View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3994_low_16 (Length: 252)
Name: NF3994_low_16
Description: NF3994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3994_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 52761740 - 52761978
Alignment:
| Q |
1 |
atagattttggtcaaatttccaaatgaaaatcaaaagaagcatttaattgttttggagttcaatacacaatcatttgaaattgaggagtctcaacctttt |
100 |
Q |
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| T |
52761740 |
atagatcttggtcaaatttccaaatgaaaatcaaaagaagcatttaattgttttggagttcaatacacaatcatttgaaattgaagagtctcaacctttt |
52761839 |
T |
|
| Q |
101 |
taaatgcatacatagatgttataggtacctgtgaagcgtaggtctgttggaatgggcttttatcttcattaagctgaagaattgatttaaacaagattta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52761840 |
taaatgcatacatagatgttataggtacctgtgaagcgtaggtctgttggaatgggcttttatcttcattaagctgaagaattgatttaaacaagattta |
52761939 |
T |
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| Q |
201 |
tcaatgtagtatataaataatgctaattcagatagatga |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
52761940 |
tcaatgtagtatataaataatgctaattcagatagatga |
52761978 |
T |
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