View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4001_low_23 (Length: 250)

Name: NF4001_low_23
Description: NF4001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4001_low_23
NF4001_low_23
[»] chr2 (10 HSPs)
chr2 (1-240)||(6988615-6988870)
chr2 (145-218)||(15571608-15571681)
chr2 (145-218)||(18454420-18454493)
chr2 (141-212)||(12522845-12522916)
chr2 (145-218)||(18453236-18453309)
chr2 (156-218)||(18454234-18454296)
chr2 (145-218)||(14493175-14493248)
chr2 (143-218)||(12522985-12523060)
chr2 (158-209)||(18453577-18453628)
chr2 (145-218)||(18454068-18454141)
[»] chr6 (39 HSPs)
chr6 (141-212)||(639231-639302)
chr6 (141-212)||(639397-639468)
chr6 (143-219)||(640082-640158)
chr6 (145-218)||(29616515-29616588)
chr6 (141-212)||(29616140-29616211)
chr6 (141-212)||(34961918-34961989)
chr6 (145-218)||(30405516-30405589)
chr6 (145-212)||(2190888-2190955)
chr6 (148-218)||(638720-638790)
chr6 (141-207)||(2190543-2190609)
chr6 (141-218)||(30404787-30404864)
chr6 (142-218)||(30404974-30405051)
chr6 (143-212)||(30405143-30405212)
chr6 (147-218)||(1578088-1578159)
chr6 (143-218)||(7655505-7655580)
chr6 (145-212)||(12600783-12600850)
chr6 (145-196)||(29616683-29616734)
chr6 (155-218)||(34961406-34961469)
chr6 (141-198)||(639895-639951)
chr6 (155-212)||(1577608-1577665)
chr6 (145-218)||(30405702-30405775)
chr6 (160-212)||(30405345-30405397)
chr6 (145-212)||(24037058-24037125)
chr6 (153-212)||(34967725-34967784)
chr6 (141-179)||(2190737-2190775)
chr6 (157-218)||(7655690-7655751)
chr6 (157-218)||(7656043-7656104)
chr6 (145-218)||(30401582-30401655)
chr6 (141-218)||(34961732-34961809)
chr6 (145-209)||(2192094-2192158)
chr6 (159-218)||(639747-639806)
chr6 (164-218)||(1578271-1578325)
chr6 (155-197)||(12600959-12601001)
chr6 (141-187)||(29613736-29613782)
chr6 (143-212)||(7655343-7655412)
chr6 (145-182)||(29616330-29616367)
chr6 (145-218)||(34962108-34962181)
chr6 (148-212)||(1577924-1577988)
chr6 (145-209)||(24035784-24035848)
[»] chr1 (11 HSPs)
chr1 (141-218)||(48739442-48739519)
chr1 (141-218)||(48739610-48739687)
chr1 (141-218)||(24665752-24665829)
chr1 (145-217)||(24665918-24665990)
chr1 (143-218)||(41468036-41468111)
chr1 (143-218)||(41468456-41468531)
chr1 (143-218)||(41468276-41468351)
chr1 (141-197)||(48739796-48739852)
chr1 (164-218)||(24666103-24666157)
chr1 (156-197)||(48234533-48234574)
chr1 (174-218)||(48234385-48234429)
[»] chr7 (25 HSPs)
chr7 (155-218)||(8948160-8948223)
chr7 (141-218)||(44213590-44213667)
chr7 (141-207)||(13909982-13910048)
chr7 (145-212)||(13910327-13910394)
chr7 (145-212)||(13930377-13930444)
chr7 (141-218)||(13910137-13910214)
chr7 (155-218)||(35466998-35467061)
chr7 (140-201)||(8947463-8947524)
chr7 (155-212)||(8947829-8947886)
chr7 (147-218)||(15738216-15738287)
chr7 (156-218)||(8948327-8948389)
chr7 (141-187)||(13930539-13930585)
chr7 (145-218)||(13914408-13914480)
chr7 (155-212)||(15738710-15738767)
chr7 (145-218)||(35466822-35466895)
chr7 (155-212)||(35467164-35467221)
chr7 (155-200)||(35467330-35467375)
chr7 (156-218)||(8947295-8947357)
chr7 (145-209)||(13914931-13914995)
chr7 (145-212)||(13914579-13914646)
chr7 (163-218)||(13914776-13914831)
chr7 (148-218)||(8947119-8947189)
chr7 (164-218)||(15738050-15738104)
chr7 (141-218)||(35466652-35466729)
chr7 (148-212)||(15738387-15738451)
[»] chr8 (26 HSPs)
chr8 (148-218)||(23484138-23484208)
chr8 (145-218)||(23484693-23484766)
chr8 (145-207)||(23484321-23484383)
chr8 (141-207)||(23484503-23484569)
chr8 (145-218)||(124071-124144)
chr8 (145-218)||(124461-124534)
chr8 (141-207)||(16534682-16534748)
chr8 (145-218)||(34907567-34907639)
chr8 (145-212)||(124651-124718)
chr8 (141-212)||(32058767-32058838)
chr8 (145-218)||(23483783-23483856)
chr8 (141-218)||(23484875-23484952)
chr8 (163-218)||(23483967-23484022)
chr8 (145-212)||(32058933-32059000)
chr8 (145-212)||(34907222-34907289)
chr8 (141-218)||(23480053-23480130)
chr8 (145-218)||(34907401-34907474)
chr8 (145-212)||(16535027-16535094)
chr8 (145-212)||(32059524-32059591)
chr8 (141-218)||(124831-124908)
chr8 (140-209)||(32059361-32059430)
chr8 (141-172)||(9874270-9874301)
chr8 (143-218)||(32059093-32059168)
chr8 (141-207)||(9874436-9874502)
chr8 (141-179)||(16534876-16534914)
chr8 (145-209)||(16535872-16535936)
[»] chr4 (23 HSPs)
chr4 (145-218)||(13739966-13740039)
chr4 (145-218)||(13743239-13743312)
chr4 (143-218)||(15780571-15780646)
chr4 (145-212)||(43265197-43265264)
chr4 (141-218)||(43265359-43265436)
chr4 (145-218)||(43265712-43265785)
chr4 (145-209)||(43265043-43265107)
chr4 (145-212)||(13742876-13742943)
chr4 (145-209)||(15780782-15780846)
chr4 (145-200)||(13743425-13743480)
chr4 (145-212)||(15781317-15781383)
chr4 (163-212)||(43265564-43265613)
chr4 (145-218)||(43265878-43265951)
chr4 (155-218)||(47324588-47324651)
chr4 (145-212)||(47325078-47325145)
chr4 (155-218)||(47339384-47339447)
chr4 (145-212)||(47339874-47339941)
chr4 (156-218)||(47324091-47324153)
chr4 (156-218)||(47338887-47338949)
chr4 (141-218)||(15780944-15781021)
chr4 (163-212)||(15781169-15781218)
chr4 (145-218)||(47324412-47324485)
chr4 (145-218)||(47339208-47339281)
[»] scaffold0049 (7 HSPs)
scaffold0049 (145-218)||(5430-5503)
scaffold0049 (155-218)||(5254-5317)
scaffold0049 (141-218)||(5612-5689)
scaffold0049 (141-218)||(5763-5840)
scaffold0049 (158-218)||(5073-5133)
scaffold0049 (145-218)||(4874-4947)
scaffold0049 (150-218)||(5939-6007)
[»] chr3 (13 HSPs)
chr3 (145-218)||(49791194-49791267)
chr3 (141-218)||(49791835-49791912)
chr3 (155-211)||(11763327-11763383)
chr3 (163-218)||(11763501-11763556)
chr3 (155-208)||(11763825-11763878)
chr3 (140-212)||(51858248-51858319)
chr3 (151-218)||(11762971-11763038)
chr3 (155-218)||(11763141-11763204)
chr3 (145-212)||(49791028-49791095)
chr3 (148-218)||(51857885-51857955)
chr3 (156-218)||(51858080-51858142)
chr3 (155-212)||(49791651-49791708)
chr3 (155-198)||(11763659-11763702)
[»] chr5 (7 HSPs)
chr5 (141-212)||(11234921-11234992)
chr5 (145-212)||(11235255-11235322)
chr5 (145-212)||(22256610-22256677)
chr5 (164-218)||(11234747-11234801)
chr5 (147-218)||(11234581-11234652)
chr5 (150-196)||(11234437-11234483)
chr5 (141-179)||(22256459-22256497)
[»] scaffold0031 (3 HSPs)
scaffold0031 (145-212)||(82240-82307)
scaffold0031 (141-179)||(82089-82127)
scaffold0031 (145-209)||(83987-84051)
[»] scaffold0268 (3 HSPs)
scaffold0268 (141-207)||(4978-5044)
scaffold0268 (141-179)||(5172-5210)
scaffold0268 (145-212)||(5323-5390)


Alignment Details
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6988870 - 6988615
Alignment:
Q  1 cagaaatccaagctgcaaccaatgactttagcctaggtatgtcacatcgacactgtagattgaatatgtgttcattgcct---------------caggc 85  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||               |||||    
T  6988870 cagaaatccaagctgcaaccaatgactttagccaaggtatgtcacatcgacactttagattgaatatgtgctcattgcctgacacgtgttagtgtcaggc 6988771  T
Q  86 accgataaatttgattacattcaatcacttatgtgttcgcctgtgccggtgccgtttcaaagatttcaaaacgactgatcaaactcataactcttaccct 185  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6988770 accgataagtttgattatattcaatcacttatgtgttcacctgtgccggtgccgtttcaaagatttcaaaacgactgatcaaactcacaactcttaccct 6988671  T
Q  186 aattgaaagaatcttgtagtcaaagtagttggacctgtg-cggtgccgtgtctgtg 240  Q
    || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6988670 aaatgaaataatcttgtagtcaaagtagttggacctgtgccggtgccgtgtctgtg 6988615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 15571681 - 15571608
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  15571681 aagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 15571608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 18454493 - 18454420
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  18454493 aagatgtcataacgactcatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 18454420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 12522916 - 12522845
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||| ||||||||| ||| ||| ||||||    
T  12522916 ttcaaagatgtcaaaacgactgatcaaattcacaactcttaccctaactgaaagaattttggagtgaaagta 12522845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 18453309 - 18453236
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||| | |||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||    
T  18453309 aagatgtcataacgaatcatcaaactcacaactcttaccctaattgaaataatcttgcagtcaaagtacttgga 18453236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 18454296 - 18454234
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||||||| ||| |||||| |||||    
T  18454296 acgactggtcaaaatcacaactcttaccctaactgaaagaatcttggagtgaaagtacttgga 18454234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 14493248 - 14493175
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| |||| | ||||||||||||||| |||||||||||||  ||||||||||||  ||| |||||| |||||    
T  14493248 aagatgtcaagatgactgatcaaactcaaaactcttaccctacgtgaaagaatcttagagtgaaagtacttgga 14493175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 12523060 - 12522985
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||| |||||||||||||||||| || ||||||||||| ||| ||||  ||| ||| |||||| |||||    
T  12523060 caaagacttcagaacgactgatcaaactcaaaattcttaccctaactgacagaactttggagtgaaagtacttgga 12522985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 18453628 - 18453577
Alignment:
Q  158 gactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    |||| |||||||| | ||||||||||| |||||||||||||||| |||||||    
T  18453628 gactcatcaaacttacaactcttacccaaattgaaagaatcttgcagtcaaa 18453577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 18454141 - 18454068
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||||||  | ||||| | ||||||||||| || |||||||||  ||||||||||||| |||||    
T  18454141 aagatttcagaacgactctttaaacttacaactcttacccaaactgaaagaataatgtagtcaaagtacttgga 18454068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 639231 - 639302
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  639231 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaactgaaagaatcttgtagtcaaagta 639302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 639397 - 639468
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||    
T  639397 ttcaaagatttcaaaacgactgttcaaacttacaactcttaccctaactgaaagaatcttgtagtcaaagta 639468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 219
Target Start/End: Original strand, 640082 - 640158
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttggac 219  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||| |||||||||| |||||||||| ||||||    
T  640082 caaagatttcaaaacgactcatcaaactcacaactcttaccttaattggaagaatcttgaagtcaaagtacttggac 640158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 29616515 - 29616588
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||| |||| |||||    
T  29616515 aagatttcaaaacgactgatcaaactcacaactcttaccctaactaaaagaatcttggagtcagagtacttgga 29616588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 29616140 - 29616211
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||||||||||    
T  29616140 ttcaaatatttcaaaacgacttatcaaactcacaactcttaccctaactaaaagaatcttggagtcaaagta 29616211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 34961918 - 34961989
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| |||  ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  34961918 ttcaaagatgtcagcacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagta 34961989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 30405516 - 30405589
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  30405516 aagatgtcacaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 30405589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 2190955 - 2190888
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||||||||||||  |||||||||||||| | ||||||| ||| ||||||||||    
T  2190955 aagatttcaaaacgactgatcaaactcgcaactcttaccctaacttaaagaatattggagtcaaagta 2190888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 638720 - 638790
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||| ||||||  |||||||||||| |||||||||||||  |||||||||| |||||||||||||||||||    
T  638720 attttaaaacgggtgatcaaactcacaactcttaccctatctgaaagaatcgtgtagtcaaagtagttgga 638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 2190609 - 2190543
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| | ||||||| ||| |||||    
T  2190609 ttcaaagattttaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtca 2190543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 30404787 - 30404864
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||| || || |||| |||||    
T  30404787 ttcaaatatttcaaaacaacttatcaaactcacaactcttaccctaactgaaagaatcttggaggcagagtacttgga 30404864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 30404974 - 30405051
Alignment:
Q  142 tcaaagatttcaa-aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||| |||| ||||||| |||| ||||| |||||||||||||| |||||||||| || ||||||||||||||||    
T  30404974 tcaaagatgtcaataacgacttatcagactcacaactcttaccctaactgaaagaatcatggagtcaaagtagttgga 30405051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 30405143 - 30405212
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||| |||| ||||||| |||||||||| |||||||||||||| | ||||||||||| ||||||||||    
T  30405143 caaagacttcagaacgactaatcaaactcacaactcttaccctaactaaaagaatcttggagtcaaagta 30405212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 1578088 - 1578159
Alignment:
Q  147 gatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| |||||||  ||||| ||| ||||||||||| || |||||||||||||||||||||||| |||||    
T  1578088 gatttcataacgactcttcaaagtcacaactcttaccccaactgaaagaatcttgtagtcaaagtacttgga 1578159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 7655580 - 7655505
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||| ||||||  ||||||||||||||||| ||||||| |||||  ||||||||||||| |||||||||| |||||    
T  7655580 caaatatttcatcacgactgatcaaactcacaactcttgccctagctgaaagaatcttggagtcaaagtacttgga 7655505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 12600783 - 12600850
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| || ||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||    
T  12600783 aagatgtcataatgactgatcaaactcacagctcttaccataactgaaagaatcttgtagtcaaagta 12600850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 29616683 - 29616734
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaa 196  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  29616683 aagatttcaaaacgactgatgaaactcacaactcttaccctaactgaaagaa 29616734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 34961406 - 34961469
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||| | |||||||| |||||    
T  34961406 aacgactgatcaaactcacaactcttaccctaactaaaagaatcttggaatcaaagtacttgga 34961469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 639895 - 639951
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatc 198  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||    
T  639895 ttcaaagatttcgaaacgactgatcaaactcaaaactcttaccc-aactgaaagaatc 639951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 1577608 - 1577665
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||| |||| ||||||    
T  1577608 aacgactgatcagactcacaactcttaccctaactgaaagaatcttatagtgaaagta 1577665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 30405702 - 30405775
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||| |||||||| | |||||||||||||| ||||||||||||| || ||||||| |||||    
T  30405702 aagatgtcacaacgactaatcaaactgacaactcttaccctaactgaaagaatcttggaggcaaagtacttgga 30405775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 30405345 - 30405397
Alignment:
Q  160 ctgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||    
T  30405345 ctgatcaaactcacaactcttagcctaactgaaagaatcttggagtcaaagta 30405397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 24037058 - 24037125
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||||| ||||||  ||||||||||| || | ||||||| ||| ||||||||||    
T  24037058 aagatttcaaaacgactgattaaactcgcaactcttaccccaacttaaagaatattggagtcaaagta 24037125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 34967725 - 34967784
Alignment:
Q  153 aaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||| | |||| ||| ||||| ||||||||||||| ||||||||||    
T  34967725 aaaacgactgatcaaacttacaactattaacctaactgaaagaatcttggagtcaaagta 34967784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 2190775 - 2190737
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactct 179  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  2190775 ttcaaagatttcaaaacgactgatcaaactcacaactct 2190737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 7655751 - 7655690
Alignment:
Q  157 cgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||| ||||||| |||||  ||||||||||||| ||| |||||| |||||    
T  7655751 cgactgatcaaactcacaactcttgccctagctgaaagaatcttggagtgaaagtacttgga 7655690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 7656104 - 7656043
Alignment:
Q  157 cgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||| ||||||| |||||  |||||||| |||| |||||||||| |||||    
T  7656104 cgactgatcaaactcacaactcttgccctagctgaaagaaccttggagtcaaagtacttgga 7656043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 30401582 - 30401655
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||| |||||| ||| ||||||||||| || ||||||||| ||| |||||||||| |||||    
T  30401582 aagatgtcacaacgactaatcaaaatcacaactcttaccccaactgaaagaatgttggagtcaaagtatttgga 30401655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 34961732 - 34961809
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| || ||| |||| ||||||||||| | |||| ||||||||| | ||||||||||| |||||||||| |||||    
T  34961732 ttcaaatatgtcataacggctgatcaaacttacaactattaccctaactaaaagaatcttggagtcaaagtacttgga 34961809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 2192158 - 2192094
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||| | |||||||||| || |||| |||||| ||||||||| ||| |||||||    
T  2192158 aagatttcaaaacgaataatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaa 2192094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 639747 - 639806
Alignment:
Q  159 actgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||| | ||| | |||||| ||||||||||||| |||||||||| |||||    
T  639747 actgatcaaactcacatctcattccctaactgaaagaatcttggagtcaaagtacttgga 639806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 1578271 - 1578325
Alignment:
Q  164 tcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||||||| || || |||||||||| ||||||||||||| |||||    
T  1578271 tcaaactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttgga 1578325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 12600959 - 12601001
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaat 197  Q
    |||||||||||||||||| ||||||||| |||| |||||||||    
T  12600959 aacgactgatcaaactcacaactcttactctaactgaaagaat 12601001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 29613736 - 29613782
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaa 187  Q
    ||||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  29613736 ttcaaagatgtcataacgactaatcaaactcacaactcttaccctaa 29613782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 7655412 - 7655343
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||| ||||||  ||||||||||||||||| ||||||| | |||  | ||||||||||| ||||||||||    
T  7655412 caaatatttcatcacgactgatcaaactcacaactcttgctctagcttaaagaatcttggagtcaaagta 7655343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 29616330 - 29616367
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttac 182  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  29616330 aagatttcaaaacgactggtcaaactcacaactcttac 29616367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 34962108 - 34962181
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| | |||||| ||||||||| | ||||||||||||||  |||||||| | | |||||||||| |||||    
T  34962108 aagattttagaacgaccgatcaaacttacaactcttaccctaaccgaaagaatttgggagtcaaagtacttgga 34962181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 1577924 - 1577988
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||| |||||||  ||||| ||| ||||||| |||| | ||||||||||||||||| ||||||    
T  1577924 atttcagaacgactcttcaaagtcacaactctttccctcactgaaagaatcttgtagtgaaagta 1577988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 24035784 - 24035848
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||| | |||||||||| || ||||  ||||| ||||||||| ||| |||||||    
T  24035784 aagatttcaaaacgaataatcaaactcaaaattcttgacctaactgaaagaatattggagtcaaa 24035848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 48739442 - 48739519
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||| |||||    
T  48739442 ttcaaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttcgagtcaaagtacttgga 48739519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 48739610 - 48739687
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||||||||| |||||    
T  48739610 ttcaaagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagagtcttggagtcaaagtacttgga 48739687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 24665829 - 24665752
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||| ||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||    
T  24665829 ttcaaagatttcagaacgactcatcaaactcacaactcttagcctaactgaaagaatcttgtagtcaaagtacttgga 24665752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 24665990 - 24665918
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgg 217  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||| ||||    
T  24665990 aagatttcagaacgactgatcaaactcataactcttaccgtaattgaaagaatctagtagtgaaagtacttgg 24665918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 41468036 - 41468111
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||  ||||||||| ||||||| ||||||| |||||| | ||||||||||| |||||||||| |||||    
T  41468036 caaagatttcatcacgactgatgaaactcacaactcttgccctaactaaaagaatcttggagtcaaagtacttgga 41468111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 41468456 - 41468531
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||| | ||||||||||| ||| |||||| |||||    
T  41468456 caaagatttcatcacgactgatcaaactcacaactcttgccctaactaaaagaatcttggagttaaagtaattgga 41468531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 41468276 - 41468351
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||  ||||||||| | ||||| ||||||| |||||| | ||||||||||| |||||||||| |||||    
T  41468276 caaagatttcatcacgactgatgatactcacaactcttgccctaactaaaagaatcttggagtcaaagtacttgga 41468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 48739796 - 48739852
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaat 197  Q
    ||||||||| |||  |||||||||||||||||||| ||||||| ||| |||||||||    
T  48739796 ttcaaagatgtcagcacgactgatcaaactcataattcttaccataactgaaagaat 48739852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 24666157 - 24666103
Alignment:
Q  164 tcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||||||||||| || ||||||||||||  |||||||||| |||||    
T  24666157 tcaaactcacaactcttaccccaactgaaagaatcttagagtcaaagtacttgga 24666103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 48234533 - 48234574
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaat 197  Q
    ||||||||||||||||| |||||||||| ||| |||||||||    
T  48234533 acgactgatcaaactcacaactcttaccataactgaaagaat 48234574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 48234385 - 48234429
Alignment:
Q  174 aactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||| ||||||||||||| |||||||||| |||||    
T  48234385 aactcttactctaactgaaagaatcttggagtcaaagtacttgga 48234429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 8948160 - 8948223
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  8948160 aacgactgatcaaactcacaactcttaccctaattgaaagaatcttgtagtcaaagtacttgga 8948223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 44213590 - 44213667
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||  ||||||||| |||||    
T  44213590 ttcaaagatttcaaaacgactcatcaaactcataactcttaccctaactggaagaatcttgaggtcaaagtacttgga 44213667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 13910048 - 13909982
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||    
T  13910048 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaacttaaagaatattggagtca 13909982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 13910394 - 13910327
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| ||||||||||    
T  13910394 aagatttcaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtcaaagta 13910327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 13930377 - 13930444
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  13930377 aagatttcataacgactaatcaaactcagaactcttaccctaactgaaagaatcttggagtcaaagta 13930444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 13910214 - 13910137
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||||||| |||||||||| |||||||||| ||| | ||||||||||| ||||| |||| |||||    
T  13910214 ttcaaagatttcaaaacgactaatcaaactcacaactcttaccttaacttaaagaatcttggagtcagagtaattgga 13910137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 35466998 - 35467061
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| |||||||||  |||||||||||||| |||||||||||||||||||||||| |||||    
T  35466998 aacgactaatcaaactcgcaactcttaccctaactgaaagaatcttgtagtcaaagtacttgga 35467061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 8947463 - 8947524
Alignment:
Q  140 tttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttg 201  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||    
T  8947463 tttccaagatttcaaaacgactgatcaaactcacaactcttatcctaactgaaaaaatcttg 8947524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 8947829 - 8947886
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||    
T  8947829 aacgactgatcaaactcacaactcttaccttaactgaaagaatcttatagtcaaagta 8947886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 15738287 - 15738216
Alignment:
Q  147 gatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| |||||||  ||||| ||| ||||||||||| || |||||||||||||||||||||||| |||||    
T  15738287 gatttcataacgactcttcaaagtcacaactcttaccccaactgaaagaatcttgtagtcaaagtacttgga 15738216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 8948327 - 8948389
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||| | |||||| |||||    
T  8948327 acgactgatcaaactcacaactcttaccctaactgaaagaatattgtattgaaagtacttgga 8948389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 13930539 - 13930585
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaa 187  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  13930539 ttcaaagatgtcaaaacgactgatcaaactcacaactcttaccctaa 13930585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 13914480 - 13914408
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| |||||||||||||||||| |||||||||| ||| |||||| |||||||||| |||||| |||||    
T  13914480 aagatgtcataacgactgatcaaactcacaactcttaccataactgaaag-atcttgtagttaaagtacttgga 13914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 15738767 - 15738710
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||| |||| ||||||    
T  15738767 aacgactgatcagactcacaactcttaccctaactgaaagaatcttatagtgaaagta 15738710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 35466822 - 35466895
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||| |||| ||||| |||||||||||||| |||||||||| || |||||||||| |||||    
T  35466822 aagatgtcagaacgactcatcagactcagaactcttaccctaactgaaagaatcctgcagtcaaagtacttgga 35466895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 35467164 - 35467221
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||| ||| ||||||    
T  35467164 aacgactgatcaaactcacaactcttatcctaactgaaagaatcttgcagtgaaagta 35467221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 35467330 - 35467375
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatctt 200  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  35467330 aacgactgatcaaactcacaactcttaccctaactgaaagaatctt 35467375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 8947295 - 8947357
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||| ||| |||||| |||||    
T  8947295 acgactgatcaaactcacaactcttaccctatctgaacgaatcttggagtgaaagtacttgga 8947357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 13914995 - 13914931
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||| | |||||||||| || |||| |||||| ||||||||| ||| |||||||    
T  13914995 aagatttcaaaacgaataatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaa 13914931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 13914646 - 13914579
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| ||| ||| |||||||||| |||||||||| |||  |||||||||||| ||||||||||    
T  13914646 aagatgtcataacaacttatcaaactcacaactcttaccttaaccgaaagaatcttggagtcaaagta 13914579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 13914831 - 13914776
Alignment:
Q  163 atcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||| |||| ||||||||| ||||||||||||| ||| |||||| |||||    
T  13914831 atcaaactcacaacttttaccctaactgaaagaatcttgcagtaaaagtacttgga 13914776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 8947119 - 8947189
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||||||  |||||||||  ||||||| ||||| ||||||||||||| ||| |||||| |||||    
T  8947119 atttcagaacgactcttcaaactcacgactcttatcctaactgaaagaatcttggagtaaaagtacttgga 8947189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 15738104 - 15738050
Alignment:
Q  164 tcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||||||| || || |||||||||| ||||||||||||| |||||    
T  15738104 tcaaactcacaactcttatcccaactgaaagaatcatgtagtcaaagtacttgga 15738050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 35466652 - 35466729
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||| ||| ||| |||| ||||| |||||||||||||| ||||  || |||||||| |||||| |||||    
T  35466652 ttcaaagatgtcataactactcatcagactcacaactcttaccctaactgaacaaaccttgtagtgaaagtatttgga 35466729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 15738451 - 15738387
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||| |||||||  ||||| ||| ||||||| |||| | ||||||||||||||||| ||||||    
T  15738451 atttcagaacgactcttcaaagtcacaactctttccctcactgaaagaatcttgtagtgaaagta 15738387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 23484138 - 23484208
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||    
T  23484138 atttcaaaacgactgatcaaactcacaactcttaccataattgaaagaatcttggagtcaaagtacttgga 23484208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 23484693 - 23484766
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || ||||||| |||||    
T  23484693 aagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagacaaagtacttgga 23484766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 23484321 - 23484383
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  23484321 aagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagtca 23484383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 23484503 - 23484569
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||    
T  23484503 ttcaaagatttcaaaacgactgatctaactcacaactcttaccctaactgaaagaatcttggagtca 23484569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 124144 - 124071
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||||| |||||    
T  124144 aagatttcagaacgactgatcaaactcataactcttaccctgactgaaagaatcttgcagtgaaagtacttgga 124071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 124534 - 124461
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||| |||||||||| |||||    
T  124534 aagatttcaaaacaactgatcaaactcacaactcttaccctaactgaaataatcttggagtcaaagtacttgga 124461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 16534748 - 16534682
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||| |||||    
T  16534748 ttcaaagatttcaaaacgactgatcaaactcacaactcttaccctaacttaaagaatattggagtca 16534682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 34907567 - 34907639
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||| |||||||||| |||||    
T  34907567 aagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaag-atcttggagtcaaagtacttgga 34907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 124718 - 124651
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| |||||||||||||||||| |||||||||||||| |||||||| | || ||||||||||    
T  124718 aagatttcagaacgactgatcaaactcacaactcttaccctaactgaaagaaccctggagtcaaagta 124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 32058838 - 32058767
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| |||||||||||||||||||||| |||||| |||| || ||||||||||||| ||| ||||||    
T  32058838 ttcaaagatgtcaaaacgactgatcaaactcacaactctaaccccaactgaaagaatcttggagtaaaagta 32058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 23483783 - 23483856
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| | ||| ||| ||||||||||||||||||||||||| | ||||||||||||||| |||||| |||||    
T  23483783 aagattttagaacaactcatcaaactcataactcttaccctaactaaaagaatcttgtagttaaagtacttgga 23483856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 23484875 - 23484952
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||| | |  |||||||||| |||||||||| |||||    
T  23484875 ttcaaagatttcaaagcgactcatcaaactcacaactcttaccctcactagaagaatcttggagtcaaagtacttgga 23484952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 23483967 - 23484022
Alignment:
Q  163 atcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||| |||||    
T  23483967 atcaaactcacaactcttacccttattaaaagaatcttgtagtcaaagtacttgga 23484022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 32059000 - 32058933
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| ||||||| | |||||||| |||||||||||||| ||||||||||||  ||||||||||    
T  32059000 aagatttcataacgactaaacaaactcagaactcttaccctaactgaaagaatctttgagtcaaagta 32058933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 34907222 - 34907289
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||| | ||| |||||||||||| |||||||| ||||| ||||||||||||| ||||||||||    
T  34907222 aagatttcacagcgattgatcaaactcacaactcttaacctaactgaaagaatcttggagtcaaagta 34907289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 23480053 - 23480130
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||||| | |  |||||||||| |||||||||| |||||    
T  23480053 ttcaaagatttcaaagcgactcatcaaactcacaacttttacccttactagaagaatcttggagtcaaagtacttgga 23480130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 34907401 - 34907474
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||| | |||||||||||| || |||| |||||  ||||||||||||| |||||||||| |||||    
T  34907401 aagatttcaaaacaattgatcaaactcaaaattcttgccctacctgaaagaatcttggagtcaaagtacttgga 34907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 16535094 - 16535027
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | ||||||| ||  ||||||||||    
T  16535094 aagatttcaaaacgactaatcaaactcgcaactcttaccctaacttaaagaatattagagtcaaagta 16535027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 32059591 - 32059524
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||| || ||||||| |||||||||| || ||||||||||| ||||||||| ||| ||||||||||    
T  32059591 aagattgcagaacgactcatcaaactcacaaatcttaccctaactgaaagaatattggagtcaaagta 32059524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 124908 - 124831
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||| ||| ||| |||||||||| ||||||| ||||||  |||||||||||| |||||| ||| |||||    
T  124908 ttcaaagatgtcataacaacttatcaaactcacaactcttgccctaacagaaagaatcttggagtcaatgtacttgga 124831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 209
Target Start/End: Complemental strand, 32059430 - 32059361
Alignment:
Q  140 tttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    |||||||||| | | |||| || |||||||||| |||||||||| ||| ||||||||||||| |||||||    
T  32059430 tttcaaagatgtaagaacgtcttatcaaactcacaactcttaccttaactgaaagaatcttggagtcaaa 32059361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 172
Target Start/End: Original strand, 9874270 - 9874301
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactca 172  Q
    ||||||||||||||||||||||||||||||||    
T  9874270 ttcaaagatttcaaaacgactgatcaaactca 9874301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 32059168 - 32059093
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||| |||||||||||||||||| || ||||||||||| ||| ||||  ||| ||| |||||| |||||    
T  32059168 caaagacttcagaacgactgatcaaactcaaaattcttaccctaactgacagaactttggagtgaaagtacttgga 32059093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 9874436 - 9874502
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    |||||| ||||||||||||||  ||||||||| ||||||||||| || | ||||||| ||| |||||    
T  9874436 ttcaaatatttcaaaacgactcctcaaactcacaactcttacccgaacttaaagaatattggagtca 9874502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 16534914 - 16534876
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactct 179  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  16534914 ttcaaagatttaaaaacgactgatcaaactcacaactct 16534876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 16535936 - 16535872
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||| | ||||| |||| || |||| |||||| ||||||||| ||| |||||||    
T  16535936 aagatttcaaaacgaataatcaagctcaaaattcttgccctaactgaaagaatattggagtcaaa 16535872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 13739966 - 13740039
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  13739966 aagatttcaaaacgactaatcaaactcacaactcttaccctaactgaaagaatcttggagtcaaagtacttgga 13740039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 13743239 - 13743312
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||| || |||| |||||| ||||||||||||| |||||||||| |||||    
T  13743239 aagatttcaaaacgactgatcaaactcaaaattcttgccctaactgaaagaatcttggagtcaaagtacttgga 13743312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 15780571 - 15780646
Alignment:
Q  143 caaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||  |||||| || |||||||||||||| ||||||||| ||| |||||||||| |||||    
T  15780571 caaagatttcaaaacgacttttcaaacgcacaactcttaccctaactgaaagaattttggagtcaaagtacttgga 15780646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 43265197 - 43265264
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||||||| |||||||||| || |||| |||||| ||||||||||||| ||||||||||    
T  43265197 aagatttcaaaacgactaatcaaactcaaaattcttgccctaactgaaagaatcttggagtcaaagta 43265264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 43265359 - 43265436
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||| |||||||||||||||||| |||| |||| |||| ||||||||||||| ||| |||||| |||||    
T  43265359 ttcaaagatgtcagaacgactgatcaaactcacaacttttacgctaactgaaagaatcttgcagtgaaagtacttgga 43265436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 43265712 - 43265785
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| ||||||||||||||| || | |||||||| ||| |||||||||||||||||||||||| |||||    
T  43265712 aagatgtcataacgactgatcaaacgcacagctcttaccataactgaaagaatcttgtagtcaaagtacttgga 43265785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 43265043 - 43265107
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||| ||| |||||||||||||||||| |||||||||||||| ||||||||||||  |||||||    
T  43265043 aagatatcagaacgactgatcaaactcacaactcttaccctaactgaaagaatcttagagtcaaa 43265107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 13742876 - 13742943
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||| |||||||||||||||| |||||||| ||||| | |||||| |||| ||||||||||    
T  13742876 aagatttcaaagcgactgatcaaactcacaactcttaacctaactaaaagaaccttggagtcaaagta 13742943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 15780782 - 15780846
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||||| |||||||||| || |||| |||||| ||||||||| ||| |||||||    
T  15780782 aagatttcaaaacgactaatcaaactcaaaattcttgccctaactgaaagaatattggagtcaaa 15780846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 13743425 - 13743480
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatctt 200  Q
    |||||| || |||||||||||||||||| |||||||| ||||| ||||||||||||    
T  13743425 aagattccacaacgactgatcaaactcacaactcttaacctaactgaaagaatctt 13743480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 15781317 - 15781383
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| |||||||||| ||||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  15781317 aagatgtcataacgactgattaaactcacaactcttaccataactgaaaga-tcttgtagtcaaagta 15781383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 43265564 - 43265613
Alignment:
Q  163 atcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||| |||||||||| |||  |||||||||||||||||||||||    
T  43265564 atcaaactcacaactcttaccttaaccgaaagaatcttgtagtcaaagta 43265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 43265878 - 43265951
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| |||||||||||||||||| ||| ||||| |||| ||||||||| ||||| | |||||| |||||    
T  43265878 aagatgtcataacgactgatcaaactcacaacgcttactctaactgaaagaatattgtattgaaagtacttgga 43265951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 47324588 - 47324651
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| ||||||||||||||| ||||| ||| | ||||||||||| ||| |||||| |||||    
T  47324588 aacgactcatcaaactcataacttttaccttaactcaaagaatcttgcagtgaaagtacttgga 47324651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 47325078 - 47325145
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| ||||||| |||| ||||| |||||||||||||| | ||||||||||| ||| ||||||    
T  47325078 aagatgtcataacgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagta 47325145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 47339384 - 47339447
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| ||||||||||||||| ||||| ||| | ||||||||||| ||| |||||| |||||    
T  47339384 aacgactcatcaaactcataacttttaccttaactcaaagaatcttgcagtgaaagtacttgga 47339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 47339874 - 47339941
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| ||||||| |||| ||||| |||||||||||||| | ||||||||||| ||| ||||||    
T  47339874 aagatgtcataacgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagta 47339941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 47324091 - 47324153
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||| ||||| |||||||||||||| | ||||||||||| ||| |||||| |||||    
T  47324091 acgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttgga 47324153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 47338887 - 47338949
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||| ||||| |||||||||||||| | ||||||||||| ||| |||||| |||||    
T  47338887 acgactcatcagactcacaactcttaccctaactcaaagaatcttgcagtgaaagtacttgga 47338949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 15780944 - 15781021
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||| ||  ||| |||||||||  |||| ||||||||| ||||||||||||| ||| |||||| |||||    
T  15780944 ttcaaagatgtcagaataactaatcaaactcgcaacttttaccctaactgaaagaatcttgcagtgaaagtacttgga 15781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 15781169 - 15781218
Alignment:
Q  163 atcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||| |||||||||| |||  |||||||||||| ||||||||||    
T  15781169 atcaaactcacaactcttaccttaaccgaaagaatcttggagtcaaagta 15781218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 47324412 - 47324485
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| || ||||  ||||||||| |||||||||||  | | |||||||| ||||||||||||| |||||    
T  47324412 aagatttcagaatgactcttcaaactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttgga 47324485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 47339208 - 47339281
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| || ||||  ||||||||| |||||||||||  | | |||||||| ||||||||||||| |||||    
T  47339208 aagatttcagaatgactcttcaaactcacaactcttacccagactaaaagaatcatgtagtcaaagtacttgga 47339281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 5430 - 5503
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| || || |||| |||||    
T  5430 aagatttcaaaacgactgatcaaactcacaactcttaccctaactgaaagaatcttggagacagagtacttgga 5503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 5254 - 5317
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||    
T  5254 aacgattgatcaaactcacaactcttaccctaattgaaagaatcttggagtcagagtatttgga 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 5612 - 5689
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| ||| ||| ||| |||||||||| |||||| ||||||| |||||||||| || ||||||||||||||||    
T  5612 ttcaaagatgtcataacaacttatcaaactcacaactctcaccctaactgaaagaatcctggagtcaaagtagttgga 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 5763 - 5840
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||| |||| ||||||| |  |||||||||||||| ||||||||||||  |||||||||| |||||    
T  5763 ttcaaagatttcaaaatgactaatcaaacacgcaactcttaccctaactgaaagaatcttagagtcaaagtatttgga 5840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 5073 - 5133
Alignment:
Q  158 gactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||| |||||    
T  5073 gactgatcaaactcacaactcttaccctaactgaaagaatcttggagtcagagtacttgga 5133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 4874 - 4947
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||||| |||||||  |||| |||||||||  ||||||||| || |||||||||| |||||    
T  4874 aagatttcaaaacgactgaacaaactccaaacttttaccctaaccgaaagaatcatggagtcaaagtacttgga 4947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 5939 - 6007
Alignment:
Q  150 ttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||| |||||||||||||||||| |||||||||||||| | ||||| ||||| ||| |||||| |||||    
T  5939 ttcacaacgactgatcaaactcacaactcttaccctaactcaaagattcttgcagtgaaagtacttgga 6007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 49791194 - 49791267
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||| ||| |||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||| |||||    
T  49791194 aagatgtcataacgactgatcaaactcacaactcttactataactgaaagaatcttgtagtcaaagtacttgga 49791267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 49791835 - 49791912
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||  ||||||||||||  ||| |||||| |||||    
T  49791835 ttcaaagatgtcaagacgactgatcaaactcaaaactcttaccctacgtgaaagaatcttagagtgaaagtacttgga 49791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 11763327 - 11763383
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagt 211  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||| |||||||||    
T  11763327 aacgactgatcaaactcacaactcttaccctaactgaaagaaacttgcagtcaaagt 11763383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 11763501 - 11763556
Alignment:
Q  163 atcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  11763501 atcaaactcacaactcttaccctaagtgaaagaatcttgcagtcaaagtacttgga 11763556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 11763825 - 11763878
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaa 208  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||| ||||||    
T  11763825 aacgactgatcaaactcacaactcttaccctaactcaaagaatcttgcagtcaa 11763878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 51858248 - 51858319
Alignment:
Q  140 tttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||| | ||| ||||||| ||| ||||||    
T  51858248 tttccaagatttcaaaacgactgatcaaactcacaactcttatcctaact-aaaaaatcttgaagtgaaagta 51858319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 11762971 - 11763038
Alignment:
Q  151 tcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| || | ||||||| || |||||| |||| ||||||||||||| ||||||||||||||||    
T  11762971 tcaaaacgagtggtgaaactcaaaattcttactctaactgaaagaatcttggagtcaaagtagttgga 11763038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 11763141 - 11763204
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||||||||||||| | || ||||||||||| ||||||||||||| ||| |||||| |||||    
T  11763141 aacgactgatcaaactaaaaattcttaccctaactgaaagaatcttgcagtgaaagtacttgga 11763204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 212
Target Start/End: Original strand, 49791028 - 49791095
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| ||| |||||||||||||| |||||||||| |||  |||||||||||| ||||||||||    
T  49791028 aagatgtcataacaactgatcaaactcacaactcttaccttaaccgaaagaatcttgcagtcaaagta 49791095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 51857885 - 51857955
Alignment:
Q  148 atttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    |||||| |||||||  |||||||||  ||||||||||||| ||||| ||||||| |||||||||| |||||    
T  51857885 atttcagaacgactcttcaaactcacgactcttaccctaactgaaataatcttggagtcaaagtacttgga 51857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 51858080 - 51858142
Alignment:
Q  156 acgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||||||||||| |||||||||||||  |||| |||||||| ||| |||||| |||||    
T  51858080 acgactgatcaaactcacaactcttaccctagctgaacgaatcttggagtgaaagtacttgga 51858142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 49791651 - 49791708
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||| |||||||||||||| | |||||||| |  ||||||||||    
T  49791651 aacgactgatcaaactcacaactcttaccctaactaaaagaatcctcgagtcaaagta 49791708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 11763659 - 11763702
Alignment:
Q  155 aacgactgatcaaactcataactcttaccctaattgaaagaatc 198  Q
    |||||||||||||||||| |||||||||| ||| ||||||||||    
T  11763659 aacgactgatcaaactcacaactcttaccttaactgaaagaatc 11763702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 11234992 - 11234921
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||||||| |||||||||||||| ||||||| |||||  ||||| ||||||| ||||||||||    
T  11234992 ttcaaagatttcaaaactactgatcaaactcacaactctttccctagctgaaataatcttggagtcaaagta 11234921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 11235322 - 11235255
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||| ||| |||||| ||||||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  11235322 aagatgtcagaacgaccgatcaaactcacaacgcttaccctaactgaaagaatcttggagtcaaagta 11235255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 22256677 - 22256610
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||||||| |||||||||  |||||||||||||| | ||||||| ||| ||||||||||    
T  22256677 aagatttcaaaacgacttatcaaactcgcaactcttaccctaacttaaagaatattggagtcaaagta 22256610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 11234801 - 11234747
Alignment:
Q  164 tcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||    
T  11234801 tcaaactcacaactcttaccctaactgaaagaatcatgtagtcaaagtacttgga 11234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 11234652 - 11234581
Alignment:
Q  147 gatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagtagttgga 218  Q
    ||||||| |||||||  ||||| ||| ||||||||||| || |||||||||||| |||||||| || |||||    
T  11234652 gatttcagaacgactcttcaaagtcacaactcttaccccaactgaaagaatcttatagtcaaaatacttgga 11234581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 11234483 - 11234437
Alignment:
Q  150 ttcaaaacgactgatcaaactcataactcttaccctaattgaaagaa 196  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||||    
T  11234483 ttcagaacgacttatcaaactgacaactcttaccctaattgaaagaa 11234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 22256497 - 22256459
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactct 179  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  22256497 ttcaaagacttcaaaacgactgatcaaactcacaactct 22256459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 82307 - 82240
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    |||||||||||||||||||||||||||  |||||||||||||| | ||||||| ||| ||||| ||||    
T  82307 aagatttcaaaacgactgatcaaactcgcaactcttaccctaacttaaagaatattggagtcacagta 82240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 82127 - 82089
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactct 179  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  82127 ttcaaagacttcaaaacgactgatcaaactcacaactct 82089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 83987 - 84051
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaa 209  Q
    ||||||||||||||| | |||||||||| || ||||  ||||| ||||||||| ||| |||||||    
T  83987 aagatttcaaaacgaataatcaaactcaaaattcttgacctaactgaaagaatattggagtcaaa 84051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 5044 - 4978
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtca 207  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| || | ||||||| ||| |||||    
T  5044 ttcaaatatttcaaaacgactgatcaaactcacaactcttacccgaacttaaagaatattggagtca 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 5210 - 5172
Alignment:
Q  141 ttcaaagatttcaaaacgactgatcaaactcataactct 179  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5210 ttcaaagatttcaaaacgactgatcaaactcataactct 5172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 5390 - 5323
Alignment:
Q  145 aagatttcaaaacgactgatcaaactcataactcttaccctaattgaaagaatcttgtagtcaaagta 212  Q
    ||||||||||||| |||||||||||||  |||| ||||||| | | ||||||| ||| ||||||||||    
T  5390 aagatttcaaaacaactgatcaaactcgcaacttttaccctgacttaaagaatattggagtcaaagta 5323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University