View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4006_low_5 (Length: 277)
Name: NF4006_low_5
Description: NF4006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4006_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 262
Target Start/End: Complemental strand, 46306126 - 46305883
Alignment:
| Q |
15 |
atgaacaagaaattataaatgaagaaagaacaacactaatcttactaaataaacaaaattacactggaaacaaaaactaaaggtgacannnnnnnnagac |
114 |
Q |
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| T |
46306126 |
atgaacaagaaattataaatgaagaaaggacaacactaatcttactaaataaacaaaattacactggaaacaaaaactaaaggtgacattttttttagac |
46306027 |
T |
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| Q |
115 |
aattatgtttgcaaatatattcatccattagagtttaagcagaattcaatcatgtcttgccacatctttaaatggatatgacaatgtgtaaaacaacttt |
214 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
46306026 |
aattatgtttgcaaatatat----ccattagagtttaagcagaattcaatcatgtcttgccacatctttaaatggatatgacaatgtgtaaaataacttt |
46305931 |
T |
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| Q |
215 |
acaaggatagtgagtacaaatcaaatgagtaacaaaccttgagatagg |
262 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
46305930 |
acaaggatagtgagtacaaatgaaatgagtaacaaaccttgagatagg |
46305883 |
T |
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