View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4010_high_8 (Length: 329)
Name: NF4010_high_8
Description: NF4010
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4010_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 315
Target Start/End: Original strand, 14443318 - 14443613
Alignment:
| Q |
20 |
cgggtcacccctgttaaaaaataataatattaagagtttaattaatatatatgtaaagagtttttgagtgaaaatgacttgatataaaaagtttaggaga |
119 |
Q |
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| T |
14443318 |
cgggtcacccctgttaaaaaataataatattaagagtttaattaatatatatgtaaagagtttttgagtgaaaatgacttgatataaaaagtttaggaga |
14443417 |
T |
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| Q |
120 |
ataaaatgacttgatataaaaaagaaagataatttacttttcaacattgacaaaggaattgggtgagaaagtggagagggannnnnnngtgccattgggt |
219 |
Q |
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| T |
14443418 |
ataaaatgacttgatataaaaaagaaagataatttacttttcaacattgacaaaggaattgggtgagaaagtggagagggatttttttgtgccattgggt |
14443517 |
T |
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| Q |
220 |
gagaaaggagacgaaccattagtagtagcaaccaccatattttgtgtctcactatcactcttgattggtgtttggtttatttttatttattttgcc |
315 |
Q |
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| T |
14443518 |
gagaaaggagaagaaacattagtagtagcaaccaccatattttgtgtctcactatcactcttgattggtgtttggtttatttttatttattttgcc |
14443613 |
T |
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