View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3992_high_5 (Length: 575)
Name: NF3992_high_5
Description: NF3992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3992_high_5 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 460; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 12 - 558
Target Start/End: Complemental strand, 2621715 - 2621183
Alignment:
| Q |
12 |
acatcatcactgcctcgcgttgttgagttgaaagagttagatggactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatg |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
2621715 |
acatcatcactgcctcgcgttgttgagttgaaagagttagatggactcacgagtctacaaccactcatgttttgcatgtgatctctattcatgatagatg |
2621616 |
T |
 |
| Q |
112 |
gggtgtcatcgatttggtccttttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttc |
211 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2621615 |
gggtgtcatcggtttggtccttttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttc |
2621516 |
T |
 |
| Q |
212 |
tgcgatcataccattttgaacaaccgcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttg |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2621515 |
cgcgatcataccattttgaacaaccgcaatgatgtctgcattttgaatggtggataagcggtgagcgatgatgatggtggtgcgtccaacggtggctttg |
2621416 |
T |
 |
| Q |
312 |
tctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaa |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2621415 |
tctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaaaagaatttttggcatttttatgatagctcttgcaa |
2621316 |
T |
 |
| Q |
412 |
tggaaatcctttgcttttgcccccctgacatttgaactcctctctccccaacctgcagtagtaaacatgcggctaataatgtgtcacccttgaagtagga |
511 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| |
|
|
| T |
2621315 |
tggaaatcctttgcttttgccccccagacatttgaactcctctctccccaacctgcagtagta--------------aatgtgtcacccatcaagtagga |
2621230 |
T |
 |
| Q |
512 |
atataagaattttaaatgtgaataagttaatttgaggagcaattttt |
558 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2621229 |
atataagaattttaaatgtgaataagttaatttgaggagcaattttt |
2621183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 12 - 558
Target Start/End: Complemental strand, 2590148 - 2589602
Alignment:
| Q |
12 |
acatcatcactgcctcgcgttgttgagttgaaagagttagatggactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatg |
111 |
Q |
| |
|
||||||||| ||||||| |||| |||||| || ||| |||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2590148 |
acatcatcattgcctcgtgttgctgagttcaaggagctagaaggactaacgagtctacaagtactcgtgttttgcatgtgatctttattcatgatagatg |
2590049 |
T |
 |
| Q |
112 |
gggtgtcatcgatttggtccttttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttc |
211 |
Q |
| |
|
||||||| || ||| |||| |||||||||| || ||||||||||||||||| |||| |||||||||| ||||| ||||||||| ||||||||| |||| |
|
|
| T |
2590048 |
gggtgtcgtcagtttcgtccctttttgtttgttgaagacgaacaagggaggcataaattgaattgtcatcttgcacgaggctttcgtgagatcctatttc |
2589949 |
T |
 |
| Q |
212 |
tgcgatcataccattttgaacaaccgcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttg |
311 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
2589948 |
cataatcttaccattttgaacaactgcaatgatgtctgcattttggatggtagataggcggtgagcgatgatgatggtggtgcgtccaacggtagctttg |
2589849 |
T |
 |
| Q |
312 |
tctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaa |
411 |
Q |
| |
|
|||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2589848 |
tctagagcttcttggacaaccctttctgattcagaatcgagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaa |
2589749 |
T |
 |
| Q |
412 |
tggaaatcctttgcttttgcccccctgacatttgaactcctctctccccaacctgcagtagtaaacatgcggctaataatgtgtcacccttgaagtagga |
511 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||| |||| ||| ||||||||||| || | |||||||| |
|
|
| T |
2589748 |
tggcaatcctttgcttttgcccccctgacatttgtactcctctctctctaacctgtagtagtaaagatgcagctgataatgtgtcagccatcaagtagga |
2589649 |
T |
 |
| Q |
512 |
atataagaattttaaatgtgaataagttaatttgaggagcaattttt |
558 |
Q |
| |
|
||| ||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2589648 |
ataaaagaactttaaatgtgactaagttaatttgaggagcaattttt |
2589602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 34 - 479
Target Start/End: Original strand, 2571325 - 2571770
Alignment:
| Q |
34 |
ttgagttgaaagagttagatggactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatggggtgtcatcgatttggtcctt |
133 |
Q |
| |
|
|||||||||||||| |||| ||||||| ||||||| || || |||| ||| |||||||||| |||||||||||||||| |||||||| ||||||| || |
|
|
| T |
2571325 |
ttgagttgaaagagctagaatgactcacaagtctacgactactcgtgatttccatgtgatctctattcatgatagatggagtgtcatcactttggtcatt |
2571424 |
T |
 |
| Q |
134 |
ttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttctgcgatcataccattttgaaca |
233 |
Q |
| |
|
| | ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| || |||||||| |||| || || |||||||||||| |
|
|
| T |
2571425 |
tctagtttgttggagacgaacaagggatgtgtaaagagaattgtcattttgcatgaggctatcgtgagatcccatttccatgaccagaccattttgaacg |
2571524 |
T |
 |
| Q |
234 |
accgcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactc |
333 |
Q |
| |
|
|||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||| | |||||||||| |||||||||||| |||| |
|
|
| T |
2571525 |
accgcaataatgtctgcattttggatggtagataagcggtgagcgatgatgatggtggttcgtccaactgcagctttgtctagagcttcttggacgactc |
2571624 |
T |
 |
| Q |
334 |
tttcggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgccc |
433 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| || |
|
|
| T |
2571625 |
gttcggattcagaatcgagtgcacttgttgcttcgtctaacaatagaatttttggcatttttatgatggctcttgcaattgcaattctttgcttttgtcc |
2571724 |
T |
 |
| Q |
434 |
ccctgacatttgaactcctctctccccaacctgcagtagtaaacat |
479 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
2571725 |
ccctgacatttgaactcccctctccccaacctgtagtagtaaacat |
2571770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 55 - 479
Target Start/End: Original strand, 2674837 - 2675261
Alignment:
| Q |
55 |
gactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatggggtgtcatcgatttggtccttttttgtttgctggagacgaac |
154 |
Q |
| |
|
|||| |||||||||| || || |||||||||||||||| || |||||||||||||||| |||||||| |||| || ||| | ||||| ||||||||||| |
|
|
| T |
2674837 |
gacttacgagtctacgactactcgtgttttgcatgtgacctctattcatgatagatggagtgtcatcagtttgatcatttctagtttgttggagacgaac |
2674936 |
T |
 |
| Q |
155 |
aagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttctgcgatcataccattttgaacaaccgcaatgatgtctgcattt |
254 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||||||| |||||||| ||||| |||| |||||||||| ||||| |||||||||||||||||| |
|
|
| T |
2674937 |
gagggaggtgtaaagagaattttcattttgcatgaggctttcgtgagatcccgtttccatgatcttaccattttggacaactgcaatgatgtctgcattt |
2675036 |
T |
 |
| Q |
255 |
tgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactctttcggattcagaatctagtg |
354 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||| ||||||| ||||||||||||||| |||| |
|
|
| T |
2675037 |
tggatggttgataagcggtgagcgatgatgatggtggtgcgtccaaccgccgctttgtctagagcttcttgaacaactcgttcggattcagaatcaagtg |
2675136 |
T |
 |
| Q |
355 |
cacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgcccccctgacatttgaactcctct |
454 |
Q |
| |
|
||||||||||||||||||| |||| |||||| ||||||||||| || ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
2675137 |
cacttgttgcttcatctagtaataaaattttaggcatttttattatggctcttgcaatggcaatcctttgtttttgtccccctgacatctgaactcctct |
2675236 |
T |
 |
| Q |
455 |
ctccccaacctgcagtagtaaacat |
479 |
Q |
| |
|
|||||||||||| |||| ||||||| |
|
|
| T |
2675237 |
ctccccaacctgtagtaataaacat |
2675261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 87 - 471
Target Start/End: Complemental strand, 2436243 - 2435859
Alignment:
| Q |
87 |
atgtgatctttattcatgatagatggggtgtcatcgatttggtccttttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgca |
186 |
Q |
| |
|
||||||| |||||||||||||||| |||| ||| || |||||| ||||| || || |||||| |||| ||||| | ||||| ||| |||||||||||| |
|
|
| T |
2436243 |
atgtgatgtttattcatgatagatagggtatcaccgtcttggtcatttttggtgtgttggagatgaactagggatgtgtaaatggaactgtcattttgca |
2436144 |
T |
 |
| Q |
187 |
tgaggctttcatgagatcctgtttctgcgatcataccattttgaacaaccgcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgat |
286 |
Q |
| |
|
|||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
2436143 |
tgaggctttcgtgagatcctgtttccatgatcttaccattttgaacaactgcaatgatgtctgcattttggatggtggataagcggtgagcgatgatgat |
2436044 |
T |
 |
| Q |
287 |
ggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaatagaattttt |
386 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||| || |||||||||||||| |||||||||||||||||| |
|
|
| T |
2436043 |
ggtggtgcgtccaactacagctttgtctagagcttcttggacaactcgttcagattcagaatcgagagcacttgttgcttcgtctagcaatagaattttt |
2435944 |
T |
 |
| Q |
387 |
ggcatttttatgatagctcttgcaatggaaatcctttgcttttgcccccctgacatttgaactcctctctccccaacctgcagta |
471 |
Q |
| |
|
|||||||||| || ||||||||||||| ||||||||||||||| ||||| |||||||||| ||| |||||||||||||| |||| |
|
|
| T |
2435943 |
ggcatttttactatggctcttgcaatggcaatcctttgcttttgtcccccagacatttgaattcccctctccccaacctgtagta |
2435859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 37 - 476
Target Start/End: Complemental strand, 2449472 - 2449033
Alignment:
| Q |
37 |
agttgaaagagttagatggactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatggggtgtcatcgatttggtccttttt |
136 |
Q |
| |
|
||||||||||| |||| ||||||||||| || || || ||||||||| ||||||||| |||||||||||| ||| |||| || ||||||| ||| | |
|
|
| T |
2449472 |
agttgaaagagctagaacgactcacgagtgtatcactacacgtgttttggatgtgatctctattcatgataggtggagtgtggtcactttggtcatttct |
2449373 |
T |
 |
| Q |
137 |
tgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttctgcgatcataccattttgaacaacc |
236 |
Q |
| |
|
||||| || |||||||| ||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||| | |
|
|
| T |
2449372 |
agtttgttgaagacgaacgagggaggtgtaaagagagctgtcattttgcataaggctttcgtgagatcctgtttccacgatcttaccattttgaacgatt |
2449273 |
T |
 |
| Q |
237 |
gcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactcttt |
336 |
Q |
| |
|
|||||||| |||||| || |||||||||||||||||||| ||||| |||||||||||| |||| |||||||| || ||||||||||||||||||| || |
|
|
| T |
2449272 |
gcaatgatatctgcagttctgatggtggataagcggtgagcgatgataatggtggtgcgttcaactgtggctttctcaaaagcttcttggacaactcgtt |
2449173 |
T |
 |
| Q |
337 |
cggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgcccccc |
436 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||| || || ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2449172 |
cggattcaaaatctagtgcacttgttgcttcgtctagcaatagaattcttggatttttgattatggctcttgcaatggaaatcctttgcttttgtccccc |
2449073 |
T |
 |
| Q |
437 |
tgacatttgaactcctctctccccaacctgcagtagtaaa |
476 |
Q |
| |
|
||||||||| ||||| ||||||||||||| ||||||||| |
|
|
| T |
2449072 |
tgacatttgtactcccctctccccaacctatagtagtaaa |
2449033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 34 - 481
Target Start/End: Original strand, 2642967 - 2643414
Alignment:
| Q |
34 |
ttgagttgaaagagttagatggactcacgagtctacaaccacccgtgttttgcatgtgatctttattcatgatagatggggtgtcatcgatttggtcctt |
133 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||| || || |||||||||||||||| || | ||||||||||||| | ||| || ||||||| || |
|
|
| T |
2642967 |
ttgagttgaaagagctagaacgactcacgagtctacgactactcgtgttttgcatgtgacctctgttcatgatagatgcagggtcctcattttggtcatt |
2643066 |
T |
 |
| Q |
134 |
ttttgtttgctggagacgaacaagggaggcgtaaagagaattgtcattttgcatgaggctttcatgagatcctgtttctgcgatcataccattttgaaca |
233 |
Q |
| |
|
| | ||||| ||||||||||| || |||| |||||||||||| |||| |||| |||||||||||||| ||||||||| ||| | |||||||||| |
|
|
| T |
2643067 |
tctagtttgttggagacgaacgagagaggtgtaaagagaattttcatcttgcgcgaggctttcatgagttcctgtttccattatcttgccattttgaaac |
2643166 |
T |
 |
| Q |
234 |
accgcaatgatgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactc |
333 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||||| ||| ||||| ||||||||||| ||||||||||| | | ||||||||| ||| |||||||||| || |
|
|
| T |
2643167 |
actgcaatgatgtcagcattttggatggtggataggcgatgagcgatgatgatggttgtgcgtccaactgcgactttgtctagagcgtcttggacaattc |
2643266 |
T |
 |
| Q |
334 |
tttcggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgccc |
433 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||| || | ||||| |||||| ||||||||||| || ||||||||||||| ||||||||| |||||||| |
|
|
| T |
2643267 |
gttcggattcagaatcaagtgcacttgtcgcttcgtccaacaataaaattttaggcatttttattatggctcttgcaatggcaatcctttgtttttgccc |
2643366 |
T |
 |
| Q |
434 |
ccctgacatttgaactcctctctccccaacctgcagtagtaaacatgc |
481 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
2643367 |
ccctgacatttgaactcctctctccccaacctgtagtagtaaacatgc |
2643414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 244 - 480
Target Start/End: Original strand, 2598288 - 2598524
Alignment:
| Q |
244 |
tgtctgcattttgaatggtggataagcggtgagcaatgatgatggtggtgcgtccaacggtggctttgtctaaagcttcttggacaactctttcggattc |
343 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||| | |||||||||| |||||||||||| |||| ||||||||| |
|
|
| T |
2598288 |
tgtctgcattttggatggtagataatcggtgagcgatgatgatggtggtgcgtccaactgaagctttgtctagagcttcttggacgactcgttcggattc |
2598387 |
T |
 |
| Q |
344 |
agaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgcccccctgacatt |
443 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||||| |||||||||||| |
|
|
| T |
2598388 |
agaatcgagtgcacttgttgcttcgtctaacaatagaatttttggcatttttatgatggctcttgcaattgcaattctttgcttttgtccccctgacatt |
2598487 |
T |
 |
| Q |
444 |
tgaactcctctctccccaacctgcagtagtaaacatg |
480 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
2598488 |
tgtactcccctctccccaacctgtagtagtaaacatg |
2598524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 439
Target Start/End: Original strand, 33788355 - 33788455
Alignment:
| Q |
339 |
gattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttgcaatggaaatcctttgcttttgcccccctg |
438 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| |||| |||||| ||| |||||||||||||||||||||||| || ||||||||||| || |||| |
|
|
| T |
33788355 |
gattcagagtcaagtgcactagttgcttcatcaagcagaagaattactggattttttatgatagctcttgcaatggctattctttgcttttgtcctcctg |
33788454 |
T |
 |
| Q |
439 |
a |
439 |
Q |
| |
|
| |
|
|
| T |
33788455 |
a |
33788455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 3431225 - 3431292
Alignment:
| Q |
399 |
atagctcttgcaatggaaatcctttgcttttgcccccctgacatttgaactcctctctccccaacctg |
466 |
Q |
| |
|
|||||||||||||| | ||||||||||||||| || || || | ||||||||||| ||| |||||||| |
|
|
| T |
3431225 |
atagctcttgcaattgcaatcctttgcttttgtccaccagataattgaactcctcgctcaccaacctg |
3431292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 430
Target Start/End: Complemental strand, 27731374 - 27731253
Alignment:
| Q |
309 |
ttgtctaaagcttcttggacaactctttcggattcagaatctagtgcacttgttgcttcatctagcaatagaatttttggcatttttatgatagctcttg |
408 |
Q |
| |
|
||||||||||||| ||| ||||| | ||| ||||| |||||||||||||||||||||||| ||||||| ||||| || || ||| |||||||||| |
|
|
| T |
27731374 |
ttgtctaaagcttgttgtacaacacgttccgattcgacatctagtgcacttgttgcttcatcaagcaataatattttagggtttcttaaaatagctcttg |
27731275 |
T |
 |
| Q |
409 |
caatggaaatcctttgcttttg |
430 |
Q |
| |
|
|||||| | |||||||||||| |
|
|
| T |
27731274 |
caatggccaccctttgcttttg |
27731253 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 31440500 - 31440455
Alignment:
| Q |
330 |
actctttcggattcagaatctagtgcacttgttgcttcatctagca |
375 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||| |||| |
|
|
| T |
31440500 |
actctttcggattgagaatccagtgcacttgttgcttcatcaagca |
31440455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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