View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4005_high_8 (Length: 586)

Name: NF4005_high_8
Description: NF4005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4005_high_8
NF4005_high_8
[»] chr4 (40 HSPs)
chr4 (368-576)||(53658629-53658838)
chr4 (16-119)||(53659026-53659129)
chr4 (168-318)||(53658826-53658977)
chr4 (205-327)||(30918919-30919041)
chr4 (274-327)||(14946028-14946081)
chr4 (198-327)||(49166640-49166769)
chr4 (205-328)||(31226432-31226554)
chr4 (205-327)||(18509985-18510106)
chr4 (205-325)||(41325466-41325587)
chr4 (205-327)||(22853964-22854087)
chr4 (205-327)||(7913364-7913485)
chr4 (205-327)||(21507827-21507949)
chr4 (274-327)||(3652341-3652394)
chr4 (274-327)||(17696316-17696369)
chr4 (205-327)||(50773291-50773412)
chr4 (275-327)||(12388156-12388208)
chr4 (274-327)||(14121498-14121551)
chr4 (274-327)||(32681949-32682002)
chr4 (205-250)||(55483795-55483840)
chr4 (205-253)||(4102789-4102837)
chr4 (275-327)||(39133156-39133208)
chr4 (205-303)||(29104161-29104259)
chr4 (276-327)||(49296253-49296304)
chr4 (277-327)||(16589054-16589104)
chr4 (274-327)||(26040758-26040812)
chr4 (196-234)||(39534056-39534094)
chr4 (205-250)||(32633-32678)
chr4 (205-250)||(3849825-3849870)
chr4 (205-250)||(17697156-17697201)
chr4 (205-250)||(19675847-19675892)
chr4 (274-327)||(23184827-23184879)
chr4 (276-325)||(24675352-24675401)
chr4 (205-234)||(39702460-39702489)
chr4 (274-327)||(42056049-42056102)
chr4 (205-250)||(49236537-49236582)
chr4 (276-313)||(50604137-50604174)
chr4 (198-234)||(23943882-23943918)
chr4 (274-326)||(30409358-30409410)
chr4 (274-318)||(36395481-36395525)
chr4 (205-257)||(42802565-42802617)
[»] chr6 (28 HSPs)
chr6 (205-327)||(2270454-2270576)
chr6 (205-327)||(17158365-17158487)
chr6 (197-327)||(21544124-21544254)
chr6 (205-327)||(16659714-16659834)
chr6 (205-327)||(26475765-26475886)
chr6 (205-326)||(34414523-34414645)
chr6 (274-327)||(9676472-9676525)
chr6 (276-327)||(22495951-22496002)
chr6 (205-327)||(686543-686664)
chr6 (205-327)||(1227678-1227800)
chr6 (274-327)||(12292933-12292986)
chr6 (274-327)||(16119764-16119817)
chr6 (195-250)||(6176684-6176739)
chr6 (276-327)||(9234917-9234968)
chr6 (277-327)||(13729188-13729238)
chr6 (200-250)||(13788038-13788088)
chr6 (200-250)||(13796657-13796707)
chr6 (277-327)||(26882150-26882200)
chr6 (205-250)||(2965810-2965855)
chr6 (205-250)||(4408106-4408151)
chr6 (205-250)||(6176930-6176975)
chr6 (202-255)||(10629825-10629878)
chr6 (205-234)||(15543102-15543131)
chr6 (274-327)||(18592081-18592134)
chr6 (205-250)||(18699237-18699282)
chr6 (205-250)||(19591538-19591583)
chr6 (197-234)||(26241270-26241307)
chr6 (274-327)||(32216992-32217045)
[»] chr5 (38 HSPs)
chr5 (205-327)||(22756316-22756438)
chr5 (200-327)||(11721262-11721389)
chr5 (205-327)||(25962804-25962925)
chr5 (198-327)||(7577944-7578073)
chr5 (205-325)||(41123398-41123518)
chr5 (205-327)||(4413929-4414050)
chr5 (196-327)||(23159459-23159590)
chr5 (205-327)||(21039867-21039988)
chr5 (205-327)||(31312705-31312826)
chr5 (196-327)||(12148160-12148290)
chr5 (205-327)||(6897036-6897158)
chr5 (275-327)||(31567704-31567756)
chr5 (277-327)||(17885955-17886005)
chr5 (277-327)||(25233878-25233928)
chr5 (277-327)||(25298038-25298088)
chr5 (274-327)||(28796417-28796470)
chr5 (274-327)||(31920130-31920183)
chr5 (274-327)||(34309562-34309615)
chr5 (274-327)||(37217455-37217508)
chr5 (274-323)||(38874593-38874642)
chr5 (274-329)||(4561853-4561908)
chr5 (276-327)||(6117658-6117709)
chr5 (201-244)||(7709714-7709757)
chr5 (195-234)||(10542303-10542342)
chr5 (205-327)||(30916485-30916606)
chr5 (205-250)||(1950042-1950087)
chr5 (205-250)||(13006658-13006703)
chr5 (205-250)||(16867762-16867807)
chr5 (205-250)||(22833639-22833684)
chr5 (277-318)||(25233701-25233742)
chr5 (277-318)||(25297861-25297902)
chr5 (205-250)||(26524631-26524676)
chr5 (205-250)||(29989703-29989748)
chr5 (205-250)||(32637466-32637511)
chr5 (205-250)||(38031958-38032003)
chr5 (274-327)||(42097908-42097961)
chr5 (206-250)||(5105105-5105149)
chr5 (275-327)||(40765455-40765507)
[»] chr2 (33 HSPs)
chr2 (205-327)||(33218577-33218699)
chr2 (205-327)||(9419751-9419873)
chr2 (205-327)||(38127765-38127886)
chr2 (205-327)||(38949858-38949980)
chr2 (198-327)||(1975734-1975862)
chr2 (207-327)||(43830754-43830874)
chr2 (206-327)||(42794013-42794135)
chr2 (274-327)||(39373064-39373117)
chr2 (205-327)||(15543965-15544088)
chr2 (277-327)||(7318165-7318215)
chr2 (205-327)||(19272664-19272785)
chr2 (205-327)||(25103987-25104109)
chr2 (205-327)||(34831493-34831615)
chr2 (274-327)||(16303873-16303926)
chr2 (274-327)||(18048887-18048940)
chr2 (282-327)||(18756601-18756646)
chr2 (274-327)||(19253470-19253523)
chr2 (274-327)||(22846231-22846284)
chr2 (205-250)||(27926935-27926980)
chr2 (196-250)||(5513476-5513530)
chr2 (277-327)||(17188872-17188922)
chr2 (274-327)||(874424-874477)
chr2 (274-327)||(7008025-7008078)
chr2 (205-250)||(8224391-8224436)
chr2 (205-250)||(20962282-20962327)
chr2 (197-234)||(27197738-27197775)
chr2 (197-234)||(27853165-27853202)
chr2 (205-250)||(34963591-34963636)
chr2 (205-250)||(36202122-36202167)
chr2 (274-327)||(36525346-36525399)
chr2 (206-250)||(3596652-3596696)
chr2 (274-326)||(16204560-16204612)
chr2 (205-249)||(16303624-16303668)
[»] chr1 (25 HSPs)
chr1 (200-327)||(5457078-5457204)
chr1 (205-327)||(26190732-26190854)
chr1 (205-325)||(5931962-5932083)
chr1 (274-327)||(22387427-22387480)
chr1 (205-327)||(9209575-9209698)
chr1 (200-327)||(26399108-26399234)
chr1 (205-327)||(21770756-21770878)
chr1 (274-327)||(23161896-23161949)
chr1 (274-327)||(47231187-47231240)
chr1 (205-257)||(17213307-17213359)
chr1 (274-326)||(27665987-27666039)
chr1 (199-250)||(14910085-14910136)
chr1 (200-250)||(8262741-8262791)
chr1 (205-327)||(16420914-16421036)
chr1 (205-250)||(3787241-3787286)
chr1 (205-250)||(8264069-8264114)
chr1 (205-250)||(15734476-15734521)
chr1 (197-250)||(17889517-17889570)
chr1 (205-250)||(29525860-29525905)
chr1 (205-246)||(44914375-44914416)
chr1 (276-329)||(46529010-46529063)
chr1 (205-250)||(51237964-51238009)
chr1 (275-327)||(6284430-6284482)
chr1 (202-250)||(16985189-16985237)
chr1 (202-250)||(32116408-32116456)
[»] chr3 (37 HSPs)
chr3 (205-327)||(52839551-52839673)
chr3 (205-327)||(5572205-5572327)
chr3 (205-327)||(13041615-13041737)
chr3 (205-327)||(13049692-13049814)
chr3 (205-327)||(22817883-22818005)
chr3 (204-327)||(14004516-14004638)
chr3 (205-327)||(300169-300291)
chr3 (205-327)||(19111192-19111313)
chr3 (274-327)||(3505252-3505305)
chr3 (274-329)||(28735513-28735568)
chr3 (274-313)||(48689175-48689214)
chr3 (203-265)||(31293453-31293515)
chr3 (205-327)||(32721759-32721881)
chr3 (205-250)||(7014966-7015011)
chr3 (274-327)||(13439816-13439869)
chr3 (274-327)||(14870182-14870235)
chr3 (205-327)||(7670491-7670611)
chr3 (204-250)||(10265491-10265537)
chr3 (196-234)||(52866214-52866252)
chr3 (205-250)||(5047405-5047450)
chr3 (205-250)||(7731272-7731317)
chr3 (205-250)||(9268575-9268620)
chr3 (205-250)||(13207492-13207537)
chr3 (274-327)||(16897340-16897393)
chr3 (205-250)||(21015242-21015287)
chr3 (205-250)||(25484118-25484163)
chr3 (205-250)||(34519879-34519924)
chr3 (205-250)||(37585638-37585683)
chr3 (274-327)||(38703236-38703289)
chr3 (205-250)||(40004113-40004158)
chr3 (205-250)||(48629532-48629577)
chr3 (205-250)||(54014559-54014604)
chr3 (205-249)||(5154723-5154767)
chr3 (202-242)||(14154779-14154818)
chr3 (274-326)||(14155029-14155081)
chr3 (283-327)||(17030608-17030652)
chr3 (275-327)||(31293704-31293756)
[»] chr8 (45 HSPs)
chr8 (206-327)||(41509633-41509754)
chr8 (199-327)||(32684814-32684942)
chr8 (200-327)||(12478570-12478697)
chr8 (198-327)||(24768533-24768662)
chr8 (205-327)||(38711874-38711995)
chr8 (205-327)||(23389022-23389142)
chr8 (205-327)||(11830177-11830299)
chr8 (277-327)||(13572613-13572663)
chr8 (205-327)||(34227329-34227450)
chr8 (274-327)||(24331580-24331633)
chr8 (198-250)||(28004635-28004687)
chr8 (198-250)||(28061937-28061989)
chr8 (274-326)||(38703850-38703902)
chr8 (205-322)||(2873704-2873820)
chr8 (274-349)||(13558570-13558649)
chr8 (286-327)||(23245573-23245614)
chr8 (205-250)||(26253006-26253051)
chr8 (274-327)||(31974942-31974995)
chr8 (274-327)||(36637063-36637116)
chr8 (205-250)||(40628412-40628457)
chr8 (274-326)||(32393381-32393433)
chr8 (198-250)||(34821648-34821700)
chr8 (274-313)||(3156133-3156172)
chr8 (276-327)||(5642781-5642832)
chr8 (276-327)||(5644722-5644773)
chr8 (195-234)||(28889019-28889058)
chr8 (277-327)||(5566735-5566785)
chr8 (208-250)||(17750093-17750135)
chr8 (208-250)||(17759080-17759122)
chr8 (277-327)||(27637320-27637370)
chr8 (205-250)||(116619-116664)
chr8 (205-250)||(5566484-5566529)
chr8 (196-253)||(9305733-9305789)
chr8 (205-250)||(13200486-13200531)
chr8 (199-252)||(15935715-15935767)
chr8 (205-250)||(17749863-17749908)
chr8 (274-327)||(18029682-18029735)
chr8 (205-250)||(22981047-22981092)
chr8 (205-250)||(27418150-27418195)
chr8 (274-327)||(30872647-30872700)
chr8 (205-250)||(34663552-34663597)
chr8 (274-327)||(35990798-35990851)
chr8 (205-250)||(40785243-40785288)
chr8 (198-246)||(4334997-4335044)
chr8 (205-249)||(29579104-29579148)
[»] chr7 (46 HSPs)
chr7 (198-327)||(5864697-5864826)
chr7 (205-327)||(21444117-21444238)
chr7 (200-327)||(442531-442658)
chr7 (205-327)||(13263871-13263992)
chr7 (205-327)||(15720931-15721053)
chr7 (205-327)||(35158185-35158306)
chr7 (205-327)||(17155610-17155731)
chr7 (274-327)||(20055072-20055125)
chr7 (274-327)||(26254809-26254862)
chr7 (274-327)||(30632068-30632121)
chr7 (274-327)||(31307921-31307974)
chr7 (274-327)||(36374216-36374269)
chr7 (275-327)||(12005515-12005567)
chr7 (199-250)||(21907534-21907585)
chr7 (277-327)||(3401875-3401925)
chr7 (205-327)||(21522021-21522143)
chr7 (205-327)||(47370154-47370276)
chr7 (205-250)||(29105587-29105632)
chr7 (274-327)||(40938186-40938239)
chr7 (274-327)||(43707178-43707231)
chr7 (198-250)||(3333028-3333080)
chr7 (275-323)||(38130906-38130954)
chr7 (195-234)||(43741971-43742010)
chr7 (198-244)||(813662-813708)
chr7 (205-303)||(5864446-5864544)
chr7 (205-327)||(14187845-14187967)
chr7 (206-244)||(22317537-22317575)
chr7 (196-234)||(47668121-47668159)
chr7 (282-327)||(11576822-11576867)
chr7 (205-250)||(11666758-11666803)
chr7 (205-250)||(11684228-11684273)
chr7 (197-234)||(22947621-22947658)
chr7 (205-250)||(23775130-23775175)
chr7 (205-250)||(24919907-24919952)
chr7 (197-250)||(28311343-28311396)
chr7 (197-234)||(34116472-34116509)
chr7 (205-250)||(34348173-34348218)
chr7 (205-250)||(37101549-37101594)
chr7 (274-327)||(38192815-38192868)
chr7 (205-250)||(38651786-38651831)
chr7 (199-243)||(3223038-3223082)
chr7 (205-249)||(4098099-4098143)
chr7 (198-250)||(7881411-7881463)
chr7 (277-325)||(7967775-7967823)
chr7 (277-313)||(15994546-15994582)
chr7 (198-250)||(16986711-16986763)
[»] scaffold0002 (1 HSPs)
scaffold0002 (195-327)||(332057-332187)
[»] scaffold0004 (1 HSPs)
scaffold0004 (205-327)||(212515-212636)
[»] scaffold0022 (1 HSPs)
scaffold0022 (205-327)||(63283-63404)
[»] scaffold0121 (2 HSPs)
scaffold0121 (276-327)||(12540-12591)
scaffold0121 (205-257)||(12470-12523)
[»] scaffold0580 (2 HSPs)
scaffold0580 (205-250)||(2185-2230)
scaffold0580 (205-250)||(9924-9969)
[»] scaffold0098 (1 HSPs)
scaffold0098 (205-250)||(4198-4243)
[»] scaffold0420 (1 HSPs)
scaffold0420 (195-243)||(4490-4538)
[»] scaffold0258 (1 HSPs)
scaffold0258 (279-327)||(18852-18900)


Alignment Details
Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 368 - 576
Target Start/End: Complemental strand, 53658838 - 53658629
Alignment:
Q  368 ttttggaccttcataaatttttgtttaagaaatctatcgtaagaannnnnnnnn-agaaattacaagtatgagtcctcaagatattttctaagtacattt 466  Q
    |||||||||||||||||||||||||||||||||||| |||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  53658838 ttttggaccttcataaatttttgtttaagaaatctaccgtaagatttttttttttagaaattacaagtatgagtcctcaagatattttctaagtacattt 53658739  T
Q  467 tatacaaaagttacaatttttacttgtttaaacaatatcttaacgatatttacttttcctaatttaaaagtattgtaaagaatgagaaagttattccaaa 566  Q
    |||||||||||||  ||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  53658738 tatacaaaagttatgatttttagttgtttaaacaatatcttgacgatatttacttttcctagtttaaaagtatcctaaagaatgagaaagttattccaaa 53658639  T
Q  567 atttcctatg 576  Q
    ||||||||||    
T  53658638 atttcctatg 53658629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 53659129 - 53659026
Alignment:
Q  16 actaacacactcaataacaaaatcattatttttattgacaactcaacttccttaacctaatcttagagtgaatagattaccagatatgacatttctactt 115  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53659129 actaacacacatgataacaaaatcattatttttattgacaactcaacttccttaacctaatcttagagtgaatagattaccagatatgacatttctactt 53659030  T
Q  116 tatt 119  Q
    ||||    
T  53659029 tatt 53659026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 168 - 318
Target Start/End: Complemental strand, 53658977 - 53658826
Alignment:
Q  168 aacacgattattgacatgctccttgtctaatttaagagttaatagtgttttacac-ccctgtaatataactcattttcagttttacctcctttgaaatan 266  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||||||| |   || |||||||||| |||||| |||||| ||| | |||||||     
T  53658977 aacacgatcatggacttgctccttgtctaatttaagagttaatagtgttttaccctttctataatataacttattttcggttttatctcatgtgaaatat 53658878  T
Q  267 nnnnnnnggatttcgtccttgtaatttaaagatttttagttttggactttca 318  Q
           ||||||||||||| |||||| ||||||||| ||||||||| ||||    
T  53658877 tttttttggatttcgtccttataatttgaagatttttggttttggaccttca 53658826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 30918919 - 30919041
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  ||||| |||||||| ||||||| ||||||||||||| | |||||        |||||||||||||||||||| |||||||||     
T  30918919 gttaatagtgttttatccccctataatataagtcatttttagttttacctcctgtaaaatattttttttggatttcgtccttgtaatttgaagatttttg 30919018  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  30919019 gttttggaccttcatgaattttg 30919041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 14946028 - 14946081
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  14946028 ggatttcgtccttctaatttaaagatttttggttttggactttcaagaattttg 14946081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 49166640 - 49166769
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaag 297  Q
    |||||| |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        | |||||||||||||||||| | |    
T  49166640 tttaagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttgaatttcgtccttgtaatttgatg 49166739  T
Q  298 atttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||| |||| ||||||||    
T  49166740 atttttggttttggaccttcatgaattttg 49166769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 205 - 328
Target Start/End: Complemental strand, 31226554 - 31226432
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        ||||||||||| |||||||| |||||||||     
T  31226554 gttaatagtgttttac-cccctgtaatataggtcatttccggttttaccccctgtaaaatattttttttggatttcgtccctgtaatttgaagatttttg 31226456  T
Q  305 gttttggactttcaagaattttgg 328  Q
    ||||||||| |||| |||||||||    
T  31226455 gttttggaccttcatgaattttgg 31226432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 18509985 - 18510106
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||| |||||||||| ||| | |||||        ||||||||||||||||| || |||||||||     
T  18509985 gttaatagtgttttat-cccctgtaatataggtcatttccagttttaccccctataaaatattctttttggatttcgtccttgtaacttgaagatttttt 18510083  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  18510084 gttttggaccttcatgaattttg 18510106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 41325587 - 41325466
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaata-nnnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||||||| | |||||         ||||||| |||||||||||| || ||||||    
T  41325587 gttaatagtgttttacccccctgtaatatagatcattttcggttttacctcctgtaaaatatttttttttggatttcctccttgtaatttgaatattttt 41325488  T
Q  304 agttttggactttcaagaattt 325  Q
     ||||||||| |||| ||||||    
T  41325487 ggttttggaccttcatgaattt 41325466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 22853964 - 22854087
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaat-annnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| ||| |||||||||  |||||||| |||||||| ||| | |||| |        |||||||||||||||||||| || ||||||    
T  22853964 gttaatagtgttttacccccttgtaatataggtcattttcggttttaccccctgtaaaattattttttttggatttcgtccttgtaatttgaatattttt 22854063  T
Q  304 agttttggactttcaagaattttg 327  Q
     ||||||||| |||| ||||||||    
T  22854064 ggttttggaccttcatgaattttg 22854087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 7913485 - 7913364
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||| ||| | || |         |||||||||||||||||||| || ||||||     
T  7913485 gttaatagtgttttac-cccctgtaatatatgtcattttcggttttaccccctgtaaatttttttttttggatttcgtccttgtaatttgaatatttttg 7913387  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  7913386 gttttggaccttcatgaattttg 7913364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 21507827 - 21507949
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| ||| |||||||||  ||||||||  |||| |||||| | |||||         ||||||||||||||||||| || ||||||     
T  21507827 gttaatagtgttttacccccatgtaatataggtcattttcgatttttcctcctgtaaaatatttttttttgatttcgtccttgtaatttgaatatttttg 21507926  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  21507927 gttttggaccttcatgaattttg 21507949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 3652341 - 3652394
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  3652341 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 3652394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 17696369 - 17696316
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  17696369 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 17696316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 50773291 - 50773412
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  ||||||||  |||||||  |||| |||||        ||||||| |||||||||||| |||||||||     
T  50773291 gttaatagtgttttaaccccctgtaatataggtcattttcgattttaccctctttaaaatattttttt-ggatttcttccttgtaatttgaagatttttg 50773389  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  50773390 gttttggaccttcatgaattttg 50773412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 12388156 - 12388208
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||    
T  12388156 gatttcgtccttgtaatgtaaagatttttggttttggaccttcatgaattttg 12388208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 14121551 - 14121498
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| |||||||||||||| ||||||||    
T  14121551 ggattccgtccttgtaatttgaagttttttggttttggactttcatgaattttg 14121498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 32682002 - 32681949
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||||||||||| |||||  || |||| ||||||||    
T  32682002 ggatttcgtccttgtaatttaaagatttttggttttaaaccttcatgaattttg 32681949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 55483840 - 55483795
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  55483840 gttaatagtgtttttcacccctgtaatataggtcattttcagtttt 55483795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 4102789 - 4102837
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacc 253  Q
    |||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  4102789 gttaatagtgttttatccccctgtaatatagctcatttccagttttacc 4102837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 39133156 - 39133208
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||| |||||| ||||||||| ||||||||| |||| ||||||||    
T  39133156 gatttcgtccttctaatttgaagatttttggttttggaccttcatgaattttg 39133208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 29104161 - 29104259
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaata-nnnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||||| |||||         |||||||||||||||||||| |||||||||    
T  29104161 gttaatagtgttttac-cccctgtaatataggtcatttccggttttaccccctttaaaatattattttttggatttcgtccttgtaatttgaagattttt 29104259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 49296304 - 49296253
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||| || ||||||||| ||||||||| |||| ||||||||    
T  49296304 atttcgtccttgtaacttgaagattttttgttttggaccttcatgaattttg 49296253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 16589054 - 16589104
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| || |||| ||||||||||| |||| ||||||||    
T  16589054 tttcgtccttgtaatttgaatatttatagttttggaccttcatgaattttg 16589104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 26040812 - 26040758
Alignment:
Q  274 ggatttcgtccttgtaatttaaaga-tttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| |||| ||||| ||||||||| |||| ||||||||    
T  26040812 ggatttcgtccttgtaatttgaagatttttttgttttggaccttcatgaattttg 26040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 39534056 - 39534094
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatata 234  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  39534056 aatttaagggttaatagtgtttttcacccctgtaatata 39534094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 32678 - 32633
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  32678 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 3849825 - 3849870
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  3849825 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 3849870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 17697156 - 17697201
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| ||||| |||||||||  ||||||||||||||    
T  17697156 gttaatagtgtttttcacccttgtaatatatgtcattttcagtttt 17697201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 19675892 - 19675847
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  19675892 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 19675847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 23184827 - 23184879
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||| ||||||||    
T  23184827 ggatttcgtccttgtaatttgaagattttt-ggtttggaccttcatgaattttg 23184879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 24675352 - 24675401
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattt 325  Q
    |||||||||||||||||| ||||| ||| ||||||||| |||| ||||||    
T  24675352 atttcgtccttgtaatttgaagatatttggttttggaccttcatgaattt 24675401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 234
Target Start/End: Complemental strand, 39702489 - 39702460
Alignment:
Q  205 gttaatagtgttttacacccctgtaatata 234  Q
    ||||||||||||||||||||||||||||||    
T  39702489 gttaatagtgttttacacccctgtaatata 39702460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 42056049 - 42056102
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  42056049 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 42056102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 49236582 - 49236537
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  49236582 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 49236537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 313
Target Start/End: Complemental strand, 50604174 - 50604137
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggac 313  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  50604174 atttcgtccttgtaatttgaagatttttggttttggac 50604137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 23943882 - 23943918
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatata 234  Q
    |||||| |||||||||||||| |||||||||||||||    
T  23943882 tttaagggttaatagtgtttttcacccctgtaatata 23943918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 30409410 - 30409358
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| |||||||    
T  30409410 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaatttt 30409358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 36395525 - 36395481
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttca 318  Q
    |||||| ||||||||||||| ||||||||| ||||||||| ||||    
T  36395525 ggattttgtccttgtaatttgaagatttttggttttggaccttca 36395481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 42802617 - 42802565
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcct 257  Q
    |||||| ||||||||| |||||||||||||| |||||||  ||||| ||||||    
T  42802617 gttaatggtgttttacccccctgtaatataagtcatttttggttttccctcct 42802565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 2270454 - 2270576
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| |||||||||| ||| | |||||        ||||||||||||||||||| ||||||||||     
T  2270454 gttaatagtgttttacccccctgtaatataggtcatttccagttttaccccctgtaaaatattttttttggatttcgtccttgtaattcaaagatttttg 2270553  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  2270554 gttttggaccttcatgaattttg 2270576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 17158487 - 17158365
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| |||||||        |||||||||||||||||||| |||||||||     
T  17158487 gttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtgaaatattttatttggatttcgtccttgtaatttgaagatttttg 17158388  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| | || ||||||||    
T  17158387 gttttggacctccatgaattttg 17158365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 197 - 327
Target Start/End: Original strand, 21544124 - 21544254
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaa 296  Q
    ||||||| |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |     
T  21544124 atttaagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatattttttttggatttcgtccttgtaatttgat 21544223  T
Q  297 gatttttagttttggactttcaagaattttg 327  Q
    ||||||| ||||||||| |||| ||||||||    
T  21544224 gatttttggttttggaccttcatgaattttg 21544254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 16659834 - 16659714
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    ||||||||||||||||  ||||||||||||| | |||| | |||||||||||| | |||||        |||| ||||||||||||||| |||||||||     
T  16659834 gttaatagtgttttac--ccctgtaatataagttatttccggttttacctcctgtaaaatattttctttggatctcgtccttgtaatttgaagatttttt 16659737  T
Q  305 gttttggactttcaagaattttg 327  Q
     |||||||| |||| ||||||||    
T  16659736 attttggaccttcatgaattttg 16659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 26475765 - 26475886
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| ||| |||||||||  |||||||  |||||||||||| | |||||        ||||||| |||||||||||| || ||||||     
T  26475765 gttaatagtgttttac-cccttgtaatataggtcatttttggttttacctcctgtaaaatattttttttggatttcctccttgtaatttgaatatttttg 26475863  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  26475864 gttttggaccttcatgaattttg 26475886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 326
Target Start/End: Complemental strand, 34414645 - 34414523
Alignment:
Q  205 gttaatagtgtttta-cacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    ||||||||||||||| | |||||||||||||  |||||| | |||||||| ||| | |||||        ||||||||||||||||| || |||||||||    
T  34414645 gttaatagtgttttatcccccctgtaatataggtcatttccggttttaccccctataaaatatttattttggatttcgtccttgtaacttgaagattttt 34414546  T
Q  304 agttttggactttcaagaatttt 326  Q
     ||||||||| |||| |||||||    
T  34414545 tgttttggaccttcatgaatttt 34414523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 9676525 - 9676472
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||||||||||| ||||||||  |||| ||||||||    
T  9676525 ggatttcgtccttgtaatttaaagatttttggttttggatcttcatgaattttg 9676472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 22496002 - 22495951
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  22496002 atttcttccttgtaatttgaagatttttggttttggaccttcaagaattttg 22495951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 686664 - 686543
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||| | |||||| | |||||||  ||| | |||||        |||||||||||||||||||| |||||||||     
T  686664 gttaatagtgttttac-cccctgtaatattagtcatttccggttttacaccctgtaaaatattttgtttggatttcgtccttgtaatttgaagatttttg 686566  T
Q  305 gttttggactttcaagaattttg 327  Q
     |||||||| ||||  |||||||    
T  686565 attttggaccttcataaattttg 686543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 1227678 - 1227800
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| | |||||||||||  | |||| | |||||||| ||| | ||| |        |||||||||||||||||||| | |||||||     
T  1227678 gttaatagtgttttaccctcctgtaatataggttatttccggttttaccccctgtaaaagattttttttggatttcgtccttgtaatttgatgatttttg 1227777  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  1227778 gttttggaccttcatgaattttg 1227800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 12292933 - 12292986
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  12292933 ggattttgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 12292986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 16119764 - 16119817
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||| ||||||||    
T  16119764 ggatttcgtccttgtaatttgaagatttttggatttggaccttcatgaattttg 16119817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 6176684 - 6176739
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||| ||| |||||||||||||| |||||||||||||||  |||||||| |||||    
T  6176684 taattaaagggttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 6176739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 9234917 - 9234968
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||  |||||||    
T  9234917 atttcgtccttgtaatttgaagatttttggttttggaccttcataaattttg 9234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 13729238 - 13729188
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| | ||||||    
T  13729238 tttcgtccttgtaatttgaagatttttggttttggaccttcatgtattttg 13729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 13788038 - 13788088
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||| |||||||||||||| |||||||||||||||  |||||||| |||||    
T  13788038 taagggttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 13788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 13796657 - 13796707
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||| |||||||||||||| |||||||||||||||  |||||||| |||||    
T  13796657 taagggttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 13796707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 26882150 - 26882200
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||| | ||||||||| |||| ||||||||    
T  26882150 tttcgtccttgtaatttgaagatttctggttttggaccttcatgaattttg 26882200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 2965855 - 2965810
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  2965855 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 2965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 4408151 - 4408106
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||| ||||||  ||||||||||||||    
T  4408151 gttaatagtgtttttcacccctgcaatatatgtcattttcagtttt 4408106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 6176975 - 6176930
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  6176975 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 6176930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 10629825 - 10629878
Alignment:
Q  202 agagttaatagtgttttacacccctgtaatataactcattttcagttttacctc 255  Q
    ||||||||||||||||| ||||||| |||||||  |||||||| ||||| ||||    
T  10629825 agagttaatagtgtttttcacccctataatataggtcattttcggttttccctc 10629878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 234
Target Start/End: Complemental strand, 15543131 - 15543102
Alignment:
Q  205 gttaatagtgttttacacccctgtaatata 234  Q
    ||||||||||||||||||||||||||||||    
T  15543131 gttaatagtgttttacacccctgtaatata 15543102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 18592081 - 18592134
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||| |||||| ||||||||| ||||||||| |||| | ||||||    
T  18592081 ggatttcgtccttctaatttgaagatttttggttttggaccttcatggattttg 18592134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 18699282 - 18699237
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  18699282 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 18699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 19591583 - 19591538
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  19591583 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 19591538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 26241270 - 26241307
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  26241270 atttaagggttaatagtgtttttcacccctgtaatata 26241307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 32217045 - 32216992
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||    
T  32217045 ggatttcatccttgtaatttgaagagttttggttttggaccttcatgaattttg 32216992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 22756438 - 22756316
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  22756438 gttaatagtgttttacccccctgtaatataggtcattttcggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagatttttg 22756339  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  22756338 gttttggaccttcatgaattttg 22756316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 11721262 - 11721389
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagat 299  Q
    |||| |||||||||||||||| || ||||||||||  |||||| |||||||||| ||| | |||||        |||||||||||||||||||| |||||    
T  11721262 taagggttaatagtgttttacccctctgtaatataggtcatttccagttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagat 11721361  T
Q  300 ttttagttttggactttcaagaattttg 327  Q
    |||| ||||||||| |||| ||||||||    
T  11721362 ttttggttttggaccttcatgaattttg 11721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 25962804 - 25962925
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  25962804 gttaatagtgttttac-cccctgtaatataggtcattttcggttttaccccctgtaaaatattttttttggatttcgtccttgtaatttgaagatttttg 25962902  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  25962903 gttttggaccttcatgaattttg 25962925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 327
Target Start/End: Complemental strand, 7578073 - 7577944
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaag 297  Q
    |||||| ||||||||| |||||| ||| |||||||||  ||||||||  ||||||| ||| | |||||        ||||||||||||||||||||||||    
T  7578073 tttaagggttaatagtattttacccccttgtaatatatgtcattttcgattttaccccctgtaaaatactttttttggatttcgtccttgtaatttaaag 7577974  T
Q  298 atttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||| |||| ||||||||    
T  7577973 atttttggttttggaccttcatgaattttg 7577944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 325
Target Start/End: Complemental strand, 41123518 - 41123398
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  41123518 gttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctataaaatatattttttggatttcgtccttgtaatttgaagatttttg 41123419  T
Q  305 gttttggactttcaagaattt 325  Q
    ||||||||| |||| ||||||    
T  41123418 gttttggaccttcatgaattt 41123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 4413929 - 4414050
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||||||| | |||||        | |||||||||||||||||| |||||||||     
T  4413929 gttaatagtgttttac-cccctgtaatataggtcatttccggttttacctcctgtaaaatattttttttgaatttcgtccttgtaatttgaagatttttg 4414027  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  4414028 gttttggaccttcatgaattttg 4414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 327
Target Start/End: Original strand, 23159459 - 23159590
Alignment:
Q  196 aatttaagagttaatagtgttttacaccc-ctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaattta 294  Q
    |||||||| |||||||||||||||| ||| ||||||||||  | |||||| |||||||| ||| | |||||        ||||||||||||| |||||||    
T  23159459 aatttaagcgttaatagtgttttaccccctctgtaatataggttattttcggttttacc-cctataaaatattttttttggatttcgtccttataattta 23159557  T
Q  295 aagatttttagttttggactttcaagaattttg 327  Q
    ||||||||| ||||||||| |||| ||||||||    
T  23159558 aagatttttggttttggaccttcatgaattttg 23159590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 21039867 - 21039988
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||| |  || | |||||        |||||||||||||||||||| || ||||||     
T  21039867 gttaatagtgttttac-cccctgtaatataggtcattttcagttttatcctctgtaaaatattttttttggatttcgtccttgtaatttgaatatttttt 21039965  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  21039966 gttttggaccttcatgaattttg 21039988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 31312826 - 31312705
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||||||| | ||| |        ||||||||| |||||||||| |||||||||     
T  31312826 gttaatagtgttttac-cccctgtaatataggtcattttcggttttacctcctgtaaaaaaaaaaatttggatttcgtacttgtaatttgaagatttttg 31312728  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||| ||| |||| ||||||||    
T  31312727 gttttagaccttcatgaattttg 31312705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 327
Target Start/End: Complemental strand, 12148290 - 12148160
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaa 295  Q
    |||| ||| |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | || |         |||||||||||||||||||| |    
T  12148290 aattaaagggttaatagtgttttac-cccctgtaatataggtcatttccggttttaccccctgtaaattttttttttgggatttcgtccttgtaatttga 12148192  T
Q  296 agatttttagttttggactttcaagaattttg 327  Q
    |||||||| ||||||||| |||| ||||||||    
T  12148191 agattttttgttttggaccttcatgaattttg 12148160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 6897158 - 6897036
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||| |||||||||||  ||||||||||||  |||||| |||||||| | ||| | |||||        |||||||||||||||||||| |||||||||     
T  6897158 gttagtagtgttttacctccctgtaatataggtcatttccagttttatcccctgtaaaatattttttttggatttcgtccttgtaatttgaagatttttt 6897059  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| ||||  |||||||    
T  6897058 gttttggaccttcataaattttg 6897036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 31567704 - 31567756
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||| |||||||||||| ||||||||| ||||||||| |||||||||||||    
T  31567704 gatttcatccttgtaatttgaagatttttggttttggaccttcaagaattttg 31567756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 17886005 - 17885955
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| |||| |||| |||||||||||||| ||||||||    
T  17886005 tttcgtccttgtaatttgaagaattttggttttggactttcatgaattttg 17885955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 25233928 - 25233878
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  25233928 tttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 25233878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 25298088 - 25298038
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  25298088 tttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 25298038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 28796417 - 28796470
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| |||||| || |||| ||||||||    
T  28796417 ggatttcgtccttgtaatttgaagatttttggttttgaaccttcatgaattttg 28796470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 31920130 - 31920183
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  31920130 ggatttcgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 31920183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 34309615 - 34309562
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||||||||||||| |||| ||||||||    
T  34309615 ggattccgtccttgtaatttgaagttttttagttttggaccttcatgaattttg 34309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 37217508 - 37217455
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||  |||||||    
T  37217508 ggatttcgtccttgtaatttgaagatttttggttttggaccttcataaattttg 37217455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 38874642 - 38874593
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaat 323  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  38874642 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaat 38874593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 4561908 - 4561853
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttggc 329  Q
    ||||||||||| |||||||| ||||||||| ||||||||  |||| ||||||||||    
T  4561908 ggatttcgtccctgtaatttgaagatttttggttttggatcttcatgaattttggc 4561853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 6117658 - 6117709
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||| |||||| || |||||| ||||||||| |||||||||||||    
T  6117658 atttcgtccttataatttgaatatttttggttttggaccttcaagaattttg 6117709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 7709714 - 7709757
Alignment:
Q  201 aagagttaatagtgttttacacccctgtaatataactcattttc 244  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||    
T  7709714 aagagttaatagtgctttacacccttgtaatataagtcattttc 7709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 10542342 - 10542303
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  10542342 taatttaagggttaatagtgtttttcacccctgtaatata 10542303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 30916485 - 30916606
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    ||||||||| |||||| ||||| |||||||  |||||||| |||||||| | | | |||||        |||||||||||||||||||| |||||||||     
T  30916485 gttaatagttttttac-cccctataatatatgtcattttcggttttaccccatgtaaaatattttttttggatttcgtccttgtaatttgaagatttttg 30916583  T
Q  305 gttttggactttcaagaattttg 327  Q
    |||||  || |||| ||||||||    
T  30916584 gttttataccttcatgaattttg 30916606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 1950087 - 1950042
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  1950087 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 1950042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 13006703 - 13006658
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  13006703 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 13006658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 16867762 - 16867807
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  16867762 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 16867807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 22833684 - 22833639
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  22833684 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 22833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 25233701 - 25233742
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttca 318  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||    
T  25233701 tttcgtccttgtaatttgaagatttttggttttggaccttca 25233742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 25297861 - 25297902
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttca 318  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||    
T  25297861 tttcgtccttgtaatttgaagatttttggttttggaccttca 25297902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 26524676 - 26524631
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  26524676 gttaatagtgtttttcacccctgtaatatatgtcatttccagtttt 26524631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 29989748 - 29989703
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||    
T  29989748 gttaatagtgtttttcacccctgtaatatatgtcattttcattttt 29989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 32637466 - 32637511
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  32637466 gttaatagtgtttttcacccctgtaatataggtcatttccagtttt 32637511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 38031958 - 38032003
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  38031958 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 38032003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 42097961 - 42097908
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||||||| ||||||||| |||||||||| ||  ||||||||    
T  42097961 ggatttagtccttgtaatttgaagatttttggttttggactgtcgtgaattttg 42097908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 5105105 - 5105149
Alignment:
Q  206 ttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||    
T  5105105 ttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 5105149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 40765455 - 40765507
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  40765455 gattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 40765507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 33218699 - 33218577
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  33218699 gttaatagtgttttacccccctgtaatataggtcattttcggttttaccccctgtaaaatattttttttggatttcgtccttgtaatttgaagatttttg 33218600  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  33218599 gttttggaccttcatgaattttg 33218577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 9419873 - 9419751
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||  || | |||||        ||||||||||||||||| || |||||||||     
T  9419873 gttaatagtgttttagtcccctgtaatataggtcattttcagttttaccctctataaaatattttttttggatttcgtccttgtaacttgaagatttttt 9419774  T
Q  305 gttttggactttcaagaattttg 327  Q
    |||||||||||||| ||||||||    
T  9419773 gttttggactttcatgaattttg 9419751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 38127765 - 38127886
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  38127765 gttaatagtgttttac-cccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagatttttg 38127863  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  38127864 gttttggaccttcatgaattttg 38127886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 38949858 - 38949980
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| | |||||||     
T  38949858 gttaatagtgttttaaccccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgatgatttttg 38949957  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  38949958 gttttggaccttcatgaattttg 38949980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 327
Target Start/End: Complemental strand, 1975862 - 1975734
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaag 297  Q
    |||||| |||||||||||||||| |  ||||||||||  | |||||| |||||||||||| | |||||        |||||||||||||||||||| ||     
T  1975862 tttaagggttaatagtgttttac-cttctgtaatataggttattttcggttttacctcctgtaaaatattttttttggatttcgtccttgtaatttgaat 1975764  T
Q  298 atttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||| |||| ||||||||    
T  1975763 atttttggttttggaccttcatgaattttg 1975734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 207 - 327
Target Start/End: Complemental strand, 43830874 - 43830754
Alignment:
Q  207 taatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagatttttagt 306  Q
    |||||||||||||| ||| |||||||||  |||||||| |||||| | ||| | |||||        |||||||||||||||||||| || |||||| ||    
T  43830874 taatagtgttttacccccttgtaatataggtcattttcggttttatcccctgtaaaatattttttttggatttcgtccttgtaatttgaatatttttggt 43830775  T
Q  307 tttggactttcaagaattttg 327  Q
    ||||||| |||| ||||||||    
T  43830774 tttggaccttcatgaattttg 43830754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 206 - 327
Target Start/End: Original strand, 42794013 - 42794135
Alignment:
Q  206 ttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnn-ggatttcgtccttgtaatttaaagattttta 304  Q
    ||||||||||||||| ||| |||||||||| ||||||||  ||||||| ||| | |||||         |||||||||||||||||||| || ||||||     
T  42794013 ttaatagtgttttacccccttgtaatataagtcattttcgattttaccccctgtaaaatatttttttttggatttcgtccttgtaatttgaatatttttg 42794112  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  42794113 gttttggaccttcatgaattttg 42794135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 39373064 - 39373117
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  39373064 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 39373117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 15544088 - 15543965
Alignment:
Q  205 gttaatagtgttttacacc-cctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| || |||||||||||  |||||| | |||||||| ||| | |||||        | |||||||||||||||||| | |||||||    
T  15544088 gttaatagtgttttaccccgcctgtaatataggtcatttccggttttaccccctgtaaaatatattttttgaatttcgtccttgtaatttgatgattttt 15543989  T
Q  304 agttttggactttcaagaattttg 327  Q
     ||||||||| |||| ||||||||    
T  15543988 ggttttggaccttcatgaattttg 15543965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 7318165 - 7318215
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  7318165 tttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 7318215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 19272664 - 19272785
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||| | |||||||| ||| | |||||        ||||||||||||| |||||| |||||||||     
T  19272664 gttaatagtgttttat-cccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttataatttgaagatttttg 19272762  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||| ||| |||| ||||||||    
T  19272763 gttttagaccttcatgaattttg 19272785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 25104109 - 25103987
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  ||||||||||| |  | |||||| |||||| | ||| | |||||        ||||||| |||||||||||| |||||||||     
T  25104109 gttaatagtgttttatccccctgtaatacagattattttcggttttatcccctgtaaaatattttttttggatttcatccttgtaatttgaagatttttg 25104010  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  25104009 gttttggaccttcatgaattttg 25103987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 34831493 - 34831615
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||||  ||||| || ||| | |||||        |||||| ||||||||||||| |||||||||     
T  34831493 gttaatagtgttttatccccctgtaatatatgtcatttttggttttgccccctgtaaaatatattttttggattttgtccttgtaatttgaagatttttg 34831592  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||| | |||| ||||||||    
T  34831593 gttttggcccttcatgaattttg 34831615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 16303926 - 16303873
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||    
T  16303926 ggatttcttccttgtaatttgaagaattttggttttggactttcatgaattttg 16303873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 18048887 - 18048940
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| || |||||| ||||||||| |||| ||||||||    
T  18048887 ggatttcgtccttgtaatttgaatatttttggttttggaccttcatgaattttg 18048940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 18756646 - 18756601
Alignment:
Q  282 tccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||    
T  18756646 tccttgtaatttaaagatttttggttttggaccttcatgaattttg 18756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 19253470 - 19253523
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| || ||||||||| ||||||||| |||| ||||||||    
T  19253470 ggatttcgtccttgtaagttgaagatttttggttttggaccttcatgaattttg 19253523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 22846284 - 22846231
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||  ||||||||    
T  22846284 ggatttcgtccttgtaatttaaagatctttggttttggaccttcttgaattttg 22846231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 27926935 - 27926980
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  27926935 gttaatagtgtttttcacccctgtaatatatgtcattttcagtttt 27926980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 5513476 - 5513530
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| | |||||||||||||| |||||||||||||||  |||||| |||||||    
T  5513476 aatttatgggttaatagtgtttttcacccctgtaatatatgtcatttccagtttt 5513530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 17188922 - 17188872
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||| ||||||||    
T  17188922 tttcgtccttgtagtttgaagatttttggttttggaccttcatgaattttg 17188872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 874424 - 874477
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| || |||||| ||||| ||| |||| ||||||||    
T  874424 ggatttcgtccttgtaatttgaatatttttggttttagaccttcatgaattttg 874477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 7008078 - 7008025
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  7008078 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 7008025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 8224391 - 8224436
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  8224391 gttaatagtgtttttcacccctgtaatatatgtcatttccagtttt 8224436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 20962327 - 20962282
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  20962327 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 20962282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 27197738 - 27197775
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  27197738 atttaagggttaatagtgtttttcacccctgtaatata 27197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Original strand, 27853165 - 27853202
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  27853165 atttaagggttaatagtgtttttcacccctgtaatata 27853202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 34963636 - 34963591
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  34963636 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 34963591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 36202122 - 36202167
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  36202122 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 36202167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 36525346 - 36525399
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  36525346 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 36525399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 3596652 - 3596696
Alignment:
Q  206 ttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||||| ||||||| |||||||  ||||||||||||||    
T  3596652 ttaatagtgtttttcacccctataatatatttcattttcagtttt 3596696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 16204612 - 16204560
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    ||||||||||||| |||||| |||| |||| ||||||||| |||| |||||||    
T  16204612 ggatttcgtccttctaatttgaagaattttggttttggacattcatgaatttt 16204560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 16303624 - 16303668
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttt 249  Q
    |||||||||||||||| ||||| |||||||  |||||||||||||    
T  16303624 gttaatagtgttttactcccctataatatatgtcattttcagttt 16303668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 5457078 - 5457204
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagat 299  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||  || | |||||        |||||||||||||||||||| || ||    
T  5457078 taagagttaatagtgttttac-cccctgtaatataggtcattttcagttttaccctctataaaatattttttttggatttcgtccttgtaatttgaatat 5457176  T
Q  300 ttttagttttggactttcaagaattttg 327  Q
    |||| ||||||||| |||| ||||||||    
T  5457177 ttttggttttggaccttcatgaattttg 5457204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 26190732 - 26190854
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| ||| |||||||||  |||||||| |||||||| ||| | |||||        |||||| ||||||||||||| |||||||||     
T  26190732 gttaatagtgttttacccccttgtaatataggtcattttcggttttaccccctgtaaaataaattttttggattttgtccttgtaatttgaagatttttg 26190831  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  26190832 gttttggaccttcatgaattttg 26190854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 325
Target Start/End: Original strand, 5931962 - 5932083
Alignment:
Q  205 gttaatagtgttttacacccc-tgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| |||| |||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| |||||||||    
T  5931962 gttaatagtgttttaccccccctgtaatataggtcattttcggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagattttt 5932061  T
Q  304 agttttggactttcaagaattt 325  Q
     ||||||||| |||| ||||||    
T  5932062 ggttttggaccttcatgaattt 5932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 22387480 - 22387427
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  22387480 ggatttcgtccttgtaatttaaagatttttggttttggaccttcaagaattttg 22387427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 9209575 - 9209698
Alignment:
Q  205 gttaatagtgttttacacccc-tgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    |||||||||||||||| |||| |||||||||  |||||||| |||||||| ||| | |||||        ||||||| |||||||||||| || ||||||    
T  9209575 gttaatagtgttttaccccccctgtaatataggtcattttcggttttaccccctgtaaaatattttttttggatttcctccttgtaatttgaatattttt 9209674  T
Q  304 agttttggactttcaagaattttg 327  Q
     ||||||||| |||| ||||||||    
T  9209675 ggttttggaccttcatgaattttg 9209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 327
Target Start/End: Complemental strand, 26399234 - 26399108
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagat 299  Q
    |||| |||||||||||||||| |||||||||||||  ||||||||  ||||||| | | | |||||        |||||||||||||||||||| || ||    
T  26399234 taagggttaatagtgttttac-cccctgtaatataggtcattttcgattttaccccttgtaaaatatattttttggatttcgtccttgtaatttgaatat 26399136  T
Q  300 ttttagttttggactttcaagaattttg 327  Q
    |||| ||||||||| |||| ||||||||    
T  26399135 ttttggttttggaccttcatgaattttg 26399108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 21770756 - 21770878
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  ||  || | |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  21770756 gttaatagtgttttacccccctgtaatataggtcgattccggttttaccccctgtaaaataatttttttggatttcgtccttgtaatttgaagatttttg 21770855  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||  | |||| ||||||||    
T  21770856 gttttgtgccttcatgaattttg 21770878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 23161896 - 23161949
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| |||||||||  |||||||| |||| ||||||||    
T  23161896 ggatttcgtccttgtaatttgaagatttttgattttggaccttcatgaattttg 23161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 47231187 - 47231240
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  47231187 ggatttcgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 47231240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 17213307 - 17213359
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcct 257  Q
    |||||||||||||||  |||||||||||||  |||||||||| ||||||||||    
T  17213307 gttaatagtgttttatccccctgtaatataggtcattttcaggtttacctcct 17213359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 27665987 - 27666039
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    |||||||||||||||||||| ||||||||| ||||| ||| |||| |||||||    
T  27665987 ggatttcgtccttgtaatttgaagatttttggttttcgaccttcatgaatttt 27666039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 14910136 - 14910085
Alignment:
Q  199 ttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||| |||||||||||||||| |||||||||||||  |||||||| |||||    
T  14910136 ttaagggttaatagtgttttactcccctgtaatataggtcattttcggtttt 14910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 8262741 - 8262791
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||| |||||||| ||||| |||||||||||||||  ||||||||||||||    
T  8262741 taagggttaatagagtttttcacccctgtaatataggtcattttcagtttt 8262791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 16420914 - 16421036
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||||||| |||||||||  |||||||| ||||| |  ||| | ||||         || |||| |||||||||||| ||||||| ||    
T  16420914 gttaatagtgttttacacccttgtaatataggtcattttcggttttccaccctgtaaaattttttgtttggttttcatccttgtaatttgaagatttcta 16421013  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| || | ||||||||    
T  16421014 gttttggacctttatgaattttg 16421036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 3787241 - 3787286
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  3787241 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 3787286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 8264114 - 8264069
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  8264114 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 8264069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 15734476 - 15734521
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  15734476 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 15734521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 17889517 - 17889570
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||| |||||||||||||| ||||| |||||||||  ||||||| ||||||    
T  17889517 atttaagggttaatagtgtttttcacccatgtaatatatgtcatttttagtttt 17889570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 29525905 - 29525860
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  29525905 gttaatagtgtttttcacccctgtaatatatatcattttcggtttt 29525860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 44914416 - 44914375
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcag 246  Q
    |||||||||| ||| |||||||||||||||| ||||||||||    
T  44914416 gttaatagtgcttttcacccctgtaatataagtcattttcag 44914375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 46529063 - 46529010
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttggc 329  Q
    |||||||||||||||| | |||| |||| ||||||||| |||| ||||||||||    
T  46529063 atttcgtccttgtaatgtgaagaattttggttttggaccttcatgaattttggc 46529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 51237964 - 51238009
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||    
T  51237964 gttaatagtgtttttcacccctgtaatatatgtcattttcaatttt 51238009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 6284482 - 6284430
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||||| || ||||||  |||||||| |||| ||||||||    
T  6284482 gatttcgtccttgtaatttgaatatttttgattttggaccttcatgaattttg 6284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 16985189 - 16985237
Alignment:
Q  202 agagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||||||  ||||||||||||||  |||||||| |||||    
T  16985189 agagttaatagtgttttttacccctgtaatatatgtcattttcggtttt 16985237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 32116456 - 32116408
Alignment:
Q  202 agagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||||||||| || ||||||||||||  | ||||||||||||    
T  32116456 agagttaatagtgtttttcatccctgtaatatatgttattttcagtttt 32116408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 52839673 - 52839551
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  52839673 gttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagatttttg 52839574  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  52839573 gttttggaccttcatgaattttg 52839551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 5572327 - 5572205
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  5572327 gttaatagtgttttactcccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagatttttg 5572228  T
Q  305 gttttggactttcaagaattttg 327  Q
     |||||||| |||| ||||||||    
T  5572227 attttggaccttcatgaattttg 5572205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 13041737 - 13041615
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||  |||||||  |||   |||||        |||||||||||||||||||| |||||||||     
T  13041737 gttaatagtgttttacccccctgtaatataggtcatttttggttttactccctggaaaatatattttttggatttcgtccttgtaatttgaagatttttg 13041638  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  13041637 gttttggaccttcatgaattttg 13041615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 13049814 - 13049692
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||  |||||||  |||   |||||        |||||||||||||||||||| |||||||||     
T  13049814 gttaatagtgttttacccccctgtaatataggtcatttttggttttactccctggaaaatatattttttggatttcgtccttgtaatttgaagatttttg 13049715  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  13049714 gttttggaccttcatgaattttg 13049692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 22817883 - 22818005
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| |  ||||||| ||  | |||||        |||||||||||||||||||| |||||||||     
T  22817883 gttaatagtgttttacccccctgtaatataggtcatttccgattttacccccgataaaatatattttttggatttcgtccttgtaatttgaagatttttg 22817982  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  22817983 gttttggaccttcatgaattttg 22818005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 327
Target Start/End: Complemental strand, 14004638 - 14004516
Alignment:
Q  204 agttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    ||||||||||||||||| |||||||||||||  |||||| |  ||||||||||| | |||||        ||||||| |||||||||||| || ||||||    
T  14004638 agttaatagtgttttac-cccctgtaatataggtcatttccgattttacctcctctaaaatattttttttggatttcatccttgtaatttgaaaattttt 14004540  T
Q  304 agttttggactttcaagaattttg 327  Q
     |||||| ||||||| ||||||||    
T  14004539 ggttttgaactttcatgaattttg 14004516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 300169 - 300291
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| |  ||||||| ||| | |||||        | |||||||||||||||||| | |||||||     
T  300169 gttaatagtgttttacccccctgtaatataggtcatttccgattttaccccctgtaaaatatattttttgaatttcgtccttgtaatttgatgatttttg 300268  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  300269 gttttggaccttcatgaattttg 300291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 19111313 - 19111192
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  ||| |||  |||||||| ||| | |||||        |||||| ||||||||||||| |||||||||     
T  19111313 gttaatagtgttttacccccctgtaatataggtcacttttggttttacc-cctgtaaaatattttttttggattttgtccttgtaatttgaagatttttg 19111215  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  19111214 gttttggaccttcatgaattttg 19111192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 3505305 - 3505252
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||||||||||||| ||||||||| || | ||||||||    
T  3505305 ggatttcgtccttgtaatttaaagatttttggttttggacctttatgaattttg 3505252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 28735513 - 28735568
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttggc 329  Q
    ||||||||||| |||||||| ||||||||| ||||||||| |||| ||||||||||    
T  28735513 ggatttcgtccatgtaatttgaagatttttggttttggaccttcatgaattttggc 28735568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 48689175 - 48689214
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggac 313  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  48689175 ggatttcgtccttgtaatttaaagatttttggttttggac 48689214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 31293453 - 31293515
Alignment:
Q  203 gagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaata 265  Q
    |||||||||||||||||| |||||||||||||| |||||| | ||||| || ||||| |||||    
T  31293453 gagttaatagtgttttacccccctgtaatataagtcatttccggtttttccccctttaaaata 31293515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 32721881 - 32721759
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  ||||||||||||   |||||| | |||||||| ||  | |||||        ||||||||||||||||| || |||||||||     
T  32721881 gttaatagtgttttagccccctgtaatattggtcatttccggttttaccccccataaaatattttttttggatttcgtccttgtaacttgaagatttttt 32721782  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  32721781 gttttggaccttcatgaattttg 32721759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 7015011 - 7014966
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  7015011 gttaatagtgtttttcacccctgtaatatatgtcattttcagtttt 7014966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 13439869 - 13439816
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  13439869 ggatttcctccttgtaatttgaagatttttggttttggaccttcatgaattttg 13439816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 14870235 - 14870182
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| || | ||||||||    
T  14870235 ggatttcgtccttgtaatttgaagatttttcgttttggacctttatgaattttg 14870182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 7670491 - 7670611
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| ||  | |||||||  | |||||| |||||||||||| | |||||        |||||||||||||||||||| ||||| |||     
T  7670491 gttaatagtgttttactcc--tataatatatgttattttcggttttacctcctgtaaaatatttttttgggatttcgtccttgtaatttgaagatatttg 7670588  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| || | ||||||||    
T  7670589 gttttggaccttaatgaattttg 7670611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 10265491 - 10265537
Alignment:
Q  204 agttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||||||| |||||||||||||||  ||||||||| ||||    
T  10265491 agttaatagtgtttttcacccctgtaatatatgtcattttcaatttt 10265537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 52866252 - 52866214
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatata 234  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  52866252 aatttaagggttaatagtgtttttcacccctgtaatata 52866214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 5047450 - 5047405
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  5047450 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 5047405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 7731272 - 7731317
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  7731272 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 7731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 9268575 - 9268620
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  9268575 gttaatagtgtttttcacccctgtaatatatgtcatttccagtttt 9268620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 13207492 - 13207537
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||| ||||||||||  ||||||||||||||    
T  13207492 gttaatagtgtttttcacctctgtaatatatgtcattttcagtttt 13207537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 16897393 - 16897340
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||| ||| || | ||||||||    
T  16897393 ggatttcgtccttgtaatttgaagatttttggtttttgacctttatgaattttg 16897340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 21015242 - 21015287
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||    
T  21015242 gttaatagtgcttttcacccctgtaatatatgtcattttcagtttt 21015287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 25484118 - 25484163
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  25484118 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 25484163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 34519879 - 34519924
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  34519879 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 34519924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 37585638 - 37585683
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  37585638 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 37585683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 38703289 - 38703236
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||| | ||||||||| ||||||||| |||  ||||||||    
T  38703289 ggatttcgtccttgtaatctgaagatttttggttttggaccttcgtgaattttg 38703236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 40004158 - 40004113
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  40004158 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 40004113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 48629577 - 48629532
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  48629577 gttaatagtgtttttcacccctgtaatataggtcatttccagtttt 48629532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 54014559 - 54014604
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  54014559 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 54014604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 5154723 - 5154767
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttt 249  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||    
T  5154723 gttaatagtgtttttcacccctgtaatatatgtcattttcggttt 5154767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 14154779 - 14154818
Alignment:
Q  202 agagttaatagtgttttacacccctgtaatataactcattt 242  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  14154779 agagttaatagtgttttac-cccctgtaatataagtcattt 14154818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 14155081 - 14155029
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    |||||||||||||||||||| |||||||||   ||||||| |||| |||||||    
T  14155081 ggatttcgtccttgtaatttgaagatttttgcctttggaccttcatgaatttt 14155029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 17030608 - 17030652
Alignment:
Q  283 ccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  17030608 ccttgtaatttgaagatttttggttttggaccttcatgaattttg 17030652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 31293756 - 31293704
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  31293756 gattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 31293704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 327
Target Start/End: Complemental strand, 41509754 - 41509633
Alignment:
Q  206 ttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagatttttag 305  Q
    ||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| ||||||||| |    
T  41509754 ttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaagatttttgg 41509655  T
Q  306 ttttggactttcaagaattttg 327  Q
    |||||||| |||| ||||||||    
T  41509654 ttttggaccttcatgaattttg 41509633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 199 - 327
Target Start/End: Complemental strand, 32684942 - 32684814
Alignment:
Q  199 ttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaaga 298  Q
    ||||| |||||||||||||||| |||||||||| ||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| ||||    
T  32684942 ttaagggttaatagtgttttacccccctgtaatttaggtcatttccggttttaccccctgtaaaatatattttttggatttcgtccttgtaatttgaaga 32684843  T
Q  299 tttttagttttggactttcaagaattttg 327  Q
    ||||| ||||||||| |||| ||||||||    
T  32684842 tttttggttttggaccttcatgaattttg 32684814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 12478570 - 12478697
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagat 299  Q
    |||| |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| | |||    
T  12478570 taagggttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatattttttttggatttcgtccttgtaatttgatgat 12478669  T
Q  300 ttttagttttggactttcaagaattttg 327  Q
    |||| ||||||||| |||| ||||||||    
T  12478670 ttttggttttggaccttcatgaattttg 12478697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 24768533 - 24768662
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaag 297  Q
    |||||| |||||||||||||||| | |||||||||||  |||||||| |||||| | ||| |||||||        |||||||||||||||||||| |||    
T  24768533 tttaagggttaatagtgttttaccctcctgtaatataggtcattttcggttttaacccctgtgaaatattttatttggatttcgtccttgtaatttgaag 24768632  T
Q  298 atttttagttttggactttcaagaattttg 327  Q
    |||||| |||||| || || | ||||||||    
T  24768633 atttttggttttgaaccttaatgaattttg 24768662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 38711995 - 38711874
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||| ||| | || ||         ||||||||||||||||||| || ||||||     
T  38711995 gttaatagtgttttac-cccctgtaatataggtcattttcagttttaccccctgtaaagtattttttttcgatttcgtccttgtaatttgaatatttttg 38711897  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  38711896 gttttggaccttcatgaattttg 38711874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 23389022 - 23389142
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||| |||||||||  ||||||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| |||||||||     
T  23389022 gttaattgtgttttac--ccctgtaatatagatcattttcggttttaccccctgtaaaataatttttttggatttcgtccttgtaatttgaagatttttg 23389119  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| ||||  |||||||    
T  23389120 gttttggaccttcataaattttg 23389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 11830177 - 11830299
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| |  ||||||| ||| | |||||        | |||||||||||||||||| | |||||||     
T  11830177 gttaatagtgttttacccccctgtaatataggtcatttccgattttaccccctgtaaaatatattttttgaatttcgtccttgtaatttgatgatttttg 11830276  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  11830277 gttttggaccttcatgaattttg 11830299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 13572613 - 13572663
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  13572613 tttcgtccttgtaatttaaagatttttggttttggaccttcatgaattttg 13572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 34227329 - 34227450
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||| ||||| | |||||         ||||||||||||||||||| |||||||||     
T  34227329 gttaatagtgttttac-cccctgtaatataggtcatttccggttttatctcctgtaaaatattttttttagatttcgtccttgtaatttgaagatttttg 34227427  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||| ||| |||| ||||||||    
T  34227428 gttttagaccttcatgaattttg 34227450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 24331633 - 24331580
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  24331633 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 24331580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 28004635 - 28004687
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||||||||    
T  28004635 tttaagggttaatagtgtttttcacccctgtaatatatgtcattttcagtttt 28004687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 28061937 - 28061989
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||||||||    
T  28061937 tttaagggttaatagtgtttttcacccctgtaatatatgtcattttcagtttt 28061989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 38703902 - 38703850
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| |||||||    
T  38703902 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaatttt 38703850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 322
Target Start/End: Complemental strand, 2873820 - 2873704
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaaga-ttttt 303  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||| |||||| | |||||        | ||||| |||||||||||| |||| |||||    
T  2873820 gttaatagtgttttac-cccctgtaatataagtcattttcggtttt-cctcctgtaaaatatattttttgaatttcatccttgtaatttgaagatttttt 2873723  T
Q  304 agttttggactttcaagaa 322  Q
     ||||||||| ||||||||    
T  2873722 ggttttggaccttcaagaa 2873704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 13558570 - 13558649
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattt----tggcagggggcaaaccgtaatttg 349  Q
    |||||||||||||||||||| ||||||||| |||||| || |||| ||||||    |||||||||| |||||| ||||||    
T  13558570 ggatttcgtccttgtaatttgaagatttttggttttgtaccttcatgaattttgactggcagggggtaaaccgaaatttg 13558649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 23245573 - 23245614
Alignment:
Q  286 tgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  23245573 tgtaatttgaagatttttagttttggactttcatgaattttg 23245614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 26253006 - 26253051
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  26253006 gttaatagtgtttttcacccctgtaatataggtcattttcagtttt 26253051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 31974995 - 31974942
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||||| |||||||||| |||||| || |||| ||||||||    
T  31974995 ggatttcgtccttgtaattcaaagatttttggttttgaaccttcatgaattttg 31974942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 36637063 - 36637116
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||| ||||| || |||||||||||||||| |||| ||||||||    
T  36637063 ggatttcgtccttggaatttgaatatttttagttttggacattcatgaattttg 36637116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 40628457 - 40628412
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  40628457 gttaatagtgtttttcacccctgtaatatatgtcattttcagtttt 40628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 32393381 - 32393433
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaatttt 326  Q
    |||||||||||||||||||| ||||||||| ||||||||| || | |||||||    
T  32393381 ggatttcgtccttgtaatttgaagattttttgttttggacctttatgaatttt 32393433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 34821700 - 34821648
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| |||||||||||||||   |||||||||||||    
T  34821700 tttaagggttaatagtgtttttcacccctgtaatataggccattttcagtttt 34821648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 3156133 - 3156172
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggac 313  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  3156133 ggatttcgaccttgtaatttaaagatttttggttttggac 3156172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 5642781 - 5642832
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||| || |||||| ||||||||| |||| ||||||||    
T  5642781 atttcgtccttgtaatttgaatatttttggttttggaccttcatgaattttg 5642832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 5644722 - 5644773
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||| || |||||| ||||||||| |||| ||||||||    
T  5644722 atttcgtccttgtaatttgaatatttttggttttggaccttcatgaattttg 5644773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 28889019 - 28889058
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  28889019 taatttaagggttaatagtgtttttcacccctgtaatata 28889058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 5566785 - 5566735
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||| | ||||||||| |||| ||||||||    
T  5566785 tttcgtccttgtaatttgaagatttctggttttggaccttcatgaattttg 5566735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 17750135 - 17750093
Alignment:
Q  208 aatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||| |||||||||||||||  ||||||||||||||    
T  17750135 aatagtgtttttcacccctgtaatatatgtcattttcagtttt 17750093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 17759122 - 17759080
Alignment:
Q  208 aatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||||||| |||||||||||||||  ||||||||||||||    
T  17759122 aatagtgtttttcacccctgtaatatatgtcattttcagtttt 17759080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 27637370 - 27637320
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||| | ||||||||| |||| ||||||||    
T  27637370 tttcgtccttgtaatttgaagatttctggttttggaccttcatgaattttg 27637320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 116619 - 116664
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||    
T  116619 gttaatagtgtttttcacccctgtaatatatgtcattttcaatttt 116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 5566484 - 5566529
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||| ||||| |||||||||||||  ||||||||||||||    
T  5566484 gttaatagtgctttacccccctgtaatataggtcattttcagtttt 5566529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 9305789 - 9305733
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacc 253  Q
    ||||| || ||||||| |||||||| |||||||||||||  |||||||||||||||||    
T  9305789 aattttagggttaatattgttttac-cccctgtaatatagttcattttcagttttacc 9305733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 13200486 - 13200531
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||    
T  13200486 gttaatagtgtttttcacccctgtaatataggtcattttcaatttt 13200531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 15935767 - 15935715
Alignment:
Q  199 ttaagagttaatagtgttttacacccctgtaatataactcattttcagttttac 252  Q
    |||||||||||||||||||||| |||||||||| ||  |||||||| |||||||    
T  15935767 ttaagagttaatagtgttttac-cccctgtaatgtatgtcattttcggttttac 15935715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 17749863 - 17749908
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| || ||||||||||||  ||||||||||||||    
T  17749863 gttaatagtgtttttcatccctgtaatatatgtcattttcagtttt 17749908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 18029682 - 18029735
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||| ||||||| ||| ||||| ||||||||| |||| ||||||||    
T  18029682 ggatttcgtcctagtaattttaagtttttttgttttggaccttcatgaattttg 18029735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 22981092 - 22981047
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  22981092 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 22981047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 27418195 - 27418150
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  27418195 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 27418150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 30872700 - 30872647
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  30872700 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 30872647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 34663597 - 34663552
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||   |||||||||||||    
T  34663597 gttaatagtgtttttcacccctgtaatataggccattttcagtttt 34663552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 35990851 - 35990798
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| | | ||||||||||||||  |||| ||||||||    
T  35990851 ggatttcgtccttgtaatttgatgctttttagttttggatcttcatgaattttg 35990798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 40785243 - 40785288
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||    
T  40785243 gttaatagtgcttttcacccctgtaatataggtcattttcagtttt 40785288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 4335044 - 4334997
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcag 246  Q
    |||||| |||||||||||||||| |||||||||||||  ||||||||||    
T  4335044 tttaagggttaatagtgttttac-cccctgtaatataggtcattttcag 4334997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 29579104 - 29579148
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttt 249  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||    
T  29579104 gttaatagtgtttttcacccctgtaatataggtcattttcggttt 29579148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 327
Target Start/End: Complemental strand, 5864826 - 5864697
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaag 297  Q
    |||||| |||||||||||||||| ||||| |||||||  |||||| | |||||||| ||| | |||||        |||||||||||||||||||| |||    
T  5864826 tttaagggttaatagtgttttactcccctataatataggtcatttccggttttaccccctctaaaatatattttttggatttcgtccttgtaatttgaag 5864727  T
Q  298 atttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||| |||| ||||||||    
T  5864726 atttttggttttggaccttcatgaattttg 5864697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 21444238 - 21444117
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||||||| ||| | |||||        |||||||||||||||||||| ||| |||||     
T  21444238 gttaatagtgttttac-cccctgtaatataggtcattttcggttttaccccctgtaaaatattatttttggatttcgtccttgtaatttgaagttttttt 21444140  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  21444139 gttttggaccttcatgaattttg 21444117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 327
Target Start/End: Original strand, 442531 - 442658
Alignment:
Q  200 taagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagat 299  Q
    |||| |||||||||||||||  |||||||||||||  |||||| | |||||||| ||| | |||||         |||||||||||||||| || |||||    
T  442531 taagggttaatagtgttttagccccctgtaatataggtcatttccggttttaccccctataaaatattctttttagatttcgtccttgtaacttgaagat 442630  T
Q  300 ttttagttttggactttcaagaattttg 327  Q
    |||| ||||||||| |||| ||||||||    
T  442631 tttttgttttggaccttcatgaattttg 442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 13263871 - 13263992
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | || ||        |||||||||| ||||||||| |||||||||     
T  13263871 gttaatagtgttttacccccctgtaatataggtcatttccggttttacc-cctgtaaattattttttttggatttcgtctttgtaatttgaagatttttg 13263969  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  13263970 gttttggaccttcatgaattttg 13263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 15720931 - 15721053
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||||| ||| | |||||        |  ||||||||||||||||| | |||||||     
T  15720931 gttaatagtgttttacccccctgtaatataggtcatttccggttttaccccctgtaaaatattttttttgactttcgtccttgtaatttgatgatttttg 15721030  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  15721031 gttttggaccttcatgaattttg 15721053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 35158185 - 35158306
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||||| |||||||| ||| | ||| |        |||||||||||||||||||| |||||||||     
T  35158185 gttaatagtgttttat-cccctgtaatataggtcattttcggttttaccccctgtaaaaaatattttttggatttcgtccttgtaatttgaagatttttg 35158283  T
Q  305 gttttggactttcaagaattttg 327  Q
     |||||||| |||| ||||||||    
T  35158284 attttggaccttcatgaattttg 35158306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 17155610 - 17155731
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    ||||||||||||||   || ||||||||||| |||||||| || ||||||||| | |||||        |||||||||||||| ||||| |||||||||     
T  17155610 gttaatagtgttttgtccctctgtaatataagtcattttcggtcttacctcctgtaaaatattttttt-ggatttcgtccttgcaatttgaagatttttg 17155708  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  17155709 gttttggaccttcatgaattttg 17155731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 20055125 - 20055072
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  20055125 ggattttgtccttgtaatttgaagatttttggttttggactttcatgaattttg 20055072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 26254862 - 26254809
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  26254862 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 26254809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 30632068 - 30632121
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  30632068 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 30632121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 31307921 - 31307974
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  31307921 ggatttcgtccttgtaatttgaagattttttgttttggaccttcatgaattttg 31307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 36374216 - 36374269
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  36374216 ggatttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 36374269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 12005567 - 12005515
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||| || ||||||||| |||||||||||||| ||||||||    
T  12005567 gatttcgtccttgtaacttgaagattttttgttttggactttcatgaattttg 12005515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 21907534 - 21907585
Alignment:
Q  199 ttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||||| ||| |||||||||||||||  ||||||||||||||    
T  21907534 ttaagagttaatagtgcttttcacccctgtaatataggtcattttcagtttt 21907585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 3401875 - 3401925
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  3401875 tttcgtccttgtaatttgaagatttttggttttggaccttcatgaattttg 3401925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 21522143 - 21522021
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||| |  ||||| | ||| | |||||        ||||||||||||||||| || |||||||||     
T  21522143 gttaatagtgttttatccccctgtaatataggtcatttccgattttatcccctataaaatattttttttggatttcgtccttgtaacttgaagatttttt 21522044  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  21522043 gttttggaccttcatgaattttg 21522021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 47370154 - 47370276
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||  |||||||||||||  |||||| | |||||||| ||| | |||||         |||||||||||||||| || |||||||||     
T  47370154 gttaatagtgttttagccccctgtaatataggtcatttccggttttaccccctataaaatattctatttagatttcgtccttgtaacttgaagatttttt 47370253  T
Q  305 gttttggactttcaagaattttg 327  Q
     |||||||| |||| ||||||||    
T  47370254 attttggaccttcatgaattttg 47370276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 29105632 - 29105587
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  29105632 gttaatagtgtttttcacccctgtaatataggtcattttcagtttt 29105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 40938186 - 40938239
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||||| |||||||||||||||| ||||| ||| |||| ||||||||    
T  40938186 ggatttcgtccttataatttaaagatttttggttttagaccttcatgaattttg 40938239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 43707231 - 43707178
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||||||||||| ||||||||| ||||||| | |||| ||||||||    
T  43707231 ggatttcgtccttgtaatttgaagatttttggttttggcccttcatgaattttg 43707178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 3333080 - 3333028
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| |||||||||||||||  |||||||| |||||    
T  3333080 tttaagggttaatagtgtttttcacccctgtaatataggtcattttcggtttt 3333028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 38130906 - 38130954
Alignment:
Q  275 gatttcgtccttgtaatttaaagatttttagttttggactttcaagaat 323  Q
    ||||||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  38130906 gatttcgtccttgtaatttgaagatttttggttttggaccttcatgaat 38130954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 43741971 - 43742010
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  43741971 taatttaagggttaatagtgtttttcacccctgtaatata 43742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 813708 - 813662
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttc 244  Q
    |||||| |||||||||||||| |||||||||||||||  ||||||||    
T  813708 tttaagggttaatagtgtttttcacccctgtaatataggtcattttc 813662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 303
Target Start/End: Original strand, 5864446 - 5864544
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttt 303  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||| || ||| | |||||        | ||||| |||||||||||| |||||||||    
T  5864446 gttaatagtcttttacccccctgtaatataagtcatttccagtttttccccctgtaaaatagtttttttgaatttcatccttgtaatttgaagattttt 5864544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 14187967 - 14187845
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||||| |||| ||| ||| | |||||          |||||||||||||||||| || ||||||     
T  14187967 gttaatagtgttttacccccctgtaatataggtcattttcggtttgaccccctgtaaaatattttttttttatttcgtccttgtaatttgaatatttttg 14187868  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||| ||| || | ||||||||    
T  14187867 gttttagaccttaatgaattttg 14187845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 22317575 - 22317537
Alignment:
Q  206 ttaatagtgttttacacccctgtaatataactcattttc 244  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  22317575 ttaatagtgttttacacccctgtaatataagccattttc 22317537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 47668121 - 47668159
Alignment:
Q  196 aatttaagagttaatagtgttttacacccctgtaatata 234  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  47668121 aatttaagggttaatagtgtttttcacccctgtaatata 47668159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 11576867 - 11576822
Alignment:
Q  282 tccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    |||||||||||| ||||||||| ||||||||| |||| ||||||||    
T  11576867 tccttgtaatttgaagattttttgttttggaccttcatgaattttg 11576822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 11666758 - 11666803
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  11666758 gttaatagtgtttttcacccctgtaatatatgtcattttccgtttt 11666803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 11684228 - 11684273
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||| |||||||    
T  11684228 gttaatagtgtttttcacccctgtaatataggtcatttccagtttt 11684273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 22947658 - 22947621
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatata 234  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  22947658 atttaagggttaatagtgtttttcacccctgtaatata 22947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 23775175 - 23775130
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  23775175 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 23775130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 24919952 - 24919907
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  24919952 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 24919907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 28311396 - 28311343
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    ||||||| |||||||||| ||| |||||||||||||||  |||||| |||||||    
T  28311396 atttaagggttaatagtgcttttcacccctgtaatatatgtcatttccagtttt 28311343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 34116509 - 34116472
Alignment:
Q  197 atttaagagttaatagtgttttacacccctgtaatata 234  Q
    |||||||||||||||||||||| || ||||||||||||    
T  34116509 atttaagagttaatagtgtttttcatccctgtaatata 34116472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 34348218 - 34348173
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||| | |||||| |||||    
T  34348218 gttaatagtgtttttcacccctgtaatataagttattttcggtttt 34348173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 37101594 - 37101549
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  37101594 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 37101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 38192868 - 38192815
Alignment:
Q  274 ggatttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||||| ||| ||||| ||||||||| |||| ||||||||    
T  38192868 ggattccgtccttgtaatttgaagttttttggttttggaccttcatgaattttg 38192815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 38651786 - 38651831
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  38651786 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 38651831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 3223038 - 3223082
Alignment:
Q  199 ttaagagttaatagtgttttacacccctgtaatataactcatttt 243  Q
    ||||| |||||||||||||| |||||||||||||||  |||||||    
T  3223038 ttaagcgttaatagtgtttttcacccctgtaatataggtcatttt 3223082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 4098099 - 4098143
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttt 249  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||    
T  4098099 gttaatagtgtttttcacccctgtaatatatgtcattttcggttt 4098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 7881411 - 7881463
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| ||||| |||||||||  |||||| |||||||    
T  7881411 tttaagggttaatagtgtttttcacccttgtaatatatgtcatttccagtttt 7881463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 7967823 - 7967775
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggactttcaagaattt 325  Q
    |||| |||||||||||||||||||| |||||||| ||||| | ||||||    
T  7967823 tttcatccttgtaatttaaagatttctagttttgaacttttatgaattt 7967775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 277 - 313
Target Start/End: Original strand, 15994546 - 15994582
Alignment:
Q  277 tttcgtccttgtaatttaaagatttttagttttggac 313  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  15994546 tttcgtccttgtaatttgaagatttctagttttggac 15994582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 16986763 - 16986711
Alignment:
Q  198 tttaagagttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||| |||||||||||||| |||||||||||| ||  |||||||| |||||    
T  16986763 tttaagggttaatagtgtttttcacccctgtaatctaggtcattttcggtttt 16986711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 332057 - 332187
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaattta 294  Q
    ||||| |||||||||||||||||||| |||||||||||||  |||||||| ||||| || ||| | |||||        ||||||||||||||||||||     
T  332057 taattcaagagttaatagtgttttac-cccctgtaatataggtcattttcggttttccc-cctgtaaaatattttttttggatttcgtccttgtaatttg 332154  T
Q  295 aagatttttagttttggactttcaagaattttg 327  Q
    ||||||||| ||||||||| |||| ||||||||    
T  332155 aagatttttggttttggaccttcatgaattttg 332187  T

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Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 327
Target Start/End: Original strand, 212515 - 212636
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  ||||||||  ||||||| | | | |||||        |||||||||||||||||||| |||||||||     
T  212515 gttaatagtgttttac-cccctgtaatataggtcattttcgattttaccccgtgtaaaatattttatttggatttcgtccttgtaatttgaagatttttg 212613  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  212614 gttttggaccttcatgaattttg 212636  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 63404 - 63283
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagttttacctcctttgaaatannnnnnnnggatttcgtccttgtaatttaaagattttta 304  Q
    |||||||||||||||| |||||||||||||  |||||| | |||||| | ||| | |||||        |||||||||||||||||||| | |||||||     
T  63404 gttaatagtgttttac-cccctgtaatataggtcatttccggttttatcccctgtaaaatattttttttggatttcgtccttgtaatttgatgatttttg 63306  T
Q  305 gttttggactttcaagaattttg 327  Q
    ||||||||| |||| ||||||||    
T  63305 gttttggaccttcatgaattttg 63283  T

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Target: scaffold0121 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 12540 - 12591
Alignment:
Q  276 atttcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||| |||||||||||| ||||||||| ||||||||||| || ||||||||    
T  12540 atttcctccttgtaatttgaagatttttggttttggacttccatgaattttg 12591  T

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Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 12470 - 12523
Alignment:
Q  205 gttaatagtgttttacacc-cctgtaatataactcattttcagttttacctcct 257  Q
    |||||||||||||||| |  |||||||||||  |||||||||||||||||||||    
T  12470 gttaatagtgttttactcttcctgtaatataggtcattttcagttttacctcct 12523  T

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Target: scaffold0580 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 2185 - 2230
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  2185 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 2230  T

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Target: scaffold0580; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Original strand, 9924 - 9969
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  9924 gttaatagtgtttttcacccctgtaatataggtcattttcggtttt 9969  T

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Target: scaffold0098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 4243 - 4198
Alignment:
Q  205 gttaatagtgttttacacccctgtaatataactcattttcagtttt 250  Q
    |||||||||||||| |||||||||||||||  |||||||| |||||    
T  4243 gttaatagtgtttttcacccctgtaatatatgtcattttcggtttt 4198  T

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Target: scaffold0420 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 4538 - 4490
Alignment:
Q  195 taatttaagagttaatagtgttttacacccctgtaatataactcatttt 243  Q
    |||| |||| |||||||||||||| |||||||||||||||  |||||||    
T  4538 taatataagggttaatagtgtttttcacccctgtaatatatgtcatttt 4490  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 18900 - 18852
Alignment:
Q  279 tcgtccttgtaatttaaagatttttagttttggactttcaagaattttg 327  Q
    ||||||||||| ||| ||||||||| ||||||||| |||| ||||||||    
T  18900 tcgtccttgtattttgaagatttttggttttggaccttcatgaattttg 18852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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