View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4011_high_14 (Length: 273)

Name: NF4011_high_14
Description: NF4011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4011_high_14
NF4011_high_14
[»] chr6 (39 HSPs)
chr6 (19-173)||(12164131-12164285)
chr6 (19-173)||(12163873-12164027)
chr6 (19-154)||(12210919-12211054)
chr6 (99-173)||(12163638-12163712)
chr6 (99-173)||(12163479-12163553)
chr6 (99-173)||(12163290-12163364)
chr6 (99-173)||(12210741-12210815)
chr6 (224-268)||(12164336-12164380)
chr6 (117-173)||(12163716-12163772)
chr6 (102-173)||(12164313-12164384)
chr6 (18-68)||(12211170-12211220)
chr6 (19-68)||(12210868-12210917)
chr6 (117-172)||(12163368-12163423)
chr6 (21-68)||(12212842-12212889)
chr6 (66-172)||(12163476-12163582)
chr6 (117-166)||(12163209-12163258)
chr6 (123-172)||(12163344-12163393)
chr6 (102-151)||(12211098-12211147)
chr6 (117-169)||(12163557-12163609)
chr6 (225-268)||(12163317-12163360)
chr6 (19-61)||(12163825-12163867)
chr6 (112-169)||(12179156-12179216)
chr6 (111-161)||(12210903-12210953)
chr6 (19-61)||(12211123-12211165)
chr6 (19-68)||(12164080-12164129)
chr6 (19-68)||(12164368-12164417)
chr6 (19-68)||(12179360-12179409)
chr6 (19-68)||(12179411-12179460)
chr6 (19-68)||(12192339-12192388)
chr6 (19-64)||(12192390-12192435)
chr6 (19-68)||(12192441-12192490)
chr6 (19-68)||(12192492-12192541)
chr6 (225-265)||(12163566-12163606)
chr6 (110-166)||(12163679-12163735)
chr6 (225-265)||(12163725-12163765)
chr6 (225-253)||(12164079-12164107)
chr6 (111-151)||(12192323-12192363)
chr6 (109-161)||(12210850-12210902)
chr6 (19-67)||(12211324-12211372)


Alignment Details
Target: chr6 (Bit Score: 151; Significance: 6e-80; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 12164131 - 12164285
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccatcaccacc 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12164131 tttacaagtataagtctcctcctccacccgtcaattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccatcaccacc 12164230  T
Q  119 accgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12164231 accgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 12164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 12163873 - 12164027
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccatcaccacc 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12163873 tttacaagtataagtctcctcctccacctgtctattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccatcaccacc 12163972  T
Q  119 accgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12163973 accaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatct 12164027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 12210919 - 12211054
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccaccatataagtacaaatctccaccacctcctccttataagtacccatcaccacc 118  Q
    ||||||||||||| |||||||||||||| || || ||||||||||||||||| |||||   |||||||||||||||||| || |||||| ||||||||||    
T  12210919 tttacaagtataaatctcctcctccaccagtttactcaccacctccaccatacaagtattcatctccaccacctcctccgtacaagtactcatcaccacc 12211018  T
Q  119 accgccagtttacaagtacaaatcacctcctcctcc 154  Q
    ||| ||||| |||||||| || ||||||||||||||    
T  12211019 accaccagtctacaagtataagtcacctcctcctcc 12211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 12163638 - 12163712
Alignment:
Q  99 tataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    ||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12163638 tataaatacccatctcccccaccaccagtttacaagtacaaatcacctcctcctccagtttacaagtataaatct 12163712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 12163479 - 12163553
Alignment:
Q  99 tataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| || || || |||||||||||||||    
T  12163479 tataaatacccatctccaccaccgccagtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatct 12163553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 12163290 - 12163364
Alignment:
Q  99 tataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||    
T  12163290 tataaatatccatctccaccaccaccagtttacaagtacaagtcacctcctccaccagtttacaagtataaatct 12163364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 12210741 - 12210815
Alignment:
Q  99 tataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    |||||||| | ||| || ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12210741 tataagtatcaatctcccccaccaccagtttacaagtacaagtcacctcctcccccagtttacaagtacaaatct 12210815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 12164336 - 12164380
Alignment:
Q  224 cgtttacaaatataagtcccctcctccaccagtttacaagtataa 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12164336 cgtttacaaatataagtcccctcctccaccagtttacaagtataa 12164380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 12163716 - 12163772
Alignment:
Q  117 ccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||    
T  12163716 ccaccaccagtttacaagtataagtcacctcctcccccagtttacaagtacaaatct 12163772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 12164313 - 12164384
Alignment:
Q  102 aagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatct 173  Q
    |||||||||||||||||||| || |||||||| || || || |||||||| |||||||||||||| ||||||    
T  12164313 aagtacccatcaccaccaccacccgtttacaaatataagtcccctcctccaccagtttacaagtataaatct 12164384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12211170 - 12211220
Alignment:
Q  18 atttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  12211170 atttacaagtataagtcacctcctccacctgtctactcaccacctccacca 12211220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12210868 - 12210917
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    |||||||||||||||||||||||||||| || || |||||||||||||||    
T  12210868 tttacaagtataagtctcctcctccacctgtttactcaccacctccacca 12210917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 12163368 - 12163423
Alignment:
Q  117 ccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatc 172  Q
    ||||| ||||||||||||||||||||||||||||| || || |||||||| |||||    
T  12163368 ccaccaccagtttacaagtacaaatcacctcctccaccggtgtacaagtataaatc 12163423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 12212842 - 12212889
Alignment:
Q  21 tacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  12212842 tacaagtataagtctcctcccccacctgtctactcaccacctccacca 12212889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 12163476 - 12163582
Alignment:
Q  66 ccatataagtacaaatctccaccacctcctccttataagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagt 165  Q
    |||||||| |||  |||||||||||| ||   ||| ||||||  |||||| ||||| || || |||||||||||||| ||||| || |||||||||||||    
T  12163476 ccatataaatacccatctccaccaccgccagtttacaagtacaaatcacctccaccaccggtgtacaagtacaaatctcctccaccaccagtttacaagt 12163575  T
Q  166 acaaatc 172  Q
    | |||||    
T  12163576 ataaatc 12163582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 12163209 - 12163258
Alignment:
Q  117 ccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagta 166  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || |||||    
T  12163209 ccacctccagtttacaagtacaaatcacctcctccaccagtgtataagta 12163258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 12163344 - 12163393
Alignment:
Q  123 ccagtttacaagtacaaatcacctcctcctccagtttacaagtacaaatc 172  Q
    |||||||||||||| ||||| ||||| || ||||||||||||||||||||    
T  12163344 ccagtttacaagtataaatctcctccaccaccagtttacaagtacaaatc 12163393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 12211098 - 12211147
Alignment:
Q  102 aagtacccatcaccaccaccgccagtttacaagtacaaatcacctcctcc 151  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||||||    
T  12211098 aagtacccatctccaccacccccagtttacaagtataaatctcctcctcc 12211147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 12163557 - 12163609
Alignment:
Q  117 ccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagtacaa 169  Q
    ||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||    
T  12163557 ccaccaccagtttacaagtataaatcccctcctccaccagtgtacaagtacaa 12163609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12163317 - 12163360
Alignment:
Q  225 gtttacaaatataagtcccctcctccaccagtttacaagtataa 268  Q
    |||||||| || ||||| ||||||||||||||||||||||||||    
T  12163317 gtttacaagtacaagtcacctcctccaccagtttacaagtataa 12163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 12163825 - 12163867
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacc 61  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||    
T  12163825 tttacaagtataagtctccccctccacctgtctactcaccacc 12163867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 12179156 - 12179216
Alignment:
Q  112 caccaccaccgccagtttacaagtacaaat---cacctcctcctccagtttacaagtacaa 169  Q
    |||||||||| ||||||||||||||||| |   ||||||| || |||||||||||||||||    
T  12179156 caccaccaccaccagtttacaagtacaagtccccacctccaccaccagtttacaagtacaa 12179216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 12210903 - 12210953
Alignment:
Q  111 tcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttac 161  Q
    |||||||| || |||||||||||||| ||||| |||||||| |||||||||    
T  12210903 tcaccacctccaccagtttacaagtataaatctcctcctccaccagtttac 12210953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 12211123 - 12211165
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacc 61  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||    
T  12211123 tttacaagtataaatctcctcctccacctgtctactcaccacc 12211165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12164080 - 12164129
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    ||||||| |||||||| ||||||||||| || || |||||||||||||||    
T  12164080 tttacaaatataagtcccctcctccacctgtatactcaccacctccacca 12164129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12164368 - 12164417
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    ||||||||||||| |||||||||||||| ||  | |||||||||||||||    
T  12164368 tttacaagtataaatctcctcctccacctgttcactcaccacctccacca 12164417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12179360 - 12179409
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    |||||| ||| ||||| || ||||| ||||||||||||||||||||||||    
T  12179360 tttacacgtacaagtcaccacctcctcccgtctattcaccacctccacca 12179409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12179411 - 12179460
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    ||||||||||||||||||||||||| || |  || |||||||||||||||    
T  12179411 tttacaagtataagtctcctcctcctcctgcttactcaccacctccacca 12179460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12192339 - 12192388
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    |||||||||| ||||| || |||||||| ||||| |||||||||||||||    
T  12192339 tttacaagtacaagtcaccccctccacctgtctactcaccacctccacca 12192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 12192390 - 12192435
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctcc 64  Q
    |||||||||| ||||| || |||||||||||||| |||||||||||    
T  12192390 tttacaagtacaagtccccacctccacccgtctactcaccacctcc 12192435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12192441 - 12192490
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    |||| ||||| ||||| || ||||| ||||||||||||||||||||||||    
T  12192441 tttataagtacaagtcaccacctcctcccgtctattcaccacctccacca 12192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12192492 - 12192541
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacca 68  Q
    ||||||||||||||||||||||||| || |  || |||||||||||||||    
T  12192492 tttacaagtataagtctcctcctcctcctgcatactcaccacctccacca 12192541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 12163566 - 12163606
Alignment:
Q  225 gtttacaaatataagtcccctcctccaccagtttacaagta 265  Q
    |||||||| ||||| ||||||||||||||||| ||||||||    
T  12163566 gtttacaagtataaatcccctcctccaccagtgtacaagta 12163606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 12163679 - 12163735
Alignment:
Q  110 atcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttacaagta 166  Q
    |||||| || || |||||||||||||| ||||| ||||| || ||||||||||||||    
T  12163679 atcacctcctcctccagtttacaagtataaatctcctccaccaccagtttacaagta 12163735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 12163725 - 12163765
Alignment:
Q  225 gtttacaaatataagtcccctcctccaccagtttacaagta 265  Q
    |||||||| |||||||| |||||||| ||||||||||||||    
T  12163725 gtttacaagtataagtcacctcctcccccagtttacaagta 12163765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 253
Target Start/End: Original strand, 12164079 - 12164107
Alignment:
Q  225 gtttacaaatataagtcccctcctccacc 253  Q
    |||||||||||||||||||||||||||||    
T  12164079 gtttacaaatataagtcccctcctccacc 12164107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 12192323 - 12192363
Alignment:
Q  111 tcaccaccaccgccagtttacaagtacaaatcacctcctcc 151  Q
    ||||||||||| ||||||||||||||||| ||||| |||||    
T  12192323 tcaccaccaccaccagtttacaagtacaagtcaccccctcc 12192363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 12210850 - 12210902
Alignment:
Q  109 catcaccaccaccgccagtttacaagtacaaatcacctcctcctccagtttac 161  Q
    ||||||||||||| |||||||||||||| || || |||||||| || ||||||    
T  12210850 catcaccaccaccaccagtttacaagtataagtctcctcctccacctgtttac 12210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 12211324 - 12211372
Alignment:
Q  19 tttacaagtataagtctcctcctccacccgtctattcaccacctccacc 67  Q
    ||||||| |||||||| ||||| ||||| ||||| ||||||||||||||    
T  12211324 tttacaaatataagtcacctcccccacctgtctactcaccacctccacc 12211372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University