View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3996_low_19 (Length: 236)
Name: NF3996_low_19
Description: NF3996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3996_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 37443305 - 37443086
Alignment:
| Q |
1 |
ttaccagggaaatattttagctaggttatgtataaaagataatagtgcattcaattagattagacatgcttagtttatatatgatcgatgacataaaaga |
100 |
Q |
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| T |
37443305 |
ttaccagggaaatattttagctaggttatgtataaaagataatagtgcattcaattagattagacatgcttagtttatatatgatcgatgacataaaaga |
37443206 |
T |
|
| Q |
101 |
agtaattgagtgatatctatacctatgtaatcaattatatacaagcatttttcatttttactcccaccctacatctatattggatatgtggctggaataa |
200 |
Q |
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| T |
37443205 |
agtaattgagtgatatctatacctatgtaatcaat--tatacaagcatttttcatttttactcccaccctacatctatattggatatgtggctggaataa |
37443108 |
T |
|
| Q |
201 |
taatggggcctgaatcataatt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
37443107 |
taatggggcctgaatcataatt |
37443086 |
T |
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