View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3997_high_2 (Length: 330)
Name: NF3997_high_2
Description: NF3997
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3997_high_2 |
 |  |
|
| [»] chr1 (12 HSPs) |
 |  |
|
| [»] chr7 (1 HSPs) |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 291; Significance: 1e-163; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 1868775 - 1868461
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
1868775 |
agttccttgcaccattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgatactttggcggtgttggttctatctaagaga |
1868676 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1868675 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtagatatgacaaagcttcagctacctctgcggctatcttaagacgag |
1868576 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1868575 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
1868476 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
1868475 |
ctctaaacaacaccc |
1868461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 1843166 - 1842852
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||| |||||||||| |
|
|
| T |
1843166 |
agttccttgcaccattgtggctatttcagtttgatcaattggaaccaatcttgaagctccaaaatctgatactttggctgtgttggttctatctaagaga |
1843067 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| | || |||||||||||||||||||||||||||||||| |
|
|
| T |
1843066 |
atgttatcactcttgacatctctatggattattggtattgaggcatatgaatgtagatatgacaaagtttcagctacctctgcggctatcttaagacgag |
1842967 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1842966 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
1842867 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
1842866 |
ctctaaacaacaccc |
1842852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 16 - 330
Target Start/End: Complemental strand, 1857177 - 1856866
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1857177 |
agttccttgcaccattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
1857078 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1857077 |
atgttatcactcttgacatctctatggatgatgggtgttgaggcatatgaatgtagatatgacagagcctcagctacctctgcggctatcttaagacgag |
1856978 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
| ||||| ||| || ||| | | |||| || |||||| ||||| ||||||| || |||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
1856977 |
tcttccaagttggatcatt---cgtcttaccttttgtgtgaataaattcagaaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgt |
1856881 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
1856880 |
ttctagacaacaccc |
1856866 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 1815867 - 1816178
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
1815867 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttagcggtgttggttccatctaagaga |
1815966 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||| |||||| | |||||| |||||| |||||||||| | |||||| ||||||||| |
|
|
| T |
1815967 |
atgttagcactcttgacatctctatggataatgggtattgaggcagctgaatgcagatatgacagagctccagctacctcaacagctatcctaagacgag |
1816066 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
||||||| || || || | | |||| ||||||| | | ||| ||||||| || |||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
1816067 |
ttttccaagtaagatcgtt---cgtcttaccttgtgtgcgaagaaattcagaaagagtaccattgctaacaaactcataaaccaacaaaggaacttctgt |
1816163 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
1816164 |
ttctagacaacaccc |
1816178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 9161689 - 9162000
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||| |||||||| |||| || |||||||||||||||||||| || |||||||||||||| || ||||| || ||| | ||||||||||| |
|
|
| T |
9161689 |
agttccttgtaccattgttgctatctcggtttgatcaagtggaaccaacctcgaagctccaaaatcagaaacttttgcattgtaattgtcatctaagaga |
9161788 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
||||| |||||| |||||||||||||| || |||||||| ||| ||||||||||||| |||| |||| | ||| |||||| |||||||| | ||| | |
|
|
| T |
9161789 |
atgttggtactcttaacatctctatggataataggtattgatgcagatgaatgtaaatacgataaagctccggctgtctctgctgctatctttaaacgtg |
9161888 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattacttt-gt-gtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttct |
313 |
Q |
| |
|
||||||||||| ||| || | |||| |||| || | ||||| ||| | |||| || |||||| |||| |||||||| |||||| ||||||||||| |
|
|
| T |
9161889 |
ttttccatgttggattgtttgctttat--ctttagtattatgtatgaaatcgaaaagtgtaccattgctaacgaattcatacaccaacgaaggaacttct |
9161986 |
T |
 |
| Q |
314 |
gtctctaaacaaca |
327 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9161987 |
gtctctaaacaaca |
9162000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 9155777 - 9156088
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||| |||||||| |||| || ||||||||||||||||| || || |||||||||||||| || ||||| || |||| | |||| |||||| |
|
|
| T |
9155777 |
agttccttgaaccattgttgctatctcggtttgatcaagtggaactaacctcgaagctccaaaatcggaaactttcgctgtgtaattgtcatccaagaga |
9155876 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
||||| ||| ||||||||||||||||| || |||||||| ||| ||||||||| ||| |||| |||| | ||| |||||| |||||||| | ||| | |
|
|
| T |
9155877 |
atgttggtacttttgacatctctatggataatcggtattgatgcagatgaatgtagatacgataaagctccggctgtctctgctgctatctttaaacggg |
9155976 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattacttt-gt-gtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttct |
313 |
Q |
| |
|
||||||||||| ||| || |||| |||| || | ||||| ||| || |||| || |||||| |||| |||||||||||||| ||||||||||| |
|
|
| T |
9155977 |
ttttccatgttggattgtttgttttat--ctttagtactatgtatgaaatcaaaaagtgtaccattgctaacgaattcataaaccaaggaaggaacttct |
9156074 |
T |
 |
| Q |
314 |
gtctctaaacaaca |
327 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9156075 |
gtctctaaacaaca |
9156088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 9170516 - 9170725
Alignment:
| Q |
17 |
gttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagagaa |
116 |
Q |
| |
|
||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| || || || |||||||| |||| | |||| ||||||| |
|
|
| T |
9170516 |
gttccttgcaccattgttgctatctctgtttgatcaagtggaaccaatcttgaagctccgaagtcggaaactttggcagtgtaattgtcatccaagagaa |
9170615 |
T |
 |
| Q |
117 |
tgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctat-cttaagacgag |
215 |
Q |
| |
|
|||| |||||| |||||||||||||| || || ||||| ||| ||||||||| ||| |||| |||| ||||| |||||| ||||| |||||| || | |
|
|
| T |
9170616 |
tgttggtactcttaacatctctatggataattggaattgatgcagatgaatgtagatacgataaagctccagctgtctctgctgctatccttaag-cggg |
9170714 |
T |
 |
| Q |
216 |
ttttccatgtt |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
9170715 |
ttttccatgtt |
9170725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 9200083 - 9200292
Alignment:
| Q |
17 |
gttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagagaa |
116 |
Q |
| |
|
||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| || || ||||| ||||||| | |||| ||||||| |
|
|
| T |
9200083 |
gttccttgcaccattgttgctatctctgtttgatcaagtggaaccaatctggaagctccaaagtcagaaacttttgcggtgtaattgtcatccaagagaa |
9200182 |
T |
 |
| Q |
117 |
tgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgagt |
216 |
Q |
| |
|
|||| |||||| |||||||| ||||| || || ||||| ||| |||||||| |||||||| |||| ||||| ||| || |||||| | | ||| || |
|
|
| T |
9200183 |
tgttggtactcttaacatctctgtggataattggaattgatgcagctgaatgtagatatgataaagctccagctgtctccgctgctatccttaaacgtgt |
9200282 |
T |
 |
| Q |
217 |
tttccatgtt |
226 |
Q |
| |
|
|||||||||| |
|
|
| T |
9200283 |
tttccatgtt |
9200292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 327
Target Start/End: Original strand, 9229514 - 9229794
Alignment:
| Q |
47 |
tgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagagaatgttatcactcttgacatctctatggatga |
146 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||| || |||| | |||| ||||||||||| |||| ||||||||||||||||| | |
|
|
| T |
9229514 |
tgatcaagtggaaccaatcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggcacttttgacatctctatggataa |
9229613 |
T |
 |
| Q |
147 |
tgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgagttttccatgtttcattattcaccttattact |
246 |
Q |
| |
|
| |||| || ||| ||||||||| |||||||| |||| | |||| || || |||||| | | ||| ||||||||| || ||||||| |||| | | | |
|
|
| T |
9229614 |
ttggtaaggatgcagatgaatgtagatatgataaagctcctgctatttccgctgctatccttaaacgcgttttccatattgcattattttccttttcaat |
9229713 |
T |
 |
| Q |
247 |
ttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaaca |
327 |
Q |
| |
|
||||| || ||| | ||||||| |||||| ||| |||||||||||| | |||||||||| |||||| |||||||| |
|
|
| T |
9229714 |
actagtgtgcatcaaatcgaaaagggtaccattgctaataaattcataaactagtaaaggaacttgtgtctccaaacaaca |
9229794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 16 - 330
Target Start/End: Original strand, 9218598 - 9218912
Alignment:
| Q |
16 |
agttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagaga |
115 |
Q |
| |
|
||||||||| |||||||| |||| || |||||||||||||||||||||||||||||||| || || || ||||| || |||| | |||| |||||| |
|
|
| T |
9218598 |
agttccttgtaccattgtcgctatctcggtttgatcaagtggaaccaatcttgaagctccgaagtcggaaacttttgcagtgtaattgtcatccaagaga |
9218697 |
T |
 |
| Q |
116 |
atgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgag |
215 |
Q |
| |
|
||||| |||||| |||||||||||||| || || ||||| ||| |||||||| |||||||| ||| ||||| |||||| |||||| | | ||| | |
|
|
| T |
9218698 |
atgttggtactcttaacatctctatggataattggaattgatgcagctgaatgtagatatgataaagcaccagctgtctctgctgctatccttaaacgtg |
9218797 |
T |
 |
| Q |
216 |
ttttccatgtttcattattcaccttattactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
||||||||| | ||| || | |||| | | ||||| ||| || |||| || || ||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
9218798 |
ttttccatgctggattgtttgctttatctttacaattttgtatgaaatcaaaaagtgttccgttgctaacaaattcatacaccaacgaaggaacttctgt |
9218897 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
9218898 |
ctccaaacaacaccc |
9218912 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 330
Target Start/End: Complemental strand, 9118762 - 9118449
Alignment:
| Q |
17 |
gttccttgcaccattgtggctacttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagagaa |
116 |
Q |
| |
|
|||||||| |||| ||| |||| || ||||||||||||||||||||| | |||||||| ||||| || ||||| || |||| | |||| ||||||| |
|
|
| T |
9118762 |
gttccttgtaccactgttgctatctcggtttgatcaagtggaaccaatttggaagctccgaaatcggaaacttttgcagtgtaattgtcatccaagagaa |
9118663 |
T |
 |
| Q |
117 |
tgttatcactcttgacatctctatggatgatgggtattgaggcatatgaatgtaaatatgatagagcttcagctacctctgcggctatcttaagacgagt |
216 |
Q |
| |
|
|||| |||||| |||||||||||||| || || | ||| ||| ||||||||| ||| |||| |||| ||||| |||||| |||||| | ||||| || |
|
|
| T |
9118662 |
tgttggtactcttaacatctctatggataattggaaatgatgcagatgaatgtagatacgataaagctccagctgtctctgctgctatccttagacgtgt |
9118563 |
T |
 |
| Q |
217 |
tttccatgtttcattattcaccttattactttgt-gtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgt |
315 |
Q |
| |
|
|| |||| || |||||| | ||||| ||| || | ||||| ||| | |||| || || | | |||| |||||||| ||||| ||||||||||||| |
|
|
| T |
9118562 |
ttcccatcttggattatttattttatt-cttagtattttgtatgaaatcgaaaagtgtaccgtggctaacgaattcatagaccaaggaaggaacttctgt |
9118464 |
T |
 |
| Q |
316 |
ctctaaacaacaccc |
330 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9118463 |
ctctaaacaacaccc |
9118449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 9170777 - 9170829
Alignment:
| Q |
278 |
ttggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccc |
330 |
Q |
| |
|
||| |||||||||| || ||||| |||||||||||||||||| ||||||||| |
|
|
| T |
9170777 |
ttgctaacaaattcgtacaccaatgaaggaacttctgtctctagacaacaccc |
9170829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 330
Target Start/End: Complemental strand, 37572211 - 37572123
Alignment:
| Q |
242 |
ttactttgtgtgtgtataaaaccagaaagggtgccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaacaccc |
330 |
Q |
| |
|
|||| ||||||||||||||| ||||||| || |||||| ||||||| |||||||||||| |||||||||||| |||| ||||||||| |
|
|
| T |
37572211 |
ttaccttgtgtgtgtataaattcagaaagagtaccattgctaacaaactcataaaccaaccgaggaacttctgtttctagacaacaccc |
37572123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 40568463 - 40568423
Alignment:
| Q |
287 |
aattcataaaccaacaaaggaacttctgtctctaaacaaca |
327 |
Q |
| |
|
||||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
40568463 |
aattcataaacaagcaagggaacttctgtctctaaacaaca |
40568423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 40591369 - 40591329
Alignment:
| Q |
287 |
aattcataaaccaacaaaggaacttctgtctctaaacaaca |
327 |
Q |
| |
|
||||||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
40591369 |
aattcataaacaagcaatggaacttctgtctctaaacaaca |
40591329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 40597863 - 40597811
Alignment:
| Q |
275 |
ccattggtaacaaattcataaaccaacaaaggaacttctgtctctaaacaaca |
327 |
Q |
| |
|
||||||| || |||||||||||| | ||| ||||||||||| ||||||||||| |
|
|
| T |
40597863 |
ccattgggaataaattcataaacaagcaatggaacttctgtttctaaacaaca |
40597811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University