View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3998_low_26 (Length: 360)
Name: NF3998_low_26
Description: NF3998
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3998_low_26 |
 | |
|
| [»] scaffold0356 (1 HSPs) |
| | |
|
| [»] scaffold0262 (1 HSPs) |
| | |
|
| [»] scaffold0134 (1 HSPs) |
| | |
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| [»] scaffold0002 (2 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0225 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0017 (1 HSPs) |
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| [»] scaffold0118 (2 HSPs) |
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| [»] scaffold0196 (1 HSPs) |
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| [»] scaffold0073 (1 HSPs) |
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| [»] scaffold0179 (1 HSPs) |
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Alignment Details
Target: scaffold0356 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0356
Description:
Target: scaffold0356; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 16600 - 16410
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||||| ||| |
|
|
| T |
16600 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttatatgtagcttcacacaaccttctttcaaaatcttttgtagaaaa |
16501 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
16500 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtatctcaatcatggcctctcatctccgctcttatcttaacccttacat |
16410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 131; Significance: 7e-68; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 20589 - 20779
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
20589 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
20688 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
20689 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
20779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 42233576 - 42233766
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
42233576 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
42233675 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
42233676 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
42233766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 22845370 - 22845560
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
22845370 |
ttttgctacttttctaatcttatatgtcatcttgttccacgtatcattttcgcttatatgtaacttcacacaaccttccttcaaaatcttttgtaggaaa |
22845469 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22845470 |
acactttggttttgatcctttaaatgtcaccacttgatctttgtatctcaatcatggcctctcatctccgctcttatcttaacccttacat |
22845560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 21068697 - 21068507
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
21068697 |
ttttgctacttttctaatctcatatgtcatcttattccacgtatcattttcccttctatgtagcttcacacaaccttccttcaaaatcttttgtaggaaa |
21068598 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| ||||||||| || |||| ||||||||||| ||| ||||||||| |||||| |||| |||| |||||| |||||||| |
|
|
| T |
21068597 |
acactttggttttgatcctttaattgtcaccacttgatccttgtttcccaatcatggcttctcatatccgttcttatcttaatccttacat |
21068507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 7039036 - 7039226
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
||||||| |||| |||||||| ||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||| |||||| |||| |
|
|
| T |
7039036 |
ttttgctgctttgttaatctcatatgtcatcttgtttcacatatcattttcgcttctatgtagttttgcacaaccttcctttaaaatcttttgtaagaaa |
7039135 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||| | |||||||||||||||| ||||| ||||||||||||||| ||||| | | |||||||| | |||||||||||||||||||| |
|
|
| T |
7039136 |
acactatatttttcatcctttaaattccaccacttgatccttgtatcccaatcacgacatctcatctttggtcttctcttaacccttacat |
7039226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 131; Significance: 7e-68; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 15334881 - 15335071
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
15334881 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcatctatgcagcttcacacaaccttccttcaaaatcttttgtaggaaa |
15334980 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||| || |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15334981 |
acactttggtcttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
15335071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 18858124 - 18858313
Alignment:
| Q |
2 |
tttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaaa |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| | ||| ||||||||| |
|
|
| T |
18858124 |
tttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttaacataaccttccttcaaatttttttgtaggaaaa |
18858223 |
T |
|
| Q |
101 |
cactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18858224 |
cactttggttttgatcctttaaatctcaccacttgatccttgtatcacaatcatggcctctcatctccgctcttatcttaacccttacat |
18858313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 30882892 - 30883082
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||| ||| |||||||| |
|
|
| T |
30882892 |
ttttgctacttttctaatcttatatgtcatcttgttccacgtatcattttcgcttatatgtaacttcacacaatcttccttcaaaatcttttgtaggaaa |
30882991 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30882992 |
acactttggttttgatcctttaaatgtcaccacttgatctttgtatctcaatcatggcctctcatctccgctcttatcttaacccttacat |
30883082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 193 - 349
Target Start/End: Complemental strand, 27366914 - 27366762
Alignment:
| Q |
193 |
ggatggaccatataactctttctcttggttcttgaagcttatttatttgataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacatt |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
27366914 |
ggatggaccatataactctttctcttggttctttaagcttcttgatttgataattttcaatgcaatg----cttagagaaaccttttgatgcatgacatt |
27366819 |
T |
|
| Q |
293 |
ggatgtaggtacttcttttgcaggtggtctcaaatcttgacgtcctccaatatctct |
349 |
Q |
| |
|
||| |||||||| ||||||| || |||| ||||||||| ||| ||||||||||| |
|
|
| T |
27366818 |
ggaaacaggtacttattttgcatgtagtctaaaatcttgaggtctcccaatatctct |
27366762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 193 - 349
Target Start/End: Complemental strand, 27457261 - 27457109
Alignment:
| Q |
193 |
ggatggaccatataactctttctcttggttcttgaagcttatttatttgataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacatt |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
27457261 |
ggatggaccatataactctttctcttggttctttaagcttcttgatttgataattttcaatgcaatg----cttagagaaaccttttgatgcatgacatt |
27457166 |
T |
|
| Q |
293 |
ggatgtaggtacttcttttgcaggtggtctcaaatcttgacgtcctccaatatctct |
349 |
Q |
| |
|
||| |||||||| ||||||| || |||| ||||||||| ||| ||||||||||| |
|
|
| T |
27457165 |
ggaaacaggtacttattttgcatgtagtctaaaatcttgaggtctcccaatatctct |
27457109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 55557758 - 55557568
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
55557758 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
55557659 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
55557658 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
55557568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 14146193 - 14146006
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||| | ||| |||||||| |
|
|
| T |
14146193 |
ttttgctacttttctaatctcatatgtcatcttgttacacatatcattttcgtttctatgtagcttcacacaaccttccttcaaatttttttgtaggaaa |
14146094 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctta |
187 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||| | || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14146093 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtatgccaaccatggcctctcatctccgctcttatcttaaccctta |
14146006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 131; Significance: 7e-68; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 36208802 - 36208992
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |
|
|
| T |
36208802 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttccttcaaaatcttttgtagaaaa |
36208901 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||| ||| |||||||||||| || | ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
36208902 |
acactttggctttgatcctttaaatgtcatcacttgatccttgtatcccaatcatggcctctcatccccgctcttatcttaacccttacat |
36208992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 36521297 - 36521487
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
36521297 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
36521396 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||| ||||||||| |||||||||||| |||| ||||||||||| | | |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
36521397 |
acagtttggttttgatcctttaaatgtcaccacttgatccttgttttccaatcatggcctctcatctccgctcttatcttaacccttacat |
36521487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 52502156 - 52502346
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
52502156 |
ttttgctacttttctaatctcatatgtcatcttattccatgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
52502255 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| |||| ||| ||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
52502256 |
acactttggttttgatcctttaaatgtcaccacttgatcattgtttcccaatcatggcttctcatcttcgctcttatcttaacccttacat |
52502346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 6308894 - 6308704
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
||||||| |||| |||||||| ||||||||||||| ||| |||||||||||||||||||| | || ||||||||||||||||||| |||||| |||| |
|
|
| T |
6308894 |
ttttgctgctttgttaatctcatatgtcatcttgtttcacatatcattttcgcttctatgtggttttgcacaaccttcctttaaaatcttttgtaagaaa |
6308795 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||| | ||||||||||||||| ||||| ||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||| |
|
|
| T |
6308794 |
acactatatttttcatcctttaaactccaccacttgatccttgtatcccaatcatgacatctcatctttggtcttctcttaacccttacat |
6308704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 51094314 - 51094236
Alignment:
| Q |
248 |
ttcaatgcaatgcattcctagagaaaccttttgatgcatgacattggatgtaggtacttcttttgcaggtggtctcaaa |
326 |
Q |
| |
|
||||||| |||| ||| ||||||||||||||| ||||||| || ||| |||||||||||||||| ||||||||||| |
|
|
| T |
51094314 |
ttcaatgttatgctttcgtagagaaaccttttgtagcatgacgttagatagaggtacttcttttgcaagtggtctcaaa |
51094236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 51773938 - 51773985
Alignment:
| Q |
4 |
tgctacttttctaatctcacatgtcatcttgttccacgtatcattttc |
51 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| |||| |||||||||| |
|
|
| T |
51773938 |
tgctacttgtctaatctcacatgtaatcttgtcccacatatcattttc |
51773985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24247408 - 24247595
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
24247408 |
ttttgctacttttctaatctcatatgtcatcttgtttcacgtatcatttttgcttctatgtagtttcacacaaccttccttcaaaatcttttgtaggaaa |
24247507 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctta |
187 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
24247508 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtatcccaatcatggcctatcatctccgctcttatcttaaccctta |
24247595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24267704 - 24267515
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||| |||||| |
|
|
| T |
24267704 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacagccttccttcaaaatcttttgcaggaaa |
24267605 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
| ||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24267604 |
a-actttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
24267515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 27510961 - 27511151
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| |
|
|
| T |
27510961 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttaacacaaccttccttcaaaatcttttgttggaaa |
27511060 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||| |||| ||||||||||||||||||| ||| || |||||| |||||||| |
|
|
| T |
27511061 |
acactttggttttgatcctttaaatgtcaccacttgatccttttatcgcaatcatggcctctcatctctgcttttatcttaaaccttacat |
27511151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3643382 - 3643569
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
3643382 |
ttttgctacttttctaatatcatatgtcatcttgttccacgtatcatttttgcttatatgtagcttcacacaaccttccttcaaaatcttttgtaggaaa |
3643481 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctta |
187 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||||||| ||| |||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
3643482 |
acactttggttttgatcctttaaatgtcaccacttgatccttgcatctcaatcatttcctctcatctccgctcttatcttaaccctta |
3643569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 193 - 349
Target Start/End: Original strand, 45074128 - 45074280
Alignment:
| Q |
193 |
ggatggaccatataactctttctcttggttcttgaagcttatttatttgataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacatt |
292 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
45074128 |
ggatggaccatataactctttctcttggttccttaagcttcttgatttgataattttcaatgcaatg----cttagagaaaccttttgatgcatgacatt |
45074223 |
T |
|
| Q |
293 |
ggatgtaggtacttcttttgcaggtggtctcaaatcttgacgtcctccaatatctct |
349 |
Q |
| |
|
||| || ||||| ||||||| ||||| | ||||||||||||| ||||||||||| |
|
|
| T |
45074224 |
ggaaacagatacttattttgcatgtggtttaaaatcttgacgtctcccaatatctct |
45074280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0134 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0134
Description:
Target: scaffold0134; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 4302 - 4112
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||| | |||| |
|
|
| T |
4302 |
ttttgctacttttctaatctcatatgtcatcttgttccacatatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcaagaaa |
4203 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4202 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcctaatcatgacctctcatctccgctcttatcttaacccttacat |
4112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 25541427 - 25541241
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
25541427 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttccttcaaaatcttttgtaggaaa |
25541328 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctt |
186 |
Q |
| |
|
||| ||||||||| ||| |||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
25541327 |
acattttggttttgatcttttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatattaaccctt |
25541241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 10026564 - 10026754
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
10026564 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
10026663 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
10026664 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccactcttatcttaatccttacat |
10026754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 30350188 - 30349998
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaata-tttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||| |
|
|
| T |
30350188 |
ttttgctacttttctaatctcatatgtcatcttgtttcacgtatcattttcgcttatatgtaacttcacacaaccttccttcaaaatattttgtaggaaa |
30350089 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||| |||| ||| |||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
30350088 |
acactttggttttgatcctttaaatgtcaccacttgattcttgcatctcaatcatttcctctcatctccgctcttatcttaacccttacat |
30349998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 3691526 - 3691715
Alignment:
| Q |
2 |
tttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaaa |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
3691526 |
tttgctacttttataatctcttatgtcattttgttccacgtatcattttcgcttctatgtagcttcacaaaaccttccttcaaaatcttttgtaggaaaa |
3691625 |
T |
|
| Q |
101 |
cactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||| ||||||| |||| |||||||||||||| |||||| |||||||| |||||| |
|
|
| T |
3691626 |
cactttggttttgatcctttaaatgtcaccacttgatccatgtatcccaatcgtggcctctcatctctgctcttatcttaacctttacat |
3691715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 3875261 - 3875072
Alignment:
| Q |
2 |
tttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaaa |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||| |
|
|
| T |
3875261 |
tttgctacttttataatctcttatgtcattttgttccacgtatcattttcgcttctatgtagcttcacaaaaccttccttcaaaatcttttgtaggaaaa |
3875162 |
T |
|
| Q |
101 |
cactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||| ||||||| |||| |||||||||||||| |||||| |||||||| |||||| |
|
|
| T |
3875161 |
cactttggttttgatcctttaaatgtcaccacttgatccatgtatcccaatcgtggcctctcatctctgctcttatcttaacctttacat |
3875072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24628596 - 24628406
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
24628596 |
ttttgctacttttctaatctcatatgtcatcttattccatgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
24628497 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| |||| ||| ||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
24628496 |
acactttggttttgatcctttaaatgtcaccacttgatcattgtttcccaatcatggcttctcatcttcgctcttatcttaacccttacat |
24628406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 30345307 - 30345141
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
30345307 |
ttttgctacttttctaatctcatatgtcatcttgttccacatatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
30345208 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatct |
166 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| ||||||||| |||||||| |
|
|
| T |
30345207 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcttctcatct |
30345141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 193 - 327
Target Start/End: Complemental strand, 22631682 - 22631548
Alignment:
| Q |
193 |
ggatggaccatataactctttctcttggttcttgaagcttatttatttgataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacatt |
292 |
Q |
| |
|
||||||| ||||||||||||| | || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
22631682 |
ggatggagcatataactctttttgtttgttcttgaagcttctttatttgataattttcaatgcaatgctttcctagagaaaccttttgatgcatgacgtt |
22631583 |
T |
|
| Q |
293 |
ggatgtaggtacttcttttgcaggtggtctcaaat |
327 |
Q |
| |
|
||| ||||||| |||||| | |||||||||||| |
|
|
| T |
22631582 |
ggaatcaggtactgcttttgtaagtggtctcaaat |
22631548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17870290 - 17870238
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgc |
53 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
17870290 |
ttttgctacttttctaatcttatatgtcatcttgttccacgtatcattttcgc |
17870238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 320033 - 319843
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
320033 |
ttttgctacttttctaatctcatatgtcatcttgttccatgtatcattttcgcttatatgtagcttcacacaaccttccttcaaaatcttttgtaggaaa |
319934 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||| || |||||||||||| |||| |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
319933 |
acactttggtcttgatcctttaaatgtcaccacttgatccttgtatctcaatcatttcctctcatctccgctcttatcttaacccttacat |
319843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 318365 - 318177
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| |
|
|
| T |
318365 |
ttttgctacttttctaatctcatatgtcattttgttccatgtatcattttcgcttctatgtagcttcac-caaccttccttcaaaatattttgcaggaaa |
318267 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttaca |
189 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||| |
|
|
| T |
318266 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatgacctctcatatccgctcttatcttaacccttaca |
318177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 123; Significance: 4e-63; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 10112185 - 10112375
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
10112185 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttatatgtagcttcacacaaccttccttcaaaatcttttgcaggaaa |
10112284 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
10112285 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttctcaatcatggcctctcatcttcgctcttatcttaacccttacat |
10112375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 10001993 - 10002182
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
10001993 |
ttttgctacttttctaatctcatatgtcatcttgttctgcgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcaggaaa |
10002092 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttaca |
189 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| || |||||||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
10002093 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttctcaatcatggcctctcatcttcgctcttatcttaacccttaca |
10002182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 10245870 - 10246058
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatatttgtaggaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||| |
|
|
| T |
10245870 |
ttttgctacttttctaatctcatatgtcatcttgttcgacgtatcattttcacttctatgtagcttcacacaaccttccttcaaatcttttgcaggaaaa |
10245969 |
T |
|
| Q |
101 |
cactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||||||| || ||||||||||| |||||| ||||||| ||||||||||||||| |
|
|
| T |
10245970 |
cactttggttttgatcctttaaatgtcaccacttgatccttgtttctcaatcatggcct-tcatcttcgctcttatcttaacccttacat |
10246058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 11370224 - 11370413
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
11370224 |
ttttgctacttttataatctcatatgtcattttgttccacgtatcatttttacttctatgtagcttcacagaaccttccttcaaaatcttttgtaggaaa |
11370323 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||||| | |||| | |||||||||||| |||||| ||||||||||||||| |
|
|
| T |
11370324 |
acactttggttttgatcctttaaatgtcaccagttgatccttgtataccaatcgt-gcctctcatctctgctcttatcttaacccttacat |
11370413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 15327014 - 15326896
Alignment:
| Q |
28 |
catcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaaacactttggttttcatcctttaaatgc |
126 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
15327014 |
catcttgttccacgtagcattttcacttctaagtagcttcacacaaccttcctttaaaatcttttgtagaaaaacactatgtttttcatcctttaaatgc |
15326915 |
T |
|
| Q |
127 |
cacccattgatccttgtat |
145 |
Q |
| |
|
| || |||||| |||||| |
|
|
| T |
15326914 |
ccccacttgatcattgtat |
15326896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27275986 - 27276072
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat |
87 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27275986 |
ttttgctacttttctaatctcatatgtcatctttttccatttatcattttcacttctatgtagcttcacacaaccttccttcaaaat |
27276072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11310300 - 11310238
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtag |
63 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
11310300 |
ttttgctgctttgctaatctcatatgtcatcttgtttcacatatcattttcgcttctatgtag |
11310238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10041918 - 10042073
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatatt-tgtaggaaa |
99 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| | || || |||| ||||| |||||||||| || |||||| ||||||||| || ||| ||| |
|
|
| T |
10041918 |
ttttgatacttttctaatctcatgtgtcatcttgtcctac--atgatttgggcttccatgtagcttcgcaaaaccttgctttaaaatcttatgtttgaag |
10042015 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggc |
157 |
Q |
| |
|
| |||||| |||||| | ||||| ||||||| |||||||||| | |||||||||||| |
|
|
| T |
10042016 |
agactttgtttttcaccttttaagtgccaccacttgatccttggagcctaatcatggc |
10042073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 47694388 - 47694506
Alignment:
| Q |
7 |
tacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatatt-tgtaggaaaacactt |
105 |
Q |
| |
|
||||||||| |||||||||||||| |||| | | ||| |||||| |||| ||||||||||| | ||||||| |||||| || ||| ||||||||||| |
|
|
| T |
47694388 |
tacttttcttatctcacatgtcatattgtccaaaatattattttctcttccatgtagcttcatgtagccttcctctaaaatcttgtgttggaaaacactt |
47694487 |
T |
|
| Q |
106 |
tggttttcatcctttaaatg |
125 |
Q |
| |
|
| |||||| |||||||||| |
|
|
| T |
47694488 |
tatttttca-cctttaaatg |
47694506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 21112378 - 21112189
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||| |||||| |
|
|
| T |
21112378 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcacttctatgtagcttcacacagccttccttcaaaatcttttgcaggaaa |
21112279 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
| ||||||||||| |||||||||||| |||| ||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
21112278 |
a-actttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatagcctctcatctccgctcttatcttaacccttacat |
21112189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 224 - 327
Target Start/End: Original strand, 23120876 - 23120979
Alignment:
| Q |
224 |
ttgaagcttatttatttgataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacattggatgtaggtacttcttttgcaggtggtctc |
323 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| |
|
|
| T |
23120876 |
ttgaagcttctttatttgataattttcaatgcaatgctttcctagagaaaccttttgatgcatgacgttggaatcaggtacttcttttgcaagtggtctc |
23120975 |
T |
|
| Q |
324 |
aaat |
327 |
Q |
| |
|
|||| |
|
|
| T |
23120976 |
aaat |
23120979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 14772035 - 14772198
Alignment:
| Q |
28 |
catcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaaacactttggttttcatcctttaaatgc |
126 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
14772035 |
catcttgttccacgtagcattttcacttctaagtagcttcacacaaccttcctttaaaatcttttgtagaaaaacactatgtttttcatcctttaaatgc |
14772134 |
T |
|
| Q |
127 |
cacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
| || |||||| |||||| | || |||| |||| || |||||||||||||| ||||||| |
|
|
| T |
14772135 |
ccccacttgatcattgtataccaactgtggcatctcctcatcgctcttctcttaatacttacat |
14772198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 14769331 - 14769494
Alignment:
| Q |
28 |
catcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaaacactttggttttcatcctttaaatgc |
126 |
Q |
| |
|
|||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
14769331 |
catcttgttccacgtagcattttcacttctaagtagcttcgcacaaccttcctttaaaatcttttgtagaaaaacactatgtttttcatcctttaaatgc |
14769430 |
T |
|
| Q |
127 |
cacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
| || |||||| |||||| | || |||| |||| || |||||||||||||| ||||||| |
|
|
| T |
14769431 |
ccccacttgatcattgtataccaactgtggcatctcctcatcgctcttctcttaatacttacat |
14769494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 140898 - 140710
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||| |
|
|
| T |
140898 |
ttttgctacttttctaatctcatatgtcattttgttccatgtatcattttcgcttctatgtagcttcac-caaccttccttcaaaatattttgcaggaaa |
140800 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttaca |
189 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| ||||||| |||||||| ||||||||| |||||||||||||| |
|
|
| T |
140799 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatgacctctcatatccgctcttatcttaacccttaca |
140710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0225 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0225
Description:
Target: scaffold0225; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 12928 - 12739
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaatattt-gtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| || |||||||| | ||||| ||| | |||||| |
|
|
| T |
12928 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtgtcattttcgcttctatgtagctttac-caaccttctgtcaaaatcttttgcaggaaa |
12830 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
12829 |
acactttggttttgatcctttaaatgtcaccacttgatccttgtttcccaatcatggcctctcatctccgctcttatcttaacccttacat |
12739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 184361 - 184550
Alignment:
| Q |
2 |
tttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaaa |
100 |
Q |
| |
|
|||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |
|
|
| T |
184361 |
tttgctacttttataatctcttatgtcattttgttccacgtatcattttcgcttctatgtagcttcacaaaaccttccttcaaaatcttttgtaggaaaa |
184460 |
T |
|
| Q |
101 |
cactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||||||| |||||||||||| |||| ||||||| ||||||| |||| |||||||||||||| |||||| |||||||| |||||| |
|
|
| T |
184461 |
cactttggttttgatcctttaaatgtcaccacttgatccatgtatcccaatcgtggcctctcatctctgctcttatcttaacctttacat |
184550 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 188129 - 188308
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |
|
|
| T |
188129 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttccatcaaaatcttttgtaggaaa |
188228 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctt |
186 |
Q |
| |
|
||| ||||||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
188229 |
acattttggttttgatcctttaaatgtcaccacttgatccttgt-------tcatggcctctcatctccgctcttatcttaaccctt |
188308 |
T |
|
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Target: scaffold0118 (Bit Score: 111; Significance: 6e-56; HSPs: 2)
Name: scaffold0118
Description:
Target: scaffold0118; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 24159 - 23969
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| || ||| |
|
|
| T |
24159 |
ttttgctacttttctaatctcatatgtcatcttgttccacgcatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttacagaaaa |
24060 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
|||||||| |||| |||||||||||| |||| ||||||||||| | | |||||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
24059 |
acactttgtttttgatcctttaaatgtcaccacttgatccttgttttccaatcatggcctctcatctccgctcttatcttaactcttacat |
23969 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0118; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 27353 - 27163
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||| || ||| |
|
|
| T |
27353 |
ttttgctacttttctaatctcatatgtcatcttattccatgtatcattttcacttctatgtagcttcacacaaccttccttcaaaatcttttgcagaaaa |
27254 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||||||||||| |||||||||||| |||| |||||| |||| ||| ||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
27253 |
acactttggttttgatcctttaaatgtcaccacttgatcattgtttcccaatcatggcttctcatcttcgctcttatcttaacccttacat |
27163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0196 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0196
Description:
Target: scaffold0196; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 24324 - 24511
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaata-tttgtaggaaa |
99 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| ||| |
|
|
| T |
24324 |
ttttgctacttttctaatctcatatgtcatcttgttccacgtatcattttcgcttctatgtagcttgacgcaaccttcctttaaaatattttgtagaaaa |
24423 |
T |
|
| Q |
100 |
acactttg-gttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaaccctt |
186 |
Q |
| |
|
|||||||| ||||||||||||||| || |||| ||||| ||||||||| || ||| |||| ||| | ||||||||||||||||| |
|
|
| T |
24424 |
acactttgtgttttcatcctttaagtgtcaccatttgatgcttgtatcccaactgtggtatctcctcttctctcttctcttaaccctt |
24511 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0073 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0073
Description:
Target: scaffold0073; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 15319 - 15509
Alignment:
| Q |
1 |
ttttgctacttttctaatctcacatgtcatcttgttccacgtatcattttcgcttctatgtagcttcacacaaccttcctttaaaat-atttgtaggaaa |
99 |
Q |
| |
|
||||||| |||| |||||||| ||||||||||||| ||| |||||||||||||||||||||| || ||||||||||||||||||| |||||| |||| |
|
|
| T |
15319 |
ttttgctgctttgttaatctcatatgtcatcttgtttcacatatcattttcgcttctatgtagttttgcacaaccttcctttaaaatcttttgtaagaaa |
15418 |
T |
|
| Q |
100 |
acactttggttttcatcctttaaatgccacccattgatccttgtatcctaatcatggcctctcatctccgctcttctcttaacccttacat |
190 |
Q |
| |
|
||||| | |||||||||||||||| ||||| ||||||||||||||| ||||| | | |||||||| | |||||||||||||||||||| |
|
|
| T |
15419 |
acactatatttttcatcctttaaattccaccacttgatccttgtatcccaatcacgacatctcatctttggtcttctcttaacccttacat |
15509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0179 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0179
Description:
Target: scaffold0179; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 336
Target Start/End: Complemental strand, 28123 - 28029
Alignment:
| Q |
242 |
ataattttcaatgcaatgcattcctagagaaaccttttgatgcatgacattggatgtaggtacttcttttgcaggtggtctcaaatcttgacgtc |
336 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| || ||||| || ||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
28123 |
ataattttcaatgttatgctttcgtagagaaaccttttgttgtatgacgttagatagaggtatttcttttgtaggtggtctcaaatcttgacgtc |
28029 |
T |
|
Back To:
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