View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3991_low_7 (Length: 461)
Name: NF3991_low_7
Description: NF3991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3991_low_7 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 18 - 442
Target Start/End: Complemental strand, 47601471 - 47601047
Alignment:
| Q |
18 |
gaaagttattgtcctcgctttacagccacatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47601471 |
gaaagttattgtcctcgctttacagccacatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagc |
47601372 |
T |
|
| Q |
118 |
actttgtggttcacattcccgatggtttgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggact |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47601371 |
actttgtggttcacattcccgatggtttgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggact |
47601272 |
T |
|
| Q |
218 |
cgacaaacctggtatgcatataggtgttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaatt |
317 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
47601271 |
cgataaacctggtatgcatataggtgttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggggctaatgtgactgtaatt |
47601172 |
T |
|
| Q |
318 |
agtacatcacctaacaaagaaaaagaagcaagagaatgcttaggagctgactcatttttgataagtcgtgaccaagataagatgcaagtataaatacaat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47601171 |
agtacatcacctaacaaagaaaaagaagcaagagaatgcttaggagctgactcatttttgataagtcgtgaccaagataagatgcaagtataaatacaat |
47601072 |
T |
|
| Q |
418 |
agttcaatattctaatattcttaaa |
442 |
Q |
| |
|
|||| || ||||||||||||||||| |
|
|
| T |
47601071 |
agttaaacattctaatattcttaaa |
47601047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 52 - 415
Target Start/End: Original strand, 13393539 - 13393902
Alignment:
| Q |
52 |
gtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgccact |
151 |
Q |
| |
|
|||||||||| ||||||| | || |||||| ||||| ||||||||||||||||||| ||| ||||||||| | ||||||||||| ||||| || ||||| |
|
|
| T |
13393539 |
gtgccaaatacagtgatggaagcatcacatatggagggtactctgactcaatggttgcagatgagcactttatagttcacattcctgatggcttaccact |
13393638 |
T |
|
| Q |
152 |
tgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttggt |
251 |
Q |
| |
|
|||| || |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||| |
|
|
| T |
13393639 |
tgaatctgctgctcctctcctttgtgccggtattactgtgtatagtcctcttcgatattttggactcgacaagcctggtatgaatataggtattgttggt |
13393738 |
T |
|
| Q |
252 |
cttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagcaagag |
351 |
Q |
| |
|
|||||||||||||||||| ||| ||| |||||||| ||||||||||| |||||||| || ||||||||||||||||| |||||||| |||||||||| || |
|
|
| T |
13393739 |
cttggtggacttggtcacttgggtgtgaagtttgcaaaagcttttggagctaatgtaacagtaattagtacatcacccaacaaagagaaagaagcaatag |
13393838 |
T |
|
| Q |
352 |
aatgcttaggagctgactcatttttgataagtcgtgaccaagataagatgcaagtataaataca |
415 |
Q |
| |
|
|| | |||||||||| |||||| | ||||||| |||||||||||| ||||| ||| ||||||| |
|
|
| T |
13393839 |
aaaacctaggagctgattcatttcttataagtcatgaccaagataaaatgcaggtacaaataca |
13393902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 61 - 431
Target Start/End: Original strand, 13385320 - 13385691
Alignment:
| Q |
61 |
atcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgccacttgaagctac |
160 |
Q |
| |
|
|||||||||| |||| |||| |||||||||| ||||||||| ||||||| | ||| |||| |||||||||||||| ||||| || |||||||||||| | |
|
|
| T |
13385320 |
atcgtgatggaaccatcacacacggaggttattctgactcattggttgtggctgagaacttcgtggttcacattcctgatggattaccacttgaagctgc |
13385419 |
T |
|
| Q |
161 |
tgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttggtcttggtgga |
260 |
Q |
| |
|
||| ||||| |||||||| || ||||| ||||| ||||||||| |||| ||||||||||||||||||||| | ||| | |||||||||||||||||||| |
|
|
| T |
13385420 |
tgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatactttggactcgacaaacctggtcttcatgtcggtgttgttggtcttggtggg |
13385519 |
T |
|
| Q |
261 |
cttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagcaagagaatgcttag |
360 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||| |||| ||||| |
|
|
| T |
13385520 |
cttggtcacatggctgtgaaatttgccaaagcttttggtgctaatgtgaccgtaattagtacatctgctagcaaagaaaaggaagcaaaagaacacttag |
13385619 |
T |
|
| Q |
361 |
gagctgactcatttttgataagtcgtgaccaagataagatgcaagta-taaatacaatagttcaatattcta |
431 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||| ||||| ||| ||| | ||||||||||||||||| |
|
|
| T |
13385620 |
gagctgattcatttctgataagtcgtgaccaagataaaatgcaggtacaaaaaaaaatagttcaatattcta |
13385691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 36 - 370
Target Start/End: Complemental strand, 13419631 - 13419297
Alignment:
| Q |
36 |
tttacagccacatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattc |
135 |
Q |
| |
|
||||||| |||||||||||| || ||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
13419631 |
tttacagtcacatgtggtgcaaagtatcgtgatggcaccgtcacatatggaggttactccgactcaatggttgcagacgagcactttgtgattcgcattc |
13419532 |
T |
|
| Q |
136 |
ccgatggtttgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgca |
235 |
Q |
| |
|
| ||| | || || ||||| ||| | | |||||||||||| || || |||||||||||||||||||||||| |||||| ||||||||| ||||||||| | |
|
|
| T |
13419531 |
ctgatagcttacctcttgatgctgccggtcctcttctttgcgctggaatcacagtgtatagtcctcttcgacattttgaactcgacaagcctggtatgaa |
13419432 |
T |
|
| Q |
236 |
tataggtgttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaa |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||| || ||||| |||||||| |||||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
13419431 |
tataggtgttgttggtcttggtggacttggccatatggctgtgaaatttgcaaaagctttcggtgctaatgtgaccgtaattagtacatcgcctcacaaa |
13419332 |
T |
|
| Q |
336 |
gaaaaagaagcaagagaatgcttaggagctgactc |
370 |
Q |
| |
|
||||| ||||||| |||| ||| ||||||||||| |
|
|
| T |
13419331 |
gaaaaggaagcaatagaacacttgggagctgactc |
13419297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 44 - 431
Target Start/End: Original strand, 13389124 - 13389511
Alignment:
| Q |
44 |
cacatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggt |
143 |
Q |
| |
|
||||||||||||||| ||||| ||||| || | |||||| |||||||| ||||||||| |||||| ||| ||| |||| |||||||||||||| ||||| |
|
|
| T |
13389124 |
cacatgtggtgccaagtatcgcgatggaacgagcacatatggaggttattctgactcattggttgcagatgagaacttcgtggttcacattcctgatgga |
13389223 |
T |
|
| Q |
144 |
ttgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtg |
243 |
Q |
| |
|
|| |||||||||||| |||| ||||| |||||||| || ||||| ||||| ||||||||| |||||| ||||||||| ||||||||| | | |||||||| |
|
|
| T |
13389224 |
ttaccacttgaagctgctgcacctctcctttgtgctgggatcactgtgtacagtcctcttagatattatggactcgataaacctggtcttcgtataggtg |
13389323 |
T |
|
| Q |
244 |
ttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaaga |
343 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| || ||||| ||||| |||||||| | ||| || || |||||||||||||| |||||||| ||||| |
|
|
| T |
13389324 |
ttgttggtcttggtgggcttggtcacatggctgtgaaatttgccaaagcatttggtgcgattgtaacagtgattagtacatcacccaacaaagagaaaga |
13389423 |
T |
|
| Q |
344 |
agcaagagaatgcttaggagctgactcatttttgataagtcgtgaccaagataagatgcaagtataaatacaatagttcaatattcta |
431 |
Q |
| |
|
||||| |||| ||||||||| || |||||| ||||||||||||||||||| || ||||| ||| ||| | ||| ||||||| ||||| |
|
|
| T |
13389424 |
agcaatagaacacttaggagccgattcatttctgataagtcgtgaccaagagaaaatgcaggtacaaaaaaaattgttcaattttcta |
13389511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 44 - 390
Target Start/End: Complemental strand, 13413278 - 13412932
Alignment:
| Q |
44 |
cacatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggt |
143 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| ||| || ||||||||||| ||||||||||||| |||||||||||||||| ||| |||||| || |
|
|
| T |
13413278 |
cacatgtggtgccaagtatcgtgatggaaccgtcacttatggaggttactccgactcaatggttgcagacgagcactttgtgattcgcattcctgacaac |
13413179 |
T |
|
| Q |
144 |
ttgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtg |
243 |
Q |
| |
|
| || |||||| | ||| |||||| |||||||| ||| |||| || |||||||||||||||| |||||||||||| || |||||| | |||||||||| |
|
|
| T |
13413178 |
atacctcttgaatttgctggtcctctcctttgtgctggtgtcaccgtatatagtcctcttcgattttttggactcgataagcctggtttacatataggtg |
13413079 |
T |
|
| Q |
244 |
ttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaaga |
343 |
Q |
| |
|
|||||||||||||||||||||| || |||||||| || ||||| |||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |
|
|
| T |
13413078 |
ttgttggtcttggtggacttggccatatggctgtgaaatttgccaaagctttcggtgctaatgttaccgtaattagtacatcgcctaacaaagaaaagga |
13412979 |
T |
|
| Q |
344 |
agcaagagaatgcttaggagctgactcatttttgataagtcgtgacc |
390 |
Q |
| |
|
||||| |||| |||||||||||| |||||| |||||||| |||||| |
|
|
| T |
13412978 |
agcaatagaacacttaggagctgattcatttctgataagtagtgacc |
13412932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 62 - 370
Target Start/End: Complemental strand, 13447156 - 13446848
Alignment:
| Q |
62 |
tcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgccacttgaagctact |
161 |
Q |
| |
|
|||||||||||| | ||| || ||||||| ||| ||||||||||||| |||||||||||||||| ||| |||||| ||| | || || ||||| | | | |
|
|
| T |
13447156 |
tcgtgatggcactatcacctatggaggtttctccgactcaatggttgcagacgagcactttgtgattcgcattcctgatagcttacctcttgatggtgcc |
13447057 |
T |
|
| Q |
162 |
gctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttggtcttggtggac |
261 |
Q |
| |
|
| |||||||||||| || || ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
13447056 |
ggtcctcttctttgcgctggagtcacagtgtatagtcctcttcgacattttggactcgacaagcctggtatgaatataggagttgttggtcttggtggac |
13446957 |
T |
|
| Q |
262 |
ttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagcaagagaatgcttagg |
361 |
Q |
| |
|
||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||||||| || ||||| || ||||| ||||||| |||| |||||| |
|
|
| T |
13446956 |
ttggtcatatggctgtgaaatttgctaaagcttttggtgctaaagtgaccgtaattagtacgtcgcctaaaaaggaaaaggaagcaatagaacacttagg |
13446857 |
T |
|
| Q |
362 |
agctgactc |
370 |
Q |
| |
|
||| ||||| |
|
|
| T |
13446856 |
agcagactc |
13446848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 45 - 370
Target Start/End: Complemental strand, 13426513 - 13426188
Alignment:
| Q |
45 |
acatgtggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtt |
144 |
Q |
| |
|
||||||||||| || ||||||||||||| | |||||| |||||||| || ||||||||||||| ||| |||||||||||| ||| |||||| ||| | | |
|
|
| T |
13426513 |
acatgtggtgctaagtatcgtgatggcagcgtcacatatggaggttattccgactcaatggttgcagatgagcactttgtgattcgcattcctgatagct |
13426414 |
T |
|
| Q |
145 |
tgccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgt |
244 |
Q |
| |
|
| || ||||| | | | | |||||||||||| || || |||||||||||||||||||||| ||||| ||||||||| ||||||||| ||||||| || |
|
|
| T |
13426413 |
tacctcttgatgttgccggtcctcttctttgcgctggagtcacagtgtatagtcctcttcgtcattttcaactcgacaagcctggtatgaatataggcgt |
13426314 |
T |
|
| Q |
245 |
tgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaa |
344 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| || || || |||||||||||||||||||| || |||||||||||||| |||| ||||||||| ||| |
|
|
| T |
13426313 |
tgttggtcttggtggacttggtcatatggctgtgaaattcgccaaagcttttggtgctaatgtaacagtaattagtacatcgcctagcaaagaaaaggaa |
13426214 |
T |
|
| Q |
345 |
gcaagagaatgcttaggagctgactc |
370 |
Q |
| |
|
|| | |||| |||||||||||||| |
|
|
| T |
13426213 |
gcgatagaacatttaggagctgactc |
13426188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 50 - 388
Target Start/End: Complemental strand, 13454121 - 13453783
Alignment:
| Q |
50 |
tggtgccaaatatcgtgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgcca |
149 |
Q |
| |
|
|||| ||||||| ||||||| |||| ||| | ||||| | |||||||||||||||| ||||||||||||||| ||| |||||| ||| || || |
|
|
| T |
13454121 |
tggttccaaatacagtgatggaaccagcactcatggaggcttctctgactcaatggtttccgacgagcactttgtgtttcgcattccagatcagttacct |
13454022 |
T |
|
| Q |
150 |
cttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttg |
249 |
Q |
| |
|
||||| || |||||||||| |||||||| || || || || ||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||| |
|
|
| T |
13454021 |
cttgatgcagctgctcctctcctttgtgctgggataaccgtatatagtcctcttcgacattttggactcgacaagcctgatatgaatataggtgttgttg |
13453922 |
T |
|
| Q |
250 |
gtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagcaag |
349 |
Q |
| |
|
|||||||||||||||| || ||||| || || || || |||||||| |||||||||||||| |||||||||||||||||||| || ||||| |||||| |
|
|
| T |
13453921 |
gtcttggtggacttggccatatggccgtgaaattcgccaaagctttcggtgctaatgtgaccgtaattagtacatcacctaaaaaggaaaaggaagcatt |
13453822 |
T |
|
| Q |
350 |
agaatgcttaggagctgactcatttttgataagtcgtga |
388 |
Q |
| |
|
|||| |||| |||| ||||||||| | ||||| ||||| |
|
|
| T |
13453821 |
agaacacttacgagcggactcatttctaataagccgtga |
13453783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 65 - 373
Target Start/End: Complemental strand, 13379140 - 13378832
Alignment:
| Q |
65 |
tgatggcaccaccacatacggaggttactctgactcaatggttgtagacgagcactttgtggttcacattcccgatggtttgccacttgaagctactgct |
164 |
Q |
| |
|
||||||||| | |||||| ||||| ||||||||| | |||||||| ||||| |||||| | || | |||||||||| || ||||||| ||| | ||| |
|
|
| T |
13379140 |
tgatggcactatcacatatggaggctactctgacaccatggttgtcgacgaacactttattgtccgtattcccgatgccttatcacttgatgctgccgct |
13379041 |
T |
|
| Q |
165 |
cctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttggtcttggtggacttg |
264 |
Q |
| |
|
||||| |||||||| || |||||||||||||| || | | |||||||| | ||||||||||| ||||||||||||| ||||||||||||||| | | |
|
|
| T |
13379040 |
cctctcctttgtgctgggatcacagtgtatagcccaatgaaacattttggatttgacaaacctggactgcatataggtgtggttggtcttggtggattag |
13378941 |
T |
|
| Q |
265 |
gtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagcaagagaatgcttaggagc |
364 |
Q |
| |
|
|||| |||||||| ||||| || ||||| ||||||| ||| || ||||| | ||||| || ||||||||| | || ||||| | ||| |||||||||| |
|
|
| T |
13378940 |
gtcatatggctgtgaagttcgccaaagcctttggtgttaaggtaactgtggtaagtacttctcctaacaaaaagaaggaagccattgaacgcttaggagc |
13378841 |
T |
|
| Q |
365 |
tgactcatt |
373 |
Q |
| |
|
||||||||| |
|
|
| T |
13378840 |
tgactcatt |
13378832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 147 - 374
Target Start/End: Complemental strand, 13373262 - 13373035
Alignment:
| Q |
147 |
ccacttgaagctactgctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttg |
246 |
Q |
| |
|
|||||||| || ||||||||||||||||||| || |||||||| ||||| ||| | |||||||||||| |||| |||||| | ||| | ||||| | |
|
|
| T |
13373262 |
ccacttgatgccgctgctcctcttctttgtgcggggatcacagtatatagccctttgaaatattttggacttaacaagcctggtttacatgtgggtgtgg |
13373163 |
T |
|
| Q |
247 |
ttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaagaaaaagaagc |
346 |
Q |
| |
|
|||||||||||||| | ||||| |||||||| || ||| | |||||||||||||||||||| || || || || || || ||||||||| | || ||||| |
|
|
| T |
13373162 |
ttggtcttggtggattaggtcatatggctgtgaaatttaccaaagcttttggtgctaatgtaacagtgataagcacttctcctaacaaaaagaaggaagc |
13373063 |
T |
|
| Q |
347 |
aagagaatgcttaggagctgactcattt |
374 |
Q |
| |
|
| ||| ||||||||||||||||||| |
|
|
| T |
13373062 |
cattgaacacttaggagctgactcattt |
13373035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 28430625 - 28430798
Alignment:
| Q |
162 |
gctcctcttctttgtgccggtatcacagtgtatagtcctcttcgatattttggactcgacaaacctggtatgcatataggtgttgttggtcttggtggac |
261 |
Q |
| |
|
|||||||| || || ||||| ||||| |||||||| ||| | |||||||||||| || |||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
28430625 |
gctcctctcctctgcgccgggatcacggtgtatagccctttgaaatattttggacttgataaacctaacttgcaattaggtgtggttggtcttggtggac |
28430724 |
T |
|
| Q |
262 |
ttggtcacatggctgttaagtttgctaaagcttttggtgctaatgtgactgtaattagtacatcacctaacaaa |
335 |
Q |
| |
|
||||||| |||||||| || ||||| ||||||||||||||||| || || || ||||| || || ||||||||| |
|
|
| T |
28430725 |
ttggtcatatggctgtgaaatttgccaaagcttttggtgctaaggtaacagtgattagcacttctcctaacaaa |
28430798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 299
Target Start/End: Original strand, 8354109 - 8354168
Alignment:
| Q |
240 |
ggtgttgttggtcttggtggacttggtcacatggctgttaagtttgctaaagcttttggt |
299 |
Q |
| |
|
|||||||||||| | || |||||||||||||||||||| || |||| |||||| |||||| |
|
|
| T |
8354109 |
ggtgttgttggtttgggaggacttggtcacatggctgtaaaatttggtaaagcatttggt |
8354168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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