View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4005_low_62 (Length: 245)
Name: NF4005_low_62
Description: NF4005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4005_low_62 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 32685765 - 32685523
Alignment:
| Q |
3 |
tagcataggtcaattcacctaatccatatcaactttcttgattttcagccatgaaatttcaggtacacctaatgacctaaataaaaagaaattcatagct |
102 |
Q |
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| T |
32685765 |
tagcttaggtcaattcacctaatccatatcaactttcttgattttcagccatgaaatttcaggtacacctaatgacctaaataaaaagaaattcatagct |
32685666 |
T |
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| Q |
103 |
gtgtcctcataataatgtacgttattttagatatttatctaataaaaactatattagtgaaatagtcaacagccagtgaaattattattagctatttgtt |
202 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32685665 |
gtgtccacataataatgtacgttattttagatatttatctaataaaaactatattagtgaaatagtcaacagccagtgaaattattattagctatttgtt |
32685566 |
T |
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| Q |
203 |
nnnnnnntggtaatagacttttcttttggctattctttagtac |
245 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
32685565 |
aaaaaaatggtaatagacttttcttttggctattctttagtac |
32685523 |
T |
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