View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4001_low_27 (Length: 242)
Name: NF4001_low_27
Description: NF4001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4001_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 3205563 - 3205740
Alignment:
| Q |
51 |
gagagagatgatgatgataaagaaattctaaatatcctataaaatttgagttggtttcacatagtgggtggttttaacttctagtattgatctgtctttt |
150 |
Q |
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| T |
3205563 |
gagagagatgatgatgataaagaaattctaaatatcctataaaatttgagttggtttcacatagtgggtggttttaacttctagtattgatctgtctttt |
3205662 |
T |
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| Q |
151 |
gaagatcgagaaagaatatagatgtgcttattgtaccgttgtggtggaggttgatacttcacgatgtatgagaattgt |
228 |
Q |
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| T |
3205663 |
gaagatcgagaaagaatatagatgtgcttgttgtaccgttgtggtggaggttgatccttcacgatgtatgagaattgt |
3205740 |
T |
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