View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4011_high_6 (Length: 455)
Name: NF4011_high_6
Description: NF4011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4011_high_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 451; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 36093482 - 36093028
Alignment:
| Q |
1 |
ttcaagcatttcttggtcagtgaatatgcttcctggtgagctcaagaacactgtacgtggaactggaggagaccataatccacttttttcataatcaaag |
100 |
Q |
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| T |
36093482 |
ttcaagcatttcttggtcagtgaatatgcttcctggtgagctcaagaacactgtacgtggaactggaggagaccataatccacttttttcataatcaaag |
36093383 |
T |
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| Q |
101 |
tcgaattgcggttcatcgtagaatttcagcagcaacctatcagagacagactttgaaacaatttgaatcttctgtggatatgtttcatgggaaatgtggt |
200 |
Q |
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| T |
36093382 |
tcgaattgcggttcatcgtagaatttcagcagcaacctatcagagacagactttgaaacaatttgaatcttctgtggatatgtttcatgagaaatgtggt |
36093283 |
T |
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| Q |
201 |
tttcagctatcatttcactcagggttatgagaactataattgaaaatatgaagaatgaatgataatatgccaatgtagtagtagtagtgcatgtgattga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36093282 |
tttcagctatcatttcactcagggttatgagaactataattgaaaatatgaagaatgaatgataatatgccaatgtagtagtagtagtgcatgtgattga |
36093183 |
T |
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| Q |
301 |
gataatgaaaatacaggttgggagtgatggtagcatttgtaaaaaggagacaaatttgaagaggggctaatgatgcagaaggtgggaactttagataagg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36093182 |
gataatgaaaatacaggttgggagtgatggtagcatttgtaaaaaggagacaaatttgaagaggggctaatgatgcagaaggtgggaactttagataagg |
36093083 |
T |
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| Q |
401 |
acgtgtatggctgtatgcaattatagataggtcgtgagcaccatcatatgatgat |
455 |
Q |
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| T |
36093082 |
acgtgtatggctgtatgcaattatagataggtcgtgagcaccatcatatgatgat |
36093028 |
T |
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