View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4000_high_9 (Length: 303)
Name: NF4000_high_9
Description: NF4000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4000_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 12 - 283
Target Start/End: Complemental strand, 30276337 - 30276066
Alignment:
| Q |
12 |
atgagatgaatacacaagtcacgtaaaagatttcaaagtatctcaaagaagatttgacaatataatcatttgcatccagttgacaaaactagtagggacg |
111 |
Q |
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|||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
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| T |
30276337 |
atgatatgaatacacaagtcacgtaaaagatttcaaagtatttcgaagaagatttgacaatataatcatttgcatccagttgataaaactggtagggacg |
30276238 |
T |
|
| Q |
112 |
aatcaaacatagagtttagtttgtctcacacacgttttagaattatttgtgcaactttcatcatcttcttcttgttcaagttatttatagtgtagacctc |
211 |
Q |
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|||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30276237 |
aatcaaacctaaagtttagtgtgtctcacacacgttttagaattatttgtgcaactttcatcatcttcttcttgttcaagttatttatagtgtagacctc |
30276138 |
T |
|
| Q |
212 |
aacacaagatcaaacatacatatagtttgtaagaaaataacattttatgatatgcttaacttgtattagtag |
283 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30276137 |
aacacaagatcaaacatatatatagtttgtaagaaaataacattttatgatatgcttaacttgtattagtag |
30276066 |
T |
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