547066 - 37547102
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  37547066 agaaatgatatttgtacaaccactttgtgacaacttt 37547102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 41119540 - 41119504
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  41119540 agaaatgatatttgtacaaccactttgtgacaacttt 41119504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 42915289 - 42915253
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  42915289 agaaatgatatttgtacaatcactttttgacaacttt 42915253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 46173551 - 46173587
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  46173551 agaaatgatatttgtacaaccactttgtgacaacttt 46173587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 53190929 - 53190965
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| | ||||||||    
T  53190929 aaatgatatttgtacaaccactttttaacaacttttg 53190965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 15004794 - 15004736
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  15004794 agaaatgatatttggacaaccactttttgacaatttttgaaacaatcatctctctcata 15004736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 8728651 - 8728596
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  8728651 agaaatgatatttgtacaaccactttttgacaacttttgaaacaaccctctctctc 8728596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 30838435 - 30838377
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||    
T  30838435 agaaatgatatttgtacatctactttttgacaacttttgaaacaaccatctctctcata 30838377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 41621998 - 41621940
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||    
T  41621998 agaaatgatatttgtacaaccactttttgacaacttttgaaacaaccacatctctcata 41621940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 2629819 - 2629874
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| | ||||||||    
T  2629819 agaaatgatatttgtacaaccattttttgacaacttttgaaacaaccttctctctc 2629874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 43057436 - 43057477
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaa 279  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  43057436 agaaatgatatttgtacaaccactttttgacaacttttgaaa 43057477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 844037 - 844083
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatc 284  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  844037 agaaatgatatttgcacaaccattttttgacaacttttgaaacaatc 844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 8097252 - 8097288
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||| ||||||||||||||||    
T  8097252 aaatgatatttgtacaaccaatttttgataacttttg 8097288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 15022312 - 15022257
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||| ||||||| | ||||||||||||| |||||||||||||||| ||| ||||    
T  15022312 agaaataatatttggaaaaccactttttgacaacttttgaaacaatcctctttctc 15022257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 28811430 - 28811469
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttga 277  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  28811430 agaaatgatatttgtacaaccactttgtgacaacttttga 28811469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 4719651 - 4719689
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  4719651 agaaatgatatttgtacaaccaatttttgacaacttttg 4719689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 7144578 - 7144635
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||   |||||||||||    
T  7144578 agaaatgatatttgtacaaccattttatgataactttt-aaacaactttctctctcata 7144635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 8675503 - 8675445
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||| ||| ||| |||||||||||| ||||||  |||||||||||    
T  8675503 agaaatgatatttgaacatccattttgtgataacttttgcaacaattttctctctcata 8675445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 17097872 - 17097834
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  17097872 agaaatgatatttgaacaaccattttttgataacttttg 17097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 19844379 - 19844341
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  19844379 agaaatgatatttgtacaactattttttgataacttttg 19844341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 26754708 - 26754650
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||||||  |||||| |||||| || |||| | |||||||||||    
T  26754708 agaaatgatatttgtacaaccaaattttgacaactttggagacaaccctctctctcata 26754650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 34270588 - 34270542
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatc 284  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  34270588 agaaatgatatttgtacaacaaatttttaacaacttttgaaacaatc 34270542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 35098802 - 35098745
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||  | |||||||||    
T  35098802 agaaatgatatttgtacaaccattttttgataacattt-aaacaattttttctctcata 35098745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 14780491 - 14780450
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaa 279  Q
    |||||||||||||||||| | ||||||||| |||||||||||    
T  14780491 agaaatgatatttgtacatctactttttgacaacttttgaaa 14780450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 19376202 - 19376165
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  19376202 agaaatgatatttgtacaaccactttctgacaactttt 19376165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 34381013 - 34381050
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  34381013 agaaatgatatttgtacaaccactttgtgacaactttt 34381050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 36581535 - 36581498
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  36581535 agaaatgatatttgtacaaccactttgtgataattttt 36581498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 39595273 - 39595310
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  39595273 agaaatgatatttgtacaaccactttgtgacaactttt 39595310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 4800572 - 4800528
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||| |||||| ||||||||| |||||||| |||||    
T  4800572 agaaatgatatttatacaactactttttgacaacttttggaacaa 4800528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 6865846 - 6865810
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  6865846 agaaatgatatttgtacaaccactttgtgacaacttt 6865810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 8681844 - 8681888
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||| || |||||||||| ||||| |||||    
T  8681844 agaaatgatatttgtacaatcattttttgataatttttggaacaa 8681888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 11464190 - 11464154
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  11464190 aaatgatatttgtacaaccaatttgtgataacttttg 11464154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 12910786 - 12910822
Alignment:
Q  239 gaaatgatatttgtacaaccactttttgataactttt 275  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  12910786 gaaatgatatttgtacaaccactttgtgacaactttt 12910822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 13734419 - 13734383
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  13734419 agaaatgatatttgtacaaccactttatgacaacttt 13734383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 14206401 - 14206437
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  14206401 agaaatgatatttgtacaaccattttttgacaacttt 14206437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 31683554 - 31683518
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  31683554 agaaatgacatttgaacaaccactttttgataacttt 31683518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 35814454 - 35814490
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  35814454 agaaatgatatttgtacaaccattttgtgataacttt 35814490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 38097782 - 38097838
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||| |||||||  | ||||| | ||||||||||||||| ||||||||||||    
T  38097782 aaatgatatctgtacaattattttttaacaacttttgaaacaattatctctctcata 38097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 19623322 - 19623264
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  19623322 agaaatgatatttgtacaatcactttttgataacttttaaaacaataatctctctcata 19623264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 31143271 - 31143325
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctct 292  Q
    |||| |||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  31143271 agaagtgatatttgtacaatcattttttgacaacttttgaaacaatcatctctct 31143325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 9327055 - 9326997
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||| || |||| || |||||||||||||| ||||| |||||||    
T  9327055 agaaatgatatttgtacaatcaattttcgacaacttttgaaacaaccatctatctcata 9326997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 41442173 - 41442231
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||| | |||||||||||    
T  41442173 agaaatggtatttgtacaaccattttttgataacttttacaacaaccttctctctcata 41442231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 41448246 - 41448188
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||||  | |||||||||||||| | |||||||||||    
T  41448246 agaaatgatatttgtacaaccatttttaaacaacttttgaaacaaccctctctctcata 41448188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 43499631 - 43499593
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  43499631 agaaatgatatttgtacaaccactttatgataacttttg 43499593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 9027874 - 9027911
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||||||||    
T  9027874 agaaatgatatttgtacaaccactttgtgataactttt 9027911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 41850945 - 41851002
Alignment:
Q  239 gaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||  |||||| |||||||||||||| | || ||||||||    
T  41850945 gaaatgatatttgtacaaccatattttgacaacttttgaaacaaccctccctctcata 41851002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 3282532 - 3282592
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||| ||  | ||||||| ||||||||||||||| |||| |||||||    
T  3282532 aaagaaatgatatttgtataagtattttttgacaacttttgaaacaattatctttctcata 3282592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 32457825 - 32457789
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32457825 agaaatgatatttgtacaaccactttttgacaacttt 32457789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 38017997 - 38017953
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||    
T  38017997 agaaatgatatttgtacaaccactctttgacaacttatgaaacaa 38017953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 46952950 - 46952986
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46952950 agaaatgatatttgtacaaccattttttgataacttt 46952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 11323912 - 11323954
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||||| | ||||||||| ||||    
T  11323912 aaatgatatttgtacaaccactttttaacaacttttgatacaa 11323954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 27198230 - 27198173
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||  | |||||||||    
T  27198230 agaaatgatatttgtacaatcattttttgataactttt-aaacaattttatctctcata 27198173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 43409432 - 43409394
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  43409432 agaaatgatatttgtacaaccactttgtgataatttttg 43409394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 48405411 - 48405469
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||   |||||||||||    
T  48405411 agaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttctctctcata 48405469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 50559282 - 50559224
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||| | ||||||| ||||||||  |||||  |||||||||||    
T  50559282 agaaatgatatttgtacaactattttttgacaacttttgtgacaattttctctctcata 50559224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 1901996 - 1901959
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  1901996 agaaatgatatttgtacaaccactttgtgacaactttt 1901959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 1911442 - 1911405
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  1911442 agaaatgatatttgtacaaccactttgtgacaactttt 1911405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 267
Target Start/End: Complemental strand, 9719511 - 9719482
Alignment:
Q  238 agaaatgatatttgtacaaccactttttga 267  Q
    ||||||||||||||||||||||||||||||    
T  9719511 agaaatgatatttgtacaaccactttttga 9719482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 14957837 - 14957874
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  14957837 agaaatgatatttgtacaaccactttgtgacaactttt 14957874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 18169158 - 18169195
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  18169158 agaaatgatatttgtacaaccactttgtgacaactttt 18169195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 22813073 - 22813110
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  22813073 agaaatgatatttgtacaaccactttctgacaactttt 22813110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 26279885 - 26279922
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  26279885 agaaatgatatttgtacaaccactttctgacaactttt 26279922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 28300718 - 28300681
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  28300718 agaaatgatatttgtacaaccactttatgacaactttt 28300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 31176510 - 31176473
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  31176510 agaaatgatatttgtacaaccactttgtgataattttt 31176473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 36799399 - 36799436
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||| | |||||||||||||||    
T  36799399 agaaatgatatttgtacaactattttttgataactttt 36799436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 36869907 - 36869870
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  36869907 agaaatgatatttgtacaaccattttttgacaactttt 36869870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 46316025 - 46315988
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  46316025 agaaatgatatttgtacaaccactttatgacaactttt 46315988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 48490579 - 48490546
Alignment:
Q  231 aagttaaagaaatgatatttgtacaaccactttt 264  Q
    |||||| |||||||||||||||||||||||||||    
T  48490579 aagttagagaaatgatatttgtacaaccactttt 48490546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 267
Target Start/End: Original strand, 49457566 - 49457595
Alignment:
Q  238 agaaatgatatttgtacaaccactttttga 267  Q
    ||||||||||||||||||||||||||||||    
T  49457566 agaaatgatatttgtacaaccactttttga 49457595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 51464342 - 51464305
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  51464342 agaaatgatatttgtacaaccactttgtgacaactttt 51464305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 16139363 - 16139308
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||| ||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  16139363 aaataatatttgtacaaccattttatgataacttttg-aacaattttctctctcata 16139308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 32688019 - 32687987
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataa 270  Q
    ||||||||||||||||||||||| |||||||||    
T  32688019 agaaatgatatttgtacaaccaccttttgataa 32687987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 39284737 - 39284693
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||    
T  39284737 agaaatgatatttgtatattcactttttgacaacttttgaaacaa 39284693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 39901592 - 39901636
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||| || |||||||||| ||||| |||||    
T  39901592 agaaatgatatttgtacaatcattttttgataatttttggaacaa 39901636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 8352775 - 8352833
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||||    
T  8352775 agaaatgatatttatacaaccactttttgacaatttttgaaacaaccatctctctcata 8352833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 48395249 - 48395293
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  48395249 agaaatgatatttgtacaaccactttttgacaacttttgaaacaa 48395293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 6892703 - 6892645
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||| ||||| ||||| |||||||| | |||||||||||    
T  6892703 agaaatgatatttgtacaaccactctttgacaacttatgaaacaaccctctctctcata 6892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 5068693 - 5068649
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  5068693 agaaatgatatttgtacaaccattttatgataacttttgaaacaa 5068649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 10700256 - 10700212
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  10700256 agaaatgatatttgcacaaccactttttgataacttttgtaacaa 10700212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 6427211 - 6427269
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||| |||||||||||||||| |||||||  ||||| | |||||||||||    
T  6427211 agaaatgatatttatacaaccactttttgacaacttttagaacaaccctctctctcata 6427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 22589027 - 22588973
Alignment:
Q  242 atgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||| ||||||| |||||||||||||| |  ||||||||||    
T  22589027 atgatatttgtacaaccattttttgacaacttttgaaacaaccccctctctcata 22588973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 48314431 - 48314373
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||| | |||||||  ||||| | |||||||||||    
T  48314431 agaaatgatatttgtacaaccactttttaacaacttttacaacaaccctctctctcata 48314373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 49069250 - 49069308
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||| ||||||||  | |||  |||||||||||    
T  49069250 agaaatgatatttgtacaaccactttttgacaacttttgtgataattttctctctcata 49069308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 28109958 - 28109995
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||||| |||||||    
T  28109958 agaaatgatatttgtacaaccactttttgacaactttt 28109995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 37173047 - 37173006
Alignment:
Q  235 taaagaaatgatatttgtacaaccactttttgataacttttg 276  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  37173047 taaagaaatgatatttgtacaaccaatttgtgataacttttg 37173006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 38259066 - 38259102
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38259066 aaatgatatttgtacaaccattttttgataacttttg 38259102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 43025810 - 43025842
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataa 270  Q
    |||||||||||||||||||||||||||||||||    
T  43025810 agaaatgatatttgtacaaccactttttgataa 43025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 7714860 - 7714809
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctct 292  Q
    ||||||||||||||||||||||||||| || ||||| ||||||  |||||||    
T  7714860 aatgatatttgtacaaccactttttgacaatttttggaacaattctctctct 7714809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 17909124 - 17909065
Alignment:
Q  234 ttaaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctc 293  Q
    |||||||||| |||||||||||| || ||||||| ||||||||||| || | ||||||||    
T  17909124 ttaaagaaataatatttgtacaatcattttttgacaacttttgaaataaccctctctctc 17909065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 47925341 - 47925396
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||||||| ||| | |||||||| ||||| | |||||||||||    
T  47925341 aatgatatttgtacaaccactctttaacaacttttggaacaaccctctctctcata 47925396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 2008928 - 2008870
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  2008928 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 2008870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 22692085 - 22692142
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||| ||| ||||||| |||||||  |||||||||||    
T  22692085 agaaatgatatttgtacaaccattttatgacaactttt-aaacaattttctctctcata 22692142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 23910321 - 23910283
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  23910321 agaaatgatatttgtacaaccattttttgacaacttttg 23910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 24681039 - 24680981
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||| ||||| ||| | ||||||||||  |||||| |||||||||||    
T  24681039 agaaatgatatttgtataaccattttcttataacttttgggacaatcctctctctcata 24680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 25614891 - 25614853
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  25614891 agaaatgatatttgtacatccattttttgataacttttg 25614853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 29763831 - 29763869
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  29763831 agaaatgatatttgtacaaccattttgtgataacttttg 29763869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 37325893 - 37325851
Alignment:
Q  234 ttaaagaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||    
T  37325893 ttaaagaaatgatatttgtacaaccaatttgtgacaacttttg 37325851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 43079702 - 43079664
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  43079702 agaaatgatatttgtacaaccactttgtgataatttttg 43079664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 2849591 - 2849550
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaa 279  Q
    |||||||||||||||||||  | |||||||||||||||||||    
T  2849591 agaaatgatatttgtacaattattttttgataacttttgaaa 2849550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 17500698 - 17500735
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| | |||||||||    
T  17500698 agaaatgatatttgtacaaccactttattataactttt 17500735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 17552516 - 17552479
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| | |||||||||    
T  17552516 agaaatgatatttgtacaaccactttattataactttt 17552479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 28824504 - 28824541
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  28824504 agaaatgatatttgtacaaccactttctgacaactttt 28824541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 30818068 - 30818023
Alignment:
Q  237 aagaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||||||| ||| ||| ||||||||| ||||    
T  30818068 aagaaatgatatttgtacaaccattttatgacaacttttgagacaa 30818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 37392044 - 37392081
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  37392044 agaaatgatatttgtacaaccattttttgacaactttt 37392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 38023494 - 38023457
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  38023494 agaaatgatatttgtacaaccactttgtgataattttt 38023457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 2469704 - 2469740
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  2469704 agaaatgatatttgtacaaccactttgtgacaacttt 2469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 7212737 - 7212693
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||| ||||||| | ||||||| ||||||    
T  7212737 agaaatgatatttgtacaactactttttcacaacttttaaaacaa 7212693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 8459615 - 8459651
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||| | ||||||    
T  8459615 agaaatgatatttgtacaaccactttttaacaacttt 8459651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 12141900 - 12141940
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||| ||||||||||||||| ||| ||||||||||||||    
T  12141900 agaaatcatatttgtacaaccattttgtgataacttttgaa 12141940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 22330690 - 22330654
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  22330690 agaaatgatatttgtacaaccactttgtgacaacttt 22330654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 22623383 - 22623427
Alignment:
Q  232 agttaaagaaatgatatttgtacaaccactttttgataacttttg 276  Q
    ||||| || ||||||||||| ||||||| ||||||||||||||||    
T  22623383 agttagaggaatgatatttgaacaaccattttttgataacttttg 22623427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 28596908 - 28596944
Alignment:
Q  239 gaaatgatatttgtacaaccactttttgataactttt 275  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  28596908 gaaatgatatttgtacaaccactttgtgacaactttt 28596944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 31785530 - 31785494
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  31785530 agaaatgatatttgtacaaccactttatgaaaacttt 31785494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 37352049 - 37352013
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  37352049 agaaatgatatttgtacaaccactttgtgacaacttt 37352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 43444636 - 43444672
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  43444636 agaaatgatatttgtacaaccactttatgacaacttt 43444672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 1523364 - 1523306
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||    
T  1523364 agaaatgatatttgtacaaccactttttgataacttttgaaataactatctctgtcata 1523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 279
Target Start/End: Original strand, 40434009 - 40434048
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaa 279  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40434009 aaatgatatttgtacaaccactttttgataacttttgaaa 40434048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 45333357 - 45333395
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45333357 agaaatgatatttgtacaaccactttttgataacttttg 45333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 1922496 - 1922437
Alignment:
Q  237 aagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||| ||||||||||||| |||||  |||| | |||||||||||    
T  1922496 aagaaatgatatttgtacaatcactttttgataatttttgtgacaaccctctctctcata 1922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 32821636 - 32821693
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||  |||||||||||    
T  32821636 agaaatgatatttgtacaaccactttgtgacaactttt-aaacaattttctctctcata 32821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 35883677 - 35883619
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||  | ||||||| |||||||||||||| ||| |||||||||    
T  35883677 agaaatgatatttgtacaattattttttgacaacttttgaaacaaccatatctctcata 35883619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 40809498 - 40809555
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||  |||| |||| |||||||||||||| |||||||||||||    
T  40809498 agaaatgatatttgtacaat-acttattgacaacttttgaaacaaccatctctctcata 40809555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 51571415 - 51571452
Alignment:
Q  237 aagaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  51571415 aagaaatgatatttgtacaaccactttttgacaacttt 51571452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 2362357 - 2362393
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||||||||||||||    
T  2362357 agaaatgatatttgtacaatcactttttgataacttt 2362393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 45272219 - 45272183
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||||| ||||||    
T  45272219 agaaatgatatttgtacaaccactttttgacaacttt 45272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 277
Target Start/End: Original strand, 49425739 - 49425778
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttga 277  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  49425739 agaaatgatatttgtacaaccactttgtgacaacttttga 49425778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 4213073 - 4213131
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||   |||||||||||    
T  4213073 agaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcata 4213131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 27352631 - 27352669
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  27352631 agaaatgatatttgtacaaccattttgtgataacttttg 27352669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 27742618 - 27742676
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  27742618 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 27742676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 29706773 - 29706715
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||| ||||||||||||  | || | |||||||||||    
T  29706773 agaaatgatatttgtacaaccattttatgataacttttgttataaccttctctctcata 29706715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 283
Target Start/End: Original strand, 41619060 - 41619102
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaat 283  Q
    ||||||||||||||||| | ||||||||||||||||| |||||    
T  41619060 aatgatatttgtacaactattttttgataacttttgagacaat 41619102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Complemental strand, 42843414 - 42843376
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  42843414 agaaatgatatttgtacaacaattttttgataacttttg 42843376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 47642677 - 47642619
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| ||||||||||||||||  ||||   |||||||||||    
T  47642677 agaaatgatatttgaacaaccattttttgataacttttgtgacaactttctctctcata 47642619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 48858824 - 48858882
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  48858824 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 48858882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 48872380 - 48872437
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||| ||| ||||||| | |||| | |||||||||||    
T  48872380 agaaatgatatttgtacaaccactttatgacaactttt-agacaaccttctctctcata 48872437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 366658 - 366695
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  366658 agaaatgatatttatacaaccactttctgataactttt 366695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 23554752 - 23554789
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  23554752 agaaatgatatttgtacaaccattttttgataattttt 23554789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 45740614 - 45740577
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  45740614 agaaatgatatttgtacaaccactttgtgacaactttt 45740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 50226949 - 50226912
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  50226949 agaaatgatatttgtacaaccactttgtgacaactttt 50226912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 14983785 - 14983821
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||||| | ||||||    
T  14983785 agaaatgatatttgtacaaccactttttaacaacttt 14983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 18639772 - 18639736
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||| | ||||||||||||||||    
T  18639772 aaatgatatttgtacaacgattttttgataacttttg 18639736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 26839381 - 26839421
Alignment:
Q  236 aaagaaatgatatttgtacaaccactttttgataacttttg 276  Q
    ||||||||| |||||||||||||| ||| ||||||||||||    
T  26839381 aaagaaatggtatttgtacaaccattttatgataacttttg 26839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 29264016 - 29264052
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  29264016 agaaatgatatttgtacaaccactttatgacaacttt 29264052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 29489429 - 29489393
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  29489429 agaaatgatatttgtacaaccattttgtgataacttt 29489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 33675901 - 33675937
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  33675901 agaaatgacatttgtacaaccactttttgacaacttt 33675937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 33694271 - 33694227
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    ||||||||||||||||||| |||||||| | ||||||| ||||||    
T  33694271 agaaatgatatttgtacaatcactttttaacaacttttaaaacaa 33694227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Complemental strand, 35335562 - 35335530
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataa 270  Q
    |||||| ||||||||||||||||||||||||||    
T  35335562 agaaatcatatttgtacaaccactttttgataa 35335530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 37843502 - 37843466
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  37843502 agaaatgatatttgtacaactactttttgacaacttt 37843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 48261142 - 48261178
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  48261142 aaatgatattcgtacaaccactttttgacaacttttg 48261178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 48872087 - 48872051
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  48872087 agaaatgatatttgtacaaccattttttgacaacttt 48872051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 49453492 - 49453528
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  49453492 agaaatgatatttgtacaaccactttgtgacaacttt 49453528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 51231374 - 51231318
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||||||| | ||||||||  ||||   |||||||||||    
T  51231374 aaatgatatttgtacaaccactttttaacaacttttggcacaactctctctctcata 51231318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1625 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1625
Description:

Target: scaffold1625; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 848 - 793
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||| || ||||||| |||||||||||||| |||||||||||||    
T  848 aatgatatttgtacaatcattttttgacaacttttgaaacaaccatctctctcata 793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 282
Target Start/End: Original strand, 13093629 - 13093671
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  13093629 aaatgatatttgtacaaccactttttgacaacttttgaaacaa 13093671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 20029264 - 20029320
Alignment:
Q  240 aaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||| |||||||||||||| | |||||||||||||| | |||||||||||    
T  20029264 aaatgatatttatacaaccactttttaacaacttttgaaacaaccttctctctcata 20029320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 31883374 - 31883330
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  31883374 agaaatgatatttgtacaaccactttttgacaacttttgtaacaa 31883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 31204880 - 31204822
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||   |||||||||||    
T  31204880 agaaatgatatttctacaaccattttttgataacttttgaaataactctctctctcata 31204822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 296
Target Start/End: Original strand, 38598 - 38655
Alignment:
Q  239 gaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||  |||||| |||||| ||||||| | |||||||||||    
T  38598 gaaatgatatttgtacaaccaaattttgacaactttggaaacaaccctctctctcata 38655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 31517239 - 31517202
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||||||| |||||||    
T  31517239 agaaatgatatttgtacaaccactttttgacaactttt 31517202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 32253781 - 32253813
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataa 270  Q
    |||||||||||||||||||||||||||||||||    
T  32253781 agaaatgatatttgtacaaccactttttgataa 32253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 10840722 - 10840777
Alignment:
Q  241 aatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    ||||||||||||||||  | ||||||| |||||||| ||||||| |||||||||||    
T  10840722 aatgatatttgtacaattattttttgacaacttttggaacaatcctctctctcata 10840777  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 17551449 - 17551391
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||| ||||||| |||||||| |||||   |||||||||||    
T  17551449 agaaatgatatttgaacaaccattttttgacaacttttgtaacaactttctctctcata 17551391  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 33712321 - 33712379
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||   |||||||||||    
T  33712321 agaaatgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcata 33712379  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 2241877 - 2241840
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  2241877 agaaatgatatttatacaaccactttttgacaactttt 2241840  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 6256427 - 6256487
Alignment:
Q  229 ttaagttaaagaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctct 290  Q
    |||||||  |||||||||||||||||||  | ||||||| || |||||||||||||||||||    
T  6256427 ttaagtttgagaaatgatatttgtacaattattttttgacaa-ttttgaaacaatcatctct 6256487  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 6435037 - 6435074
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaactttt 6435074  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 8173382 - 8173345
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  8173382 agaaatgatatttgtgcaaccactttgtgataactttt 8173345  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 29383558 - 29383595
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  29383558 agaaatgatatttgtacaaccactttctgacaactttt 29383595  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 32457322 - 32457285
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  32457322 agaaatgatatttgtacaaccactttgtgacaactttt 32457285  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 1196059 - 1196095
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  1196059 agaaatgatatttgtacaatcactttttgacaacttt 1196095  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 1897698 - 1897734
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  1897698 agaaatgatatttgtacaaccactttatgacaacttt 1897734  T

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Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 28397 - 28339
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||   |||||||||||    
T  28397 agaaatgatatttgaacaaccactttttgataacttttgtgacaactttctctctcata 28339  T

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Target: scaffold0514 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 1915 - 1858
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaatcatctctctcata 296  Q
    |||||||||||||||||||||| ||||  ||||||||||  |||||| |||||||||||    
T  1915 agaaatgatatttgtacaaccatttttgtataacttttg-tacaatcttctctctcata 1858  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 18596 - 18634
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttg 276  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  18596 agaaatgatatttgtacaaccaatttgtgataacttttg 18634  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 219734 - 219697
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  219734 agaaatgatatttgtacaaccactttgtgacaactttt 219697  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 4316 - 4353
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  4316 agaaatgatatttgtacaaccattttatgataactttt 4353  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 15604 - 15567
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaactttt 15567  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 113626 - 113663
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  113626 agaaatgatatttgtacaaccactttgtgacaactttt 113663  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 88809 - 88846
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataactttt 275  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  88809 agaaatgatatttgtacaaccaatttgtgataactttt 88846  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 337119 - 337159
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaa 278  Q
    |||||||||||||||||||||| ||| ||| ||||||||||    
T  337119 agaaatgatatttgtacaaccattttctgacaacttttgaa 337159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 29831 - 29795
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  29831 agaaatgatatttatacaaccactttttgacaacttt 29795  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 15901 - 15857
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttttgaaacaa 282  Q
    |||||| ||||||||||||  | ||||||||||||||||||||||    
T  15901 agaaataatatttgtacaataattttttgataacttttgaaacaa 15857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 31659 - 31623
Alignment:
Q  238 agaaatgatatttgtacaaccactttttgataacttt 274  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  31659 agaaatgatatttgtacaaccattttttgacaacttt 31623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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